AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0502330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0502330 MtrunA17_Chr3g0100651 95.303 511 22 1 1 511 1 509 0.0 1011
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0502330 AT5G55500.1 59.665 538 178 7 3 511 7 534 0.0 631

Find 155 sgRNAs with CRISPR-Local

Find 468 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAACATGGTGTAAGTTTAA+AGG 0.195735 3_4:-44434247 None:intergenic
CGGTCATGTGAGGGTTATTT+TGG 0.203278 3_4:+44429124 Msa0502330:CDS
TATGAGACTGCTCTCTTTAA+AGG 0.207320 3_4:+44434103 Msa0502330:CDS
CCTTACCTCTATTGTTCTAT+TGG 0.224223 3_4:+44435148 Msa0502330:three_prime_UTR
TATGTTTCTTCTAGAGTTAC+TGG 0.242168 3_4:+44432053 Msa0502330:CDS
GGCAAAGGGTGGTGAGAGTT+TGG 0.255182 3_4:+44429294 Msa0502330:CDS
CTGAGTTTGGAGAAATGATT+AGG 0.268950 3_4:+44434209 Msa0502330:CDS
GCTCAGTAACCAAACCAATT+TGG 0.281119 3_4:-44434809 None:intergenic
ACTGCACGTATTTCTGAGTT+TGG 0.286664 3_4:+44434196 Msa0502330:CDS
GAAGAGGAGGAGGGTGGTTT+AGG 0.290366 3_4:+44429194 Msa0502330:CDS
TCATGCTATTCTCTCACCTT+TGG 0.294049 3_4:+44434078 Msa0502330:CDS
CCTCATTTGATCTTTGTAGA+TGG 0.301530 3_4:+44432089 Msa0502330:CDS
AATTTGGCTATAGTTATAAA+AGG 0.306861 3_4:-44434793 None:intergenic
AGCGCATTGATCACAGTTTC+AGG 0.313909 3_4:-44434670 None:intergenic
GAGAGTTTGGGTGATGTTAT+TGG 0.333268 3_4:+44429307 Msa0502330:CDS
TGTTTGAATCCTTGAACAAT+TGG 0.347645 3_4:+44434380 Msa0502330:CDS
AGGTGGGAGGGTGAGGATGG+TGG 0.348275 3_4:+44429255 Msa0502330:CDS
CATGCTATTCTCTCACCTTT+GGG 0.353415 3_4:+44434079 Msa0502330:CDS
TGGTTTGGTTACTGAGCTAA+TGG 0.355761 3_4:+44434815 Msa0502330:three_prime_UTR
AGATTATTAGCAGCCAGTTC+AGG 0.373793 3_4:+44434569 Msa0502330:CDS
TGAAGATGAAAAGGAATAGT+AGG 0.379305 3_4:-44428895 None:intergenic
CATACTATGCGTGATTTGAT+TGG 0.386334 3_4:+44429469 Msa0502330:CDS
GGTGAATATGAAGGTAGAAT+TGG 0.389528 3_4:-44429070 None:intergenic
TAACTATAGCCAAATTGGTT+TGG 0.394794 3_4:+44434800 Msa0502330:three_prime_UTR
GAAATGATTAGGGCATCATT+TGG 0.397696 3_4:+44434220 Msa0502330:CDS
ATAGGACTACATTGTACAAT+AGG 0.398051 3_4:+44435120 Msa0502330:three_prime_UTR
GGGAAGATGGTTGTTGATGA+GGG 0.401488 3_4:+44429406 Msa0502330:CDS
GGGTGAGGATGGTGGTGGAG+AGG 0.401838 3_4:+44429263 Msa0502330:CDS
AGGAGTTCAGTTTGTGAAGG+TGG 0.404692 3_4:+44429238 Msa0502330:CDS
CAAAATGTGGACGCCTGAAC+TGG 0.415856 3_4:-44434582 None:intergenic
TTTGAGGTTGATGGTGGTGT+AGG 0.416547 3_4:+44429373 Msa0502330:CDS
TGAGTTTGGAGAAATGATTA+GGG 0.417162 3_4:+44434210 Msa0502330:CDS
AGAAGGAGTTGAAGATGAAA+AGG 0.418362 3_4:-44428904 None:intergenic
TGAAGGTGGGAGGGTGAGGA+TGG 0.418456 3_4:+44429252 Msa0502330:CDS
TGGGAGGGTGAGGATGGTGG+TGG 0.427137 3_4:+44429258 Msa0502330:CDS
AAGATCAAATGAGGTCGATT+AGG 0.427580 3_4:-44432080 None:intergenic
GGAGTTCAGTTTGTGAAGGT+GGG 0.429232 3_4:+44429239 Msa0502330:CDS
TCAGGATTTGGTGATGGTGT+AGG 0.429593 3_4:-44428968 None:intergenic
CCTTTAAACTTACACCATGT+TGG 0.433548 3_4:+44434247 Msa0502330:CDS
GAAAGAATTTAATTGTGATA+AGG 0.435133 3_4:+44429513 Msa0502330:CDS
ATTGCAGAGTTCAGTGAAAA+GGG 0.439522 3_4:+44434917 Msa0502330:three_prime_UTR
ATGGTGGTGTAGGGTTTGAA+AGG 0.442819 3_4:+44429383 Msa0502330:CDS
TTTGTGAAGGTGGGAGGGTG+AGG 0.443601 3_4:+44429248 Msa0502330:CDS
GCAAAGGGTGGTGAGAGTTT+GGG 0.447847 3_4:+44429295 Msa0502330:CDS
ATTAGACGCCCAATTGTTCA+AGG 0.450169 3_4:-44434389 None:intergenic
CGCGGCGATGGAAGAGGAGG+AGG 0.450967 3_4:+44429184 Msa0502330:CDS
GTTTGAATCCTTGAACAATT+GGG 0.451278 3_4:+44434381 Msa0502330:CDS
AATTGCAGAGTTCAGTGAAA+AGG 0.454038 3_4:+44434916 Msa0502330:three_prime_UTR
ATCATTGGTGCACATGGTGC+TGG 0.454404 3_4:+44434502 Msa0502330:CDS
TGGAATTGCTGATAACTTGT+TGG 0.454803 3_4:+44434835 Msa0502330:three_prime_UTR
GAGGAGGGTGGTTTAGGTGT+TGG 0.455044 3_4:+44429200 Msa0502330:CDS
CAGGATTTGGTGATGGTGTA+GGG 0.455841 3_4:-44428967 None:intergenic
GATTGAGGAACCAACACTTC+TGG 0.470363 3_4:+44431974 Msa0502330:CDS
TTGAGGTTGATGGTGGTGTA+GGG 0.470897 3_4:+44429374 Msa0502330:CDS
TCGAGCCGCGGCGATGGAAG+AGG 0.474570 3_4:+44429178 Msa0502330:CDS
TCTATAAAGGGTCGTCGAAA+AGG 0.476275 3_4:-44429016 None:intergenic
TCTAGACTAGATACTGTGTT+TGG 0.476293 3_4:-44428818 None:intergenic
ATGAGACTGCTCTCTTTAAA+GGG 0.481297 3_4:+44434104 Msa0502330:CDS
CTTTGTAGATGGACACTGTA+AGG 0.481763 3_4:+44432100 Msa0502330:CDS
ACATTATGTCCTCCAGAGAC+TGG 0.484751 3_4:-44434274 None:intergenic
CGTACATTGCACGATGGAAA+GGG 0.486396 3_4:+44434605 Msa0502330:CDS
TACTATGTTATTGAGAATTG+AGG 0.492670 3_4:+44435188 Msa0502330:three_prime_UTR
AATCTTCACGACGAACAAAC+AGG 0.493940 3_4:-44434297 None:intergenic
GTTCAGTTTGTGAAGGTGGG+AGG 0.494185 3_4:+44429242 Msa0502330:CDS
GGGGAAGATGGTTGTTGATG+AGG 0.494741 3_4:+44429405 Msa0502330:CDS
ATTGGTAAGATGAAGGTTGT+TGG 0.495939 3_4:+44429487 Msa0502330:CDS
ATTGATCACAGTTTCAGGAT+TGG 0.500211 3_4:-44434665 None:intergenic
ACACATGTCTATGAAGGAAC+AGG 0.501258 3_4:+44434453 Msa0502330:CDS
TTTCTATTCGCAGTGGATTG+AGG 0.501849 3_4:+44431959 Msa0502330:intron
