AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1100700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1100700 MtrunA17_Chr7g0217741 95.527 313 10 2 1 313 1 309 0.0 610
Msa1100700 MtrunA17_Chr6g0453471 61.067 375 66 11 1 313 1 357 3.63e-129 372
Msa1100700 MtrunA17_Chr4g0042671 79.661 177 32 2 1 173 1 177 7.67e-100 299
Msa1100700 MtrunA17_Chr8g0349261 63.934 183 63 3 1 180 1 183 3.49e-78 240
Msa1100700 MtrunA17_Chr3g0115821 60.894 179 64 2 1 173 1 179 2.79e-76 237
Msa1100700 MtrunA17_Chr2g0281071 76.923 130 29 1 1 129 1 130 1.86e-75 235
Msa1100700 MtrunA17_Chr4g0048511 75.373 134 32 1 1 133 1 134 2.49e-75 235
Msa1100700 MtrunA17_Chr4g0039971 57.368 190 70 2 1 181 2 189 3.17e-74 232
Msa1100700 MtrunA17_Chr1g0203411 63.314 169 55 2 1 168 1 163 4.41e-72 224
Msa1100700 MtrunA17_Chr2g0323411 71.642 134 38 0 1 134 1 134 1.18e-71 224
Msa1100700 MtrunA17_Chr5g0410961 66.207 145 45 1 1 145 1 141 2.24e-69 219
Msa1100700 MtrunA17_Chr5g0417821 61.842 152 54 1 10 161 5 152 9.20e-68 213
Msa1100700 MtrunA17_Chr5g0395281 54.404 193 78 3 1 183 1 193 1.65e-67 213
Msa1100700 MtrunA17_Chr4g0057031 68.702 131 41 0 1 131 1 131 6.34e-66 208
Msa1100700 MtrunA17_Chr4g0037141 58.750 160 62 1 1 160 1 156 1.49e-65 207
Msa1100700 MtrunA17_Chr5g0434571 71.094 128 37 0 1 128 37 164 2.54e-64 206
Msa1100700 MtrunA17_Chr3g0110351 71.654 127 36 0 1 127 1 127 3.84e-64 204
Msa1100700 MtrunA17_Chr7g0217221 45.038 262 124 8 1 257 1 247 1.09e-63 202
Msa1100700 MtrunA17_Chr3g0103281 69.531 128 39 0 1 128 1 128 2.67e-63 203
Msa1100700 MtrunA17_Chr6g0452271 50.811 185 82 2 1 177 1 184 2.87e-63 203
Msa1100700 MtrunA17_Chr1g0193371 69.697 132 40 0 1 132 1 132 5.76e-63 203
Msa1100700 MtrunA17_Chr1g0193801 63.514 148 51 1 1 148 1 145 1.88e-62 202
Msa1100700 MtrunA17_Chr3g0131121 63.571 140 46 1 1 135 1 140 4.42e-62 199
Msa1100700 MtrunA17_Chr7g0254411 69.600 125 36 1 1 123 1 125 2.77e-61 198
Msa1100700 MtrunA17_Chr4g0060721 53.714 175 70 3 1 175 2 165 3.05e-61 198
Msa1100700 MtrunA17_Chr7g0270891 66.667 132 44 0 1 132 1 132 3.11e-61 199
Msa1100700 MtrunA17_Chr7g0228891 61.806 144 55 0 1 144 1 144 4.31e-61 196
Msa1100700 MtrunA17_Chr1g0211161 48.000 225 102 3 3 212 4 228 4.37e-61 194
Msa1100700 MtrunA17_Chr3g0092401 56.024 166 61 3 1 166 2 155 6.41e-61 196
Msa1100700 MtrunA17_Chr8g0385321 65.625 128 44 0 1 128 1 128 7.58e-61 196
Msa1100700 MtrunA17_Chr7g0274581 66.949 118 39 0 1 118 1 118 1.14e-60 192
Msa1100700 MtrunA17_Chr4g0058631 64.706 136 48 0 1 136 1 136 2.44e-60 196
Msa1100700 MtrunA17_Chr1g0187761 70.339 118 35 0 1 118 1 118 2.54e-60 193
Msa1100700 MtrunA17_Chr5g0435101 65.600 125 43 0 3 127 2 126 6.33e-60 191
Msa1100700 MtrunA17_Chr7g0261281 71.552 116 33 0 1 116 1 116 7.46e-60 192
Msa1100700 MtrunA17_Chr3g0121241 67.742 124 40 0 5 128 35 158 1.58e-59 192
Msa1100700 MtrunA17_Chr1g0167691 72.414 116 32 0 1 116 1 116 1.76e-59 191
Msa1100700 MtrunA17_Chr1g0167661 73.276 116 31 0 1 116 1 116 2.22e-59 191
Msa1100700 MtrunA17_Chr7g0271241 68.702 131 41 0 1 131 1 131 1.12e-58 192
Msa1100700 MtrunA17_Chr3g0117091 52.514 179 71 1 1 165 1 179 1.73e-58 191
Msa1100700 MtrunA17_Chr4g0068061 70.690 116 34 0 1 116 1 116 2.92e-58 190
Msa1100700 MtrunA17_Chr8g0346561 68.644 118 37 0 1 118 1 118 2.51e-57 187
Msa1100700 MtrunA17_Chr7g0275911 68.966 116 36 0 1 116 1 116 3.55e-57 185
Msa1100700 MtrunA17_Chr2g0309911 60.000 135 49 1 6 140 5 134 7.27e-56 183
Msa1100700 MtrunA17_Chr6g0453211 69.369 111 34 0 1 111 1 111 5.92e-55 181
Msa1100700 MtrunA17_Chr7g0247131 67.742 124 39 1 44 166 10 133 9.49e-55 179
Msa1100700 MtrunA17_Chr4g0070611 67.227 119 39 0 1 119 1 119 2.12e-54 179
Msa1100700 MtrunA17_Chr4g0070641 67.227 119 39 0 1 119 1 119 2.57e-54 174
Msa1100700 MtrunA17_Chr1g0194951 62.791 129 48 0 1 129 1 129 3.96e-54 181
Msa1100700 MtrunA17_Chr7g0264641 57.432 148 59 3 1 145 1 147 8.41e-54 177
Msa1100700 MtrunA17_Chr2g0311221 65.455 110 38 0 2 111 4 113 8.45e-54 178
Msa1100700 MtrunA17_Chr2g0323351 66.949 118 39 0 1 118 1 118 1.11e-53 176
Msa1100700 MtrunA17_Chr4g0028311 61.538 130 49 1 1 129 1 130 3.01e-53 177
Msa1100700 MtrunA17_Chr4g0042611 86.364 88 12 0 1 88 1 88 3.21e-53 169
Msa1100700 MtrunA17_Chr4g0044421 62.400 125 46 1 3 126 2 126 2.30e-52 170
Msa1100700 MtrunA17_Chr3g0135311 56.643 143 61 1 1 142 1 143 2.82e-52 175
Msa1100700 MtrunA17_Chr2g0330041 49.693 163 72 2 1 153 1 163 4.04e-52 176
Msa1100700 MtrunA17_Chr8g0387421 61.017 118 46 0 1 118 1 118 7.52e-52 173
Msa1100700 MtrunA17_Chr8g0342521 60.163 123 49 0 1 123 1 123 2.16e-51 173
Msa1100700 MtrunA17_Chr5g0400821 64.957 117 40 1 1 116 1 117 3.15e-51 171
Msa1100700 MtrunA17_Chr1g0152011 64.957 117 40 1 1 116 1 117 3.19e-51 172
Msa1100700 MtrunA17_Chr1g0151941 54.286 140 62 2 1 139 1 139 3.52e-51 169
Msa1100700 MtrunA17_Chr8g0342541 59.350 123 50 0 1 123 1 123 9.11e-51 171
Msa1100700 MtrunA17_Chr2g0327351 67.568 111 35 1 1 110 1 111 2.34e-50 169
Msa1100700 MtrunA17_Chr4g0022931 62.393 117 43 1 1 116 1 117 1.19e-49 166
Msa1100700 MtrunA17_Chr7g0269831 68.103 116 37 0 1 116 1 116 2.24e-49 167
Msa1100700 MtrunA17_Chr5g0397231 62.727 110 41 0 1 110 1 110 3.74e-49 167
Msa1100700 MtrunA17_Chr1g0203441 68.868 106 33 0 13 118 14 119 5.51e-49 164
Msa1100700 MtrunA17_Chr4g0032401 63.964 111 40 0 12 122 17 127 1.23e-48 165
Msa1100700 MtrunA17_Chr4g0022911 50.000 146 71 2 1 144 1 146 1.23e-48 164
Msa1100700 MtrunA17_Chr2g0328771 64.815 108 38 0 12 119 20 127 1.33e-48 165
Msa1100700 MtrunA17_Chr4g0022901 62.069 116 43 1 1 115 1 116 1.69e-48 163
Msa1100700 MtrunA17_Chr4g0054391 61.818 110 41 1 1 109 1 110 8.96e-47 159
Msa1100700 MtrunA17_Chr4g0022881 60.526 114 45 0 1 114 1 114 9.39e-47 157
Msa1100700 MtrunA17_Chr3g0088461 65.741 108 37 0 9 116 19 126 1.39e-46 160
Msa1100700 MtrunA17_Chr4g0072751 63.063 111 40 1 1 110 1 111 2.33e-46 160
Msa1100700 MtrunA17_Chr8g0342481 52.899 138 63 2 1 137 1 137 1.32e-45 159
Msa1100700 MtrunA17_Chr4g0022891 58.407 113 47 0 1 113 1 113 1.72e-44 152
Msa1100700 MtrunA17_Chr6g0470971 60.714 112 44 0 7 118 9 120 2.27e-44 152
Msa1100700 MtrunA17_Chr4g0055981 53.571 140 64 1 9 148 52 190 8.02e-44 150
Msa1100700 MtrunA17_Chr6g0487491 55.556 126 47 2 1 117 1 126 1.54e-43 150
Msa1100700 MtrunA17_Chr1g0186061 63.107 103 38 0 13 115 21 123 8.30e-43 148
