Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213060 | XP_024637615.1 | 95.283 | 318 | 10 | 5 | 1 | 315 | 1 | 316 | 0.0 | 598 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213060 | sp|Q9FME3|TCP5_ARATH | 80.682 | 88 | 16 | 1 | 50 | 136 | 45 | 132 | 4.41e-45 | 160 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa1213060 | TF | TCP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa1213060 | 0.806276 | 8.898244e-50 | -8.615850e-47 |
| Msa0012440 | Msa1213060 | 0.825336 | 4.954955e-54 | -8.615850e-47 |
| Msa0018220 | Msa1213060 | 0.803374 | 3.594268e-49 | -8.615850e-47 |
| Msa0041540 | Msa1213060 | 0.816284 | 5.987785e-52 | -8.615850e-47 |
| Msa0052020 | Msa1213060 | 0.809450 | 1.880545e-50 | -8.615850e-47 |
| Msa0057240 | Msa1213060 | 0.828690 | 7.812859e-55 | -8.615850e-47 |
| Msa0059960 | Msa1213060 | -0.803531 | 3.335089e-49 | -8.615850e-47 |
| Msa0094420 | Msa1213060 | 0.846991 | 1.534085e-59 | -8.615850e-47 |
| Msa0097050 | Msa1213060 | 0.801906 | 7.218468e-49 | -8.615850e-47 |
| Msa0603680 | Msa1213060 | 0.809130 | 2.202694e-50 | -8.615850e-47 |
| Msa0606060 | Msa1213060 | 0.804167 | 2.459954e-49 | -8.615850e-47 |
| Msa0619330 | Msa1213060 | 0.804031 | 2.625864e-49 | -8.615850e-47 |
| Msa0619980 | Msa1213060 | 0.822009 | 2.978750e-53 | -8.615850e-47 |
| Msa0620270 | Msa1213060 | 0.808096 | 3.662738e-50 | -8.615850e-47 |
| Msa0621770 | Msa1213060 | 0.815318 | 9.831791e-52 | -8.615850e-47 |
| Msa0622390 | Msa1213060 | 0.808401 | 3.154591e-50 | -8.615850e-47 |
| Msa0640880 | Msa1213060 | 0.805127 | 1.550845e-49 | -8.615850e-47 |
| Msa0645050 | Msa1213060 | 0.809165 | 2.165194e-50 | -8.615850e-47 |
| Msa0652980 | Msa1213060 | 0.818913 | 1.529403e-52 | -8.615850e-47 |
| Msa0653710 | Msa1213060 | 0.807700 | 4.447312e-50 | -8.615850e-47 |
| Msa0654060 | Msa1213060 | 0.807136 | 5.855842e-50 | -8.615850e-47 |
| Msa0656590 | Msa1213060 | 0.806474 | 8.081679e-50 | -8.615850e-47 |
| Msa0663090 | Msa1213060 | 0.854274 | 1.372921e-61 | -8.615850e-47 |
| Msa0681890 | Msa1213060 | 0.812154 | 4.888992e-51 | -8.615850e-47 |
| Msa0686610 | Msa1213060 | 0.802899 | 4.507192e-49 | -8.615850e-47 |
| Msa0695370 | Msa1213060 | 0.805815 | 1.112588e-49 | -8.615850e-47 |
| Msa0719340 | Msa1213060 | 0.804400 | 2.199768e-49 | -8.615850e-47 |
| Msa0722940 | Msa1213060 | 0.831785 | 1.371272e-55 | -8.615850e-47 |
| Msa0723150 | Msa1213060 | 0.831272 | 1.833890e-55 | -8.615850e-47 |
| Msa0730180 | Msa1213060 | 0.800410 | 1.459946e-48 | -8.615850e-47 |
| Msa0772020 | Msa1213060 | 0.813090 | 3.052566e-51 | -8.615850e-47 |
| Msa0772150 | Msa1213060 | 0.821381 | 4.160867e-53 | -8.615850e-47 |
| Msa0810020 | Msa1213060 | 0.822013 | 2.972702e-53 | -8.615850e-47 |
| Msa0820670 | Msa1213060 | 0.826292 | 2.938425e-54 | -8.615850e-47 |
| Msa0123940 | Msa1213060 | 0.802669 | 5.027197e-49 | -8.615850e-47 |
| Msa0135980 | Msa1213060 | 0.809369 | 1.957592e-50 | -8.615850e-47 |
| Msa0141550 | Msa1213060 | 0.809166 | 2.164455e-50 | -8.615850e-47 |
| Msa0141670 | Msa1213060 | 0.836966 | 6.865462e-57 | -8.615850e-47 |
| Msa0146470 | Msa1213060 | 0.803525 | 3.344255e-49 | -8.615850e-47 |
| Msa0149560 | Msa1213060 | 0.824714 | 6.949000e-54 | -8.615850e-47 |
| Msa0161200 | Msa1213060 | 0.805214 | 1.486869e-49 | -8.615850e-47 |
| Msa0207180 | Msa1213060 | 0.832682 | 8.224139e-56 | -8.615850e-47 |
| Msa0219190 | Msa1213060 | 0.805846 | 1.096036e-49 | -8.615850e-47 |
| Msa0219660 | Msa1213060 | 0.818736 | 1.678040e-52 | -8.615850e-47 |
| Msa0221800 | Msa1213060 | 0.829530 | 4.888256e-55 | -8.615850e-47 |
| Msa0227490 | Msa1213060 | 0.802912 | 4.478311e-49 | -8.615850e-47 |
| Msa0227500 | Msa1213060 | 0.836395 | 9.598493e-57 | -8.615850e-47 |
| Msa0230400 | Msa1213060 | 0.817752 | 2.802090e-52 | -8.615850e-47 |
| Msa0366010 | Msa1213060 | 0.816225 | 6.169644e-52 | -8.615850e-47 |
| Msa0371610 | Msa1213060 | 0.813860 | 2.066560e-51 | -8.615850e-47 |
| Msa0382560 | Msa1213060 | 0.827004 | 1.987986e-54 | -8.615850e-47 |