TTCAGTTTGTGAAGGTGGGA+GGG 0.509183 3_4:+44429243 Msa0502330:CDS
GCGTACATTGCACGATGGAA+AGG 0.510537 3_4:+44434604 Msa0502330:CDS
CATGTTGGAAAACCAGTCTC+TGG 0.512004 3_4:+44434262 Msa0502330:CDS
CAAGATGCATCTGTGATCAT+TGG 0.514771 3_4:+44434487 Msa0502330:CDS
ATCATGCAATTAACCTTGAC+GGG 0.518602 3_4:+44434635 Msa0502330:CDS
GTGGTGTAGGGTTTGAAAGG+GGG 0.521360 3_4:+44429386 Msa0502330:CDS
CGTAGTGGAGTTGAATTTGA+AGG 0.526047 3_4:-44429103 None:intergenic
TGAGGAGTTGCCTTTGTTTG+AGG 0.526441 3_4:+44429342 Msa0502330:CDS
TGGTGGTGTAGGGTTTGAAA+GGG 0.526549 3_4:+44429384 Msa0502330:CDS
CCAATAGAACAATAGAGGTA+AGG 0.526759 3_4:-44435148 None:intergenic
TCATTCCAATAGAACAATAG+AGG 0.528038 3_4:-44435153 None:intergenic
TGGTAATGGATTCACGCGCT+TGG 0.528742 3_4:+44429144 Msa0502330:CDS
TATCATGCAATTAACCTTGA+CGG 0.531573 3_4:+44434634 Msa0502330:CDS
GGAAGATGGTTGTTGATGAG+GGG 0.534562 3_4:+44429407 Msa0502330:CDS
TGATTTGATTGGTAAGATGA+AGG 0.539678 3_4:+44429480 Msa0502330:CDS
TGGATAGGTATGTTCCTAGA+GGG 0.542170 3_4:+44429434 Msa0502330:CDS
GAGTTGCCTTTGTTTGAGGA+TGG 0.543079 3_4:+44429346 Msa0502330:CDS
GGTGTAGGGTTGAGAAAAGA+AGG 0.544632 3_4:-44428953 None:intergenic
GTCTATGAAGGAACAGGTAC+GGG 0.547167 3_4:+44434459 Msa0502330:CDS
ACAGATGCACGACTCGATGC+AGG 0.550942 3_4:-44435222 None:intergenic
GCTTTCCATGTCTCTTCAAG+TGG 0.551230 3_4:-44434001 None:intergenic
AAATTGATTATTCATCACAT+AGG 0.552200 3_4:+44435102 Msa0502330:three_prime_UTR
CGTGCAATGTACGCAAAATG+TGG 0.553471 3_4:-44434595 None:intergenic
AGCCGCGGCGATGGAAGAGG+AGG 0.556317 3_4:+44429181 Msa0502330:CDS
TGCTCTCTTTAAAGGGCTAA+CGG 0.556353 3_4:+44434111 Msa0502330:CDS
AAGCGTGTCACCAGAAGTGT+TGG 0.559314 3_4:-44431984 None:intergenic
CCCTATGTTGTATACAGATG+AGG 0.560136 3_4:+44435057 Msa0502330:three_prime_UTR
CCCTCATCTGTATACAACAT+AGG 0.561482 3_4:-44435058 None:intergenic
GGTGGTGTAGGGTTTGAAAG+GGG 0.562577 3_4:+44429385 Msa0502330:CDS
AGGCTCCACTTGAAGAGACA+TGG 0.565654 3_4:+44433996 Msa0502330:intron
TGTAAAATCAACCTTGTCAA+CGG 0.566032 3_4:+44434421 Msa0502330:CDS
CCTGAGGTGTTGATAGTACC+TGG 0.568933 3_4:+44434981 Msa0502330:three_prime_UTR
GTTCGCACACATGTCTATGA+AGG 0.570162 3_4:+44434447 Msa0502330:CDS
GTTGGTATAGTGAGACATTG+AGG 0.570310 3_4:+44429218 Msa0502330:CDS
ATGACGAAAACATACTGTTC+CGG 0.573877 3_4:-44434059 None:intergenic
CCTCATCTGTATACAACATA+GGG 0.574738 3_4:-44435057 None:intergenic
CCTATGTTGTATACAGATGA+GGG 0.575785 3_4:+44435058 Msa0502330:three_prime_UTR
TGTCTCATAATCTCCCCTCT+AGG 0.575999 3_4:-44429448 None:intergenic
GAGCTTCTGCACAAGAATTG+TGG 0.576797 3_4:+44434152 Msa0502330:CDS
TTGATGTCAGGATTTGGTGA+TGG 0.577465 3_4:-44428974 None:intergenic
TCTGTGATCATTGGTGCACA+TGG 0.577485 3_4:+44434496 Msa0502330:CDS
TGTCTATGAAGGAACAGGTA+CGG 0.577933 3_4:+44434458 Msa0502330:CDS
TAGGGTCAAGGATCAAATGA+AGG 0.578193 3_4:-44435039 None:intergenic
TTGAGGAGTTCAGTTTGTGA+AGG 0.578440 3_4:+44429235 Msa0502330:CDS
GAAGTAAAGACAGAGAGAGA+AGG 0.581161 3_4:-44428921 None:intergenic
CCAGGTACTATCAACACCTC+AGG 0.581822 3_4:-44434981 None:intergenic
AACTCCACTACGGTCATGTG+AGG 0.582280 3_4:+44429114 Msa0502330:CDS
GAGAGAAGCTATGAACAAGA+AGG 0.584165 3_4:+44428865 Msa0502330:exon
TATTTCACACTGTTACAGAC+TGG 0.585008 3_4:+44432021 Msa0502330:CDS
GTAAGATGAAGGTTGTTGGA+AGG 0.585280 3_4:+44429491 Msa0502330:CDS
TGAAACTGTGATCAATGCGC+TGG 0.590693 3_4:+44434672 Msa0502330:CDS
AAAGCACCATCCTCAAACAA+AGG 0.591101 3_4:-44429352 None:intergenic
TTCAAAACAGTCAACATCGA+AGG 0.593111 3_4:-44434711 None:intergenic
GCGGCGATGGAAGAGGAGGA+GGG 0.593250 3_4:+44429185 Msa0502330:CDS
TATTGGAAGAAGTGAAGATG+AGG 0.597411 3_4:+44429324 Msa0502330:CDS
ATTGGGCGTCTAATTACAAA+GGG 0.597941 3_4:+44434398 Msa0502330:CDS
CTGTATACAACATAGGGTCA+AGG 0.601987 3_4:-44435051 None:intergenic
AATTGGGCGTCTAATTACAA+AGG 0.606833 3_4:+44434397 Msa0502330:CDS
TATGAAGGTAGAATTGGCCA+TGG 0.606974 3_4:-44429064 None:intergenic
CCATCTACAAAGATCAAATG+AGG 0.608402 3_4:-44432089 None:intergenic
CATTGCACGATGGAAAGGGT+TGG 0.612182 3_4:+44434609 Msa0502330:CDS
AAACCCATATCTTAAAACCA+TGG 0.613317 3_4:+44429047 Msa0502330:CDS
GATTGGCATACGACCCGTCA+AGG 0.614488 3_4:-44434648 None:intergenic
GAATTTGAAGGTTGTGACCA+TGG 0.616455 3_4:-44429091 None:intergenic
TTGGATAGGTATGTTCCTAG+AGG 0.621449 3_4:+44429433 Msa0502330:CDS
GGATAGGTATGTTCCTAGAG+GGG 0.624351 3_4:+44429435 Msa0502330:CDS
TGTGACCATGGTGAATATGA+AGG 0.631622 3_4:-44429079 None:intergenic
AACATGCTACATACTGCACC+AGG 0.639702 3_4:-44434999 None:intergenic
TTGCAGAGTTCAGTGAAAAG+GGG 0.641151 3_4:+44434918 Msa0502330:three_prime_UTR
CTTCAAATTCAACTCCACTA+CGG 0.643163 3_4:+44429104 Msa0502330:CDS
GTGTAGGGTTGAGAAAAGAA+GGG 0.643374 3_4:-44428952 None:intergenic
TATTTAGCTCATCCACGTCA+CGG 0.643939 3_4:+44434319 Msa0502330:CDS
TAGGGTTGAGAAAAGAAGGG+TGG 0.644635 3_4:-44428949 None:intergenic
TAACCCTCACATGACCGTAG+TGG 0.652330 3_4:-44429118 None:intergenic
GTTGGAAAACCAGTCTCTGG+AGG 0.653595 3_4:+44434265 Msa0502330:CDS
GCGATGGAAGAGGAGGAGGG+TGG 0.660932 3_4:+44429188 Msa0502330:CDS
