Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0498560 | XP_003599789.2 | 83.843 | 229 | 7 | 1 | 1 | 229 | 52 | 250 | 1.94e-130 | 378 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0498560 | sp|Q0WPS2|B561M_ARATH | 46.544 | 217 | 83 | 3 | 1 | 214 | 53 | 239 | 7.64e-64 | 202 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0498560 | A0A3Q0EK09 | 68.067 | 238 | 36 | 5 | 1 | 229 | 1 | 207 | 2.34e-102 | 304 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004540 | Msa0498560 | 0.823767 | 1.159844e-53 | -8.615850e-47 |
| Msa0006880 | Msa0498560 | 0.821989 | 3.010997e-53 | -8.615850e-47 |
| Msa0008090 | Msa0498560 | 0.826744 | 2.293672e-54 | -8.615850e-47 |
| Msa0008410 | Msa0498560 | 0.814194 | 1.744634e-51 | -8.615850e-47 |
| Msa0012940 | Msa0498560 | 0.810689 | 1.017425e-50 | -8.615850e-47 |
| Msa0029630 | Msa0498560 | 0.801332 | 9.464621e-49 | -8.615850e-47 |
| Msa0031820 | Msa0498560 | 0.811452 | 6.951827e-51 | -8.615850e-47 |
| Msa0033880 | Msa0498560 | 0.841988 | 3.402421e-58 | -8.615850e-47 |
| Msa0038000 | Msa0498560 | 0.807411 | 5.121023e-50 | -8.615850e-47 |
| Msa0039250 | Msa0498560 | 0.823594 | 1.273684e-53 | -8.615850e-47 |
| Msa0041690 | Msa0498560 | 0.810823 | 9.517313e-51 | -8.615850e-47 |
| Msa0043860 | Msa0498560 | 0.800265 | 1.562874e-48 | -8.615850e-47 |
| Msa0048180 | Msa0498560 | 0.828862 | 7.099398e-55 | -8.615850e-47 |
| Msa0057610 | Msa0498560 | 0.825836 | 3.771916e-54 | -8.615850e-47 |
| Msa0070430 | Msa0498560 | 0.821525 | 3.855523e-53 | -8.615850e-47 |
| Msa0073670 | Msa0498560 | 0.821534 | 3.836163e-53 | -8.615850e-47 |
| Msa0076040 | Msa0498560 | 0.817359 | 3.436176e-52 | -8.615850e-47 |
| Msa0081650 | Msa0498560 | 0.803496 | 3.391545e-49 | -8.615850e-47 |
| Msa0091610 | Msa0498560 | 0.810259 | 1.260040e-50 | -8.615850e-47 |
| Msa0097600 | Msa0498560 | 0.802982 | 4.331176e-49 | -8.615850e-47 |
| Msa0097950 | Msa0498560 | 0.840705 | 7.402103e-58 | -8.615850e-47 |
| Msa0101180 | Msa0498560 | 0.801849 | 7.414963e-49 | -8.615850e-47 |
| Msa0115370 | Msa0498560 | 0.843453 | 1.388301e-58 | -8.615850e-47 |
| Msa0123510 | Msa0498560 | 0.817148 | 3.831730e-52 | -8.615850e-47 |
| Msa0125540 | Msa0498560 | 0.804352 | 2.251222e-49 | -8.615850e-47 |
| Msa0127040 | Msa0498560 | 0.811271 | 7.611031e-51 | -8.615850e-47 |
| Msa0127850 | Msa0498560 | 0.860616 | 1.824860e-63 | -8.615850e-47 |
| Msa0130240 | Msa0498560 | 0.832289 | 1.029156e-55 | -8.615850e-47 |
| Msa0133720 | Msa0498560 | 0.809093 | 2.243033e-50 | -8.615850e-47 |
| Msa0133820 | Msa0498560 | 0.804419 | 2.180069e-49 | -8.615850e-47 |
| Msa0136120 | Msa0498560 | 0.829356 | 5.388627e-55 | -8.615850e-47 |
| Msa0138360 | Msa0498560 | 0.809661 | 1.694257e-50 | -8.615850e-47 |
| Msa0140300 | Msa0498560 | 0.812454 | 4.205575e-51 | -8.615850e-47 |
| Msa0146080 | Msa0498560 | 0.802293 | 6.008717e-49 | -8.615850e-47 |
| Msa0147980 | Msa0498560 | 0.821402 | 4.115120e-53 | -8.615850e-47 |
| Msa0149390 | Msa0498560 | 0.805527 | 1.278462e-49 | -8.615850e-47 |
| Msa0166750 | Msa0498560 | 0.826989 | 2.004371e-54 | -8.615850e-47 |
| Msa0167480 | Msa0498560 | 0.825070 | 5.726565e-54 | -8.615850e-47 |
| Msa0173890 | Msa0498560 | 0.807722 | 4.399350e-50 | -8.615850e-47 |
| Msa0174000 | Msa0498560 | 0.833171 | 6.215708e-56 | -8.615850e-47 |
| Msa0174770 | Msa0498560 | 0.804430 | 2.168676e-49 | -8.615850e-47 |
| Msa0181610 | Msa0498560 | 0.817858 | 2.651956e-52 | -8.615850e-47 |
| Msa0198520 | Msa0498560 | 0.815240 | 1.023208e-51 | -8.615850e-47 |
| Msa0198530 | Msa0498560 | 0.821686 | 3.538586e-53 | -8.615850e-47 |
| Msa0202830 | Msa0498560 | 0.809196 | 2.132835e-50 | -8.615850e-47 |
| Msa0221600 | Msa0498560 | 0.818479 | 1.918545e-52 | -8.615850e-47 |
| Msa0231100 | Msa0498560 | 0.802875 | 4.557840e-49 | -8.615850e-47 |
| Msa0370160 | Msa0498560 | -0.802473 | 5.517118e-49 | -8.615850e-47 |
| Msa0384670 | Msa0498560 | 0.803801 | 2.931601e-49 | -8.615850e-47 |
| Msa0384880 | Msa0498560 | 0.811739 | 6.021020e-51 | -8.615850e-47 |
| Msa0405650 | Msa0498560 | 0.913573 | 5.258594e-84 | -8.615850e-47 |
| Msa0411410 | Msa0498560 | 0.802574 | 5.259278e-49 | -8.615850e-47 |
| Msa0413450 | Msa0498560 | 0.802334 | 5.894367e-49 | -8.615850e-47 |
| Msa0431770 | Msa0498560 | 0.802431 | 5.629573e-49 | -8.615850e-47 |
| Msa0432070 | Msa0498560 | 0.801337 | 9.441868e-49 | -8.615850e-47 |
| Msa0434570 | Msa0498560 | 0.812391 | 4.339987e-51 | -8.615850e-47 |
| Msa0434770 | Msa0498560 | 0.818277 | 2.132374e-52 | -8.615850e-47 |