| Msa0413930 | Msa1213060 | 0.840381 | 9.000626e-58 | -8.615850e-47 |
| Msa0420070 | Msa1213060 | 0.809581 | 1.763142e-50 | -8.615850e-47 |
| Msa0458950 | Msa1213060 | 0.833505 | 5.132198e-56 | -8.615850e-47 |
| Msa0988480 | Msa1213060 | 0.834592 | 2.742511e-56 | -8.615850e-47 |
| Msa0992590 | Msa1213060 | 0.802809 | 4.702765e-49 | -8.615850e-47 |
| Msa1002040 | Msa1213060 | 0.806722 | 7.164674e-50 | -8.615850e-47 |
| Msa1030280 | Msa1213060 | 0.812663 | 3.786208e-51 | -8.615850e-47 |
| Msa1044040 | Msa1213060 | 0.824164 | 9.363935e-54 | -8.615850e-47 |
| Msa1070900 | Msa1213060 | 0.815624 | 8.406016e-52 | -8.615850e-47 |
| Msa1073350 | Msa1213060 | 0.808132 | 3.598450e-50 | -8.615850e-47 |
| Msa0246280 | Msa1213060 | 0.801483 | 8.816157e-49 | -8.615850e-47 |
| Msa0274780 | Msa1213060 | 0.821617 | 3.671026e-53 | -8.615850e-47 |
| Msa0281570 | Msa1213060 | 0.819241 | 1.288057e-52 | -8.615850e-47 |
| Msa0295520 | Msa1213060 | 0.807680 | 4.491828e-50 | -8.615850e-47 |
| Msa0315480 | Msa1213060 | 0.832819 | 7.603449e-56 | -8.615850e-47 |
| Msa0320540 | Msa1213060 | 0.818521 | 1.876784e-52 | -8.615850e-47 |
| Msa0331780 | Msa1213060 | 0.854391 | 1.269928e-61 | -8.615850e-47 |
| Msa0338570 | Msa1213060 | 0.802814 | 4.693495e-49 | -8.615850e-47 |
| Msa0344070 | Msa1213060 | 0.827242 | 1.743072e-54 | -8.615850e-47 |
| Msa1107970 | Msa1213060 | 0.803362 | 3.615553e-49 | -8.615850e-47 |
| Msa1118140 | Msa1213060 | 0.810828 | 9.491284e-51 | -8.615850e-47 |
| Msa1157160 | Msa1213060 | 0.802237 | 6.170715e-49 | -8.615850e-47 |
| Msa1186210 | Msa1213060 | 0.802980 | 4.337137e-49 | -8.615850e-47 |
| Msa1200920 | Msa1213060 | 0.828489 | 8.740462e-55 | -8.615850e-47 |
| Msa1201990 | Msa1213060 | 0.822077 | 2.872008e-53 | -8.615850e-47 |
| Msa1213060 | Msa1214210 | 0.800301 | 1.536983e-48 | -8.615850e-47 |
| Msa1213060 | Msa1214900 | 0.804314 | 2.292132e-49 | -8.615850e-47 |
| Msa1213060 | Msa1221260 | 0.825194 | 5.355020e-54 | -8.615850e-47 |
| Msa1213060 | Msa1232860 | 0.838421 | 2.904797e-57 | -8.615850e-47 |
| Msa1213060 | Msa1248400 | 0.805777 | 1.132922e-49 | -8.615850e-47 |
| Msa1213060 | Msa1254190 | 0.822443 | 2.361892e-53 | -8.615850e-47 |
| Msa1213060 | Msa1254770 | 0.809959 | 1.462235e-50 | -8.615850e-47 |
| Msa1213060 | Msa1254800 | 0.808062 | 3.725006e-50 | -8.615850e-47 |
| Msa1213060 | Msa1258810 | 0.805611 | 1.227949e-49 | -8.615850e-47 |
| Msa1213060 | Msa1275290 | 0.810736 | 9.940297e-51 | -8.615850e-47 |
| Msa1213060 | Msa1295010 | 0.803858 | 2.851746e-49 | -8.615850e-47 |
| Msa1213060 | Msa1310260 | 0.801349 | 9.389402e-49 | -8.615850e-47 |
| Msa1213060 | Msa1321000 | 0.800970 | 1.122483e-48 | -8.615850e-47 |
| Msa1213060 | Msa1323060 | 0.808977 | 2.375880e-50 | -8.615850e-47 |
| Msa1213060 | Msa1325980 | 0.804631 | 1.969256e-49 | -8.615850e-47 |
| Msa1213060 | Msa1327820 | 0.819381 | 1.196979e-52 | -8.615850e-47 |
| Msa1213060 | Msa1352290 | 0.808817 | 2.570417e-50 | -8.615850e-47 |
| Msa1213060 | Msa1354040 | 0.833459 | 5.267945e-56 | -8.615850e-47 |
| Msa1213060 | Msa1367940 | 0.800351 | 1.500884e-48 | -8.615850e-47 |
| Msa1213060 | Msa1379990 | 0.805188 | 1.506109e-49 | -8.615850e-47 |
| Msa1213060 | Msa1397540 | 0.800860 | 1.181840e-48 | -8.615850e-47 |
| Msa1213060 | Msa1420060 | 0.825935 | 3.573721e-54 | -8.615850e-47 |
| Msa1213060 | Msa1429420 | 0.822293 | 2.560412e-53 | -8.615850e-47 |
| Msa1213060 | Msa1429830 | 0.850053 | 2.177261e-60 | -8.615850e-47 |
| Msa1213060 | Msa1435670 | 0.820945 | 5.245899e-53 | -8.615850e-47 |
| Msa0525240 | Msa1213060 | 0.826037 | 3.378573e-54 | -8.615850e-47 |
| Msa0538240 | Msa1213060 | 0.805924 | 1.055235e-49 | -8.615850e-47 |
| Msa0538570 | Msa1213060 | 0.806305 | 8.774893e-50 | -8.615850e-47 |
| Msa0557630 | Msa1213060 | 0.826932 | 2.067582e-54 | -8.615850e-47 |
| Msa0558890 | Msa1213060 | 0.802783 | 4.761562e-49 | -8.615850e-47 |
| Msa0575250 | Msa1213060 | 0.830599 | 2.682466e-55 | -8.615850e-47 |
| Msa0581340 | Msa1213060 | 0.823159 | 1.609224e-53 | -8.615850e-47 |