TTCTACCTTCATATTCACCA+TGG 0.662894 3_4:+44429074 Msa0502330:CDS
TTTATGTAGCATAGTACCTG+AGG 0.669664 3_4:+44434965 Msa0502330:three_prime_UTR
ACTCCACTACGGTCATGTGA+GGG 0.678563 3_4:+44429115 Msa0502330:CDS
GTGCGAACAATCCGTTGACA+AGG 0.692298 3_4:-44434432 None:intergenic
AGAGCAGTCTCATATCCCAA+AGG 0.695123 3_4:-44434094 None:intergenic
CTCCTCCTCTTCCATCGCCG+CGG 0.711511 3_4:-44429183 None:intergenic
TAGTTATAAAAGGTTAAACA+CGG 0.715195 3_4:-44434783 None:intergenic
CTATGTTGTATACAGATGAG+GGG 0.717407 3_4:+44435059 Msa0502330:three_prime_UTR
TGAATCAAGACTAAGTAACG+AGG 0.736004 3_4:+44434351 Msa0502330:CDS
TTAGCTCATCCACGTCACGG+TGG 0.740259 3_4:+44434322 Msa0502330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAATAAAAACCATAAA+TGG - chr3_4:44430166-44430185 None:intergenic 10.0%
!!! TTTTATTTTATTTTGGATTT+TGG + chr3_4:44430179-44430198 Msa0502330:intron 10.0%
!! AAAAAAAAACAAAAAGATAA+AGG - chr3_4:44431125-44431144 None:intergenic 10.0%
!!! TTTAACATAATTTTATGTTT+TGG - chr3_4:44431799-44431818 None:intergenic 10.0%
!! AAAACATAAAATTATGTTAA+AGG + chr3_4:44431798-44431817 Msa0502330:intron 10.0%
!! TATTACATTATATTATATCA+AGG - chr3_4:44431883-44431902 None:intergenic 10.0%
!! TGACAAAAAATAATTTAAAA+AGG - chr3_4:44432266-44432285 None:intergenic 10.0%
!! ATTTACAAAACAAAAATATT+GGG - chr3_4:44435086-44435105 None:intergenic 10.0%
!! AATTTACAAAACAAAAATAT+TGG - chr3_4:44435087-44435106 None:intergenic 10.0%
!! AGTTAATGAATTAAATTCAT+TGG + chr3_4:44430059-44430078 Msa0502330:intron 15.0%
!!! AATAGGATATTTGTTATTTA+TGG + chr3_4:44430565-44430584 Msa0502330:intron 15.0%
!!! TTTTGTTTAATTTTTGAATC+AGG + chr3_4:44430589-44430608 Msa0502330:intron 15.0%
!!! TTTGTTTAATTTTTGAATCA+GGG + chr3_4:44430590-44430609 Msa0502330:intron 15.0%
!!! TAATTTTGATTATTCTGAAA+TGG + chr3_4:44430714-44430733 Msa0502330:intron 15.0%
!!! ACTTTAATTTAAGCATAATA+TGG + chr3_4:44431285-44431304 Msa0502330:intron 15.0%
!!! CTTTAATTTAAGCATAATAT+GGG + chr3_4:44431286-44431305 Msa0502330:intron 15.0%
!!! AGTTTTGTTTTCAATATATT+TGG - chr3_4:44432308-44432327 None:intergenic 15.0%
!! AATTAGTATAATGACTTATT+TGG - chr3_4:44432681-44432700 None:intergenic 15.0%
!! CATTATTAGAAAGAAAAAAA+AGG - chr3_4:44433232-44433251 None:intergenic 15.0%
!! GAAAGAATTTAATTGTGATA+AGG + chr3_4:44429513-44429532 Msa0502330:CDS 20.0%
!! AATTTAATTGTGATAAGGTA+AGG + chr3_4:44429518-44429537 Msa0502330:intron 20.0%
!!! TTGAGATTAATTTTCATACA+CGG + chr3_4:44429620-44429639 Msa0502330:intron 20.0%
!!! CAGATTGTTTTTAAATTCAT+TGG + chr3_4:44429719-44429738 Msa0502330:intron 20.0%
!!! TGTTGTTAAGTTTAGAATTT+TGG + chr3_4:44429765-44429784 Msa0502330:intron 20.0%
!! TTGTTTGTGATGAAATATTA+AGG + chr3_4:44429791-44429810 Msa0502330:intron 20.0%
!!! AAGTTTTTGACTTTAATTGT+TGG + chr3_4:44429881-44429900 Msa0502330:intron 20.0%
!!! AGTTTTTGACTTTAATTGTT+GGG + chr3_4:44429882-44429901 Msa0502330:intron 20.0%
!!! ATTAGGAGTTTAATTTTCAT+AGG + chr3_4:44429921-44429940 Msa0502330:intron 20.0%
!! AGTCTAATTGTTTATATGAT+CGG + chr3_4:44430407-44430426 Msa0502330:intron 20.0%
!!! AAATTAGTTTCTCTTTTAAG+AGG + chr3_4:44430760-44430779 Msa0502330:intron 20.0%
!! TTTAACTGAAACACAAAAAA+AGG + chr3_4:44431520-44431539 Msa0502330:intron 20.0%
!! TTAACTGAAACACAAAAAAA+GGG + chr3_4:44431521-44431540 Msa0502330:intron 20.0%
!!! ATTAACTTGGGAAAAAATAA+AGG + chr3_4:44431575-44431594 Msa0502330:intron 20.0%
!! CTATATATTACGAAAGATTT+GGG - chr3_4:44431746-44431765 None:intergenic 20.0%
!! GAAACAATTGAAAAACAAAA+AGG - chr3_4:44431856-44431875 None:intergenic 20.0%
!! CTCATTATGAAATATGAAAA+TGG + chr3_4:44432196-44432215 Msa0502330:intron 20.0%
!! TGAAAATTAGTTATTCATGT+TGG + chr3_4:44432425-44432444 Msa0502330:intron 20.0%
!!! ACTACTATAGTTTTTCATTT+TGG - chr3_4:44432546-44432565 None:intergenic 20.0%
!!! AAAATGTAGCATAATTTTGA+GGG - chr3_4:44433093-44433112 None:intergenic 20.0%
!!! AAAATGTAGCATAATTTTGA+GGG - chr3_4:44433093-44433112 None:intergenic 20.0%
!!! TAAAATGTAGCATAATTTTG+AGG - chr3_4:44433194-44433213 None:intergenic 20.0%
!! GAATGATAATAGATATTCAT+TGG + chr3_4:44433298-44433317 Msa0502330:intron 20.0%
!!! TTTTCATAATTTTCTTCCAT+TGG + chr3_4:44433489-44433508 Msa0502330:intron 20.0%
!!! TAGGGTATTATTTTTCATTT+AGG + chr3_4:44433587-44433606 Msa0502330:intron 20.0%
!!! AGGGTATTATTTTTCATTTA+GGG + chr3_4:44433588-44433607 Msa0502330:intron 20.0%
!!! TTTTTTTGATGTCCATATTA+GGG - chr3_4:44433617-44433636 None:intergenic 20.0%
!! TAATATGGACATCAAAAAAA+GGG + chr3_4:44433617-44433636 Msa0502330:intron 20.0%
!!! TATTTTACTAAAAATTGTGG+GGG - chr3_4:44433656-44433675 None:intergenic 20.0%
!!! GTATTTTACTAAAAATTGTG+GGG - chr3_4:44433657-44433676 None:intergenic 20.0%
!!! GGTATTTTACTAAAAATTGT+GGG - chr3_4:44433658-44433677 None:intergenic 20.0%
!! TCAAAAAAATAAACGGAAAA+AGG - chr3_4:44433684-44433703 None:intergenic 20.0%
!! GGAATTGTCAAAAAAATAAA+CGG - chr3_4:44433691-44433710 None:intergenic 20.0%
!!! ATTATTACCCTTATTTCTTA+GGG - chr3_4:44433767-44433786 None:intergenic 20.0%