| Msa0436200 | Msa0498560 | 0.821562 | 3.780424e-53 | -8.615850e-47 |
| Msa0439230 | Msa0498560 | 0.818808 | 1.615239e-52 | -8.615850e-47 |
| Msa0443390 | Msa0498560 | 0.804024 | 2.634451e-49 | -8.615850e-47 |
| Msa0451150 | Msa0498560 | 0.866058 | 3.762471e-65 | -8.615850e-47 |
| Msa0478580 | Msa0498560 | 0.827534 | 1.483240e-54 | -8.615850e-47 |
| Msa0239450 | Msa0498560 | 0.851631 | 7.825133e-61 | -8.615850e-47 |
| Msa0244980 | Msa0498560 | 0.813138 | 2.978744e-51 | -8.615850e-47 |
| Msa0249540 | Msa0498560 | 0.833579 | 4.918202e-56 | -8.615850e-47 |
| Msa0262480 | Msa0498560 | 0.824336 | 8.527929e-54 | -8.615850e-47 |
| Msa0275360 | Msa0498560 | 0.801575 | 8.441840e-49 | -8.615850e-47 |
| Msa0283420 | Msa0498560 | 0.823312 | 1.482617e-53 | -8.615850e-47 |
| Msa0291520 | Msa0498560 | 0.804431 | 2.167348e-49 | -8.615850e-47 |
| Msa0296250 | Msa0498560 | 0.812739 | 3.644012e-51 | -8.615850e-47 |
| Msa0304590 | Msa0498560 | 0.813627 | 2.326059e-51 | -8.615850e-47 |
| Msa0304660 | Msa0498560 | 0.827957 | 1.173828e-54 | -8.615850e-47 |
| Msa0322590 | Msa0498560 | 0.814763 | 1.305551e-51 | -8.615850e-47 |
| Msa0322900 | Msa0498560 | 0.807958 | 3.920310e-50 | -8.615850e-47 |
| Msa0331700 | Msa0498560 | 0.831291 | 1.814156e-55 | -8.615850e-47 |
| Msa0343190 | Msa0498560 | 0.825522 | 4.477291e-54 | -8.615850e-47 |
| Msa0358670 | Msa0498560 | 0.870504 | 1.388502e-66 | -8.615850e-47 |
| Msa0363060 | Msa0498560 | 0.815892 | 7.322492e-52 | -8.615850e-47 |
| Msa0363810 | Msa0498560 | 0.831484 | 1.626494e-55 | -8.615850e-47 |
| Msa0484290 | Msa0498560 | 0.823650 | 1.235767e-53 | -8.615850e-47 |
| Msa0484740 | Msa0498560 | 0.830165 | 3.423543e-55 | -8.615850e-47 |
| Msa0490820 | Msa0498560 | 0.809267 | 2.058670e-50 | -8.615850e-47 |
| Msa0498560 | Msa0509120 | 0.807046 | 6.119109e-50 | -8.615850e-47 |
| Msa0498560 | Msa0511770 | 0.820637 | 6.172720e-53 | -8.615850e-47 |
| Msa0498560 | Msa0518030 | 0.800051 | 1.727910e-48 | -8.615850e-47 |
| Msa0498560 | Msa0524590 | 0.814335 | 1.623336e-51 | -8.615850e-47 |
| Msa0498560 | Msa0531250 | 0.817680 | 2.907683e-52 | -8.615850e-47 |
| Msa0498560 | Msa0534750 | 0.803587 | 3.245951e-49 | -8.615850e-47 |
| Msa0498560 | Msa0547020 | 0.803671 | 3.119434e-49 | -8.615850e-47 |
| Msa0498560 | Msa0547990 | 0.829123 | 6.139724e-55 | -8.615850e-47 |
| Msa0498560 | Msa0552810 | 0.823020 | 1.734524e-53 | -8.615850e-47 |
| Msa0498560 | Msa0561430 | 0.810223 | 1.282770e-50 | -8.615850e-47 |
| Msa0498560 | Msa0578090 | 0.834646 | 2.657033e-56 | -8.615850e-47 |
| Msa0498560 | Msa0581070 | 0.818855 | 1.576469e-52 | -8.615850e-47 |
| Msa0498560 | Msa0584550 | 0.830558 | 2.744853e-55 | -8.615850e-47 |
| Msa0498560 | Msa0586850 | 0.829113 | 6.174129e-55 | -8.615850e-47 |
| Msa0498560 | Msa0588090 | 0.801918 | 7.177162e-49 | -8.615850e-47 |
| Msa0498560 | Msa0593700 | 0.836458 | 9.250960e-57 | -8.615850e-47 |
| Msa0498560 | Msa0599900 | 0.801558 | 8.507821e-49 | -8.615850e-47 |
| Msa0498560 | Msa0606810 | 0.828167 | 1.045058e-54 | -8.615850e-47 |
| Msa0498560 | Msa0628420 | 0.819116 | 1.374844e-52 | -8.615850e-47 |
| Msa0498560 | Msa0633570 | 0.832232 | 1.063276e-55 | -8.615850e-47 |
| Msa0498560 | Msa0634490 | 0.801075 | 1.068479e-48 | -8.615850e-47 |
| Msa0498560 | Msa0644030 | 0.819600 | 1.066632e-52 | -8.615850e-47 |
| Msa0498560 | Msa0652300 | 0.817539 | 3.129589e-52 | -8.615850e-47 |
| Msa0498560 | Msa0654870 | 0.812626 | 3.856143e-51 | -8.615850e-47 |
| Msa0498560 | Msa0658480 | 0.806049 | 9.932967e-50 | -8.615850e-47 |
| Msa0498560 | Msa0659990 | 0.828364 | 9.364955e-55 | -8.615850e-47 |
| Msa0498560 | Msa0662630 | 0.834209 | 3.421970e-56 | -8.615850e-47 |
| Msa0498560 | Msa0664760 | 0.816953 | 4.239761e-52 | -8.615850e-47 |
| Msa0498560 | Msa0666230 | 0.836064 | 1.164407e-56 | -8.615850e-47 |
| Msa0498560 | Msa0673270 | 0.820886 | 5.412651e-53 | -8.615850e-47 |
| Msa0498560 | Msa0679100 | 0.825522 | 4.478525e-54 | -8.615850e-47 |
| Msa0498560 | Msa0683780 | 0.813539 | 2.432177e-51 | -8.615850e-47 |
| Msa0498560 | Msa0687630 | 0.807765 | 4.308251e-50 | -8.615850e-47 |
| Msa0498560 | Msa0689500 | 0.817581 | 3.061924e-52 | -8.615850e-47 |
| Msa0498560 | Msa0697720 | 0.808098 | 3.659636e-50 | -8.615850e-47 |
| Msa0498560 | Msa0699360 | 0.800519 | 1.387343e-48 | -8.615850e-47 |
| Msa0498560 | Msa0713820 | 0.800204 | 1.608333e-48 | -8.615850e-47 |
| Msa0498560 | Msa0716410 | 0.801058 | 1.077072e-48 | -8.615850e-47 |
| Msa0498560 | Msa0734960 | 0.829727 | 4.379679e-55 | -8.615850e-47 |