| Msa0594390 | Msa1213060 | 0.806290 | 8.837499e-50 | -8.615850e-47 |
| Msa0600390 | Msa1213060 | 0.806486 | 8.037303e-50 | -8.615850e-47 |
| Msa0850500 | Msa1213060 | 0.844409 | 7.694694e-59 | -8.615850e-47 |
| Msa0886980 | Msa1213060 | 0.808135 | 3.592919e-50 | -8.615850e-47 |
| Msa0905550 | Msa1213060 | 0.802581 | 5.242867e-49 | -8.615850e-47 |
| Msa0906720 | Msa1213060 | 0.801237 | 9.898355e-49 | -8.615850e-47 |
| Msa0930330 | Msa1213060 | 0.843740 | 1.163825e-58 | -8.615850e-47 |
| Msa0931480 | Msa1213060 | 0.802362 | 5.815184e-49 | -8.615850e-47 |
| Msa0951710 | Msa1213060 | 0.802876 | 4.556091e-49 | -8.615850e-47 |
| Msa0974750 | Msa1213060 | 0.809529 | 1.809336e-50 | -8.615850e-47 |
| Msa0978000 | Msa1213060 | 0.811163 | 8.033301e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213060 | MtrunA17_Chr4g0061561 | 96.429 | 308 | 6 | 5 | 11 | 315 | 1 | 306 | 0.0 | 583 |
| Msa1213060 | MtrunA17_Chr3g0086961 | 43.750 | 368 | 127 | 14 | 15 | 308 | 3 | 364 | 1.12e-62 | 203 |
| Msa1213060 | MtrunA17_Chr7g0219461 | 61.017 | 118 | 45 | 1 | 12 | 128 | 1 | 118 | 1.67e-43 | 152 |
| Msa1213060 | MtrunA17_Chr6g0454781 | 71.429 | 84 | 24 | 0 | 49 | 132 | 31 | 114 | 1.80e-37 | 136 |
| Msa1213060 | MtrunA17_Chr8g0376571 | 69.863 | 73 | 22 | 0 | 57 | 129 | 51 | 123 | 3.33e-28 | 114 |
| Msa1213060 | MtrunA17_Chr8g0360441 | 52.809 | 89 | 42 | 0 | 40 | 128 | 27 | 115 | 3.50e-22 | 96.3 |
| Msa1213060 | MtrunA17_Chr4g0040921 | 54.321 | 81 | 37 | 0 | 60 | 140 | 15 | 95 | 4.54e-22 | 94.7 |
| Msa1213060 | MtrunA17_Chr2g0325171 | 61.765 | 68 | 26 | 0 | 61 | 128 | 18 | 85 | 2.74e-21 | 92.4 |
| Msa1213060 | MtrunA17_Chr2g0316391 | 58.824 | 68 | 28 | 0 | 61 | 128 | 14 | 81 | 2.85e-20 | 89.0 |
| Msa1213060 | MtrunA17_Chr1g0205131 | 50.000 | 60 | 30 | 0 | 66 | 125 | 108 | 167 | 1.46e-12 | 67.8 |
| Msa1213060 | MtrunA17_Chr7g0220931 | 49.123 | 57 | 29 | 0 | 69 | 125 | 122 | 178 | 3.44e-12 | 66.6 |
| Msa1213060 | MtrunA17_Chr6g0456881 | 48.276 | 58 | 30 | 0 | 68 | 125 | 127 | 184 | 5.22e-12 | 66.2 |
| Msa1213060 | MtrunA17_Chr4g0062691 | 48.276 | 58 | 30 | 0 | 68 | 125 | 133 | 190 | 7.75e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213060 | AT5G60970.1 | 80.682 | 88 | 16 | 1 | 50 | 136 | 45 | 132 | 4.48e-46 | 160 |
| Msa1213060 | AT3G02150.1 | 44.019 | 209 | 100 | 7 | 21 | 212 | 28 | 236 | 4.31e-44 | 152 |
| Msa1213060 | AT3G02150.2 | 38.652 | 282 | 124 | 11 | 21 | 278 | 28 | 284 | 1.37e-43 | 153 |
| Msa1213060 | AT5G08070.2 | 63.810 | 105 | 34 | 2 | 32 | 136 | 2 | 102 | 9.70e-40 | 140 |
| Msa1213060 | AT5G08070.1 | 63.810 | 105 | 34 | 2 | 32 | 136 | 2 | 102 | 9.70e-40 | 140 |
| Msa1213060 | AT1G30210.2 | 55.752 | 113 | 44 | 3 | 19 | 129 | 4 | 112 | 4.16e-30 | 117 |
| Msa1213060 | AT1G30210.1 | 55.752 | 113 | 44 | 3 | 19 | 129 | 4 | 112 | 4.16e-30 | 117 |
| Msa1213060 | AT4G18390.1 | 68.493 | 73 | 23 | 0 | 57 | 129 | 32 | 104 | 3.21e-28 | 112 |
| Msa1213060 | AT4G18390.2 | 68.493 | 73 | 23 | 0 | 57 | 129 | 32 | 104 | 3.21e-28 | 112 |
| Msa1213060 | AT1G53230.1 | 57.500 | 80 | 31 | 1 | 61 | 137 | 43 | 122 | 2.57e-23 | 99.4 |
| Msa1213060 | AT1G53230.2 | 57.500 | 80 | 31 | 1 | 61 | 137 | 43 | 122 | 2.57e-23 | 99.4 |
| Msa1213060 | AT3G15030.2 | 61.765 | 68 | 26 | 0 | 61 | 128 | 39 | 106 | 5.13e-22 | 96.3 |
| Msa1213060 | AT3G15030.4 | 61.765 | 68 | 26 | 0 | 61 | 128 | 39 | 106 | 5.13e-22 | 96.3 |
| Msa1213060 | AT3G15030.3 | 61.765 | 68 | 26 | 0 | 61 | 128 | 39 | 106 | 5.13e-22 | 96.3 |
| Msa1213060 | AT3G15030.1 | 61.765 | 68 | 26 | 0 | 61 | 128 | 39 | 106 | 5.13e-22 | 96.3 |
| Msa1213060 | AT2G31070.1 | 60.606 | 66 | 26 | 0 | 60 | 125 | 22 | 87 | 2.55e-20 | 90.5 |
| Msa1213060 | AT1G68800.2 | 46.269 | 67 | 36 | 0 | 59 | 125 | 104 | 170 | 1.28e-14 | 74.3 |
| Msa1213060 | AT1G68800.1 | 46.269 | 67 | 36 | 0 | 59 | 125 | 104 | 170 | 1.30e-14 | 73.9 |
| Msa1213060 | AT1G67260.2 | 41.429 | 70 | 41 | 0 | 56 | 125 | 76 | 145 | 8.31e-14 | 71.6 |
| Msa1213060 | AT1G67260.3 | 41.429 | 70 | 41 | 0 | 56 | 125 | 76 | 145 | 8.31e-14 | 71.6 |