Msa1100700 MtrunA17_Chr1g0168661 63.107 103 38 0 13 115 22 124 1.39e-42 147
Msa1100700 MtrunA17_Chr7g0228231 59.813 107 43 0 12 118 14 120 1.44e-41 143
Msa1100700 MtrunA17_Chr2g0294811 68.478 92 29 0 1 92 1 92 2.04e-41 140
Msa1100700 MtrunA17_Chr6g0450101 53.719 121 54 1 1 119 1 121 3.59e-41 142
Msa1100700 MtrunA17_Chr8g0343831 59.322 118 44 1 1 118 1 114 3.98e-41 143
Msa1100700 MtrunA17_Chr1g0209661 56.522 115 50 0 8 122 23 137 4.27e-41 145
Msa1100700 MtrunA17_Chr1g0194291 56.140 114 50 0 9 122 18 131 4.71e-41 143
Msa1100700 MtrunA17_Chr3g0080861 57.143 112 47 1 10 121 35 145 7.98e-41 149
Msa1100700 MtrunA17_Chr8g0354661 58.491 106 44 0 10 115 35 140 3.30e-40 147
Msa1100700 MtrunA17_Chr1g0194301 54.955 111 50 0 12 122 33 143 4.57e-40 141
Msa1100700 MtrunA17_Chr3g0099131 57.547 106 45 0 10 115 39 144 5.10e-40 147
Msa1100700 MtrunA17_Chr2g0322521 59.813 107 43 0 9 115 26 132 5.87e-40 144
Msa1100700 MtrunA17_Chr7g0240821 48.120 133 69 0 16 148 5 137 7.20e-40 139
Msa1100700 MtrunA17_Chr1g0180391 60.000 105 42 0 12 116 19 123 1.03e-39 139
Msa1100700 MtrunA17_Chr5g0434911 54.054 111 51 0 7 117 16 126 1.11e-38 137
Msa1100700 MtrunA17_Chr7g0220341 57.273 110 45 1 10 117 23 132 1.49e-38 137
Msa1100700 MtrunA17_Chr1g0154031 43.210 162 87 3 12 172 76 233 1.74e-38 140
Msa1100700 MtrunA17_Chr5g0434931 55.140 107 48 0 11 117 34 140 2.42e-38 137
Msa1100700 MtrunA17_Chr5g0434831 56.075 107 47 0 11 117 6 112 5.84e-37 130
Msa1100700 MtrunA17_Chr4g0068921 53.043 115 54 0 8 122 20 134 7.14e-37 130
Msa1100700 MtrunA17_Chr5g0395221 65.909 88 30 0 1 88 1 88 8.47e-37 127
Msa1100700 MtrunA17_Chr2g0323321 58.095 105 43 1 1 105 1 104 1.53e-36 127
Msa1100700 MtrunA17_Chr7g0228991 55.140 107 48 0 11 117 28 134 1.79e-36 132
Msa1100700 MtrunA17_Chr8g0342511 62.069 87 33 0 1 87 1 87 1.80e-36 126
Msa1100700 MtrunA17_Chr2g0293911 53.043 115 54 0 8 122 20 134 2.22e-36 133
Msa1100700 MtrunA17_Chr8g0342531 61.798 89 34 0 1 89 1 89 3.31e-36 128
Msa1100700 MtrunA17_Chr8g0360111 56.863 102 44 0 11 112 24 125 6.29e-36 130
Msa1100700 MtrunA17_Chr2g0327821 53.846 104 48 0 12 115 6 109 1.04e-35 129
Msa1100700 MtrunA17_Chr1g0192411 41.463 164 87 4 1 161 1 158 6.62e-35 130
Msa1100700 MtrunA17_Chr4g0030881 52.727 110 45 1 13 115 8 117 9.09e-35 127
Msa1100700 MtrunA17_Chr5g0434841 53.774 106 49 0 11 116 19 124 1.32e-34 128
Msa1100700 MtrunA17_Chr5g0440781 47.788 113 57 2 13 124 13 124 3.15e-33 120
Msa1100700 MtrunA17_Chr5g0440761 47.788 113 57 2 13 124 13 124 1.34e-32 121
Msa1100700 MtrunA17_Chr4g0042621 69.663 89 23 2 89 173 15 103 1.36e-32 123
Msa1100700 MtrunA17_Chr5g0441141 47.788 113 57 2 13 124 13 124 1.50e-32 121
Msa1100700 MtrunA17_Chr8g0342461 56.667 90 38 1 1 89 1 90 1.84e-32 117
Msa1100700 MtrunA17_Chr8g0342471 56.667 90 38 1 1 89 1 90 5.49e-32 116
Msa1100700 MtrunA17_Chr8g0334881 47.706 109 55 2 12 119 10 117 2.85e-31 119
Msa1100700 MtrunA17_Chr5g0441131 47.414 116 59 2 10 124 7 121 3.40e-31 115
Msa1100700 MtrunA17_Chr4g0013361 49.074 108 54 1 8 114 6 113 2.76e-30 116
Msa1100700 MtrunA17_Chr6g0454921 46.847 111 58 1 14 124 15 124 3.00e-30 114
Msa1100700 MtrunA17_Chr3g0099141 51.724 87 42 0 8 94 36 122 3.12e-30 111
Msa1100700 MtrunA17_Chr3g0093811 56.044 91 40 0 44 134 14 104 3.62e-30 115
Msa1100700 MtrunA17_Chr5g0401731 48.624 109 55 1 14 122 15 122 4.12e-30 116
Msa1100700 MtrunA17_Chr3g0133601 51.402 107 51 1 9 115 32 137 2.12e-29 112
Msa1100700 MtrunA17_Chr4g0008551 47.788 113 54 2 14 126 38 145 3.48e-28 111
Msa1100700 MtrunA17_Chr4g0053431 49.020 102 51 1 14 115 5 105 1.41e-27 108
Msa1100700 MtrunA17_Chr7g0238631 48.571 105 53 1 12 116 111 214 2.99e-26 108
Msa1100700 MtrunA17_Chr5g0429661 49.000 100 48 2 12 110 120 217 5.89e-26 105
Msa1100700 MtrunA17_Chr7g0229101 64.286 70 25 0 44 113 4 73 3.61e-25 100
Msa1100700 MtrunA17_Chr7g0229131 58.108 74 31 0 44 117 4 77 1.63e-24 97.4
Msa1100700 MtrunA17_Chr4g0058991 43.243 111 62 1 8 118 203 312 2.29e-24 102
Msa1100700 MtrunA17_Chr3g0117511 42.342 111 63 1 8 118 177 286 6.00e-24 101
Msa1100700 MtrunA17_Chr5g0434901 61.765 68 26 0 46 113 7 74 3.58e-23 92.4
Msa1100700 MtrunA17_Chr6g0453751 48.913 92 38 2 11 93 19 110 6.67e-23 92.0
Msa1100700 MtrunA17_Chr5g0425591 48.235 85 43 1 10 93 7 91 8.16e-23 90.5
Msa1100700 MtrunA17_Chr3g0139671 40.952 105 61 1 12 116 83 186 4.92e-22 96.7
Msa1100700 MtrunA17_Chr6g0480581 42.574 101 57 1 14 114 4 103 6.96e-22 92.4
Msa1100700 MtrunA17_Chr5g0437321 44.444 99 54 1 14 112 19 116 1.25e-21 92.8
Msa1100700 MtrunA17_Chr6g0460661 37.705 122 74 2 14 135 16 135 2.18e-21 89.0
Msa1100700 MtrunA17_Chr6g0460671 32.558 172 108 4 14 184 99 263 2.31e-21 92.8
Msa1100700 MtrunA17_Chr1g0157731 40.000 105 62 1 12 116 89 192 3.75e-21 94.0
Msa1100700 MtrunA17_Chr1g0157731 31.132 106 71 2 14 118 39 143 1.69e-11 65.1
Msa1100700 MtrunA17_Chr4g0042501 41.739 115 59 3 2 115 98 205 8.40e-21 92.0
Msa1100700 MtrunA17_Chr5g0417621 42.308 104 57 2 14 116 134 235 1.40e-20 91.7
Msa1100700 MtrunA17_Chr7g0228531 39.450 109 64 2 10 118 216 322 3.64e-20 90.5
Msa1100700 MtrunA17_Chr3g0125801 42.157 102 58 1 14 115 16 116 4.04e-20 88.6
Msa1100700 MtrunA17_Chr5g0395231 30.418 263 123 13 78 300 5 247 1.92e-19 85.9
Msa1100700 MtrunA17_Chr7g0254261 41.525 118 62 3 3 115 74 189 6.02e-19 86.3
Msa1100700 MtrunA17_Chr5g0397841 42.857 98 55 1 12 109 108 204 8.23e-19 86.7
Msa1100700 MtrunA17_Chr7g0228401 44.186 86 47 1 25 110 290 374 1.78e-17 82.8
Msa1100700 MtrunA17_Chr1g0177901 47.126 87 42 2 24 110 7 89 5.15e-17 78.2
Msa1100700 MtrunA17_Chr7g0233061 38.261 115 50 2 14 119 180 282 6.74e-17 80.1
Msa1100700 MtrunA17_Chr7g0247141 65.957 47 15 1 1 46 1 47 6.86e-17 73.9
Msa1100700 MtrunA17_Chr7g0238651 35.938 128 70 3 17 140 10 129 2.59e-16 78.6
Msa1100700 MtrunA17_Chr7g0228481 36.634 101 62 2 10 110 216 314 3.21e-16 79.0
Msa1100700 MtrunA17_Chr5g0416341 38.384 99 60 1 17 115 29 126 2.94e-15 75.9
Msa1100700 MtrunA17_Chr1g0193901 51.724 58 27 1 12 68 11 68 5.37e-15 70.1
Msa1100700 MtrunA17_Chr1g0193891 51.724 58 27 1 12 68 11 68 5.37e-15 70.1
Msa1100700 MtrunA17_Chr1g0193871 51.724 58 27 1 12 68 11 68 5.37e-15 70.1
Msa1100700 MtrunA17_Chr1g0193881 51.724 58 27 1 12 68 11 68 5.37e-15 70.1
Msa1100700 MtrunA17_Chr8g0362231 36.364 99 62 1 17 115 25 122 8.47e-14 71.6
Msa1100700 MtrunA17_Chr3g0145551 67.500 40 13 0 92 131 2 41 1.12e-12 62.8