| Msa0498560 | Msa0744100 | 0.818570 | 1.829570e-52 | -8.615850e-47 |
| Msa0498560 | Msa0750920 | 0.804196 | 2.425737e-49 | -8.615850e-47 |
| Msa0498560 | Msa0752510 | 0.802459 | 5.553997e-49 | -8.615850e-47 |
| Msa0498560 | Msa0756930 | 0.807698 | 4.450438e-50 | -8.615850e-47 |
| Msa0498560 | Msa0814630 | -0.802421 | 5.655816e-49 | -8.615850e-47 |
| Msa0498560 | Msa0818770 | 0.800229 | 1.589215e-48 | -8.615850e-47 |
| Msa0498560 | Msa0822170 | 0.803036 | 4.222057e-49 | -8.615850e-47 |
| Msa0498560 | Msa0824640 | 0.808849 | 2.530130e-50 | -8.615850e-47 |
| Msa0498560 | Msa0825270 | 0.822976 | 1.775650e-53 | -8.615850e-47 |
| Msa0498560 | Msa0836500 | 0.818739 | 1.675410e-52 | -8.615850e-47 |
| Msa0498560 | Msa0855160 | -0.805605 | 1.231269e-49 | -8.615850e-47 |
| Msa0498560 | Msa0864010 | 0.803336 | 3.660325e-49 | -8.615850e-47 |
| Msa0498560 | Msa0869010 | 0.800452 | 1.431861e-48 | -8.615850e-47 |
| Msa0498560 | Msa0879850 | 0.819467 | 1.143662e-52 | -8.615850e-47 |
| Msa0498560 | Msa0888940 | 0.825208 | 5.312754e-54 | -8.615850e-47 |
| Msa0498560 | Msa0898660 | 0.817776 | 2.766624e-52 | -8.615850e-47 |
| Msa0498560 | Msa0899290 | 0.803897 | 2.799498e-49 | -8.615850e-47 |
| Msa0498560 | Msa0943170 | 0.822917 | 1.832485e-53 | -8.615850e-47 |
| Msa0498560 | Msa0963020 | 0.842605 | 2.335664e-58 | -8.615850e-47 |
| Msa0498560 | Msa0967370 | 0.800827 | 1.200715e-48 | -8.615850e-47 |
| Msa0498560 | Msa0980940 | 0.833134 | 6.348994e-56 | -8.615850e-47 |
| Msa0498560 | Msa0997430 | 0.820693 | 5.995310e-53 | -8.615850e-47 |
| Msa0498560 | Msa0998590 | 0.808369 | 3.204619e-50 | -8.615850e-47 |
| Msa0498560 | Msa1004420 | 0.809771 | 1.605021e-50 | -8.615850e-47 |
| Msa0498560 | Msa1010460 | 0.804203 | 2.418329e-49 | -8.615850e-47 |
| Msa0498560 | Msa1019240 | 0.802194 | 6.299004e-49 | -8.615850e-47 |
| Msa0498560 | Msa1019260 | 0.802033 | 6.797459e-49 | -8.615850e-47 |
| Msa0498560 | Msa1027250 | 0.806191 | 9.272663e-50 | -8.615850e-47 |
| Msa0498560 | Msa1027360 | 0.805841 | 1.098420e-49 | -8.615850e-47 |
| Msa0498560 | Msa1028290 | 0.808453 | 3.074726e-50 | -8.615850e-47 |
| Msa0498560 | Msa1037510 | 0.819314 | 1.239392e-52 | -8.615850e-47 |
| Msa0498560 | Msa1055010 | 0.820746 | 5.829230e-53 | -8.615850e-47 |
| Msa0498560 | Msa1083880 | 0.809320 | 2.005502e-50 | -8.615850e-47 |
| Msa0498560 | Msa1097820 | 0.801531 | 8.619296e-49 | -8.615850e-47 |
| Msa0498560 | Msa1111810 | 0.802090 | 6.615119e-49 | -8.615850e-47 |
| Msa0498560 | Msa1113590 | 0.816217 | 6.195272e-52 | -8.615850e-47 |
| Msa0498560 | Msa1123350 | 0.819013 | 1.451346e-52 | -8.615850e-47 |
| Msa0498560 | Msa1126510 | 0.804524 | 2.073198e-49 | -8.615850e-47 |
| Msa0498560 | Msa1127540 | 0.841243 | 5.346757e-58 | -8.615850e-47 |
| Msa0498560 | Msa1127590 | 0.818374 | 2.027206e-52 | -8.615850e-47 |
| Msa0498560 | Msa1131560 | 0.807461 | 4.998029e-50 | -8.615850e-47 |
| Msa0498560 | Msa1145240 | 0.816933 | 4.284055e-52 | -8.615850e-47 |
| Msa0498560 | Msa1166870 | 0.824395 | 8.262153e-54 | -8.615850e-47 |
| Msa0498560 | Msa1173900 | 0.813963 | 1.961965e-51 | -8.615850e-47 |
| Msa0498560 | Msa1174100 | 0.816899 | 4.358800e-52 | -8.615850e-47 |
| Msa0498560 | Msa1174530 | 0.809793 | 1.587510e-50 | -8.615850e-47 |
| Msa0498560 | Msa1179980 | 0.803533 | 3.331740e-49 | -8.615850e-47 |
| Msa0498560 | Msa1184370 | 0.834069 | 3.709905e-56 | -8.615850e-47 |
| Msa0498560 | Msa1192850 | 0.825014 | 5.905635e-54 | -8.615850e-47 |
| Msa0498560 | Msa1201830 | 0.850274 | 1.887772e-60 | -8.615850e-47 |
| Msa0498560 | Msa1202580 | 0.820800 | 5.664912e-53 | -8.615850e-47 |
| Msa0498560 | Msa1205850 | 0.800104 | 1.685091e-48 | -8.615850e-47 |
| Msa0498560 | Msa1206650 | 0.802256 | 6.115067e-49 | -8.615850e-47 |
| Msa0498560 | Msa1207730 | 0.822861 | 1.888267e-53 | -8.615850e-47 |
| Msa0498560 | Msa1211830 | 0.820298 | 7.384587e-53 | -8.615850e-47 |
| Msa0498560 | Msa1214320 | 0.805787 | 1.127976e-49 | -8.615850e-47 |
| Msa0498560 | Msa1227690 | 0.858806 | 6.397941e-63 | -8.615850e-47 |
| Msa0498560 | Msa1235250 | 0.821460 | 3.991385e-53 | -8.615850e-47 |
| Msa0498560 | Msa1254710 | 0.813222 | 2.855067e-51 | -8.615850e-47 |
| Msa0498560 | Msa1270690 | 0.800924 | 1.147178e-48 | -8.615850e-47 |
| Msa0498560 | Msa1294840 | 0.835975 | 1.226693e-56 | -8.615850e-47 |
| Msa0498560 | Msa1299700 | 0.813294 | 2.753294e-51 | -8.615850e-47 |
| Msa0498560 | Msa1306990 | 0.807584 | 4.707569e-50 | -8.615850e-47 |
| Msa0498560 | Msa1310690 | 0.812779 | 3.569760e-51 | -8.615850e-47 |