| Msa1213060 | AT1G67260.1 | 41.429 | 70 | 41 | 0 | 56 | 125 | 76 | 145 | 1.00e-13 | 71.6 |
| Msa1213060 | AT3G18550.2 | 39.024 | 82 | 49 | 1 | 44 | 125 | 126 | 206 | 2.54e-12 | 67.8 |
| Msa1213060 | AT3G18550.1 | 39.024 | 82 | 49 | 1 | 44 | 125 | 126 | 206 | 2.57e-12 | 67.8 |
| Msa1213060 | AT3G18550.4 | 39.024 | 82 | 49 | 1 | 44 | 125 | 126 | 206 | 2.57e-12 | 67.8 |
| Msa1213060 | AT3G18550.3 | 39.024 | 82 | 49 | 1 | 44 | 125 | 126 | 206 | 3.26e-12 | 67.4 |
Find 53 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTCTAAACGGCGAATTTAT+TGG | 0.202116 | 8_1:-73081755 | None:intergenic |
| GAAATAAATTACCATGATTA+TGG | 0.231308 | 8_1:-73081490 | None:intergenic |
| ACTCTATCTTTATCACAATT+TGG | 0.233467 | 8_1:+73081464 | Msa1213060:CDS |
| CGTGACACTCTCACTATTCT+TGG | 0.252002 | 8_1:-73081044 | None:intergenic |
| TACTACCTGGTTGCTGAAAT+AGG | 0.258592 | 8_1:-73081295 | None:intergenic |
| CTACCATAACTACCCATTTC+TGG | 0.267833 | 8_1:-73081828 | None:intergenic |
| AGCAAAGTTTGTACAATTAG+AGG | 0.287849 | 8_1:+73081092 | Msa1213060:CDS |
| TGATGTAGCTATTGCTTTGT+TGG | 0.307657 | 8_1:-73080997 | None:intergenic |
| CTTGAAGGATCCAAGTTATA+TGG | 0.309016 | 8_1:-73081440 | None:intergenic |
| GTGAGAGTGTCACGTTCTTT+AGG | 0.317533 | 8_1:+73081053 | Msa1213060:CDS |
| GATCATAATAACACCAGAAA+TGG | 0.326102 | 8_1:+73081815 | Msa1213060:CDS |
| ACTTTCAGCTTCTTTACCTT+TGG | 0.338139 | 8_1:-73081360 | None:intergenic |
| GATTAAGAGACCGTAGGATT+AGG | 0.348209 | 8_1:+73081114 | Msa1213060:CDS |
| TGTGAATTACCAGATGAATT+AGG | 0.362279 | 8_1:-73081578 | None:intergenic |
| ACTACCTGGTTGCTGAAATA+GGG | 0.363637 | 8_1:-73081294 | None:intergenic |
| AATACTAATTATTCATCAAA+TGG | 0.403938 | 8_1:+73081407 | Msa1213060:CDS |
| CTAGTACTTATTTGATAAGA+AGG | 0.404054 | 8_1:-73081512 | None:intergenic |
| TTTATTGGAAGATGAATAGT+TGG | 0.406511 | 8_1:-73081740 | None:intergenic |
| ATATCACTACTTTCCATTGA+AGG | 0.421398 | 8_1:-73081662 | None:intergenic |
| AGAAGCTGAAAGTTCAGAAA+AGG | 0.433467 | 8_1:+73081370 | Msa1213060:CDS |
| TACTCTGAATGCTCCTTCAA+TGG | 0.440393 | 8_1:+73081649 | Msa1213060:CDS |
| TTGACAGTACCTAATTCATC+TGG | 0.458238 | 8_1:+73081569 | Msa1213060:CDS |
| AACCTAGCAAAGTTGTTGAA+TGG | 0.462940 | 8_1:+73081195 | Msa1213060:CDS |
| AGTGTTGGATGGCGTCTAAA+CGG | 0.463809 | 8_1:-73081767 | None:intergenic |
| GGATCCAAGTTATATGGAAA+AGG | 0.479271 | 8_1:-73081434 | None:intergenic |
| ATCATAATAACACCAGAAAT+GGG | 0.498797 | 8_1:+73081816 | Msa1213060:CDS |
| TGTTGCTGAGTGAAACTTTG+AGG | 0.500197 | 8_1:-73081269 | None:intergenic |
| ATGATCTGAATCAAGAAGCT+TGG | 0.500537 | 8_1:-73081798 | None:intergenic |
| ATTCAAGATCTGAACATGGT+TGG | 0.505156 | 8_1:-73081696 | None:intergenic |
| AGAAGGTGAACATGGAAGAA+TGG | 0.508923 | 8_1:+73080959 | Msa1213060:CDS |
| GATAAAGATAGAGTACTTGA+AGG | 0.512410 | 8_1:-73081455 | None:intergenic |
| AACCATTCAACAACTTTGCT+AGG | 0.525009 | 8_1:-73081197 | None:intergenic |
| GAAGCTGAAAGTTCAGAAAA+GGG | 0.530447 | 8_1:+73081371 | Msa1213060:CDS |
| GCATGCAGGAGAAAACAGTT+AGG | 0.537584 | 8_1:+73080883 | Msa1213060:intron |
| AGCTTGGAACTAAACAGTGT+TGG | 0.544286 | 8_1:-73081782 | None:intergenic |
| TCATATAACTGAATTGCTGT+TGG | 0.568969 | 8_1:-73081146 | None:intergenic |
| AGAGTGTCACGTTCTTTAGG+AGG | 0.573587 | 8_1:+73081056 | Msa1213060:CDS |
| TATGGTATGAATCAAACCAA+AGG | 0.575151 | 8_1:+73081344 | Msa1213060:CDS |
| CAATTTGGAAGCCATAATCA+TGG | 0.577888 | 8_1:+73081479 | Msa1213060:CDS |
| TATGATCTTCAAGATAGACT+TGG | 0.589871 | 8_1:+73081164 | Msa1213060:CDS |
| ACAAAACAAGAAGGTGAACA+TGG | 0.590894 | 8_1:+73080951 | Msa1213060:CDS |
| AAAGAAGCAACAAAACAAGA+AGG | 0.599775 | 8_1:+73080942 | Msa1213060:CDS |
| GTACAGACAACCTAATCCTA+CGG | 0.604529 | 8_1:-73081124 | None:intergenic |
| TCTTATCAAATAAGTACTAG+TGG | 0.608228 | 8_1:+73081515 | Msa1213060:CDS |
| TGGAATGAAAGAACTAGTTG+AGG | 0.611182 | 8_1:-73081720 | None:intergenic |
| GATGGCAATGGCATAACAGA+AGG | 0.624451 | 8_1:-73081614 | None:intergenic |
| TGGAACTAAACAGTGTTGGA+TGG | 0.631286 | 8_1:-73081778 | None:intergenic |