Msa1100700 MtrunA17_Chr5g0434871 58.140 43 18 0 74 116 2 44 1.95e-12 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1100700 AT5G15310.1 61.194 335 99 7 1 313 1 326 3.18e-124 358
Msa1100700 AT5G15310.2 62.080 327 98 7 1 313 1 315 4.49e-124 358
Msa1100700 AT3G01140.2 56.215 354 105 8 1 313 1 345 6.05e-118 343
Msa1100700 AT3G01140.1 55.650 354 107 8 1 313 44 388 8.22e-115 337
Msa1100700 AT5G15310.4 72.727 220 41 3 1 201 1 220 2.56e-106 310
Msa1100700 AT3G61250.1 67.059 170 55 1 1 170 1 169 1.86e-81 249
Msa1100700 AT4G21440.1 75.188 133 33 0 1 133 1 133 6.32e-77 239
Msa1100700 AT5G16770.4 50.196 255 103 7 1 238 1 248 1.38e-76 237
Msa1100700 AT5G16770.3 50.196 255 103 7 1 238 1 248 1.38e-76 237
Msa1100700 AT3G02940.2 75.188 133 33 0 1 133 1 133 3.69e-76 236
Msa1100700 AT4G05100.1 78.462 130 27 1 1 129 1 130 5.06e-76 236
Msa1100700 AT5G16770.1 49.801 251 110 5 1 238 1 248 5.47e-76 236
Msa1100700 AT5G16770.2 49.801 251 110 5 1 238 1 248 5.47e-76 236
Msa1100700 AT3G02940.1 75.188 133 33 0 1 133 1 133 1.15e-75 235
Msa1100700 AT3G02940.3 75.188 133 33 0 1 133 1 133 1.15e-75 235
Msa1100700 AT1G34670.1 73.913 138 34 1 1 136 1 138 7.88e-75 234
Msa1100700 AT4G28110.1 74.419 129 33 0 1 129 1 129 3.69e-73 227
Msa1100700 AT5G10280.1 69.173 133 41 0 1 133 1 133 1.31e-70 222
Msa1100700 AT4G17785.1 40.608 362 161 12 1 312 1 358 1.30e-69 221
Msa1100700 AT5G65230.1 69.403 134 41 0 1 134 1 134 1.82e-69 219
Msa1100700 AT4G17785.2 42.169 332 149 10 1 291 1 330 1.61e-68 218
Msa1100700 AT5G61420.2 73.438 128 34 0 1 128 1 128 8.73e-68 216
Msa1100700 AT5G60890.1 69.697 132 40 0 1 132 1 132 9.65e-68 214
Msa1100700 AT5G07690.1 74.219 128 33 0 1 128 1 128 1.13e-67 215
Msa1100700 AT4G34990.1 53.846 195 82 2 1 188 1 194 3.40e-67 211
Msa1100700 AT5G54230.1 72.868 129 35 0 1 129 1 129 1.03e-66 212
Msa1100700 AT4G22680.1 70.229 131 39 0 1 131 1 131 1.16e-66 210
Msa1100700 AT1G18570.1 66.234 154 44 3 1 147 1 153 1.51e-66 213
Msa1100700 AT4G12350.1 67.153 137 45 0 1 137 1 137 1.06e-65 208
Msa1100700 AT5G07700.1 72.656 128 35 0 1 128 1 128 1.24e-65 209
Msa1100700 AT5G07700.2 72.656 128 35 0 1 128 1 128 1.24e-65 209
Msa1100700 AT5G16600.1 70.992 131 38 0 1 131 1 131 1.59e-65 209
Msa1100700 AT1G74080.1 70.079 127 38 0 1 127 1 127 6.09e-65 207
Msa1100700 AT4G09460.1 68.182 132 42 0 1 132 1 132 2.37e-64 203
Msa1100700 AT5G56110.1 61.333 150 58 0 1 150 1 150 4.04e-64 205
Msa1100700 AT2G31180.1 74.576 118 30 0 1 118 1 118 8.32e-64 202
Msa1100700 AT1G57560.1 65.248 141 49 0 1 141 1 141 8.89e-64 204
Msa1100700 AT1G66230.1 69.531 128 39 0 1 128 1 128 1.01e-63 203
Msa1100700 AT2G16720.1 67.424 132 43 0 1 132 1 132 1.34e-63 202
Msa1100700 AT1G22640.1 65.672 134 46 0 1 134 1 134 1.41e-63 202
Msa1100700 AT5G26660.1 71.094 128 37 0 1 128 1 128 1.64e-63 204
Msa1100700 AT5G62470.2 55.747 174 58 3 1 166 1 163 2.69e-63 204
Msa1100700 AT1G35515.1 63.830 141 47 1 1 137 1 141 2.72e-63 199
Msa1100700 AT4G38620.1 65.152 132 46 0 1 132 1 132 4.60e-63 201
Msa1100700 AT1G57560.2 67.939 131 42 0 1 131 1 131 4.63e-63 201
Msa1100700 AT3G47600.1 54.545 176 64 3 1 166 1 170 5.79e-63 202
Msa1100700 AT3G23250.1 52.821 195 73 2 1 195 1 176 1.89e-62 200
Msa1100700 AT5G62470.1 55.747 174 57 4 1 166 1 162 1.29e-61 200
Msa1100700 AT1G09540.1 66.667 132 44 0 1 132 1 132 4.46e-61 199
Msa1100700 AT1G08810.1 70.492 122 36 0 1 122 1 122 5.81e-61 196
Msa1100700 AT4G01680.3 69.291 127 39 0 1 127 1 127 1.12e-60 194
Msa1100700 AT1G06180.1 73.276 116 31 0 1 116 1 116 1.82e-60 193
Msa1100700 AT3G13540.1 66.400 125 42 0 4 128 15 139 3.58e-60 192
Msa1100700 AT1G74650.1 48.058 206 78 4 1 190 1 193 3.92e-60 195
Msa1100700 AT4G01680.1 69.291 127 39 0 1 127 1 127 4.47e-60 195
Msa1100700 AT1G74430.1 64.925 134 47 0 1 134 1 134 2.54e-59 191
Msa1100700 AT3G28910.1 67.213 122 40 0 1 122 1 122 3.31e-58 190
Msa1100700 AT1G18710.1 64.844 128 45 0 1 128 1 128 5.38e-58 187
Msa1100700 AT5G62320.1 62.406 133 43 1 2 127 3 135 6.22e-58 187
Msa1100700 AT5G14340.1 60.606 132 52 0 1 132 13 144 2.32e-57 186
Msa1100700 AT1G16490.1 67.241 116 38 0 2 117 4 119 1.04e-56 184
Msa1100700 AT5G15310.3 50.806 248 91 7 88 313 9 247 1.38e-56 183
Msa1100700 AT4G01680.2 63.309 139 39 1 1 127 1 139 1.65e-56 186
Msa1100700 AT3G28470.1 65.414 133 46 0 1 133 1 133 2.12e-56 185
Msa1100700 AT1G79180.1 66.667 117 39 0 2 118 4 120 2.80e-56 184
Msa1100700 AT1G56160.1 68.103 116 37 0 2 117 4 119 9.13e-56 183
Msa1100700 AT5G49330.1 68.103 116 37 0 1 116 1 116 1.20e-55 184
Msa1100700 AT3G62610.1 68.103 116 37 0 1 116 1 116 6.37e-55 182
Msa1100700 AT2G47460.1 44.019 209 102 3 1 206 1 197 8.74e-54 180
Msa1100700 AT3G12720.1 61.983 121 46 0 6 126 16 136 3.16e-53 177
Msa1100700 AT1G63910.1 57.143 133 57 0 1 133 1 133 4.82e-52 176
Msa1100700 AT3G13890.2 62.931 116 43 0 1 116 1 116 1.16e-51 174
Msa1100700 AT5G23000.1 64.103 117 41 1 1 116 1 117 7.47e-51 171
Msa1100700 AT3G49690.1 65.812 117 39 1 1 116 1 117 1.17e-50 170
Msa1100700 AT3G12820.1 64.655 116 41 0 3 118 5 120 1.30e-50 168
Msa1100700 AT5G57620.1 63.248 117 42 1 1 116 1 117 4.91e-50 169
Msa1100700 AT1G79180.2 51.333 150 40 1 2 118 4 153 1.56e-49 167
Msa1100700 AT5G65790.1 64.103 117 41 1 1 116 1 117 2.48e-49 168
Msa1100700 AT4G37780.1 61.538 117 44 1 1 116 1 117 2.90e-49 166
Msa1100700 AT2G36890.1 59.055 127 51 1 1 126 1 127 9.36e-49 165
Msa1100700 AT3G13890.1 58.400 125 43 1 1 116 1 125 1.29e-48 166
Msa1100700 AT2G36890.2 59.055 127 51 1 1 126 42 168 1.91e-48 165
Msa1100700 AT5G12870.1 65.741 108 37 0 12 119 18 125 7.29e-48 162
Msa1100700 AT3G08500.1 65.741 108 37 0 9 116 27 134 6.92e-46 159
Msa1100700 AT5G14750.1 63.462 104 38 0 13 116 17 120 1.37e-45 154
Msa1100700 AT5G40330.1 62.500 104 39 0 13 116 13 116 1.41e-44 152
Msa1100700 AT5G52600.1 52.857 140 57 1 12 142 12 151 1.93e-44 150
Msa1100700 AT5G35550.1 65.421 107 37 0 12 118 14 120 3.14e-44 152
Msa1100700 AT3G27920.1 60.952 105 41 0 13 117 15 119 3.04e-43 148
Msa1100700 AT5G40350.1 59.633 109 44 0 12 120 17 125 9.44e-43 147
Msa1100700 AT3G24310.1 62.857 105 39 0 11 115 17 121 1.84e-42 147
Msa1100700 AT1G48000.1 59.292 113 46 0 10 122 30 142 2.16e-42 147
Msa1100700 AT4G25560.1 61.321 106 41 0 13 118 11 116 4.31e-42 147
Msa1100700 AT4G13480.1 63.107 103 38 0 13 115 7 109 1.09e-41 145