| Msa0498560 | Msa1320820 | 0.823070 | 1.687854e-53 | -8.615850e-47 |
| Msa0498560 | Msa1327490 | 0.820963 | 5.194777e-53 | -8.615850e-47 |
| Msa0498560 | Msa1329450 | 0.815833 | 7.550113e-52 | -8.615850e-47 |
| Msa0498560 | Msa1333560 | 0.811542 | 6.647423e-51 | -8.615850e-47 |
| Msa0498560 | Msa1333970 | 0.803788 | 2.949547e-49 | -8.615850e-47 |
| Msa0498560 | Msa1344310 | 0.810032 | 1.410419e-50 | -8.615850e-47 |
| Msa0498560 | Msa1344850 | 0.809467 | 1.865497e-50 | -8.615850e-47 |
| Msa0498560 | Msa1345450 | 0.817764 | 2.783744e-52 | -8.615850e-47 |
| Msa0498560 | Msa1356610 | 0.816394 | 5.656964e-52 | -8.615850e-47 |
| Msa0498560 | Msa1362420 | 0.830082 | 3.586915e-55 | -8.615850e-47 |
| Msa0498560 | Msa1373820 | 0.808605 | 2.853537e-50 | -8.615850e-47 |
| Msa0498560 | Msa1411950 | 0.832805 | 7.666216e-56 | -8.615850e-47 |
| Msa0498560 | Msa1432480 | 0.827366 | 1.627526e-54 | -8.615850e-47 |
| Msa0498560 | Msa1433600 | 0.805904 | 1.065673e-49 | -8.615850e-47 |
| Msa0498560 | Msa1435770 | 0.816446 | 5.506445e-52 | -8.615850e-47 |
| Msa0498560 | Msa1442850 | 0.810613 | 1.056821e-50 | -8.615850e-47 |
| Msa0498560 | Msa1443930 | 0.820469 | 6.746853e-53 | -8.615850e-47 |
| Msa0498560 | Msa1450280 | 0.813026 | 3.151567e-51 | -8.615850e-47 |
| Msa0498560 | Msa1465080 | 0.806686 | 7.290824e-50 | -8.615850e-47 |
| Msa0498560 | Msa1466090 | 0.811546 | 6.631917e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0498560 | MtrunA17_Chr3g0096101 | 83.843 | 229 | 7 | 1 | 1 | 229 | 52 | 250 | 1.79e-134 | 378 |
| Msa0498560 | MtrunA17_Chr4g0052201 | 47.368 | 209 | 79 | 2 | 8 | 215 | 54 | 232 | 1.13e-62 | 196 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0498560 | AT4G18260.1 | 46.544 | 217 | 83 | 3 | 1 | 214 | 53 | 239 | 7.77e-65 | 202 |
| Msa0498560 | AT2G30890.1 | 43.421 | 228 | 98 | 2 | 1 | 227 | 45 | 242 | 1.00e-61 | 194 |
Find 49 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAATATTGCAAGTTAAATT+TGG | 0.205495 | 3_4:-35343814 | Msa0498560:three_prime_UTR |
| AGATTAGGGGTTGCACTTTA+TGG | 0.214906 | 3_4:-35345263 | Msa0498560:CDS |
| CATCAAAAGGCATAAGAATT+TGG | 0.238501 | 3_4:-35344153 | Msa0498560:CDS |
| CTTTCTCCTTTGGGCTTCAA+TGG | 0.240506 | 3_4:-35346393 | Msa0498560:CDS |
| ACAATAATCATCAAAGATTA+GGG | 0.240819 | 3_4:-35345277 | Msa0498560:CDS |
| CATTACATGGCTTTCTCCTT+TGG | 0.245393 | 3_4:-35346403 | Msa0498560:CDS |
| GAACCATACACTTCTTCTTT+TGG | 0.257377 | 3_4:+35344261 | None:intergenic |
| TTGCACTTTATGGTGTTATC+TGG | 0.283526 | 3_4:-35345253 | Msa0498560:CDS |
| ATTACATGGCTTTCTCCTTT+GGG | 0.302177 | 3_4:-35346402 | Msa0498560:CDS |
| AACAATAATCATCAAAGATT+AGG | 0.323426 | 3_4:-35345278 | Msa0498560:CDS |
| TTCTTTGCACATTGGATACT+TGG | 0.333622 | 3_4:-35344241 | Msa0498560:CDS |
| ATGGGATTCTTGATGCCTAT+TGG | 0.346223 | 3_4:-35346374 | Msa0498560:CDS |
| GTAATTTCAAATTGAAGTCT+TGG | 0.346934 | 3_4:+35346425 | None:intergenic |
| GGTGTTCTAAATGTATATAT+TGG | 0.364743 | 3_4:-35344199 | Msa0498560:CDS |
| TGGAACTGCAGTAACATTCT+TGG | 0.365502 | 3_4:-35344221 | Msa0498560:CDS |
| TTGAAGGCTGGCACTTGTTA+AGG | 0.371264 | 3_4:-35343998 | Msa0498560:exon |
| CAATTTGAAATTACATTACA+TGG | 0.377562 | 3_4:-35346416 | Msa0498560:CDS |
| TTTCTCCTTTGGGCTTCAAT+GGG | 0.382298 | 3_4:-35346392 | Msa0498560:CDS |
| CCCCATAAAATCGGCTTGTA+AGG | 0.392098 | 3_4:+35344571 | None:intergenic |
| TCAAACTATGGTAAGGCAAT+TGG | 0.421826 | 3_4:+35343966 | None:intergenic |
| GGAACTGCAGTAACATTCTT+GGG | 0.440614 | 3_4:-35344220 | Msa0498560:CDS |
| CTAACACAACCCCATAAAAT+CGG | 0.449701 | 3_4:+35344562 | None:intergenic |
| TTTCTAAGACTAACCTACAT+AGG | 0.452348 | 3_4:-35344527 | Msa0498560:intron |
| TGAAAAGAAGATGGTATTGA+AGG | 0.452602 | 3_4:-35344014 | Msa0498560:CDS |
| CTAATTGCAAGTATACCAAT+AGG | 0.464337 | 3_4:+35346359 | None:intergenic |
| GCTGTACTTCTTGCCACAGC+AGG | 0.466162 | 3_4:-35345338 | Msa0498560:CDS |
| GTGAGGATTGTCTCCACTTG+TGG | 0.498214 | 3_4:+35344593 | None:intergenic |
| TGAGGATTGTCTCCACTTGT+GGG | 0.501260 | 3_4:+35344594 | None:intergenic |
| GATCCAAAAGAAGAAGTGTA+TGG | 0.524463 | 3_4:-35344264 | Msa0498560:CDS |
| ATCTGGCTGCAAGTCCTAGT+TGG | 0.526574 | 3_4:-35345236 | Msa0498560:CDS |
| TTCAACCGACAAACCTATGT+AGG | 0.531982 | 3_4:+35344514 | None:intergenic |
| ATTTGGATCAAACTATGGTA+AGG | 0.535190 | 3_4:+35343959 | None:intergenic |
| AATAAAATTCTAAGCCACCT+TGG | 0.535910 | 3_4:+35346314 | None:intergenic |
| AAGAAGATGGTATTGAAGGC+TGG | 0.539396 | 3_4:-35344010 | Msa0498560:CDS |
| TTTGATGATTATTGTTGAAG+AGG | 0.545214 | 3_4:+35345285 | None:intergenic |