| AAACTTTGAGGAATATCAAG+TGG | 0.636206 | 8_1:-73081257 | None:intergenic |
| CAATAGCTACATCAAGACAA+TGG | 0.639730 | 8_1:+73081006 | Msa1213060:CDS |
| CTTTGAGGAATATCAAGTGG+TGG | 0.640320 | 8_1:-73081254 | None:intergenic |
| CAAACCCTATTTCAGCAACC+AGG | 0.642234 | 8_1:+73081290 | Msa1213060:CDS |
| TTAGAGGATTAAGAGACCGT+AGG | 0.643012 | 8_1:+73081108 | Msa1213060:CDS |
| AGGAATTCAAGATCTGAACA+TGG | 0.663463 | 8_1:-73081700 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+GGG | - | chr8_1:73079777-73079796 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | - | chr8_1:73079778-73079797 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | + | chr8_1:73079777-73079796 | Msa1213060:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | + | chr8_1:73079778-73079797 | Msa1213060:intron | 0.0% |
| !! | AATATAAATAAATAAATAAA+AGG | - | chr8_1:73080191-73080210 | None:intergenic | 0.0% |
| !!! | GTATGATTTTTTTTTTTTTT+AGG | - | chr8_1:73079998-73080017 | None:intergenic | 10.0% |
| !! | AATATTACAAATTAAATCTA+TGG | + | chr8_1:73080019-73080038 | Msa1213060:intron | 10.0% |
| !!! | AATAATTTTGCATTAATTAA+CGG | - | chr8_1:73080218-73080237 | None:intergenic | 10.0% |
| !!! | TAATTTTTTTGTTTTGTTGA+GGG | + | chr8_1:73080163-73080182 | Msa1213060:intron | 15.0% |
| !! | TGAACAATTTAATGTTAATT+AGG | - | chr8_1:73080277-73080296 | None:intergenic | 15.0% |
| !!! | TAACATTAAATTGTTCATTT+TGG | + | chr8_1:73080280-73080299 | Msa1213060:intron | 15.0% |
| !! | AATACTAATTATTCATCAAA+TGG | + | chr8_1:73081407-73081426 | Msa1213060:CDS | 15.0% |
| !!! | TCCAACTTTTCTTTATTAAA+AGG | - | chr8_1:73079677-73079696 | None:intergenic | 20.0% |
| !! | CAAAATCACTATAAAAACTA+AGG | - | chr8_1:73079861-73079880 | None:intergenic | 20.0% |
| !!! | CTAATTTTTTTGTTTTGTTG+AGG | + | chr8_1:73080162-73080181 | Msa1213060:intron | 20.0% |
| !! | AATCAAATCTAAACCAAATA+GGG | - | chr8_1:73080507-73080526 | None:intergenic | 20.0% |
| !! | AAATCAAATCTAAACCAAAT+AGG | - | chr8_1:73080508-73080527 | None:intergenic | 20.0% |
| !! | TATATGTTGCTACAAAATTA+TGG | - | chr8_1:73080569-73080588 | None:intergenic | 20.0% |
| !!! | ACAAAGATTTTTTTTTCAGT+TGG | - | chr8_1:73080646-73080665 | None:intergenic | 20.0% |
| !!! | TTGGCTATTTTATGAATTTT+TGG | + | chr8_1:73080778-73080797 | Msa1213060:intron | 20.0% |
| !!! | TATTACTTTTGAGAATAAGA+AGG | - | chr8_1:73080816-73080835 | None:intergenic | 20.0% |
| !! | TCTTATTCTCAAAAGTAATA+TGG | + | chr8_1:73080816-73080835 | Msa1213060:intron | 20.0% |
| !! | GAAATAAATTACCATGATTA+TGG | - | chr8_1:73081493-73081512 | None:intergenic | 20.0% |
| !! | GCCTTTTAATAAAGAAAAGT+TGG | + | chr8_1:73079673-73079692 | Msa1213060:intron | 25.0% |
| ! | AATTAAGATCCTTAAAAGTG+TGG | + | chr8_1:73079941-73079960 | Msa1213060:intron | 25.0% |
| ! | ATAGTAGTCATTAATTAAGC+TGG | + | chr8_1:73080050-73080069 | Msa1213060:intron | 25.0% |
| ! | AATTATTCCTTTGCAGAAAA+AGG | + | chr8_1:73080231-73080250 | Msa1213060:intron | 25.0% |
| !! | AAAATATTTGAAGCATGCTA+TGG | - | chr8_1:73080476-73080495 | None:intergenic | 25.0% |
| !! | AAAAAATGGTGCTAAAGAAA+TGG | - | chr8_1:73080616-73080635 | None:intergenic | 25.0% |
| !!! | TTTTTTCTAGCACATGTTTT+TGG | + | chr8_1:73080759-73080778 | Msa1213060:intron | 25.0% |
| !!! | TTTTGAGAATAAGAAGGTTA+AGG | - | chr8_1:73080810-73080829 | None:intergenic | 25.0% |
| ! | AACTGTTAGTTCAAAAACTT+TGG | - | chr8_1:73080853-73080872 | None:intergenic | 25.0% |
| !! | TTTTCCTTTTCCATATAACT+TGG | + | chr8_1:73081430-73081449 | Msa1213060:CDS | 25.0% |
| ! | ACTCTATCTTTATCACAATT+TGG | + | chr8_1:73081464-73081483 | Msa1213060:CDS | 25.0% |
| ! | CTAGTACTTATTTGATAAGA+AGG | - | chr8_1:73081515-73081534 | None:intergenic | 25.0% |
| ! | TCTTATCAAATAAGTACTAG+TGG | + | chr8_1:73081515-73081534 | Msa1213060:CDS | 25.0% |
| ! | TTTATTGGAAGATGAATAGT+TGG | - | chr8_1:73081743-73081762 | None:intergenic | 25.0% |
| ! | ATCATAATAACACCAGAAAT+GGG | + | chr8_1:73081816-73081835 | Msa1213060:CDS | 25.0% |
| CTTATTAAAACAAGTCAAGC+TGG | - | chr8_1:73079384-73079403 | None:intergenic | 30.0% | |