Msa1100700 AT4G26930.1 58.036 112 46 1 10 121 17 127 1.33e-41 149
Msa1100700 AT5G52260.1 64.151 106 38 0 13 118 13 118 1.92e-41 145
Msa1100700 AT2G26960.1 55.752 113 49 1 9 121 17 128 2.02e-41 149
Msa1100700 AT5G55020.1 59.821 112 44 1 10 121 24 134 2.06e-41 150
Msa1100700 AT2G32460.1 59.259 108 44 0 8 115 14 121 2.23e-41 150
Msa1100700 AT2G32460.2 60.000 105 42 0 11 115 5 109 2.47e-41 149
Msa1100700 AT5G26660.2 74.419 86 22 0 43 128 12 97 4.52e-41 145
Msa1100700 AT3G01530.1 59.048 105 43 0 12 116 25 129 6.62e-41 142
Msa1100700 AT3G27810.1 56.364 110 48 0 12 121 20 129 7.56e-41 142
Msa1100700 AT3G48920.1 58.095 105 44 0 13 117 19 123 1.70e-40 142
Msa1100700 AT5G06100.1 58.095 105 44 0 11 115 31 135 2.00e-40 147
Msa1100700 AT3G30210.1 60.577 104 41 0 11 114 26 129 2.44e-40 142
Msa1100700 AT3G11440.2 57.692 104 44 0 12 115 41 144 3.75e-40 146
Msa1100700 AT5G06100.5 58.095 105 44 0 11 115 31 135 6.05e-40 147
Msa1100700 AT5G06100.2 58.095 105 44 0 11 115 31 135 6.05e-40 147
Msa1100700 AT5G06100.3 58.095 105 44 0 11 115 31 135 6.05e-40 147
Msa1100700 AT5G06100.4 58.095 105 44 0 11 115 31 135 6.05e-40 147
Msa1100700 AT3G11440.3 57.692 104 44 0 12 115 41 144 1.24e-39 146
Msa1100700 AT3G11440.4 57.692 104 44 0 12 115 41 144 1.24e-39 146
Msa1100700 AT3G11440.1 57.692 104 44 0 12 115 41 144 1.24e-39 146
Msa1100700 AT1G25340.1 54.783 115 52 0 13 127 19 133 1.83e-39 140
Msa1100700 AT1G66370.1 56.522 115 46 1 1 115 1 111 2.11e-39 139
Msa1100700 AT2G47190.1 50.435 115 57 0 8 122 16 130 7.80e-38 135
Msa1100700 AT3G53200.1 58.654 104 43 0 12 115 9 112 1.06e-37 134
Msa1100700 AT1G68320.1 54.955 111 50 0 12 122 19 129 1.22e-37 135
Msa1100700 AT3G06490.1 52.846 123 58 0 8 130 15 137 3.29e-37 135
Msa1100700 AT1G66380.1 60.952 105 41 0 11 115 7 111 1.76e-36 128
Msa1100700 AT3G46130.1 55.238 105 47 0 11 115 8 112 3.64e-36 131
Msa1100700 AT1G56650.1 50.000 144 62 2 11 144 7 150 4.92e-36 130
Msa1100700 AT5G59780.3 55.340 103 46 0 13 115 9 111 5.86e-36 130
Msa1100700 AT5G49620.1 51.220 123 60 0 8 130 22 144 6.50e-36 131
Msa1100700 AT1G66390.1 59.048 105 43 0 11 115 7 111 4.83e-35 127
Msa1100700 AT1G25340.2 52.174 115 50 1 13 127 19 128 9.59e-35 127
Msa1100700 AT3G47600.2 49.242 132 51 3 45 166 39 164 1.43e-34 128
Msa1100700 AT1G25340.3 52.174 115 50 1 13 127 19 128 1.91e-34 127
Msa1100700 AT3G60460.1 49.123 114 56 2 7 119 6 118 8.00e-33 123
Msa1100700 AT5G49620.2 45.985 137 60 1 8 130 22 158 2.68e-32 122
Msa1100700 AT5G14750.3 71.014 69 20 0 48 116 18 86 3.13e-31 115
Msa1100700 AT5G35550.2 72.973 74 20 0 45 118 50 123 3.69e-31 118
Msa1100700 AT3G12820.2 71.831 71 20 0 48 118 2 72 1.51e-30 114
Msa1100700 AT2G26950.1 45.133 113 61 1 9 121 13 124 8.89e-30 117
Msa1100700 AT1G22640.3 61.842 76 29 0 59 134 2 77 6.67e-29 110
Msa1100700 AT5G40350.2 61.842 76 29 0 45 120 5 80 2.20e-28 108
Msa1100700 AT5G59780.2 63.514 74 27 0 42 115 17 90 2.58e-28 109
Msa1100700 AT3G53200.2 65.753 73 25 0 43 115 7 79 2.77e-28 108
Msa1100700 AT3G46130.3 65.278 72 25 0 44 115 9 80 4.12e-28 108
Msa1100700 AT3G46130.4 63.514 74 27 0 42 115 17 90 5.09e-28 108
Msa1100700 AT2G23290.1 50.000 104 51 1 14 117 13 115 1.32e-27 109
Msa1100700 AT1G71030.1 51.579 95 45 1 38 132 7 100 1.84e-27 106
Msa1100700 AT4G37260.1 48.598 107 54 1 14 120 13 118 2.27e-27 109
Msa1100700 AT1G18960.1 45.902 122 59 4 14 133 10 126 2.59e-27 108
Msa1100700 AT1G71030.2 56.098 82 36 0 51 132 5 86 2.74e-27 105
Msa1100700 AT3G27810.2 57.143 77 33 0 45 121 4 80 9.32e-27 103
Msa1100700 AT5G67300.1 46.078 102 54 1 14 115 6 106 1.19e-25 104
Msa1100700 AT5G02320.3 46.667 105 55 1 12 116 65 168 2.82e-25 105
Msa1100700 AT5G02320.1 46.667 105 55 1 12 116 125 228 2.84e-25 106
Msa1100700 AT5G02320.2 46.667 105 55 1 12 116 125 228 2.84e-25 106
Msa1100700 AT2G39880.1 49.020 102 51 1 14 115 50 150 3.42e-25 104
Msa1100700 AT3G09230.1 47.664 107 47 2 14 116 55 156 6.13e-25 103
Msa1100700 AT3G50060.1 45.098 102 55 1 14 115 6 106 6.88e-25 102
Msa1100700 AT5G58850.1 45.370 108 56 2 12 118 103 208 9.77e-25 103
Msa1100700 AT4G18770.1 43.243 111 62 1 8 118 211 320 1.03e-24 103
Msa1100700 AT3G09370.1 46.154 104 55 1 12 115 128 230 1.32e-24 103
Msa1100700 AT3G09370.2 46.154 104 55 1 12 115 133 235 1.35e-24 103
Msa1100700 AT3G09370.3 46.154 104 55 1 12 115 141 243 1.74e-24 103
Msa1100700 AT1G66380.3 66.667 72 24 0 44 115 7 78 2.13e-24 95.5
Msa1100700 AT5G40360.1 44.762 105 56 2 12 116 156 258 2.41e-24 101
Msa1100700 AT3G27785.1 46.078 102 54 1 8 109 183 283 2.56e-24 102
Msa1100700 AT3G23250.2 43.796 137 58 2 59 195 2 119 6.97e-24 97.8
Msa1100700 AT3G55730.1 46.226 106 56 1 14 119 56 160 2.32e-23 99.4
Msa1100700 AT5G11050.1 43.396 106 57 2 14 118 105 208 4.78e-23 99.0
Msa1100700 AT1G17950.1 44.118 102 56 1 14 115 5 105 1.03e-22 95.1
Msa1100700 AT5G14750.4 67.241 58 19 0 59 116 2 59 2.34e-22 91.3
Msa1100700 AT5G14750.2 67.241 58 19 0 59 116 2 59 2.34e-22 91.3
Msa1100700 AT1G66380.2 56.962 79 34 0 11 89 7 85 3.21e-22 90.1
Msa1100700 AT4G32730.1 40.952 105 61 1 12 116 85 188 4.13e-22 97.4
Msa1100700 AT4G32730.1 33.019 106 69 2 14 118 35 139 5.70e-12 67.0
Msa1100700 AT4G32730.5 40.952 105 61 1 12 116 85 188 4.30e-22 97.4
Msa1100700 AT4G32730.5 33.019 106 69 2 14 118 35 139 6.14e-12 67.0
Msa1100700 AT4G32730.4 40.952 105 61 1 12 116 85 188 4.30e-22 97.4
Msa1100700 AT4G32730.4 33.019 106 69 2 14 118 35 139 6.14e-12 67.0
Msa1100700 AT4G32730.3 40.952 105 61 1 12 116 85 188 4.30e-22 97.4
Msa1100700 AT4G32730.3 33.019 106 69 2 14 118 35 139 6.14e-12 67.0
Msa1100700 AT4G32730.2 40.952 105 61 1 12 116 85 188 4.30e-22 97.4
Msa1100700 AT4G32730.2 33.019 106 69 2 14 118 35 139 6.14e-12 67.0
Msa1100700 AT5G11510.3 41.905 105 60 1 12 116 79 182 1.22e-21 95.9
Msa1100700 AT5G11510.1 41.905 105 60 1 12 116 79 182 1.22e-21 95.9
Msa1100700 AT5G11510.4 41.905 105 60 1 12 116 79 182 1.22e-21 95.9
Msa1100700 AT5G11510.2 41.905 105 60 1 12 116 79 182 1.54e-21 95.5
Msa1100700 AT5G11510.5 41.905 105 60 1 12 116 79 182 1.62e-21 95.5
Msa1100700 AT1G73410.1 41.803 122 61 3 14 135 6 117 1.68e-21 91.7
Msa1100700 AT1G73410.2 44.118 102 56 1 14 115 6 106 2.23e-21 90.5
Msa1100700 AT1G69560.1 39.815 108 64 1 9 116 102 208 2.34e-21 92.8
Msa1100700 AT1G69560.2 39.815 108 64 1 9 116 118 224 2.87e-21 92.8
Msa1100700 AT4G33450.1 38.053 113 64 2 3 115 13 119 7.83e-21 90.1