| TCTTCCAAATGAAAAGAAGA+TGG | 0.560372 | 3_4:-35344023 | Msa0498560:CDS |
| GTGTATGGTTCTTTGCACAT+TGG | 0.569730 | 3_4:-35344249 | Msa0498560:CDS |
| GTGTTAAACAGTCCCACAAG+TGG | 0.588909 | 3_4:-35344606 | Msa0498560:intron |
| TAACACATATAGAGTACTAG+TGG | 0.591416 | 3_4:-35343909 | Msa0498560:three_prime_UTR |
| TGACATGATTGCTCCTGCTG+TGG | 0.597152 | 3_4:+35345325 | None:intergenic |
| CAAATAGAGAGGAGAATCCA+AGG | 0.604953 | 3_4:-35346331 | Msa0498560:CDS |
| TAGGTTAGTCTTAGAAATCG+TGG | 0.617434 | 3_4:+35344533 | None:intergenic |
| AATTAGATTATCAAATAGAG+AGG | 0.630071 | 3_4:-35346342 | Msa0498560:CDS |
| AGAATCCCATTGAAGCCCAA+AGG | 0.642048 | 3_4:+35346387 | None:intergenic |
| TAAAATCGGCTTGTAAGGTG+AGG | 0.656789 | 3_4:+35344576 | None:intergenic |
| GTGGTCGAATGATACCAACT+AGG | 0.678006 | 3_4:+35345222 | None:intergenic |
| TTGGTATCATTCGACCACGA+AGG | 0.697962 | 3_4:-35345217 | Msa0498560:intron |
| CAATAATCATCAAAGATTAG+GGG | 0.720596 | 3_4:-35345276 | Msa0498560:CDS |
| ATAGAGAGGAGAATCCAAGG+TGG | 0.833273 | 3_4:-35346328 | Msa0498560:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAATATTTAAATATAAT+TGG | + | chr3_4:35344076-35344095 | None:intergenic | 0.0% |
| !!! | TATTAATTTAACACTTATTT+TGG | + | chr3_4:35344108-35344127 | None:intergenic | 10.0% |
| !!! | TTAAATAATAATCTTTTTGA+TGG | - | chr3_4:35344670-35344689 | Msa0498560:intron | 10.0% |
| !! | AAATATTGATATATCCAAAT+GGG | + | chr3_4:35344439-35344458 | None:intergenic | 15.0% |
| !! | AAAATATTGATATATCCAAA+TGG | + | chr3_4:35344440-35344459 | None:intergenic | 15.0% |
| !! | GAATAAATTAACTAAAAATG+TGG | + | chr3_4:35344553-35344572 | None:intergenic | 15.0% |
| !! | AATTATAATCTTTGTCAAAA+AGG | + | chr3_4:35344621-35344640 | None:intergenic | 15.0% |
| !! | AGATTATAATTTATACTTTG+AGG | - | chr3_4:35344630-35344649 | Msa0498560:intron | 15.0% |
| !!! | AAAACATAATTTTTGTTGTT+AGG | - | chr3_4:35345840-35345859 | Msa0498560:intron | 15.0% |
| !!! | CAATTTGAAATTACATTACA+TGG | - | chr3_4:35343822-35343841 | Msa0498560:three_prime_UTR | 20.0% |
| !! | AATTAGATTATCAAATAGAG+AGG | - | chr3_4:35343896-35343915 | Msa0498560:three_prime_UTR | 20.0% |
| !!! | ACTAAAGTATAAAGTATCTT+AGG | - | chr3_4:35344324-35344343 | Msa0498560:intron | 20.0% |
| !! | TACATAAATAGGTCAATTAA+AGG | + | chr3_4:35344375-35344394 | None:intergenic | 20.0% |
| !! | AATATTGATATATCCAAATG+GGG | + | chr3_4:35344438-35344457 | None:intergenic | 20.0% |
| !! | TTACTAATAAGATCATGTAA+TGG | - | chr3_4:35344586-35344605 | Msa0498560:CDS | 20.0% |
| !! | AACAATAATCATCAAAGATT+AGG | - | chr3_4:35344960-35344979 | Msa0498560:intron | 20.0% |
| !! | ACAATAATCATCAAAGATTA+GGG | - | chr3_4:35344961-35344980 | Msa0498560:intron | 20.0% |
| !! | ATAGCTCACTATATTTATTT+AGG | - | chr3_4:35345473-35345492 | Msa0498560:intron | 20.0% |
| !! | TAAAAATTTGGATCAAACTA+TGG | + | chr3_4:35346287-35346306 | None:intergenic | 20.0% |
| !! | GTATATACCATGTAAAAATT+TGG | + | chr3_4:35346299-35346318 | None:intergenic | 20.0% |
| !!! | TTCCTTTTGTTTTTTTTATC+AGG | - | chr3_4:35346387-35346406 | Msa0498560:CDS | 20.0% |
| !! | TTCCTGATAAAAAAAACAAA+AGG | + | chr3_4:35346392-35346411 | None:intergenic | 20.0% |
| !!! | TTTGTTTTTTTTATCAGGAA+AGG | - | chr3_4:35346392-35346411 | Msa0498560:CDS | 20.0% |
| !! | AGAATATTGCAAGTTAAATT+TGG | - | chr3_4:35346424-35346443 | Msa0498560:CDS | 20.0% |
| ! | GTAATTTCAAATTGAAGTCT+TGG | + | chr3_4:35343816-35343835 | None:intergenic | 25.0% |
| !! | CTATGTTCATACAATTTTTC+AGG | - | chr3_4:35343947-35343966 | Msa0498560:three_prime_UTR | 25.0% |
| !!! | GAATTTATTTTGTATTCTGC+TGG | - | chr3_4:35344026-35344045 | Msa0498560:CDS | 25.0% |
| !! | CACTGCTTTATTACATAAAT+AGG | + | chr3_4:35344386-35344405 | None:intergenic | 25.0% |
| ! | CTATTTATGTAATAAAGCAG+TGG | - | chr3_4:35344384-35344403 | Msa0498560:intron | 25.0% |
| !! | TGATTGGTTAACTTTAATGA+TGG | - | chr3_4:35344490-35344509 | Msa0498560:intron | 25.0% |
| ! | TATTAGTAACTAACAAGCTT+TGG | + | chr3_4:35344575-35344594 | None:intergenic | 25.0% |
| !!! | TCTTTTTGATGGTAATATGA+AGG | - | chr3_4:35344681-35344700 | Msa0498560:intron | 25.0% |
| !! | AATTTTCTTGTTCTCTTAAC+AGG | + | chr3_4:35344735-35344754 | None:intergenic | 25.0% |
| ! | AAGAGAACAAGAAAATTATG+TGG | - | chr3_4:35344738-35344757 | Msa0498560:intron | 25.0% |
| !!! | TTTTGAGTTTCTGTTAAAAC+AGG | - | chr3_4:35344872-35344891 | Msa0498560:intron | 25.0% |
| !! | TTTGATGATTATTGTTGAAG+AGG | + | chr3_4:35344956-35344975 | None:intergenic | 25.0% |