| !!! | CAGCTTGACTTGTTTTAATA+AGG | + | chr8_1:73079382-73079401 | Msa1213060:intron | 30.0% |
| GTTACAAACGTGAAACTTAA+AGG | - | chr8_1:73079633-73079652 | None:intergenic | 30.0% | |
| ! | ATAGGTCCTTTAAGTTTCAA+AGG | + | chr8_1:73079448-73079467 | Msa1213060:intron | 30.0% |
| !! | CTGTAACCTTTGAAACTTAA+AGG | - | chr8_1:73079602-73079621 | None:intergenic | 30.0% |
| AAGTTTCAAAGGTTACAGAT+AGG | + | chr8_1:73079459-73079478 | Msa1213060:intron | 30.0% | |
| ! | ATAGGTCCTTTAAGTTTCTA+AGG | + | chr8_1:73079477-73079496 | Msa1213060:intron | 30.0% |
| CTGAAACCTTAGAAACTTAA+AGG | - | chr8_1:73079573-73079592 | None:intergenic | 30.0% | |
| !! | AAGTTTCTAAGGTTTCAGAT+AGG | + | chr8_1:73079488-73079507 | Msa1213060:intron | 30.0% |
| GAAACAAACTCGAAACTTAA+AGG | - | chr8_1:73079515-73079534 | None:intergenic | 30.0% | |
| !! | AAGTTTCTAAGGTTTCAGAT+AGG | - | chr8_1:73079488-73079507 | None:intergenic | 30.0% |
| CTGAAACCTTAGAAACTTAA+AGG | + | chr8_1:73079573-73079592 | Msa1213060:intron | 30.0% | |
| ! | ATAGGTCCTTTAAGTTTCTA+AGG | - | chr8_1:73079477-73079496 | None:intergenic | 30.0% |
| AAGTTTCAAAGGTTACAGAT+AGG | - | chr8_1:73079459-73079478 | None:intergenic | 30.0% | |
| !! | CTGTAACCTTTGAAACTTAA+AGG | + | chr8_1:73079602-73079621 | Msa1213060:intron | 30.0% |
| ! | ATAGGTCCTTTAAGTTTCAA+AGG | - | chr8_1:73079448-73079467 | None:intergenic | 30.0% |
| GTTACAAACGTGAAACTTAA+AGG | + | chr8_1:73079633-73079652 | Msa1213060:intron | 30.0% | |
| ! | TCTTCCATTTCTTCTCTTTT+TGG | + | chr8_1:73080343-73080362 | Msa1213060:intron | 30.0% |
| ATAGCCAAAAAGAGAAGAAA+TGG | - | chr8_1:73080350-73080369 | None:intergenic | 30.0% | |
| !!! | ATTTCTTCTCTTTTTGGCTA+TGG | + | chr8_1:73080349-73080368 | Msa1213060:intron | 30.0% |
| TTACTTGAGAGAGAAAAATC+TGG | - | chr8_1:73080433-73080452 | None:intergenic | 30.0% | |
| ! | CAGTTGGTATGTGTAAAAAA+TGG | - | chr8_1:73080630-73080649 | None:intergenic | 30.0% |
| CTCAAAAGTAATATGGATCT+TGG | + | chr8_1:73080823-73080842 | Msa1213060:intron | 30.0% | |
| AAAGAAGCAACAAAACAAGA+AGG | + | chr8_1:73080942-73080961 | Msa1213060:CDS | 30.0% | |
| AGCAAAGTTTGTACAATTAG+AGG | + | chr8_1:73081092-73081111 | Msa1213060:CDS | 30.0% | |
| TCATATAACTGAATTGCTGT+TGG | - | chr8_1:73081149-73081168 | None:intergenic | 30.0% | |
| TATGATCTTCAAGATAGACT+TGG | + | chr8_1:73081164-73081183 | Msa1213060:CDS | 30.0% | |
| ! | AAACTTTGAGGAATATCAAG+TGG | - | chr8_1:73081260-73081279 | None:intergenic | 30.0% |
| TATGGTATGAATCAAACCAA+AGG | + | chr8_1:73081344-73081363 | Msa1213060:CDS | 30.0% | |
| ! | GATAAAGATAGAGTACTTGA+AGG | - | chr8_1:73081458-73081477 | None:intergenic | 30.0% |
| TGTGAATTACCAGATGAATT+AGG | - | chr8_1:73081581-73081600 | None:intergenic | 30.0% | |
| ! | AGAGTACTAGTAAAAAGTGA+TGG | - | chr8_1:73081635-73081654 | None:intergenic | 30.0% |
| ATATCACTACTTTCCATTGA+AGG | - | chr8_1:73081665-73081684 | None:intergenic | 30.0% | |
| GATCATAATAACACCAGAAA+TGG | + | chr8_1:73081815-73081834 | Msa1213060:CDS | 30.0% | |
| TTAAAACAAGTCAAGCTGGA+GGG | - | chr8_1:73079380-73079399 | None:intergenic | 35.0% | |
| ATTAAAACAAGTCAAGCTGG+AGG | - | chr8_1:73079381-73079400 | None:intergenic | 35.0% | |
| GTTTCACGTTTGTAACAGAT+AGG | + | chr8_1:73079430-73079449 | Msa1213060:intron | 35.0% | |
| !! | AGTTTCGAGTTTGTTTCAGA+TGG | + | chr8_1:73079518-73079537 | Msa1213060:intron | 35.0% |
| !! | GTTTCGAGTTTGTTTCAGAT+GGG | + | chr8_1:73079519-73079538 | Msa1213060:intron | 35.0% |
| GTTTCACGTTTGTAACAGAT+AGG | - | chr8_1:73079430-73079449 | None:intergenic | 35.0% | |
| ! | GTGTTTTGTCCAAACAAAGA+AGG | + | chr8_1:73079697-73079716 | Msa1213060:intron | 35.0% |
| CATTGAACACCTTCTTTGTT+TGG | - | chr8_1:73079709-73079728 | None:intergenic | 35.0% | |
| AAACACACCTTCACAAAAGT+TGG | + | chr8_1:73079732-73079751 | Msa1213060:intron | 35.0% | |
| ACTGCCACATAAAAACTAGT+GGG | - | chr8_1:73079821-73079840 | None:intergenic | 35.0% | |
| ! | AAGATCCTTAAAAGTGTGGT+TGG | + | chr8_1:73079945-73079964 | Msa1213060:intron | 35.0% |