!!! AATTATTACCCTTATTTCTT+AGG - chr3_4:44433768-44433787 None:intergenic 20.0%
!! TCTGTATATATAATGTTTGA+AGG - chr3_4:44433898-44433917 None:intergenic 20.0%
!! TAGTTATAAAAGGTTAAACA+CGG - chr3_4:44434786-44434805 None:intergenic 20.0%
!! AATTTGGCTATAGTTATAAA+AGG - chr3_4:44434796-44434815 None:intergenic 20.0%
!!! TTTTATAACTATAGCCAAAT+TGG + chr3_4:44434795-44434814 Msa0502330:three_prime_UTR 20.0%
!! AAATTGATTATTCATCACAT+AGG + chr3_4:44435102-44435121 Msa0502330:three_prime_UTR 20.0%
!!! AAAATTTTGATGTCAGGATT+TGG - chr3_4:44428983-44429002 None:intergenic 25.0%
!!! TTAGTGAAAATTTTGATGTC+AGG - chr3_4:44428989-44429008 None:intergenic 25.0%
!! GTTTTGTGTTTCTCTATAAA+GGG - chr3_4:44429031-44429050 None:intergenic 25.0%
!! AGTTTTTGAATTTGATCGTT+TGG + chr3_4:44429575-44429594 Msa0502330:intron 25.0%
!! GTTTTTGAATTTGATCGTTT+GGG + chr3_4:44429576-44429595 Msa0502330:intron 25.0%
!! TAAATTCATTGGTTAGTTGT+TGG + chr3_4:44429730-44429749 Msa0502330:intron 25.0%
!! AAATTCATTGGTTAGTTGTT+GGG + chr3_4:44429731-44429750 Msa0502330:intron 25.0%
!!! GTTTTTGACTTTAATTGTTG+GGG + chr3_4:44429883-44429902 Msa0502330:intron 25.0%
!! TAAATTCATTGGTTAGTTGT+TGG + chr3_4:44429730-44429749 Msa0502330:intron 25.0%
!! AAATTCATTGGTTAGTTGTT+GGG + chr3_4:44429731-44429750 Msa0502330:intron 25.0%
!!! ATCAGGGTATTTGTTATTTA+TGG + chr3_4:44430606-44430625 Msa0502330:intron 25.0%
! TTGGTGAATGAAATTATGAA+AGG + chr3_4:44430836-44430855 Msa0502330:intron 25.0%
! AATGAGAACAATTTAGAGAT+TGG + chr3_4:44430908-44430927 Msa0502330:intron 25.0%
! CTAGAATGTAACTACATTTA+TGG - chr3_4:44431052-44431071 None:intergenic 25.0%
! GAACCTTGAAAATAAGTTAA+GGG - chr3_4:44431094-44431113 None:intergenic 25.0%
!!! CTTAACTTATTTTCAAGGTT+CGG + chr3_4:44431093-44431112 Msa0502330:intron 25.0%
!!! TTTTTTTTTCCTTCTCAAGT+TGG + chr3_4:44431140-44431159 Msa0502330:intron 25.0%
! ACTGTTAAATAACACTTATG+TGG + chr3_4:44431215-44431234 Msa0502330:intron 25.0%
!! TTGTCTAGAACTAAATTTCT+AGG - chr3_4:44431389-44431408 None:intergenic 25.0%
!!! ATTTAGTTCTAGACAAGAAT+TGG + chr3_4:44431393-44431412 Msa0502330:intron 25.0%
! TCCGTATCTACAAAAAAAAT+TGG + chr3_4:44431459-44431478 Msa0502330:intron 25.0%
!!! GCCAATTTTTTTTGTAGATA+CGG - chr3_4:44431463-44431482 None:intergenic 25.0%
! GTTTCAGTTAAAAAAATCCT+AGG - chr3_4:44431512-44431531 None:intergenic 25.0%
! TTAATCCTTTGTGTTACAAA+AGG - chr3_4:44431560-44431579 None:intergenic 25.0%
! GCTATATATTACGAAAGATT+TGG - chr3_4:44431747-44431766 None:intergenic 25.0%
! AAAATTATGTTAAAGGACTC+CGG + chr3_4:44431805-44431824 Msa0502330:intron 25.0%
! GAATCAAAAAAAATTACTCC+CGG - chr3_4:44431827-44431846 None:intergenic 25.0%
! ACAATTGAAAAACAAAAAGG+AGG - chr3_4:44431853-44431872 None:intergenic 25.0%
! AACATAGTAGAATCATAACA+AGG + chr3_4:44432506-44432525 Msa0502330:intron 25.0%
!!! GTAAGAAATAGGGTTTTTTA+GGG + chr3_4:44432956-44432975 Msa0502330:intron 25.0%
!!! TAAGAAATAGGGTTTTTTAG+GGG + chr3_4:44432957-44432976 Msa0502330:intron 25.0%
!!! TTTTTTAGGGGTAAAATTGT+GGG + chr3_4:44432969-44432988 Msa0502330:intron 25.0%
!! CAAAATGTAGCATAATTTTG+AGG - chr3_4:44433094-44433113 None:intergenic 25.0%
!! CTCAAAATTATGCTACATTT+TGG + chr3_4:44433092-44433111 Msa0502330:intron 25.0%
!! AAACTGCAACATAATTTTGA+GGG - chr3_4:44433133-44433152 None:intergenic 25.0%
! AAAATTATGTTGCAGTTTGT+AGG + chr3_4:44433135-44433154 Msa0502330:intron 25.0%
! TTTCTAATAATGATACCACT+GGG + chr3_4:44433240-44433259 Msa0502330:intron 25.0%
! TGATAATAGATATTCATTGG+TGG + chr3_4:44433301-44433320 Msa0502330:intron 25.0%
!!! AAATGGAAGTTTGTTTTGTT+AGG + chr3_4:44433568-44433587 Msa0502330:intron 25.0%
!!! AATGGAAGTTTGTTTTGTTA+GGG + chr3_4:44433569-44433588 Msa0502330:intron 25.0%
!!! CTTTTTTTGATGTCCATATT+AGG - chr3_4:44433618-44433637 None:intergenic 25.0%
! CTAATATGGACATCAAAAAA+AGG + chr3_4:44433616-44433635 Msa0502330:intron 25.0%
! AATATGGACATCAAAAAAAG+GGG + chr3_4:44433618-44433637 Msa0502330:intron 25.0%
!! CGGTATTTTACTAAAAATTG+TGG - chr3_4:44433659-44433678 None:intergenic 25.0%
!! AGTTTCTTCCAATATTTTTC+AGG + chr3_4:44433976-44433995 Msa0502330:intron 25.0%
! TACTATGTTATTGAGAATTG+AGG + chr3_4:44435188-44435207 Msa0502330:three_prime_UTR 25.0%
TGAAGATGAAAAGGAATAGT+AGG - chr3_4:44428898-44428917 None:intergenic 30.0%
!! GGTTTTGTGTTTCTCTATAA+AGG - chr3_4:44429032-44429051 None:intergenic 30.0%
AAACCCATATCTTAAAACCA+TGG + chr3_4:44429047-44429066 Msa0502330:CDS 30.0%
TGATTTGATTGGTAAGATGA+AGG + chr3_4:44429480-44429499 Msa0502330:CDS 30.0%
! TTGTGATAAGGTAAGGTTTT+AGG + chr3_4:44429525-44429544 Msa0502330:intron 30.0%
! TGGGTTGTTATTATGGTTAT+CGG + chr3_4:44429595-44429614 Msa0502330:intron 30.0%
! GATTAATTTTCATACACGGT+CGG + chr3_4:44429624-44429643 Msa0502330:intron 30.0%
! AATTCATTGGTTAGTTGTTG+GGG + chr3_4:44429732-44429751 Msa0502330:intron 30.0%
!! GGAGTTTAATTTTCATAGGT+TGG + chr3_4:44429925-44429944 Msa0502330:intron 30.0%
!! TGTTGTCAGGTTTAGAATTT+TGG + chr3_4:44430105-44430124 Msa0502330:intron 30.0%
CTTGTGATGAAATCAAACTT+AGG + chr3_4:44430134-44430153 Msa0502330:intron 30.0%