| ! | CAATAATCATCAAAGATTAG+GGG | - | chr3_4:35344962-35344981 | Msa0498560:intron | 25.0% |
| !! | ATTTAAATGTTTTACCTTCG+TGG | + | chr3_4:35345038-35345057 | None:intergenic | 25.0% |
| ! | TCACATAATTCTTGTAATCA+AGG | - | chr3_4:35345207-35345226 | Msa0498560:intron | 25.0% |
| ! | CACATAATTCTTGTAATCAA+GGG | - | chr3_4:35345208-35345227 | Msa0498560:intron | 25.0% |
| !!! | TTTTTGTTGTCTTAAACCTT+CGG | + | chr3_4:35345822-35345841 | None:intergenic | 25.0% |
| ! | GATTTCAATGGTATAAGATT+GGG | + | chr3_4:35345886-35345905 | None:intergenic | 25.0% |
| ! | TGATTTCAATGGTATAAGAT+TGG | + | chr3_4:35345887-35345906 | None:intergenic | 25.0% |
| !! | AGTTTCGAATATCTTTTCAA+TGG | + | chr3_4:35345929-35345948 | None:intergenic | 25.0% |
| !! | ATCTTTATTTACTTGTTCAC+AGG | - | chr3_4:35345950-35345969 | Msa0498560:intron | 25.0% |
| !! | TCTTTATTTACTTGTTCACA+GGG | - | chr3_4:35345951-35345970 | Msa0498560:intron | 25.0% |
| !! | GGTGTTCTAAATGTATATAT+TGG | - | chr3_4:35346039-35346058 | Msa0498560:intron | 25.0% |
| !!! | TCTACCTTTTTCAAGAAAAA+TGG | - | chr3_4:35346148-35346167 | Msa0498560:intron | 25.0% |
| !!! | CTACCTTTTTCAAGAAAAAT+GGG | - | chr3_4:35346149-35346168 | Msa0498560:intron | 25.0% |
| !! | AATACCATCTTCTTTTCATT+TGG | + | chr3_4:35346222-35346241 | None:intergenic | 25.0% |
| !! | GTTTGATCCAAATTTTTACA+TGG | - | chr3_4:35346289-35346308 | Msa0498560:intron | 25.0% |
| CTAATTGCAAGTATACCAAT+AGG | + | chr3_4:35343882-35343901 | None:intergenic | 30.0% | |
| AATAAAATTCTAAGCCACCT+TGG | + | chr3_4:35343927-35343946 | None:intergenic | 30.0% | |
| TATCTTAGGTAGATATTCTG+TGG | - | chr3_4:35344338-35344357 | Msa0498560:intron | 30.0% | |
| AACTTTAATGATGGCATGAA+AGG | - | chr3_4:35344499-35344518 | Msa0498560:intron | 30.0% | |
| TTGAATGTAACCACATATGT+CGG | - | chr3_4:35344783-35344802 | Msa0498560:intron | 30.0% | |
| GTTTCATAGACATAAATGGT+GGG | + | chr3_4:35345148-35345167 | None:intergenic | 30.0% | |
| CTTGGTTTCATAGACATAAA+TGG | + | chr3_4:35345152-35345171 | None:intergenic | 30.0% | |
| GAAACTTGGTAGAAGAAATT+AGG | - | chr3_4:35345430-35345449 | Msa0498560:intron | 30.0% | |
| GTATTATTACTACTACGAAC+CGG | - | chr3_4:35345495-35345514 | Msa0498560:intron | 30.0% | |
| !! | TTTCTAAGACTAACCTACAT+AGG | - | chr3_4:35345711-35345730 | Msa0498560:intron | 30.0% |
| ! | TTATGATATAGTCTGGAGTT+CGG | + | chr3_4:35345783-35345802 | None:intergenic | 30.0% |
| ! | TATCTTTTCAATGGTCTACA+TGG | + | chr3_4:35345920-35345939 | None:intergenic | 30.0% |
| ! | CTTTATTTACTTGTTCACAG+GGG | - | chr3_4:35345952-35345971 | Msa0498560:intron | 30.0% |
| TACCACGAAAAAACATCAAA+AGG | - | chr3_4:35346072-35346091 | Msa0498560:intron | 30.0% | |
| ! | CATCAAAAGGCATAAGAATT+TGG | - | chr3_4:35346085-35346104 | Msa0498560:intron | 30.0% |
| !! | AGACCCATTTTTCTTGAAAA+AGG | + | chr3_4:35346155-35346174 | None:intergenic | 30.0% |
| CTACATACAAAAACAAAGAG+TGG | - | chr3_4:35346173-35346192 | Msa0498560:intron | 30.0% | |
| TCTTCCAAATGAAAAGAAGA+TGG | - | chr3_4:35346215-35346234 | Msa0498560:intron | 30.0% | |
| ! | TGAAAAGAAGATGGTATTGA+AGG | - | chr3_4:35346224-35346243 | Msa0498560:intron | 30.0% |
| ATTTGGATCAAACTATGGTA+AGG | + | chr3_4:35346282-35346301 | None:intergenic | 30.0% | |
| ! | TAACACATATAGAGTACTAG+TGG | - | chr3_4:35346329-35346348 | Msa0498560:CDS | 30.0% |
| ATTACATGGCTTTCTCCTTT+GGG | - | chr3_4:35343836-35343855 | Msa0498560:three_prime_UTR | 35.0% | |
| GATTGTCTTGTCACATAGAT+AGG | + | chr3_4:35344173-35344192 | None:intergenic | 35.0% | |
| ! | TAAAGCAGTGGTGAAAGTTT+TGG | - | chr3_4:35344396-35344415 | Msa0498560:intron | 35.0% |
| AGATCAGTTGTCACATTGAT+TGG | - | chr3_4:35344474-35344493 | Msa0498560:intron | 35.0% | |
| TGAGTTTCTGTTAAAACAGG+TGG | - | chr3_4:35344875-35344894 | Msa0498560:intron | 35.0% | |
| !! | TTGCACTTTATGGTGTTATC+TGG | - | chr3_4:35344985-35345004 | Msa0498560:intron | 35.0% |
| GTGAGCATTTCTCAACAAAA+GGG | + | chr3_4:35345062-35345081 | None:intergenic | 35.0% | |
| AGTGAGCATTTCTCAACAAA+AGG | + | chr3_4:35345063-35345082 | None:intergenic | 35.0% | |
| ! | TGCTATCAGGTTTTCGTTAT+CGG | - | chr3_4:35345118-35345137 | Msa0498560:intron | 35.0% |
| GGTTTCATAGACATAAATGG+TGG | + | chr3_4:35345149-35345168 | None:intergenic | 35.0% | |
| !!! | CCTTTTTTCAACCAAATCAG+CGG | + | chr3_4:35345327-35345346 | None:intergenic | 35.0% |
| AAATGAATCACCATGAGTTG+AGG | - | chr3_4:35345369-35345388 | Msa0498560:intron | 35.0% | |
| AGAAGAACATGAACAAAGAG+TGG | - | chr3_4:35345400-35345419 | Msa0498560:intron | 35.0% | |
| AGAAGAATTCGGTACGTATA+GGG | + | chr3_4:35345541-35345560 | None:intergenic | 35.0% | |