| ! | AGTATCCAACCACACTTTTA+AGG | - | chr8_1:73079953-73079972 | None:intergenic | 35.0% |
| ! | TAAAAGTGTGGTTGGATACT+CGG | + | chr8_1:73079953-73079972 | Msa1213060:intron | 35.0% |
| ! | TTGAAGCATGCTATGGATTA+TGG | - | chr8_1:73080469-73080488 | None:intergenic | 35.0% |
| ! | ATTTTCTGTCAAGCCCTATT+TGG | + | chr8_1:73080491-73080510 | Msa1213060:intron | 35.0% |
| ACAAAACAAGAAGGTGAACA+TGG | + | chr8_1:73080951-73080970 | Msa1213060:CDS | 35.0% | |
| TGATGTAGCTATTGCTTTGT+TGG | - | chr8_1:73081000-73081019 | None:intergenic | 35.0% | |
| CAATAGCTACATCAAGACAA+TGG | + | chr8_1:73081006-73081025 | Msa1213060:CDS | 35.0% | |
| AACCTAGCAAAGTTGTTGAA+TGG | + | chr8_1:73081195-73081214 | Msa1213060:CDS | 35.0% | |
| AACCATTCAACAACTTTGCT+AGG | - | chr8_1:73081200-73081219 | None:intergenic | 35.0% | |
| AGAGAAAAACAAGTACTACC+TGG | - | chr8_1:73081311-73081330 | None:intergenic | 35.0% | |
| !! | GGTAGTACTTGTTTTTCTCT+TGG | + | chr8_1:73081311-73081330 | Msa1213060:CDS | 35.0% |
| !! | AGTACTTGTTTTTCTCTTGG+AGG | + | chr8_1:73081314-73081333 | Msa1213060:CDS | 35.0% |
| ACTTTCAGCTTCTTTACCTT+TGG | - | chr8_1:73081363-73081382 | None:intergenic | 35.0% | |
| AGAAGCTGAAAGTTCAGAAA+AGG | + | chr8_1:73081370-73081389 | Msa1213060:CDS | 35.0% | |
| GAAGCTGAAAGTTCAGAAAA+GGG | + | chr8_1:73081371-73081390 | Msa1213060:CDS | 35.0% | |
| GGATCCAAGTTATATGGAAA+AGG | - | chr8_1:73081437-73081456 | None:intergenic | 35.0% | |
| CTTGAAGGATCCAAGTTATA+TGG | - | chr8_1:73081443-73081462 | None:intergenic | 35.0% | |
| CAATTTGGAAGCCATAATCA+TGG | + | chr8_1:73081479-73081498 | Msa1213060:CDS | 35.0% | |
| TTGACAGTACCTAATTCATC+TGG | + | chr8_1:73081569-73081588 | Msa1213060:CDS | 35.0% | |
| CTAGTAAAAAGTGATGGCAA+TGG | - | chr8_1:73081629-73081648 | None:intergenic | 35.0% | |
| ATTCAAGATCTGAACATGGT+TGG | - | chr8_1:73081699-73081718 | None:intergenic | 35.0% | |
| AGGAATTCAAGATCTGAACA+TGG | - | chr8_1:73081703-73081722 | None:intergenic | 35.0% | |
| TGGAATGAAAGAACTAGTTG+AGG | - | chr8_1:73081723-73081742 | None:intergenic | 35.0% | |
| ATGATCTGAATCAAGAAGCT+TGG | - | chr8_1:73081801-73081820 | None:intergenic | 35.0% | |
| GGGATATAACTGAAAGAGTG+CGG | + | chr8_1:73079297-73079316 | Msa1213060:intron | 40.0% | |
| !! | CTTAACGGAGGTTGATAGAA+AGG | - | chr8_1:73079546-73079565 | None:intergenic | 40.0% |
| CTTTCTATCAACCTCCGTTA+AGG | + | chr8_1:73079544-73079563 | Msa1213060:intron | 40.0% | |
| GGTTTCAGATAGGTCCTTAA+CGG | - | chr8_1:73079561-73079580 | None:intergenic | 40.0% | |
| ! | ACACCTTCACAAAAGTTGGT+GGG | + | chr8_1:73079736-73079755 | Msa1213060:intron | 40.0% |
| !!! | CACACCCACTAGTTTTTATG+TGG | + | chr8_1:73079814-73079833 | Msa1213060:intron | 40.0% |
| CACTGCCACATAAAAACTAG+TGG | - | chr8_1:73079822-73079841 | None:intergenic | 40.0% | |
| TAGAACTTACACCATGCATG+TGG | - | chr8_1:73080145-73080164 | None:intergenic | 40.0% | |
| ! | TCTGCAACCTTTTTCTGCAA+AGG | - | chr8_1:73080241-73080260 | None:intergenic | 40.0% |
| TTTGCAGAAAAAGGTTGCAG+AGG | + | chr8_1:73080240-73080259 | Msa1213060:intron | 40.0% | |
| !!! | TCTTTTTGGCTATGGTGAAG+AGG | + | chr8_1:73080357-73080376 | Msa1213060:intron | 40.0% |
| ! | AAGCATGCTATGGATTATGG+AGG | - | chr8_1:73080466-73080485 | None:intergenic | 40.0% |
| AGTTTGTAAGTTGTGCATGC+AGG | + | chr8_1:73080869-73080888 | Msa1213060:intron | 40.0% | |
| AGAAGGTGAACATGGAAGAA+TGG | + | chr8_1:73080959-73080978 | Msa1213060:CDS | 40.0% | |
| TTAGAGGATTAAGAGACCGT+AGG | + | chr8_1:73081108-73081127 | Msa1213060:CDS | 40.0% | |
| GATTAAGAGACCGTAGGATT+AGG | + | chr8_1:73081114-73081133 | Msa1213060:CDS | 40.0% | |
| GTACAGACAACCTAATCCTA+CGG | - | chr8_1:73081127-73081146 | None:intergenic | 40.0% | |
| ! | CTTTGAGGAATATCAAGTGG+TGG | - | chr8_1:73081257-73081276 | None:intergenic | 40.0% |
| TGTTGCTGAGTGAAACTTTG+AGG | - | chr8_1:73081272-73081291 | None:intergenic | 40.0% | |
| ACTACCTGGTTGCTGAAATA+GGG | - | chr8_1:73081297-73081316 | None:intergenic | 40.0% | |
| TACTACCTGGTTGCTGAAAT+AGG | - | chr8_1:73081298-73081317 | None:intergenic | 40.0% | |