Msa1100700 AT1G26780.1 41.346 104 60 1 12 115 96 198 2.88e-20 89.0
Msa1100700 AT1G26780.2 41.346 104 60 1 12 115 96 198 3.26e-20 90.1
Msa1100700 AT5G61420.1 79.167 48 10 0 81 128 2 49 5.40e-20 88.6
Msa1100700 AT2G25230.1 39.024 123 72 2 4 124 16 137 8.75e-20 86.7
Msa1100700 AT5G17800.1 40.196 102 60 1 14 115 93 193 1.40e-18 85.1
Msa1100700 AT3G29020.1 35.238 105 67 1 14 118 65 168 4.17e-17 79.3
Msa1100700 AT4G28110.2 73.810 42 11 0 88 129 4 45 5.64e-17 78.2
Msa1100700 AT3G29020.2 35.922 103 65 1 14 116 67 168 6.74e-17 80.1
Msa1100700 AT4G00540.2 39.640 111 63 2 12 119 101 210 1.11e-16 80.5
Msa1100700 AT4G00540.1 39.640 111 63 2 12 119 99 208 1.66e-16 80.1
Msa1100700 AT2G02820.3 38.384 99 60 1 17 115 33 130 1.58e-15 76.6
Msa1100700 AT5G39700.1 35.577 104 66 1 15 118 57 159 1.77e-15 73.9
Msa1100700 AT2G02820.1 38.384 99 60 1 17 115 33 130 1.83e-15 77.0
Msa1100700 AT2G02820.2 38.384 99 60 1 17 115 33 130 2.20e-15 77.0
Msa1100700 AT1G74650.3 35.659 129 54 4 78 190 2 117 2.83e-15 74.7
Msa1100700 AT3G28910.2 66.667 45 15 0 78 122 2 46 8.97e-15 73.2
Msa1100700 AT1G14350.2 38.384 99 60 1 17 115 28 125 9.44e-15 74.7
Msa1100700 AT1G14350.1 38.384 99 60 1 17 115 28 125 9.44e-15 74.7
Msa1100700 AT5G40430.1 34.188 117 75 2 4 120 44 158 2.53e-14 72.0
Msa1100700 AT1G22640.2 63.830 47 17 0 88 134 16 62 3.44e-14 70.1
Msa1100700 AT1G74430.2 53.448 58 27 0 77 134 8 65 4.35e-14 70.5
Msa1100700 AT2G37630.1 35.000 100 63 1 17 114 7 106 5.04e-14 72.4
Msa1100700 AT5G59780.1 65.116 43 15 0 73 115 4 46 1.59e-13 68.2
Msa1100700 AT4G25560.2 61.224 49 19 0 70 118 2 50 1.81e-13 68.9
Msa1100700 AT3G46130.2 65.116 43 15 0 73 115 4 46 2.88e-13 67.8
Msa1100700 AT5G14340.2 59.091 44 18 0 88 131 10 53 4.43e-12 64.3

Find 82 sgRNAs with CRISPR-Local

Find 199 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAGGATCAATTCCCATTT+TGG 0.170005 7_3:+30995207 None:intergenic
GAATTTGTCAGCGGCATAAA+AGG 0.201385 7_3:+30997398 None:intergenic
TAAGAAAAGATTAACCAAAA+TGG 0.230797 7_3:-30995221 Msa1100700:CDS
TGTATACTCTAATCTTTATA+TGG 0.242759 7_3:+30997272 None:intergenic
TTACACTCTCCACCGCTTTC+CGG 0.265479 7_3:+30994755 None:intergenic
ATTTCATTATCTGTTCTCTT+AGG 0.277610 7_3:+30995268 None:intergenic
GCTAAGATTTGCAGCATTCT+TGG 0.289751 7_3:+30995141 None:intergenic
TCAAACCAATCAAAAGCTAT+TGG 0.311087 7_3:-30994408 Msa1100700:three_prime_UTR
GTTAGAATTCAAAGATTTGA+TGG 0.315601 7_3:-30994900 Msa1100700:CDS
AAAGAAGAAAATAAATAAAA+TGG 0.317849 7_3:-30994365 Msa1100700:three_prime_UTR
AACTTTCCCCTCTTAATATC+AGG 0.320397 7_3:+30996679 None:intergenic
AAATGCATGAAGTTGAATAA+TGG 0.352752 7_3:+30996636 None:intergenic
TAAGATGGACTAATTATCTA+AGG 0.387725 7_3:-30996702 Msa1100700:CDS
ATAATGAAATCAAGAACTAT+TGG 0.390797 7_3:-30995255 Msa1100700:CDS
GAGAAGTTGGAGGAGAAACT+TGG 0.394993 7_3:+30997297 None:intergenic
ACTTGAAGCTGAAGCAAGAT+TGG 0.402581 7_3:-30995092 Msa1100700:CDS
GTCATTGTCGGTTGAGTGCT+TGG 0.407492 7_3:-30994277 Msa1100700:three_prime_UTR
TCTTTATATGGTGGAGAAGT+TGG 0.409046 7_3:+30997284 None:intergenic
TGATCTTCCTCAGGTGTCCA+TGG 0.411631 7_3:+30997168 None:intergenic
AAGAAAAGATTAACCAAAAT+GGG 0.414779 7_3:-30995220 Msa1100700:CDS
TGTTTCTGTAGACAAGTTGA+TGG 0.425864 7_3:-30994219 Msa1100700:three_prime_UTR
GAAAAGGTTGGTTTAAAGAA+AGG 0.426041 7_3:-30997192 Msa1100700:CDS
AAGAAGAAGGTGAGAAAGAG+TGG 0.428852 7_3:-30994949 Msa1100700:CDS
TGGAAGAGAAAGAGAAAGAA+AGG 0.429608 7_3:+30997317 None:intergenic
TTCATTAGAACATTTCCAAT+GGG 0.430704 7_3:-30997231 Msa1100700:exon
ATCTAAGGCCTGATATTAAG+AGG 0.433219 7_3:-30996687 Msa1100700:CDS
ATCTTAGCCACAAGGCTCAA+TGG 0.433665 7_3:-30995126 Msa1100700:CDS
CGTTCTTTGCCTACAAAAGC+TGG 0.434834 7_3:-30997102 Msa1100700:intron
TCTTAGCCACAAGGCTCAAT+GGG 0.448848 7_3:-30995125 Msa1100700:CDS
TTTGATGGAGAATTCATCAA+TGG 0.459211 7_3:-30994885 Msa1100700:CDS
ATGAAGATAACAAGAACTAC+TGG 0.460330 7_3:-30994691 Msa1100700:CDS
AAAAGGTTGGTTTAAAGAAA+GGG 0.462253 7_3:-30997191 Msa1100700:CDS
CGCTTTCCGGTGACAAACTC+AGG 0.463872 7_3:+30994768 None:intergenic
AAGAACATGGTCATGGAAGC+TGG 0.467929 7_3:-30997125 Msa1100700:CDS
CACTTTCCCATTGAGCCTTG+TGG 0.471844 7_3:+30995119 None:intergenic
CAATTGCAACAGCATCAACT+TGG 0.472770 7_3:-30995046 Msa1100700:CDS
TATTATTAGAGCTTGAACAT+AGG 0.488378 7_3:+30994156 None:intergenic
TCATCTTCAAATCAAGTACT+TGG 0.499747 7_3:-30994977 Msa1100700:CDS
TGTACAAGAATTTAATGAGA+TGG 0.501135 7_3:+30997367 None:intergenic
ATGGTTGTGAAATTAAGTTA+TGG 0.506421 7_3:-30994346 Msa1100700:three_prime_UTR
GTAAGAAAGCAATTCAATCA+TGG 0.514050 7_3:-30994318 Msa1100700:three_prime_UTR
GCAAGAGCTGCAGACTAAGA+TGG 0.520053 7_3:-30996717 Msa1100700:CDS
GTACAAGAATTTAATGAGAT+GGG 0.526689 7_3:+30997368 None:intergenic
GATGGAAGTGGTAGCGGCGG+TGG 0.528157 7_3:-30994725 Msa1100700:CDS
ACTTGTGATGGAAGTGGTAG+CGG 0.531173 7_3:-30994731 Msa1100700:CDS
AATTTGTCAGCGGCATAAAA+GGG 0.535155 7_3:+30997399 None:intergenic
GTACTTGGTATTAAAGAAGA+AGG 0.544001 7_3:-30994962 Msa1100700:CDS
TTTCATTAGAACATTTCCAA+TGG 0.549227 7_3:-30997232 Msa1100700:exon
TAGAACATTGGCGAATCAGA+AGG 0.556955 7_3:+30994638 None:intergenic
TCACCATGTTGTGAAAAGGT+TGG 0.557617 7_3:-30997204 Msa1100700:CDS
CAACATGGTGATCTCCCCAT+TGG 0.561281 7_3:+30997216 None:intergenic
ATACTCTAATCTTTATATGG+TGG 0.567647 7_3:+30997275 None:intergenic
TTGCTTGATAATTCTAACTC+CGG 0.569468 7_3:-30994794 Msa1100700:CDS
TTATATGGTGGAGAAGTTGG+AGG 0.574757 7_3:+30997287 None:intergenic
TACATTGAAGAACATGGTCA+TGG 0.574804 7_3:-30997132 Msa1100700:CDS
ATGATCAGTGTTGCTGAGGA+GGG 0.575751 7_3:-30994830 Msa1100700:CDS
TTATCGATAGAAATTAGTGA+TGG 0.577496 7_3:-30994596 Msa1100700:three_prime_UTR
TCTAAGGCCTGATATTAAGA+GGG 0.578462 7_3:-30996686 Msa1100700:CDS
CGGTGACCTGAGTTTGTCAC+CGG 0.584452 7_3:-30994774 Msa1100700:CDS
GGAGAGTGTAATACTTGTGA+TGG 0.589020 7_3:-30994743 Msa1100700:CDS
CGGTGACAAACTCAGGTCAC+CGG 0.590245 7_3:+30994775 None:intergenic
GAGATCACCATGTTGTGAAA+AGG 0.593939 7_3:-30997208 Msa1100700:CDS
GTAGATGATGAAGGTTGTGA+TGG 0.594359 7_3:+30995004 None:intergenic
TTTGCAGGACTTGAGAGGTG+TGG 0.597250 7_3:-30996739 Msa1100700:intron
GATGATGATGTAGATGATGA+AGG 0.598426 7_3:+30994995 None:intergenic
AATGATCAGTGTTGCTGAGG+AGG 0.599130 7_3:-30994831 Msa1100700:CDS
GAAGGTGAGAAAGAGTGGAA+AGG 0.602261 7_3:-30994944 Msa1100700:CDS
TTATCTTACATTGAAGAACA+TGG 0.606328 7_3:-30997138 Msa1100700:CDS