| AACCGCGAATTATGTGATTA+TGG | - | chr3_4:35345606-35345625 | Msa0498560:intron | 35.0% | |
| GACCATAATCACATAATTCG+CGG | + | chr3_4:35345611-35345630 | None:intergenic | 35.0% | |
| !! | ACCTTACAAGCCGATTTTAT+GGG | - | chr3_4:35345666-35345685 | Msa0498560:intron | 35.0% |
| CTAACACAACCCCATAAAAT+CGG | + | chr3_4:35345679-35345698 | None:intergenic | 35.0% | |
| !! | TAGGTTAGTCTTAGAAATCG+TGG | + | chr3_4:35345708-35345727 | None:intergenic | 35.0% |
| ACTAACCTACATAGGTTTGT+CGG | - | chr3_4:35345719-35345738 | Msa0498560:intron | 35.0% | |
| GAAGGGATTATGATATAGTC+TGG | + | chr3_4:35345790-35345809 | None:intergenic | 35.0% | |
| TGGTATAAGATTGGGATTTC+AGG | + | chr3_4:35345878-35345897 | None:intergenic | 35.0% | |
| ! | GATCCAAAAGAAGAAGTGTA+TGG | - | chr3_4:35345974-35345993 | Msa0498560:intron | 35.0% |
| ! | GAACCATACACTTCTTCTTT+TGG | + | chr3_4:35345980-35345999 | None:intergenic | 35.0% |
| TTCTTTGCACATTGGATACT+TGG | - | chr3_4:35345997-35346016 | Msa0498560:intron | 35.0% | |
| !!! | TGCCTTTTGATGTTTTTTCG+TGG | + | chr3_4:35346077-35346096 | None:intergenic | 35.0% |
| TCAAACTATGGTAAGGCAAT+TGG | + | chr3_4:35346275-35346294 | None:intergenic | 35.0% | |
| CATTACATGGCTTTCTCCTT+TGG | - | chr3_4:35343835-35343854 | Msa0498560:three_prime_UTR | 40.0% | |
| TTTCTCCTTTGGGCTTCAAT+GGG | - | chr3_4:35343846-35343865 | Msa0498560:three_prime_UTR | 40.0% | |
| ATGGGATTCTTGATGCCTAT+TGG | - | chr3_4:35343864-35343883 | Msa0498560:three_prime_UTR | 40.0% | |
| CAAATAGAGAGGAGAATCCA+AGG | - | chr3_4:35343907-35343926 | Msa0498560:three_prime_UTR | 40.0% | |
| !! | GTGGTGAAAGTTTTGGTAGA+TGG | - | chr3_4:35344403-35344422 | Msa0498560:intron | 40.0% |
| !! | GTTTTGGTAGATGGTTGCTT+TGG | - | chr3_4:35344412-35344431 | Msa0498560:intron | 40.0% |
| AGATTAGGGGTTGCACTTTA+TGG | - | chr3_4:35344975-35344994 | Msa0498560:intron | 40.0% | |
| GATAACGAAAACCTGATAGC+AGG | + | chr3_4:35345119-35345138 | None:intergenic | 40.0% | |
| ! | TCATAGACATAAATGGTGGG+TGG | + | chr3_4:35345145-35345164 | None:intergenic | 40.0% |
| ACGACTAGCACTATTGAACT+TGG | + | chr3_4:35345170-35345189 | None:intergenic | 40.0% | |
| ATCAAGGGAGAATTGCGAAT+TGG | - | chr3_4:35345223-35345242 | Msa0498560:CDS | 40.0% | |
| !! | CCGCTGATTTGGTTGAAAAA+AGG | - | chr3_4:35345324-35345343 | Msa0498560:CDS | 40.0% |
| GAAGAATTCGGTACGTATAG+GGG | + | chr3_4:35345540-35345559 | None:intergenic | 40.0% | |
| GAGAAGAATTCGGTACGTAT+AGG | + | chr3_4:35345542-35345561 | None:intergenic | 40.0% | |
| !! | TAAAATCGGCTTGTAAGGTG+AGG | + | chr3_4:35345665-35345684 | None:intergenic | 40.0% |
| !! | CACCTTACAAGCCGATTTTA+TGG | - | chr3_4:35345665-35345684 | Msa0498560:intron | 40.0% |
| !! | CCTTACAAGCCGATTTTATG+GGG | - | chr3_4:35345667-35345686 | Msa0498560:intron | 40.0% |
| TTCAACCGACAAACCTATGT+AGG | + | chr3_4:35345727-35345746 | None:intergenic | 40.0% | |
| TCGGACGATAGGTAAGTAAA+GGG | + | chr3_4:35345764-35345783 | None:intergenic | 40.0% | |
| TTCGGACGATAGGTAAGTAA+AGG | + | chr3_4:35345765-35345784 | None:intergenic | 40.0% | |
| GCAAGAAAGGGTGATTTCAA+TGG | + | chr3_4:35345898-35345917 | None:intergenic | 40.0% | |
| ATGGTCTACATGGCAAGAAA+GGG | + | chr3_4:35345910-35345929 | None:intergenic | 40.0% | |
| AATGGTCTACATGGCAAGAA+AGG | + | chr3_4:35345911-35345930 | None:intergenic | 40.0% | |
| GTGTATGGTTCTTTGCACAT+TGG | - | chr3_4:35345989-35346008 | Msa0498560:intron | 40.0% | |
| TGGAACTGCAGTAACATTCT+TGG | - | chr3_4:35346017-35346036 | Msa0498560:intron | 40.0% | |
| GGAACTGCAGTAACATTCTT+GGG | - | chr3_4:35346018-35346037 | Msa0498560:intron | 40.0% | |
| ! | AAGAAGATGGTATTGAAGGC+TGG | - | chr3_4:35346228-35346247 | Msa0498560:intron | 40.0% |
| CTTTCTCCTTTGGGCTTCAA+TGG | - | chr3_4:35343845-35343864 | Msa0498560:three_prime_UTR | 45.0% | |
| AGAATCCCATTGAAGCCCAA+AGG | + | chr3_4:35343854-35343873 | None:intergenic | 45.0% | |
| ATAGAGAGGAGAATCCAAGG+TGG | - | chr3_4:35343910-35343929 | Msa0498560:three_prime_UTR | 45.0% | |
| TGACACGATACCGACATATG+TGG | + | chr3_4:35344796-35344815 | None:intergenic | 45.0% | |
| GTGGTCGAATGATACCAACT+AGG | + | chr3_4:35345019-35345038 | None:intergenic | 45.0% | |
| TTGGTATCATTCGACCACGA+AGG | - | chr3_4:35345021-35345040 | Msa0498560:intron | 45.0% | |
| TCATTCGATCACCTGCTATC+AGG | - | chr3_4:35345105-35345124 | Msa0498560:intron | 45.0% | |
| !! | TGGTACGTGAGTACCGAATT+CGG | - | chr3_4:35345243-35345262 | Msa0498560:CDS | 45.0% |
| ! | AGTACCGAATTCGGGTACTT+CGG | - | chr3_4:35345252-35345271 | Msa0498560:CDS | 45.0% |