| !! | ACTTGTTTTTCTCTTGGAGG+TGG | + | chr8_1:73081317-73081336 | Msa1213060:CDS | 40.0% |
| ! | TCTCTTGGAGGTGGTTTTTA+TGG | + | chr8_1:73081326-73081345 | Msa1213060:CDS | 40.0% |
| TACTCTGAATGCTCCTTCAA+TGG | + | chr8_1:73081649-73081668 | Msa1213060:CDS | 40.0% | |
| CGTCTAAACGGCGAATTTAT+TGG | - | chr8_1:73081758-73081777 | None:intergenic | 40.0% | |
| ! | TGGAACTAAACAGTGTTGGA+TGG | - | chr8_1:73081781-73081800 | None:intergenic | 40.0% |
| AGCTTGGAACTAAACAGTGT+TGG | - | chr8_1:73081785-73081804 | None:intergenic | 40.0% | |
| AATAAGGCCAAATACGTCCC+TGG | + | chr8_1:73079398-73079417 | Msa1213060:intron | 45.0% | |
| ATAAGGCCAAATACGTCCCT+GGG | + | chr8_1:73079399-73079418 | Msa1213060:intron | 45.0% | |
| CGTGAAACTTAAAGGACCCA+GGG | - | chr8_1:73079641-73079660 | None:intergenic | 45.0% | |
| ACGTGAAACTTAAAGGACCC+AGG | - | chr8_1:73079640-73079659 | None:intergenic | 45.0% | |
| TTCAGATAGGTCCTTAACGG+AGG | - | chr8_1:73079558-73079577 | None:intergenic | 45.0% | |
| ACGTGAAACTTAAAGGACCC+AGG | + | chr8_1:73079640-73079659 | Msa1213060:intron | 45.0% | |
| CGTGAAACTTAAAGGACCCA+GGG | + | chr8_1:73079641-73079660 | Msa1213060:intron | 45.0% | |
| AAAAGGCCAAATACCTCCCT+GGG | - | chr8_1:73079660-73079679 | None:intergenic | 45.0% | |
| TAAAAGGCCAAATACCTCCC+TGG | - | chr8_1:73079661-73079680 | None:intergenic | 45.0% | |
| CACACCTTCACAAAAGTTGG+TGG | + | chr8_1:73079735-73079754 | Msa1213060:intron | 45.0% | |
| ! | ACACCCACCAACTTTTGTGA+AGG | - | chr8_1:73079742-73079761 | None:intergenic | 45.0% |
| GCATGCAGGAGAAAACAGTT+AGG | + | chr8_1:73080883-73080902 | Msa1213060:intron | 45.0% | |
| CGTGACACTCTCACTATTCT+TGG | - | chr8_1:73081047-73081066 | None:intergenic | 45.0% | |
| !! | GTGAGAGTGTCACGTTCTTT+AGG | + | chr8_1:73081053-73081072 | Msa1213060:CDS | 45.0% |
| ! | AGAGTGTCACGTTCTTTAGG+AGG | + | chr8_1:73081056-73081075 | Msa1213060:CDS | 45.0% |
| CAAACCCTATTTCAGCAACC+AGG | + | chr8_1:73081290-73081309 | Msa1213060:CDS | 45.0% | |
| GATGGCAATGGCATAACAGA+AGG | - | chr8_1:73081617-73081636 | None:intergenic | 45.0% | |
| ! | AGTGTTGGATGGCGTCTAAA+CGG | - | chr8_1:73081770-73081789 | None:intergenic | 45.0% |
| !!! | TATGATTTTTTTTTTTTTTA+GGG | - | chr8_1:73079997-73080016 | None:intergenic | 5.0% |
| ! | TACGGCGTTGAAGAGTTGGA+GGG | + | chr8_1:73079277-73079296 | Msa1213060:intron | 50.0% |
| AAAGGACCCAGGGACGTATT+TGG | - | chr8_1:73079408-73079427 | None:intergenic | 50.0% | |
| GAAACTTAAAGGACCCAGGG+AGG | + | chr8_1:73079644-73079663 | Msa1213060:intron | 50.0% | |
| !! | AAAGGACCCAGGGAGGTATT+TGG | + | chr8_1:73079651-73079670 | Msa1213060:intron | 50.0% |
| !! | GTTTGACGTGCCACTTATGC+AGG | + | chr8_1:73080116-73080135 | Msa1213060:intron | 50.0% |
| CATGTGGCATCCTGCATAAG+TGG | - | chr8_1:73080129-73080148 | None:intergenic | 50.0% | |
| TATGCAGGATGCCACATGCA+TGG | + | chr8_1:73080131-73080150 | Msa1213060:intron | 50.0% | |
| ! | GTGGTACGGCGTTGAAGAGT+TGG | + | chr8_1:73079273-73079292 | Msa1213060:intron | 55.0% |
| ! | GTACGGCGTTGAAGAGTTGG+AGG | + | chr8_1:73079276-73079295 | Msa1213060:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 73079270 | 73081841 | 73079270 | ID=Msa1213060;Name=Msa1213060 |
| chr8_1 | mRNA | 73079270 | 73081841 | 73079270 | ID=Msa1213060-mRNA-1;Parent=Msa1213060;Name=Msa1213060-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|0.33|0|0.33|3|0|320 |
| chr8_1 | exon | 73079270 | 73079275 | 73079270 | ID=Msa1213060-mRNA-1:exon:24731;Parent=Msa1213060-mRNA-1 |
| chr8_1 | exon | 73080247 | 73080252 | 73080247 | ID=Msa1213060-mRNA-1:exon:24732;Parent=Msa1213060-mRNA-1 |
| chr8_1 | exon | 73080891 | 73081841 | 73080891 | ID=Msa1213060-mRNA-1:exon:24733;Parent=Msa1213060-mRNA-1 |
| chr8_1 | CDS | 73079270 | 73079275 | 73079270 | ID=Msa1213060-mRNA-1:cds;Parent=Msa1213060-mRNA-1 |
| chr8_1 | CDS | 73080247 | 73080252 | 73080247 | ID=Msa1213060-mRNA-1:cds;Parent=Msa1213060-mRNA-1 |
| chr8_1 | CDS | 73080891 | 73081841 | 73080891 | ID=Msa1213060-mRNA-1:cds;Parent=Msa1213060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