! ACTTAGGTATTTGCCATTTA+TGG + chr3_4:44430150-44430169 Msa0502330:intron 30.0%
AGTTTATGAGTTTGATCAGT+TGG + chr3_4:44430269-44430288 Msa0502330:intron 30.0%
GTTTATGAGTTTGATCAGTT+GGG + chr3_4:44430270-44430289 Msa0502330:intron 30.0%
! TGGAGATTAATTTTCATCCA+CGG + chr3_4:44430309-44430328 Msa0502330:intron 30.0%
! TACTTTTCCAGTCATACATA+TGG - chr3_4:44430376-44430395 None:intergenic 30.0%
CATGTATGAATTCAATTCTC+TGG + chr3_4:44430475-44430494 Msa0502330:intron 30.0%
! AATTCTCTGGTTAGTTATTG+TGG + chr3_4:44430488-44430507 Msa0502330:intron 30.0%
TGAAGTTTAAGAGATGTTGA+TGG + chr3_4:44430684-44430703 Msa0502330:intron 30.0%
!! TTAGTTTCTCTTTTAAGAGG+TGG + chr3_4:44430763-44430782 Msa0502330:intron 30.0%
!! TAGTTTCTCTTTTAAGAGGT+GGG + chr3_4:44430764-44430783 Msa0502330:intron 30.0%
AATGAAATTATGAAAGGCAG+AGG + chr3_4:44430842-44430861 Msa0502330:intron 30.0%
AGAACAATTTAGAGATTGGA+GGG + chr3_4:44430912-44430931 Msa0502330:intron 30.0%
! GATGAGAAATTTTCCAAAAC+AGG + chr3_4:44430949-44430968 Msa0502330:intron 30.0%
! ATACAAAGGTTTACCTGTTT+TGG - chr3_4:44430965-44430984 None:intergenic 30.0%
ACAGGTAAACCTTTGTATAA+CGG + chr3_4:44430967-44430986 Msa0502330:intron 30.0%
TGTTTGATTCCGTTATACAA+AGG - chr3_4:44430979-44430998 None:intergenic 30.0%
!! GTTCCCTTAACTTATTTTCA+AGG + chr3_4:44431088-44431107 Msa0502330:intron 30.0%
CGAACCTTGAAAATAAGTTA+AGG - chr3_4:44431095-44431114 None:intergenic 30.0%
GACGTCATCATTAATGAAAA+AGG + chr3_4:44431256-44431275 Msa0502330:intron 30.0%
! AGGAACTAATCTTGTTGTAA+GGG - chr3_4:44431428-44431447 None:intergenic 30.0%
TCAGTTAAAAAAATCCTAGG+TGG - chr3_4:44431509-44431528 None:intergenic 30.0%
AAACACAAAAAAAGGGTCAA+TGG + chr3_4:44431528-44431547 Msa0502330:intron 30.0%
TGTAACACAAAGGATTAACT+TGG + chr3_4:44431562-44431581 Msa0502330:intron 30.0%
GTAACACAAAGGATTAACTT+GGG + chr3_4:44431563-44431582 Msa0502330:intron 30.0%
AAATTATGTTAAAGGACTCC+GGG + chr3_4:44431806-44431825 Msa0502330:intron 30.0%
! TTTTATATGCTTTTGACACG+AGG + chr3_4:44431935-44431954 Msa0502330:intron 30.0%
!! TATGTTTCTTCTAGAGTTAC+TGG + chr3_4:44432053-44432072 Msa0502330:CDS 30.0%
TTTGTCATTAGCTGTTTACT+TGG + chr3_4:44432279-44432298 Msa0502330:intron 30.0%
!! GAAAACAAAACTCTAAAGTG+AGG + chr3_4:44432316-44432335 Msa0502330:intron 30.0%
TTTGGATGTTATGCAACTTA+TGG - chr3_4:44432663-44432682 None:intergenic 30.0%
!!! CGTAAGAAATAGGGTTTTTT+AGG + chr3_4:44432955-44432974 Msa0502330:intron 30.0%
!!! GTTTTTTAGGGGTAAAATTG+TGG + chr3_4:44432968-44432987 Msa0502330:intron 30.0%
GGTAGTGATTTAAATGAACT+GGG + chr3_4:44432990-44433009 Msa0502330:intron 30.0%
!!! AATTATGCTACATTTTGGCT+AGG + chr3_4:44433097-44433116 Msa0502330:intron 30.0%
!!! ATTATGCTACATTTTGGCTA+GGG + chr3_4:44433098-44433117 Msa0502330:intron 30.0%
! CAAACTGCAACATAATTTTG+AGG - chr3_4:44433134-44433153 None:intergenic 30.0%
CTTTCTAATAATGATACCAC+TGG + chr3_4:44433239-44433258 Msa0502330:intron 30.0%
TTCTTATCAGCTACATTTGA+TGG - chr3_4:44433275-44433294 None:intergenic 30.0%
! TAGATATTCATTGGTGGTAT+AGG + chr3_4:44433307-44433326 Msa0502330:intron 30.0%
ACAGAATAATAACTCGTGTT+TGG - chr3_4:44433438-44433457 None:intergenic 30.0%
AAAATAAACGGAAAAAGGTG+CGG - chr3_4:44433679-44433698 None:intergenic 30.0%
TAATGTGGACATAAGAAAAG+GGG - chr3_4:44433738-44433757 None:intergenic 30.0%
CTAATGTGGACATAAGAAAA+GGG - chr3_4:44433739-44433758 None:intergenic 30.0%
! CTTTTCTTATGTCCACATTA+GGG + chr3_4:44433738-44433757 Msa0502330:intron 30.0%
! TTTTCTTATGTCCACATTAG+GGG + chr3_4:44433739-44433758 Msa0502330:intron 30.0%
TTGTGATTAATCTGTAGTTG+TGG + chr3_4:44433817-44433836 Msa0502330:intron 30.0%
! TTAATCTGTAGTTGTGGTTT+TGG + chr3_4:44433823-44433842 Msa0502330:intron 30.0%
!! TTTCTTAGTTTGATTTGCCT+TGG + chr3_4:44433931-44433950 Msa0502330:intron 30.0%
AGATATGCTAAAAACTTCAC+CGG + chr3_4:44434040-44434059 Msa0502330:CDS 30.0%
! ACGGAAGATATATTTTGCAA+CGG + chr3_4:44434130-44434149 Msa0502330:CDS 30.0%
TGAGTTTGGAGAAATGATTA+GGG + chr3_4:44434210-44434229 Msa0502330:CDS 30.0%
TGTTTGAATCCTTGAACAAT+TGG + chr3_4:44434380-44434399 Msa0502330:CDS 30.0%
GTTTGAATCCTTGAACAATT+GGG + chr3_4:44434381-44434400 Msa0502330:CDS 30.0%
TGTAAAATCAACCTTGTCAA+CGG + chr3_4:44434421-44434440 Msa0502330:CDS 30.0%
!!! ATCTCTAGAATCACAGTTTT+AGG - chr3_4:44434553-44434572 None:intergenic 30.0%
TATCATGCAATTAACCTTGA+CGG + chr3_4:44434634-44434653 Msa0502330:CDS 30.0%
TAACTATAGCCAAATTGGTT+TGG + chr3_4:44434800-44434819 Msa0502330:three_prime_UTR 30.0%
! CAATTTTCTTCAGTTGAACA+TGG - chr3_4:44434901-44434920 None:intergenic 30.0%
ATAGGACTACATTGTACAAT+AGG + chr3_4:44435120-44435139 Msa0502330:three_prime_UTR 30.0%
TCATTCCAATAGAACAATAG+AGG - chr3_4:44435156-44435175 None:intergenic 30.0%
TCTAGACTAGATACTGTGTT+TGG - chr3_4:44428821-44428840 None:intergenic 35.0%
AGAAGGAGTTGAAGATGAAA+AGG - chr3_4:44428907-44428926 None:intergenic 35.0%
!!! TGGCCATGGTTTTAAGATAT+GGG - chr3_4:44429053-44429072 None:intergenic 35.0%
!!! TTGGCCATGGTTTTAAGATA+TGG - chr3_4:44429054-44429073 None:intergenic 35.0%