TGTAATACTTGTGATGGAAG+TGG 0.616978 7_3:-30994737 Msa1100700:CDS
TTGGTTTAAAGAAAGGGCCA+TGG 0.628472 7_3:-30997185 Msa1100700:CDS
CTGAGTTTGTCACCGGAAAG+CGG 0.631632 7_3:-30994767 Msa1100700:CDS
TGCTGCAAATCTTAGCCACA+AGG 0.636234 7_3:-30995134 Msa1100700:CDS
CTAAGGCCTGATATTAAGAG+GGG 0.648811 7_3:-30996685 Msa1100700:CDS
GACAATGATCAGTGTTGCTG+AGG 0.653855 7_3:-30994834 Msa1100700:CDS
TCATTAGAACATTTCCAATG+GGG 0.660394 7_3:-30997230 Msa1100700:exon
TTATCAACGAAAATTAGAGA+CGG 0.669230 7_3:+30994501 None:intergenic
GAAAGGGCCATGGACACCTG+AGG 0.673311 7_3:-30997175 Msa1100700:CDS
TGTTCTCTTAGGCAAACGTG+TGG 0.685721 7_3:+30995279 None:intergenic
GGCAGAGAAGAATTTGTCAG+CGG 0.687212 7_3:+30997389 None:intergenic
AGTTTGTCACCGGAAAGCGG+TGG 0.707277 7_3:-30994764 Msa1100700:CDS
TGTGATGGAAGTGGTAGCGG+CGG 0.710359 7_3:-30994728 Msa1100700:CDS
TCAATATAAATCATTATACG+AGG 0.734219 7_3:+30997445 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATACTTTATTTAGAAATA+TGG + chr7_3:30995110-30995129 None:intergenic 10.0%
!!! AAGTATTTTGATTTTAAATT+AGG - chr7_3:30995122-30995141 Msa1100700:CDS 10.0%
!!! AGTATTTTGATTTTAAATTA+GGG - chr7_3:30995123-30995142 Msa1100700:CDS 10.0%
!! AAAGAAGAAAATAAATAAAA+TGG - chr7_3:30997306-30997325 Msa1100700:five_prime_UTR 10.0%
!!! TTTTATGTTTATGAAAAACA+TGG + chr7_3:30995240-30995259 None:intergenic 15.0%
!!! ATAACATTTTAATTTATGCA+TGG - chr7_3:30996225-30996244 Msa1100700:intron 15.0%
!!! TTTTCGCTAATAAAAATTTA+GGG + chr7_3:30996295-30996314 None:intergenic 15.0%
!!! TTTTTCGCTAATAAAAATTT+AGG + chr7_3:30996296-30996315 None:intergenic 15.0%
!!! TTTTCTAATTATTAGAACAT+TGG + chr7_3:30997048-30997067 None:intergenic 15.0%
!! TCAATATAAATCATTATACG+AGG + chr7_3:30994229-30994248 None:intergenic 20.0%
!! TGTATACTCTAATCTTTATA+TGG + chr7_3:30994402-30994421 None:intergenic 20.0%
!! CGATGAAAAAAAATATCAAA+TGG + chr7_3:30995322-30995341 None:intergenic 20.0%
!!! TTTTCCAATAATAGAATGAT+AGG + chr7_3:30995350-30995369 None:intergenic 20.0%
!! CTAGTACTAATAAAATATCA+AGG + chr7_3:30995519-30995538 None:intergenic 20.0%
!!! AGTTTTCATACTTAAAAACT+TGG - chr7_3:30995537-30995556 Msa1100700:intron 20.0%
!! TGTCAAAAGCAAATAAATTA+TGG + chr7_3:30995583-30995602 None:intergenic 20.0%
!!! ATGAAATATGATTTCCTTTT+TGG - chr7_3:30995817-30995836 Msa1100700:intron 20.0%
!! TAGTTTATATTCTTTCGATA+AGG - chr7_3:30995977-30995996 Msa1100700:intron 20.0%
!! AGTTTATATTCTTTCGATAA+GGG - chr7_3:30995978-30995997 Msa1100700:intron 20.0%
!!! TTTGATTTTTTTTTCCTGAA+CGG - chr7_3:30996081-30996100 Msa1100700:intron 20.0%
!! TGATCTTAATATGAAAAGTA+AGG + chr7_3:30996120-30996139 None:intergenic 20.0%
!!! ATTTTTTTGTCATGTACTTT+AGG - chr7_3:30996356-30996375 Msa1100700:intron 20.0%
!! ATAATGAAATCAAGAACTAT+TGG - chr7_3:30996416-30996435 Msa1100700:intron 20.0%
!! TAAGAAAAGATTAACCAAAA+TGG - chr7_3:30996450-30996469 Msa1100700:intron 20.0%
!! AAGAAAAGATTAACCAAAAT+GGG - chr7_3:30996451-30996470 Msa1100700:intron 20.0%
!!! ATAATTCAACTTTTTAGTGT+TGG - chr7_3:30997189-30997208 Msa1100700:CDS 20.0%
! GTACAAGAATTTAATGAGAT+GGG + chr7_3:30994306-30994325 None:intergenic 25.0%
! TGTACAAGAATTTAATGAGA+TGG + chr7_3:30994307-30994326 None:intergenic 25.0%
! ATACTCTAATCTTTATATGG+TGG + chr7_3:30994399-30994418 None:intergenic 25.0%
! TTTCATTAGAACATTTCCAA+TGG - chr7_3:30994439-30994458 Msa1100700:three_prime_UTR 25.0%
! TTCATTAGAACATTTCCAAT+GGG - chr7_3:30994440-30994459 Msa1100700:three_prime_UTR 25.0%
!!! AAAAGGTTGGTTTAAAGAAA+GGG - chr7_3:30994480-30994499 Msa1100700:three_prime_UTR 25.0%
! TTATCTTACATTGAAGAACA+TGG - chr7_3:30994533-30994552 Msa1100700:three_prime_UTR 25.0%
! TTTAGTGTAATCATATGTGT+CGG - chr7_3:30994771-30994790 Msa1100700:CDS 25.0%
! CAATTTCTTACGATCTTTAA+CGG + chr7_3:30994904-30994923 None:intergenic 25.0%
!!! GAAATTGGTTTTTTTTTTGC+AGG - chr7_3:30994917-30994936 Msa1100700:CDS 25.0%
!!! TAAGATGGACTAATTATCTA+AGG - chr7_3:30994969-30994988 Msa1100700:CDS 25.0%
! AAATGCATGAAGTTGAATAA+TGG + chr7_3:30995038-30995057 None:intergenic 25.0%
!! ATTCAACTTCATGCATTTTT+AGG - chr7_3:30995040-30995059 Msa1100700:CDS 25.0%
! ATGAAAAACATGGAAAAATG+CGG + chr7_3:30995230-30995249 None:intergenic 25.0%
! TCTTCCTATCATTCTATTAT+TGG - chr7_3:30995343-30995362 Msa1100700:intron 25.0%
!! CACAATTACAACAACAATTT+TGG - chr7_3:30995408-30995427 Msa1100700:intron 25.0%
!! TAGAGCATGATTTTAAATTG+CGG + chr7_3:30995448-30995467 None:intergenic 25.0%
! TTTCATACTTAAAAACTTGG+AGG - chr7_3:30995540-30995559 Msa1100700:intron 25.0%
!! ATTCTATCCTTTTGCATTTA+AGG + chr7_3:30995755-30995774 None:intergenic 25.0%
! TTCATGAACCAATGATTATT+TGG + chr7_3:30995802-30995821 None:intergenic 25.0%
!! AAATATGATTTCCTTTTTGG+TGG - chr7_3:30995820-30995839 Msa1100700:intron 25.0%
! AAATTTATTAGCCACCAAAA+AGG + chr7_3:30995834-30995853 None:intergenic 25.0%
! ATGAATTGTCTATCACAATT+CGG + chr7_3:30995933-30995952 None:intergenic 25.0%
! TAAATTGAATTAGTTCAGCT+CGG + chr7_3:30995959-30995978 None:intergenic 25.0%
! GTTTATATTCTTTCGATAAG+GGG - chr7_3:30995979-30995998 Msa1100700:intron 25.0%
!!! AGGGGTTTTGATTTTTTAAA+CGG - chr7_3:30995997-30996016 Msa1100700:intron 25.0%
! TAATTTATGCATGGATGTTA+AGG - chr7_3:30996234-30996253 Msa1100700:intron 25.0%
!! TAATAAAAATTTAGGGTGAG+GGG + chr7_3:30996288-30996307 None:intergenic 25.0%
!! CTAATAAAAATTTAGGGTGA+GGG + chr7_3:30996289-30996308 None:intergenic 25.0%
! ATTTCATTATCTGTTCTCTT+AGG + chr7_3:30996406-30996425 None:intergenic 25.0%
! GTTAGAATTCAAAGATTTGA+TGG - chr7_3:30996771-30996790 Msa1100700:intron 25.0%
! TTATCGATAGAAATTAGTGA+TGG - chr7_3:30997075-30997094 Msa1100700:intron 25.0%
! TTATCAACGAAAATTAGAGA+CGG + chr7_3:30997173-30997192 None:intergenic 25.0%
! ATGGTTGTGAAATTAAGTTA+TGG - chr7_3:30997325-30997344 Msa1100700:five_prime_UTR 25.0%
! ATGGATTTCCGTTAAAAAAT+AGG - chr7_3:30997372-30997391 Msa1100700:five_prime_UTR 25.0%
!!! GACAATGACCTATTTTTTAA+CGG + chr7_3:30997383-30997402 None:intergenic 25.0%
! GTTAAAAAATAGGTCATTGT+CGG - chr7_3:30997382-30997401 Msa1100700:five_prime_UTR 25.0%
! TATTATTAGAGCTTGAACAT+AGG + chr7_3:30997518-30997537 None:intergenic 25.0%
TCATTAGAACATTTCCAATG+GGG - chr7_3:30994441-30994460 Msa1100700:three_prime_UTR 30.0%
!! GAAAAGGTTGGTTTAAAGAA+AGG - chr7_3:30994479-30994498 Msa1100700:three_prime_UTR 30.0%
! GTTAAATTACCAGCTTTTGT+AGG + chr7_3:30994581-30994600 None:intergenic 30.0%