| TAACCATGCTTTGGTACGCT+TGG | + | chr3_4:35345304-35345323 | None:intergenic | 45.0% | |
| AATCAGCGGTAACCATGCTT+TGG | + | chr3_4:35345313-35345332 | None:intergenic | 45.0% | |
| ! | AAGCATGGTTACCGCTGATT+TGG | - | chr3_4:35345313-35345332 | Msa0498560:CDS | 45.0% |
| AGAGTGGAGAGTGAGAAACT+TGG | - | chr3_4:35345416-35345435 | Msa0498560:intron | 45.0% | |
| ! | CGTATAGGGGTATACAGCTT+CGG | + | chr3_4:35345527-35345546 | None:intergenic | 45.0% |
| TACGCGACAGGAGAAGAATT+CGG | + | chr3_4:35345552-35345571 | None:intergenic | 45.0% | |
| ACATAATTCGCGGTTCGTTC+CGG | + | chr3_4:35345601-35345620 | None:intergenic | 45.0% | |
| GTGTTAAACAGTCCCACAAG+TGG | - | chr3_4:35345632-35345651 | Msa0498560:intron | 45.0% | |
| TGAGGATTGTCTCCACTTGT+GGG | + | chr3_4:35345647-35345666 | None:intergenic | 45.0% | |
| !! | CCCCATAAAATCGGCTTGTA+AGG | + | chr3_4:35345670-35345689 | None:intergenic | 45.0% |
| CTTAAACCTTCGGTTCTCAG+AGG | + | chr3_4:35345812-35345831 | None:intergenic | 45.0% | |
| ! | TTGAAGGCTGGCACTTGTTA+AGG | - | chr3_4:35346240-35346259 | Msa0498560:intron | 45.0% |
| ! | ATGGTTGCTTTGGCCCCATT+TGG | - | chr3_4:35344422-35344441 | Msa0498560:intron | 50.0% |
| TGACATGATTGCTCCTGCTG+TGG | + | chr3_4:35344916-35344935 | None:intergenic | 50.0% | |
| ATCTGGCTGCAAGTCCTAGT+TGG | - | chr3_4:35345002-35345021 | Msa0498560:intron | 50.0% | |
| !! | GGTACGTGAGTACCGAATTC+GGG | - | chr3_4:35345244-35345263 | Msa0498560:CDS | 50.0% |
| ! | TACGCCGAAGTACCCGAATT+CGG | + | chr3_4:35345259-35345278 | None:intergenic | 50.0% |
| ATTCGGGTACTTCGGCGTAT+TGG | - | chr3_4:35345260-35345279 | Msa0498560:CDS | 50.0% | |
| GAACCAAGCGTACCAAAGCA+TGG | - | chr3_4:35345298-35345317 | Msa0498560:CDS | 50.0% | |
| CTCACTCAGTCCTCAACTCA+TGG | + | chr3_4:35345382-35345401 | None:intergenic | 50.0% | |
| TATACAGCTTCGGTACGCTC+CGG | + | chr3_4:35345517-35345536 | None:intergenic | 50.0% | |
| GTGAGGATTGTCTCCACTTG+TGG | + | chr3_4:35345648-35345667 | None:intergenic | 50.0% | |
| ! | TAGTCTGGAGTTCGGACGAT+AGG | + | chr3_4:35345775-35345794 | None:intergenic | 50.0% |
| ACCTTCGGTTCTCAGAGGAA+GGG | + | chr3_4:35345807-35345826 | None:intergenic | 50.0% | |
| AACCTTCGGTTCTCAGAGGA+AGG | + | chr3_4:35345808-35345827 | None:intergenic | 50.0% | |
| GCTGTACTTCTTGCCACAGC+AGG | - | chr3_4:35344900-35344919 | Msa0498560:intron | 55.0% | |
| ! | CTTTGGTACGCTTGGTTCGC+TGG | + | chr3_4:35345296-35345315 | None:intergenic | 55.0% |
| ! | TCCCTTCCTCTGAGAACCGA+AGG | - | chr3_4:35345803-35345822 | Msa0498560:intron | 55.0% |
| TTCGTTCCGGTACGCGGTAC+GGG | + | chr3_4:35345588-35345607 | None:intergenic | 60.0% | |
| GTTCGTTCCGGTACGCGGTA+CGG | + | chr3_4:35345589-35345608 | None:intergenic | 60.0% | |
| TCCGGTACGCGGTACGGGTA+CGG | + | chr3_4:35345583-35345602 | None:intergenic | 65.0% | |
| TCGCGGTTCGTTCCGGTACG+CGG | + | chr3_4:35345594-35345613 | None:intergenic | 65.0% | |
| ACGGGTTCGCGGTACGCGAC+AGG | + | chr3_4:35345564-35345583 | None:intergenic | 70.0% | |
| GCGGTACGGGTACGGGTTCG+CGG | + | chr3_4:35345575-35345594 | None:intergenic | 70.0% | |
| CCGGTACGCGGTACGGGTAC+GGG | + | chr3_4:35345582-35345601 | None:intergenic | 70.0% | |
| CCCGTACCCGTACCGCGTAC+CGG | - | chr3_4:35345579-35345598 | Msa0498560:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 35343807 | 35346453 | 35343807 | ID=Msa0498560;Name=Msa0498560 |
| chr3_4 | mRNA | 35343807 | 35346453 | 35343807 | ID=Msa0498560-mRNA-1;Parent=Msa0498560;Name=Msa0498560-mRNA-1;_AED=0.37;_eAED=0.37;_QI=0|0|0.25|0.75|1|1|4|193|229 |
| chr3_4 | exon | 35343807 | 35344288 | 35343807 | ID=Msa0498560-mRNA-1:exon:7392;Parent=Msa0498560-mRNA-1 |
| chr3_4 | exon | 35344528 | 35344617 | 35344528 | ID=Msa0498560-mRNA-1:exon:7391;Parent=Msa0498560-mRNA-1 |
| chr3_4 | exon | 35345218 | 35345366 | 35345218 | ID=Msa0498560-mRNA-1:exon:7390;Parent=Msa0498560-mRNA-1 |
| chr3_4 | exon | 35346292 | 35346453 | 35346292 | ID=Msa0498560-mRNA-1:exon:7389;Parent=Msa0498560-mRNA-1 |
| chr3_4 | CDS | 35346292 | 35346453 | 35346292 | ID=Msa0498560-mRNA-1:cds;Parent=Msa0498560-mRNA-1 |
| chr3_4 | CDS | 35345218 | 35345366 | 35345218 | ID=Msa0498560-mRNA-1:cds;Parent=Msa0498560-mRNA-1 |
| chr3_4 | CDS | 35344528 | 35344617 | 35344528 | ID=Msa0498560-mRNA-1:cds;Parent=Msa0498560-mRNA-1 |
| chr3_4 | CDS | 35344000 | 35344288 | 35344000 | ID=Msa0498560-mRNA-1:cds;Parent=Msa0498560-mRNA-1 |
| chr3_4 | three_prime_UTR | 35343807 | 35343999 | 35343807 | ID=Msa0498560-mRNA-1:three_prime_utr;Parent=Msa0498560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