GGTGAATATGAAGGTAGAAT+TGG - chr3_4:44429073-44429092 None:intergenic 35.0%
TTCTACCTTCATATTCACCA+TGG + chr3_4:44429074-44429093 Msa0502330:CDS 35.0%
CTTCAAATTCAACTCCACTA+CGG + chr3_4:44429104-44429123 Msa0502330:CDS 35.0%
!!! TGTGAGGGTTATTTTGGTAA+TGG + chr3_4:44429130-44429149 Msa0502330:CDS 35.0%
GAGAGGATAAAAATGGCAAA+GGG + chr3_4:44429280-44429299 Msa0502330:CDS 35.0%
TATTGGAAGAAGTGAAGATG+AGG + chr3_4:44429324-44429343 Msa0502330:CDS 35.0%
CATACTATGCGTGATTTGAT+TGG + chr3_4:44429469-44429488 Msa0502330:CDS 35.0%
ATTGGTAAGATGAAGGTTGT+TGG + chr3_4:44429487-44429506 Msa0502330:CDS 35.0%
!! GATCGTTTGGGTTGTTATTA+TGG + chr3_4:44429588-44429607 Msa0502330:intron 35.0%
GAAAGAATCTGATTGTGATC+AGG + chr3_4:44429813-44429832 Msa0502330:intron 35.0%
! TTTAATTGTTGGGGCGTTTA+TGG + chr3_4:44429892-44429911 Msa0502330:intron 35.0%
! GGCGTTTATGGTTATTGATT+AGG + chr3_4:44429904-44429923 Msa0502330:intron 35.0%
! TTTGGAATTTGCTTCTGATC+AGG + chr3_4:44430197-44430216 Msa0502330:intron 35.0%
TTTGATCAGTTGGGTGTTTA+TGG + chr3_4:44430279-44430298 Msa0502330:intron 35.0%
! GATTAATTTTCATCCACGGT+CGG + chr3_4:44430313-44430332 Msa0502330:intron 35.0%
TCTTGTGACGAAATCGAAAT+AGG + chr3_4:44430548-44430567 Msa0502330:intron 35.0%
! TTGATTTTCGAATCAGTGCT+TGG + chr3_4:44430643-44430662 Msa0502330:intron 35.0%
AGGCAGAGGATTTAATGTAA+CGG + chr3_4:44430856-44430875 Msa0502330:intron 35.0%
GAGGATTTAATGTAACGGTT+AGG + chr3_4:44430861-44430880 Msa0502330:intron 35.0%
GAGAACAATTTAGAGATTGG+AGG + chr3_4:44430911-44430930 Msa0502330:intron 35.0%
CATAAAGAACCAACTTGAGA+AGG - chr3_4:44431152-44431171 None:intergenic 35.0%
ACAGAAACTCGAAGAAGTTA+CGG - chr3_4:44431192-44431211 None:intergenic 35.0%
! GAGGAACTAATCTTGTTGTA+AGG - chr3_4:44431429-44431448 None:intergenic 35.0%
! AGATACGGATTTCTAAGAAG+AGG - chr3_4:44431448-44431467 None:intergenic 35.0%
CTAGGTGGCTATTATTTGTA+AGG - chr3_4:44431494-44431513 None:intergenic 35.0%
CTTACAAATAATAGCCACCT+AGG + chr3_4:44431492-44431511 Msa0502330:intron 35.0%
! GCTATCCTTTTGTAACACAA+AGG + chr3_4:44431552-44431571 Msa0502330:intron 35.0%
ATAGTAAGAATCCGTGTAAC+TGG + chr3_4:44431631-44431650 Msa0502330:intron 35.0%
! GACACAATAACTCTCCTTTT+TGG - chr3_4:44431678-44431697 None:intergenic 35.0%
TATTTCACACTGTTACAGAC+TGG + chr3_4:44432021-44432040 Msa0502330:CDS 35.0%
AAGATCAAATGAGGTCGATT+AGG - chr3_4:44432083-44432102 None:intergenic 35.0%
CCATCTACAAAGATCAAATG+AGG - chr3_4:44432092-44432111 None:intergenic 35.0%
CCTCATTTGATCTTTGTAGA+TGG + chr3_4:44432089-44432108 Msa0502330:CDS 35.0%
TTTGTGATTCCGATTAGGAA+AGG + chr3_4:44432340-44432359 Msa0502330:intron 35.0%
ATTGAGATGCAACCTAAGAT+CGG + chr3_4:44432461-44432480 Msa0502330:intron 35.0%
GTATGTATGCATGCAAAACA+TGG + chr3_4:44432579-44432598 Msa0502330:intron 35.0%
AGTAGTAGTAGTAGATGTAG+TGG - chr3_4:44432780-44432799 None:intergenic 35.0%
AGAGCTTCACGTAAGAAATA+GGG + chr3_4:44432946-44432965 Msa0502330:intron 35.0%
GGGTAGTGATTTAAATGAAC+TGG + chr3_4:44432989-44433008 Msa0502330:intron 35.0%
ACACATCACATCTTCTTTCT+TGG + chr3_4:44433351-44433370 Msa0502330:intron 35.0%
ATCACATCTTCTTTCTTGGT+TGG + chr3_4:44433355-44433374 Msa0502330:intron 35.0%
ACAAATTTGCACTTGAACCT+TGG - chr3_4:44433384-44433403 None:intergenic 35.0%
! GGTTCAAGTGCAAATTTGTT+AGG + chr3_4:44433385-44433404 Msa0502330:intron 35.0%
!! GTGCAAATTTGTTAGGTACT+TGG + chr3_4:44433392-44433411 Msa0502330:intron 35.0%
TCTAACTCAATATGCTCCAA+TGG - chr3_4:44433508-44433527 None:intergenic 35.0%
GAGCATATTGAGTTAGAACA+TGG + chr3_4:44433511-44433530 Msa0502330:intron 35.0%
AGAACATGGTTCTCATTATG+TGG + chr3_4:44433525-44433544 Msa0502330:intron 35.0%
! TTTTGATGTCCATATTAGGG+AGG - chr3_4:44433614-44433633 None:intergenic 35.0%
! TTTGACAATTCCCACCATTT+TGG + chr3_4:44433699-44433718 Msa0502330:intron 35.0%
! TTGACAATTCCCACCATTTT+GGG + chr3_4:44433700-44433719 Msa0502330:intron 35.0%
CCTAATGTGGACATAAGAAA+AGG - chr3_4:44433740-44433759 None:intergenic 35.0%
! CCTTTTCTTATGTCCACATT+AGG + chr3_4:44433737-44433756 Msa0502330:intron 35.0%
ATTATCAACGAATTCTGCCA+AGG - chr3_4:44433951-44433970 None:intergenic 35.0%
AAGTGGAGCCTGAAAAATAT+TGG - chr3_4:44433987-44434006 None:intergenic 35.0%
ATGACGAAAACATACTGTTC+CGG - chr3_4:44434062-44434081 None:intergenic 35.0%
TATGAGACTGCTCTCTTTAA+AGG + chr3_4:44434103-44434122 Msa0502330:CDS 35.0%
ATGAGACTGCTCTCTTTAAA+GGG + chr3_4:44434104-44434123 Msa0502330:CDS 35.0%
!!! ACGTGCAGTTTTTTCGTTAT+CGG - chr3_4:44434185-44434204 None:intergenic 35.0%
CTGAGTTTGGAGAAATGATT+AGG + chr3_4:44434209-44434228 Msa0502330:CDS 35.0%
! GAAATGATTAGGGCATCATT+TGG + chr3_4:44434220-44434239 Msa0502330:CDS 35.0%
CCAACATGGTGTAAGTTTAA+AGG - chr3_4:44434250-44434269 None:intergenic 35.0%
CCTTTAAACTTACACCATGT+TGG + chr3_4:44434247-44434266 Msa0502330:CDS 35.0%
TGAATCAAGACTAAGTAACG+AGG + chr3_4:44434351-44434370 Msa0502330:CDS 35.0%
AATTGGGCGTCTAATTACAA+AGG + chr3_4:44434397-44434416 Msa0502330:CDS 35.0%