CGTTAAAGATCGTAAGAAAT+TGG - chr7_3:30994902-30994921 Msa1100700:CDS 30.0%
! AGATCTAAAGAGTGTATACA+TGG + chr7_3:30995299-30995318 None:intergenic 30.0%
!!! TAGTCCATAGTTTTAACTTG+CGG - chr7_3:30995377-30995396 Msa1100700:intron 30.0%
TGTTGTTGTAATTGTGATAG+CGG + chr7_3:30995404-30995423 None:intergenic 30.0%
AAAAGTAGCAAAGATCTTGA+TGG + chr7_3:30995491-30995510 None:intergenic 30.0%
! GGATTAGAATTTTCTGTTCA+AGG + chr7_3:30995653-30995672 None:intergenic 30.0%
TAAAGAATGTGTTGGAAATG+TGG + chr7_3:30995674-30995693 None:intergenic 30.0%
! TAAATTTTGAACATGGCTGT+GGG + chr7_3:30995702-30995721 None:intergenic 30.0%
! CAGAGAGTAAATTTTGAACA+TGG + chr7_3:30995709-30995728 None:intergenic 30.0%
TCTGACACCCAATTTAATTA+AGG - chr7_3:30995725-30995744 Msa1100700:intron 30.0%
AGGACCACCTTAATTAAATT+GGG + chr7_3:30995735-30995754 None:intergenic 30.0%
AAGGACCACCTTAATTAAAT+TGG + chr7_3:30995736-30995755 None:intergenic 30.0%
!!! TTCTTTTTGGTTCGGTTTAA+CGG + chr7_3:30995910-30995929 None:intergenic 30.0%
! TATCACAATTCGGTTCTTTT+TGG + chr7_3:30995923-30995942 None:intergenic 30.0%
AATCATCCGAATCGAATATT+AGG + chr7_3:30996024-30996043 None:intergenic 30.0%
!!! ATTCGATTCGGATGATTTTT+TGG - chr7_3:30996027-30996046 Msa1100700:intron 30.0%
AACAATTCTAACAGTTCAGT+TGG - chr7_3:30996057-30996076 Msa1100700:intron 30.0%
! GCTAATAAAAATTTAGGGTG+AGG + chr7_3:30996290-30996309 None:intergenic 30.0%
! TTTTTGTCATGTACTTTAGG+TGG - chr7_3:30996359-30996378 Msa1100700:intron 30.0%
TCATCTTCAAATCAAGTACT+TGG - chr7_3:30996694-30996713 Msa1100700:CDS 30.0%
GTACTTGGTATTAAAGAAGA+AGG - chr7_3:30996709-30996728 Msa1100700:CDS 30.0%
TTTGATGGAGAATTCATCAA+TGG - chr7_3:30996786-30996805 Msa1100700:intron 30.0%
! TTGCTTGATAATTCTAACTC+CGG - chr7_3:30996877-30996896 Msa1100700:intron 30.0%
ATGAAGATAACAAGAACTAC+TGG - chr7_3:30996980-30996999 Msa1100700:intron 30.0%
TCAAACCAATCAAAAGCTAT+TGG - chr7_3:30997263-30997282 Msa1100700:five_prime_UTR 30.0%
! GAAAACCAATAGCTTTTGAT+TGG + chr7_3:30997271-30997290 None:intergenic 30.0%
GTAAGAAAGCAATTCAATCA+TGG - chr7_3:30997353-30997372 Msa1100700:five_prime_UTR 30.0%
AATTTGTCAGCGGCATAAAA+GGG + chr7_3:30994275-30994294 None:intergenic 35.0%
TGGAAGAGAAAGAGAAAGAA+AGG + chr7_3:30994357-30994376 None:intergenic 35.0%
! TCTTTATATGGTGGAGAAGT+TGG + chr7_3:30994390-30994409 None:intergenic 35.0%
! AAACCAACCTTTTCACAACA+TGG + chr7_3:30994473-30994492 None:intergenic 35.0%
TACATTGAAGAACATGGTCA+TGG - chr7_3:30994539-30994558 Msa1100700:three_prime_UTR 35.0%
TATAGTTCTTCCCTCCAAAA+TGG - chr7_3:30994646-30994665 Msa1100700:CDS 35.0%
!! GCACATACACTCTTTTGATT+AGG + chr7_3:30994844-30994863 None:intergenic 35.0%
CTTACGATCTTTAACGGAAT+AGG + chr7_3:30994898-30994917 None:intergenic 35.0%
!!! TTTTTTTTGCAGGACTTGAG+AGG - chr7_3:30994927-30994946 Msa1100700:CDS 35.0%
! ATCTAAGGCCTGATATTAAG+AGG - chr7_3:30994984-30995003 Msa1100700:CDS 35.0%
! TCTAAGGCCTGATATTAAGA+GGG - chr7_3:30994985-30995004 Msa1100700:CDS 35.0%
AACTTTCCCCTCTTAATATC+AGG + chr7_3:30994995-30995014 None:intergenic 35.0%
!! TTCATGCATTTTTAGGCAAC+AGG - chr7_3:30995047-30995066 Msa1100700:CDS 35.0%
TCAGAATCTCTTAAATGCCA+TGG - chr7_3:30995616-30995635 Msa1100700:intron 35.0%
GGGTACAATAAAGAATGTGT+TGG + chr7_3:30995682-30995701 None:intergenic 35.0%
! GTAAATTTTGAACATGGCTG+TGG + chr7_3:30995703-30995722 None:intergenic 35.0%
GACACCCAATTTAATTAAGG+TGG - chr7_3:30995728-30995747 Msa1100700:intron 35.0%
TCACCAAGCCAAATAATCAT+TGG - chr7_3:30995791-30995810 Msa1100700:intron 35.0%
GAACCAATGATTATTTGGCT+TGG + chr7_3:30995797-30995816 None:intergenic 35.0%
!!! CAATTCGGTTCTTTTTGGTT+CGG + chr7_3:30995918-30995937 None:intergenic 35.0%
AACGGTCCTAATATTCGATT+CGG - chr7_3:30996015-30996034 Msa1100700:intron 35.0%
TGAAAAGTAAGGTCTATTCG+TGG + chr7_3:30996109-30996128 None:intergenic 35.0%
! AACAGGATCAATTCCCATTT+TGG + chr7_3:30996467-30996486 None:intergenic 35.0%
!!! TTTTTTGGCTTGTGTGTAAC+AGG + chr7_3:30996484-30996503 None:intergenic 35.0%
!!! GGCAAAAGGGTTTCATTTTT+TGG + chr7_3:30996499-30996518 None:intergenic 35.0%
!! GGAATGATTTTCAGGCAAAA+GGG + chr7_3:30996512-30996531 None:intergenic 35.0%
!! TGGAATGATTTTCAGGCAAA+AGG + chr7_3:30996513-30996532 None:intergenic 35.0%
! GCATTCTTGGAATGATTTTC+AGG + chr7_3:30996520-30996539 None:intergenic 35.0%
! GATGATGATGTAGATGATGA+AGG + chr7_3:30996679-30996698 None:intergenic 35.0%
! TGTAATACTTGTGATGGAAG+TGG - chr7_3:30996934-30996953 Msa1100700:intron 35.0%
! TGTTTCTGTAGACAAGTTGA+TGG - chr7_3:30997452-30997471 Msa1100700:five_prime_UTR 35.0%
! GTGTGTGACTTTTTACTTGT+TGG - chr7_3:30997485-30997504 Msa1100700:five_prime_UTR 35.0%
GAATTTGTCAGCGGCATAAA+AGG + chr7_3:30994276-30994295 None:intergenic 40.0%
! TTATATGGTGGAGAAGTTGG+AGG + chr7_3:30994387-30994406 None:intergenic 40.0%
GAGATCACCATGTTGTGAAA+AGG - chr7_3:30994463-30994482 Msa1100700:three_prime_UTR 40.0%
TCACCATGTTGTGAAAAGGT+TGG - chr7_3:30994467-30994486 Msa1100700:three_prime_UTR 40.0%
TTGGTTTAAAGAAAGGGCCA+TGG - chr7_3:30994486-30994505 Msa1100700:three_prime_UTR 40.0%
! AAGAGCTTTTGATCTTCCTC+AGG + chr7_3:30994515-30994534 None:intergenic 40.0%
TTCTTCCCTCCAAAATGGAT+GGG - chr7_3:30994651-30994670 Msa1100700:CDS 40.0%
! TGTATCCCATCCATTTTGGA+GGG + chr7_3:30994659-30994678 None:intergenic 40.0%
GTCTGCATTTGTGCTTCATA+GGG + chr7_3:30994682-30994701 None:intergenic 40.0%
TGTCTGCATTTGTGCTTCAT+AGG + chr7_3:30994683-30994702 None:intergenic 40.0%
! ATCCTCTACAGTCGACTTTA+TGG + chr7_3:30994875-30994894 None:intergenic 40.0%
CTAAGGCCTGATATTAAGAG+GGG - chr7_3:30994986-30995005 Msa1100700:CDS 40.0%
!! GCATTTTTAGGCAACAGGTT+TGG - chr7_3:30995052-30995071 Msa1100700:CDS 40.0%
! AAGAGTGTATACATGGCTCA+TGG + chr7_3:30995292-30995311 None:intergenic 40.0%
GCAAAGATCTTGATGGAGTT+TGG + chr7_3:30995484-30995503 None:intergenic 40.0%
TCAAGGAAATTGAGATGCCA+TGG + chr7_3:30995636-30995655 None:intergenic 40.0%
AGGTGGTCCTTAAATGCAAA+AGG - chr7_3:30995745-30995764 Msa1100700:intron 40.0%
!! TTTGGCTTGGTGAGAAAGAA+TGG + chr7_3:30995784-30995803 None:intergenic 40.0%
! AAAAATTTAGGGTGAGGGGA+TGG + chr7_3:30996284-30996303 None:intergenic 40.0%
GCTAAGATTTGCAGCATTCT+TGG + chr7_3:30996533-30996552 None:intergenic 40.0%
ACTTGAAGCTGAAGCAAGAT+TGG - chr7_3:30996579-30996598 Msa1100700:intron 40.0%
CAATTGCAACAGCATCAACT+TGG - chr7_3:30996625-30996644 Msa1100700:CDS 40.0%