ATTGGGCGTCTAATTACAAA+GGG + chr3_4:44434398-44434417 Msa0502330:CDS 35.0%
ATCATGCAATTAACCTTGAC+GGG + chr3_4:44434635-44434654 Msa0502330:CDS 35.0%
ATTGATCACAGTTTCAGGAT+TGG - chr3_4:44434668-44434687 None:intergenic 35.0%
TTCAAAACAGTCAACATCGA+AGG - chr3_4:44434714-44434733 None:intergenic 35.0%
! TGGAATTGCTGATAACTTGT+TGG + chr3_4:44434835-44434854 Msa0502330:three_prime_UTR 35.0%
AATTGCAGAGTTCAGTGAAA+AGG + chr3_4:44434916-44434935 Msa0502330:three_prime_UTR 35.0%
ATTGCAGAGTTCAGTGAAAA+GGG + chr3_4:44434917-44434936 Msa0502330:three_prime_UTR 35.0%
TTTATGTAGCATAGTACCTG+AGG + chr3_4:44434965-44434984 Msa0502330:three_prime_UTR 35.0%
CCTCATCTGTATACAACATA+GGG - chr3_4:44435060-44435079 None:intergenic 35.0%
CCTATGTTGTATACAGATGA+GGG + chr3_4:44435058-44435077 Msa0502330:three_prime_UTR 35.0%
CTATGTTGTATACAGATGAG+GGG + chr3_4:44435059-44435078 Msa0502330:three_prime_UTR 35.0%
CCAATAGAACAATAGAGGTA+AGG - chr3_4:44435151-44435170 None:intergenic 35.0%
CCTTACCTCTATTGTTCTAT+TGG + chr3_4:44435148-44435167 Msa0502330:three_prime_UTR 35.0%
GAGAGAAGCTATGAACAAGA+AGG + chr3_4:44428865-44428884 Msa0502330:exon 40.0%
GAAGTAAAGACAGAGAGAGA+AGG - chr3_4:44428924-44428943 None:intergenic 40.0%
GTGTAGGGTTGAGAAAAGAA+GGG - chr3_4:44428955-44428974 None:intergenic 40.0%
!! TTGATGTCAGGATTTGGTGA+TGG - chr3_4:44428977-44428996 None:intergenic 40.0%
TCTATAAAGGGTCGTCGAAA+AGG - chr3_4:44429019-44429038 None:intergenic 40.0%
TATGAAGGTAGAATTGGCCA+TGG - chr3_4:44429067-44429086 None:intergenic 40.0%
TGTGACCATGGTGAATATGA+AGG - chr3_4:44429082-44429101 None:intergenic 40.0%
GAATTTGAAGGTTGTGACCA+TGG - chr3_4:44429094-44429113 None:intergenic 40.0%
! CGTAGTGGAGTTGAATTTGA+AGG - chr3_4:44429106-44429125 None:intergenic 40.0%
GTTGGTATAGTGAGACATTG+AGG + chr3_4:44429218-44429237 Msa0502330:CDS 40.0%
TTGAGGAGTTCAGTTTGTGA+AGG + chr3_4:44429235-44429254 Msa0502330:CDS 40.0%
GGAGAGGATAAAAATGGCAA+AGG + chr3_4:44429279-44429298 Msa0502330:CDS 40.0%
AGGATAAAAATGGCAAAGGG+TGG + chr3_4:44429283-44429302 Msa0502330:CDS 40.0%
GAGAGTTTGGGTGATGTTAT+TGG + chr3_4:44429307-44429326 Msa0502330:CDS 40.0%
! AAAGCACCATCCTCAAACAA+AGG - chr3_4:44429355-44429374 None:intergenic 40.0%
!! TTGATGAGGGGTTTTTGGAT+AGG + chr3_4:44429419-44429438 Msa0502330:CDS 40.0%
TTGGATAGGTATGTTCCTAG+AGG + chr3_4:44429433-44429452 Msa0502330:CDS 40.0%
TGGATAGGTATGTTCCTAGA+GGG + chr3_4:44429434-44429453 Msa0502330:CDS 40.0%
GTAAGATGAAGGTTGTTGGA+AGG + chr3_4:44429491-44429510 Msa0502330:CDS 40.0%
AATCTGATTGTGATCAGGTG+AGG + chr3_4:44429818-44429837 Msa0502330:intron 40.0%
ATTGTGATCAGGTGAGGTTT+AGG + chr3_4:44429824-44429843 Msa0502330:intron 40.0%
! TGGTTAGTTGTTGGGATGAA+TGG + chr3_4:44430079-44430098 Msa0502330:intron 40.0%
GGATGAATGGAATTGTTGTC+AGG + chr3_4:44430092-44430111 Msa0502330:intron 40.0%
! AATTTGCTTCTGATCAGGTG+AGG + chr3_4:44430202-44430221 Msa0502330:intron 40.0%
TCAGTTGGGTGTTTATGGTT+TGG + chr3_4:44430284-44430303 Msa0502330:intron 40.0%
!! TGGGTGTTTATGGTTTGGTT+TGG + chr3_4:44430289-44430308 Msa0502330:intron 40.0%
CACTCATCCATATGTATGAC+TGG + chr3_4:44430366-44430385 Msa0502330:intron 40.0%
TTCGAATCAGTGCTTGGATT+TGG + chr3_4:44430649-44430668 Msa0502330:intron 40.0%
!! TTTCTCTTTTAAGAGGTGGG+TGG + chr3_4:44430767-44430786 Msa0502330:intron 40.0%
!! TTCTCTTTTAAGAGGTGGGT+GGG + chr3_4:44430768-44430787 Msa0502330:intron 40.0%
TGGGTGGGATACTTATCTTT+CGG + chr3_4:44430783-44430802 Msa0502330:intron 40.0%
TCTTTCGGATCGACCTTATA+TGG + chr3_4:44430798-44430817 Msa0502330:intron 40.0%
GATGGCTAATATCTGGTTAG+AGG + chr3_4:44431026-44431045 Msa0502330:intron 40.0%
CAGAAACTCGAAGAAGTTAC+GGG - chr3_4:44431191-44431210 None:intergenic 40.0%
!! CTCCTTTTTGGCAGAATACA+CGG - chr3_4:44431666-44431685 None:intergenic 40.0%
!! TTTCTATTCGCAGTGGATTG+AGG + chr3_4:44431959-44431978 Msa0502330:intron 40.0%
CTTTGTAGATGGACACTGTA+AGG + chr3_4:44432100-44432119 Msa0502330:CDS 40.0%
!! GAGGTTTTGTGATTCCGATT+AGG + chr3_4:44432335-44432354 Msa0502330:intron 40.0%
CTCAACGATCCTTTCCTAAT+CGG - chr3_4:44432352-44432371 None:intergenic 40.0%
ACTACTACTACCATCAGCTT+TGG + chr3_4:44432791-44432810 Msa0502330:intron 40.0%
CTCTTTCTTGTTCTCTCATC+TGG - chr3_4:44432844-44432863 None:intergenic 40.0%
TGAGAGAACAAGAAAGAGAC+AGG + chr3_4:44432846-44432865 Msa0502330:intron 40.0%
GAGAGAACAAGAAAGAGACA+GGG + chr3_4:44432847-44432866 Msa0502330:intron 40.0%
TGAGAGATTGGAGAACATAG+TGG + chr3_4:44432893-44432912 Msa0502330:intron 40.0%
TAAATCGCAAGAGAGAGACA+TGG + chr3_4:44432920-44432939 Msa0502330:intron 40.0%
GAGAGCTTCACGTAAGAAAT+AGG + chr3_4:44432945-44432964 Msa0502330:intron 40.0%
!! TCTTTCTTGGTTGGTTTCCA+AGG + chr3_4:44433364-44433383 Msa0502330:intron 40.0%
CTTTCTTCTTCGCTGCTAAA+TGG + chr3_4:44433551-44433570 Msa0502330:intron 40.0%
CATCAAAAAAAGGGGTCTGT+AGG + chr3_4:44433626-44433645 Msa0502330:intron 40.0%
ACATAAGAAAAGGGGTCCAA+AGG - chr3_4:44433730-44433749 None:intergenic 40.0%
!! TAGGGGTACCCTAAGAAATA+AGG + chr3_4:44433756-44433775 Msa0502330:intron 40.0%