GTAGATGATGAAGGTTGTGA+TGG + chr7_3:30996670-30996689 None:intergenic 40.0%
AAGAAGAAGGTGAGAAAGAG+TGG - chr7_3:30996722-30996741 Msa1100700:CDS 40.0%
! GGAGAGTGTAATACTTGTGA+TGG - chr7_3:30996928-30996947 Msa1100700:intron 40.0%
TAGAACATTGGCGAATCAGA+AGG + chr7_3:30997036-30997055 None:intergenic 40.0%
GGCAGAGAAGAATTTGTCAG+CGG + chr7_3:30994285-30994304 None:intergenic 45.0%
GAGAAGTTGGAGGAGAAACT+TGG + chr7_3:30994377-30994396 None:intergenic 45.0%
AAGAACATGGTCATGGAAGC+TGG - chr7_3:30994546-30994565 Msa1100700:three_prime_UTR 45.0%
CGTTCTTTGCCTACAAAAGC+TGG - chr7_3:30994569-30994588 Msa1100700:three_prime_UTR 45.0%
GTTCTTCCCTCCAAAATGGA+TGG - chr7_3:30994650-30994669 Msa1100700:CDS 45.0%
! GTGTATCCCATCCATTTTGG+AGG + chr7_3:30994660-30994679 None:intergenic 45.0%
! AGGGTGTATCCCATCCATTT+TGG + chr7_3:30994663-30994682 None:intergenic 45.0%
CACGAATACCGAACATGACA+CGG - chr7_3:30994701-30994720 Msa1100700:CDS 45.0%
!! CATATGTGTCGGTGTTGTGT+TGG - chr7_3:30994782-30994801 Msa1100700:CDS 45.0%
CACCATAAAGTCGACTGTAG+AGG - chr7_3:30994870-30994889 Msa1100700:CDS 45.0%
! TGCTATCACAACCGCAGTTT+TGG - chr7_3:30995204-30995223 Msa1100700:CDS 45.0%
GAAAAATGCGGCCAAAACTG+CGG + chr7_3:30995218-30995237 None:intergenic 45.0%
CGGACCGCAAGTTAAAACTA+TGG + chr7_3:30995384-30995403 None:intergenic 45.0%
TGTTCTCTTAGGCAAACGTG+TGG + chr7_3:30996395-30996414 None:intergenic 45.0%
TGCTGCAAATCTTAGCCACA+AGG - chr7_3:30996537-30996556 Msa1100700:intron 45.0%
ATCTTAGCCACAAGGCTCAA+TGG - chr7_3:30996545-30996564 Msa1100700:intron 45.0%
TCTTAGCCACAAGGCTCAAT+GGG - chr7_3:30996546-30996565 Msa1100700:intron 45.0%
GAAGGTGAGAAAGAGTGGAA+AGG - chr7_3:30996727-30996746 Msa1100700:CDS 45.0%
! GACAATGATCAGTGTTGCTG+AGG - chr7_3:30996837-30996856 Msa1100700:intron 45.0%
! AATGATCAGTGTTGCTGAGG+AGG - chr7_3:30996840-30996859 Msa1100700:intron 45.0%
! ATGATCAGTGTTGCTGAGGA+GGG - chr7_3:30996841-30996860 Msa1100700:intron 45.0%
! ACTTGTGATGGAAGTGGTAG+CGG - chr7_3:30996940-30996959 Msa1100700:intron 45.0%
CAACATGGTGATCTCCCCAT+TGG + chr7_3:30994458-30994477 None:intergenic 50.0%
TGATCTTCCTCAGGTGTCCA+TGG + chr7_3:30994506-30994525 None:intergenic 50.0%
GTCAGTGTCCGTGTCATGTT+CGG + chr7_3:30994712-30994731 None:intergenic 50.0%
TGAGATTCGTAACCGTGTCG+TGG + chr7_3:30994738-30994757 None:intergenic 50.0%
!! TGTCGGTGTTGTGTTGGTCT+CGG - chr7_3:30994788-30994807 Msa1100700:CDS 50.0%
GATTAGGCGTTTCCCAGTGT+CGG + chr7_3:30994828-30994847 None:intergenic 50.0%
TTTGCAGGACTTGAGAGGTG+TGG - chr7_3:30994932-30994951 Msa1100700:CDS 50.0%
GCAAGAGCTGCAGACTAAGA+TGG - chr7_3:30994954-30994973 Msa1100700:CDS 50.0%
CTGCGGTTGTGATAGCATTG+AGG + chr7_3:30995201-30995220 None:intergenic 50.0%
GTCTATTCGTGGTTCCGTTC+AGG + chr7_3:30996098-30996117 None:intergenic 50.0%
GGTCATCTCTAGCACGAACT+CGG - chr7_3:30996255-30996274 Msa1100700:intron 50.0%
CACTTTCCCATTGAGCCTTG+TGG + chr7_3:30996555-30996574 None:intergenic 50.0%
CTGAGTTTGTCACCGGAAAG+CGG - chr7_3:30996904-30996923 Msa1100700:intron 50.0%
TTACACTCTCCACCGCTTTC+CGG + chr7_3:30996919-30996938 None:intergenic 50.0%
! GTCATTGTCGGTTGAGTGCT+TGG - chr7_3:30997394-30997413 Msa1100700:five_prime_UTR 50.0%
TCTGATGCGTGTCCGACACT+GGG - chr7_3:30994813-30994832 Msa1100700:CDS 55.0%
CGGTGACAAACTCAGGTCAC+CGG + chr7_3:30996899-30996918 None:intergenic 55.0%
CGGTGACCTGAGTTTGTCAC+CGG - chr7_3:30996897-30996916 Msa1100700:intron 55.0%
CGCTTTCCGGTGACAAACTC+AGG + chr7_3:30996906-30996925 None:intergenic 55.0%
AGTTTGTCACCGGAAAGCGG+TGG - chr7_3:30996907-30996926 Msa1100700:intron 55.0%
!! TGTGATGGAAGTGGTAGCGG+CGG - chr7_3:30996943-30996962 Msa1100700:intron 55.0%
GAAAGGGCCATGGACACCTG+AGG - chr7_3:30994496-30994515 Msa1100700:three_prime_UTR 60.0%
GACACTGACACGCCACGACA+CGG - chr7_3:30994723-30994742 Msa1100700:CDS 60.0%
CTCTGATGCGTGTCCGACAC+TGG - chr7_3:30994812-30994831 Msa1100700:CDS 60.0%
!! GATGGAAGTGGTAGCGGCGG+TGG - chr7_3:30996946-30996965 Msa1100700:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 30994145 30997548 30994145 ID=Msa1100700;Name=Msa1100700
chr7_3 mRNA 30994145 30997548 30994145 ID=Msa1100700-mRNA-1;Parent=Msa1100700;Name=Msa1100700-mRNA-1;_AED=0.03;_eAED=0.03;_QI=313|1|1|1|1|1|3|492|313
chr7_3 exon 30994145 30995315 30994145 ID=Msa1100700-mRNA-1:exon:6583;Parent=Msa1100700-mRNA-1
chr7_3 exon 30996625 30996754 30996625 ID=Msa1100700-mRNA-1:exon:6582;Parent=Msa1100700-mRNA-1
chr7_3 exon 30997103 30997548 30997103 ID=Msa1100700-mRNA-1:exon:6581;Parent=Msa1100700-mRNA-1
chr7_3 five_prime_UTR 30997236 30997548 30997236 ID=Msa1100700-mRNA-1:five_prime_utr;Parent=Msa1100700-mRNA-1
chr7_3 CDS 30997103 30997235 30997103 ID=Msa1100700-mRNA-1:cds;Parent=Msa1100700-mRNA-1
chr7_3 CDS 30996625 30996754 30996625 ID=Msa1100700-mRNA-1:cds;Parent=Msa1100700-mRNA-1
chr7_3 CDS 30994637 30995315 30994637 ID=Msa1100700-mRNA-1:cds;Parent=Msa1100700-mRNA-1
chr7_3 three_prime_UTR 30994145 30994636 30994145 ID=Msa1100700-mRNA-1:three_prime_utr;Parent=Msa1100700-mRNA-1
Gene Sequence

>Msa1100700

ATGGGGAGATCACCATGTTGTGAAAAGGTTGGTTTAAAGAAAGGGCCATGGACACCTGAGGAAGATCAAAAGCTCTTATCTTACATTGAAGAACATGGTCATGGAAGCTGGCGTTCTTTGCCTACAAAAGCTGGACTTGAGAGGTGTGGCAAGAGCTGCAGACTAAGATGGACTAATTATCTAAGGCCTGATATTAAGAGGGGAAAGTTTAGTGTGCAAGAAGAACAAACCATTATTCAACTTCATGCATTTTTAGGCAACAGGTGGTCATCAATAGCCACACGTTTGCCTAAGAGAACAGATAATGAAATCAAGAACTATTGGAACACACATCTTAAGAAAAGATTAACCAAAATGGGAATTGATCCTGTTACACACAAGCCAAAAAATGAAACCCTTTTGCCTGAAAATCATTCCAAGAATGCTGCAAATCTTAGCCACAAGGCTCAATGGGAAAGTGCAAGACTTGAAGCTGAAGCAAGATTGGTTAGAGAATCAAAGTTACGTTCACAATTGCAACAGCATCAACTTGGAAGTAATATTTCTCTTTTTCCATCACAACCTTCATCATCTACATCATCATCTTCAAATCAAGTACTTGGTATTAAAGAAGAAGGTGAGAAAGAGTGGAAAGGTTATGAAGATTCAACACATTTGTTAGAATTCAAAGATTTGATGGAGAATTCATCAATGGCTTTTAGTTCTACATTGCAACATGATATGACAATGATCAGTGTTGCTGAGGAGGGTTTCACTAATCTCTTGCTTGATAATTCTAACTCCGGTGACCTGAGTTTGTCACCGGAAAGCGGTGGAGAGTGTAATACTTGTGATGGAAGTGGTAGCGGCGGTGGAAGTGATTTCAATGAAGATAACAAGAACTACTGGAACAACATTCTCAATTTAGTTAATTCTTCGCCTTCTGATTCGCCAATGTTCTAA
Protein sequence

>Msa1100700

MGRSPCCEKVGLKKGPWTPEEDQKLLSYIEEHGHGSWRSLPTKAGLERCGKSCRLRWTNYLRPDIKRGKFSVQEEQTIIQLHAFLGNRWSSIATRLPKRTDNEIKNYWNTHLKKRLTKMGIDPVTHKPKNETLLPENHSKNAANLSHKAQWESARLEAEARLVRESKLRSQLQQHQLGSNISLFPSQPSSSTSSSSNQVLGIKEEGEKEWKGYEDSTHLLEFKDLMENSSMAFSSTLQHDMTMISVAEEGFTNLLLDNSNSGDLSLSPESGGECNTCDGSGSGGGSDFNEDNKNYWNNILNLVNSSPSDSPMF*