!! AGGGGTACCCTAAGAAATAA+GGG + chr3_4:44433757-44433776 Msa0502330:intron 40.0%
TCATGCTATTCTCTCACCTT+TGG + chr3_4:44434078-44434097 Msa0502330:CDS 40.0%
CATGCTATTCTCTCACCTTT+GGG + chr3_4:44434079-44434098 Msa0502330:CDS 40.0%
! TGCTCTCTTTAAAGGGCTAA+CGG + chr3_4:44434111-44434130 Msa0502330:CDS 40.0%
!!! CGTGCAGTTTTTTCGTTATC+GGG - chr3_4:44434184-44434203 None:intergenic 40.0%
! ACTGCACGTATTTCTGAGTT+TGG + chr3_4:44434196-44434215 Msa0502330:CDS 40.0%
AATCTTCACGACGAACAAAC+AGG - chr3_4:44434300-44434319 None:intergenic 40.0%
! TATTTAGCTCATCCACGTCA+CGG + chr3_4:44434319-44434338 Msa0502330:CDS 40.0%
ATTAGACGCCCAATTGTTCA+AGG - chr3_4:44434392-44434411 None:intergenic 40.0%
ACACATGTCTATGAAGGAAC+AGG + chr3_4:44434453-44434472 Msa0502330:CDS 40.0%
TGTCTATGAAGGAACAGGTA+CGG + chr3_4:44434458-44434477 Msa0502330:CDS 40.0%
CAAGATGCATCTGTGATCAT+TGG + chr3_4:44434487-44434506 Msa0502330:CDS 40.0%
AGATTATTAGCAGCCAGTTC+AGG + chr3_4:44434569-44434588 Msa0502330:CDS 40.0%
! ATTTTGCGTACATTGCACGA+TGG + chr3_4:44434599-44434618 Msa0502330:CDS 40.0%
GCTCAGTAACCAAACCAATT+TGG - chr3_4:44434812-44434831 None:intergenic 40.0%
!! TGGTTTGGTTACTGAGCTAA+TGG + chr3_4:44434815-44434834 Msa0502330:three_prime_UTR 40.0%
TTGCAGAGTTCAGTGAAAAG+GGG + chr3_4:44434918-44434937 Msa0502330:three_prime_UTR 40.0%
TAGGGTCAAGGATCAAATGA+AGG - chr3_4:44435042-44435061 None:intergenic 40.0%
CTGTATACAACATAGGGTCA+AGG - chr3_4:44435054-44435073 None:intergenic 40.0%
CCCTATGTTGTATACAGATG+AGG + chr3_4:44435057-44435076 Msa0502330:three_prime_UTR 40.0%
CCCTCATCTGTATACAACAT+AGG - chr3_4:44435061-44435080 None:intergenic 40.0%
TAGAGAGAGAGAGAGAGAGT+AGG + chr3_4:44428837-44428856 Msa0502330:five_prime_UTR 45.0%
TAGGGTTGAGAAAAGAAGGG+TGG - chr3_4:44428952-44428971 None:intergenic 45.0%
GGTGTAGGGTTGAGAAAAGA+AGG - chr3_4:44428956-44428975 None:intergenic 45.0%
!! CAGGATTTGGTGATGGTGTA+GGG - chr3_4:44428970-44428989 None:intergenic 45.0%
!! TCAGGATTTGGTGATGGTGT+AGG - chr3_4:44428971-44428990 None:intergenic 45.0%
! CGGTCATGTGAGGGTTATTT+TGG + chr3_4:44429124-44429143 Msa0502330:CDS 45.0%
AGGAGTTCAGTTTGTGAAGG+TGG + chr3_4:44429238-44429257 Msa0502330:CDS 45.0%
GGAGTTCAGTTTGTGAAGGT+GGG + chr3_4:44429239-44429258 Msa0502330:CDS 45.0%
TTCAGTTTGTGAAGGTGGGA+GGG + chr3_4:44429243-44429262 Msa0502330:CDS 45.0%
!! GGTGGTGGAGAGGATAAAAA+TGG + chr3_4:44429273-44429292 Msa0502330:CDS 45.0%
! TGAGGAGTTGCCTTTGTTTG+AGG + chr3_4:44429342-44429361 Msa0502330:CDS 45.0%
! GAGTTGCCTTTGTTTGAGGA+TGG + chr3_4:44429346-44429365 Msa0502330:CDS 45.0%
! GTTTGAGGATGGTGCTTTTG+AGG + chr3_4:44429357-44429376 Msa0502330:CDS 45.0%
!!! GATGGTGCTTTTGAGGTTGA+TGG + chr3_4:44429364-44429383 Msa0502330:CDS 45.0%
!! TTTGAGGTTGATGGTGGTGT+AGG + chr3_4:44429373-44429392 Msa0502330:CDS 45.0%
!! TTGAGGTTGATGGTGGTGTA+GGG + chr3_4:44429374-44429393 Msa0502330:CDS 45.0%
! ATGGTGGTGTAGGGTTTGAA+AGG + chr3_4:44429383-44429402 Msa0502330:CDS 45.0%
! TGGTGGTGTAGGGTTTGAAA+GGG + chr3_4:44429384-44429403 Msa0502330:CDS 45.0%
! GGGAAGATGGTTGTTGATGA+GGG + chr3_4:44429406-44429425 Msa0502330:CDS 45.0%
! GGAAGATGGTTGTTGATGAG+GGG + chr3_4:44429407-44429426 Msa0502330:CDS 45.0%
!! GGTTGTTGATGAGGGGTTTT+TGG + chr3_4:44429414-44429433 Msa0502330:CDS 45.0%
GGATAGGTATGTTCCTAGAG+GGG + chr3_4:44429435-44429454 Msa0502330:CDS 45.0%
TGTCTCATAATCTCCCCTCT+AGG - chr3_4:44429451-44429470 None:intergenic 45.0%
CTTCTGATCAGGTGAGGTTT+AGG + chr3_4:44430208-44430227 Msa0502330:intron 45.0%
AAAACTCTTTCAACCGACCG+TGG - chr3_4:44430329-44430348 None:intergenic 45.0%
TTCGGATCGACCTTATATGG+CGG + chr3_4:44430801-44430820 Msa0502330:intron 45.0%
ATATCCCATGCCGCCATATA+AGG - chr3_4:44430814-44430833 None:intergenic 45.0%
! ATGGCGGCATGGGATATTTT+TGG + chr3_4:44430817-44430836 Msa0502330:intron 45.0%
AGATATTAGCCATCCCTAGC+TGG - chr3_4:44431020-44431039 None:intergenic 45.0%
AGCTAGGGATGGCTAATATC+TGG + chr3_4:44431019-44431038 Msa0502330:intron 45.0%
CTCCGTGTATTCTGCCAAAA+AGG + chr3_4:44431661-44431680 Msa0502330:intron 45.0%
! ACGAGGTTTTCTATTCGCAG+TGG + chr3_4:44431952-44431971 Msa0502330:intron 45.0%
GATTGAGGAACCAACACTTC+TGG + chr3_4:44431974-44431993 Msa0502330:CDS 45.0%
CGCAGCATCTTTAATGCTGT+TGG + chr3_4:44432225-44432244 Msa0502330:intron 45.0%
AGGAAAGGATCGTTGAGATC+TGG + chr3_4:44432355-44432374 Msa0502330:intron 45.0%
TGAGATCTGGAGAGTTCGAA+AGG + chr3_4:44432368-44432387 Msa0502330:intron 45.0%
ATGCAACCTAAGATCGGAGA+GGG + chr3_4:44432467-44432486 Msa0502330:intron 45.0%
GGGAAGTGAGAATGAGAGAT+TGG + chr3_4:44432881-44432900 Msa0502330:intron 45.0%
TTCTGCTGATGCGAGTATTC+AGG - chr3_4:44433028-44433047 None:intergenic 45.0%
!!! ATGCTACATTTTGGCTAGGG+AGG + chr3_4:44433101-44433120 Msa0502330:intron 45.0%
TTGCAGTTTGTAGGAGACTG+AGG + chr3_4:44433144-44433163 Msa0502330:intron 45.0%
TGATGGAAGAATTTGCCCAG+TGG - chr3_4:44433258-44433277 None:intergenic 45.0%
! CATTTAGGGCCTCCCTAATA+TGG + chr3_4:44433602-44433621 Msa0502330:intron 45.0%
CAAAAAAAGGGGTCTGTAGG+TGG + chr3_4:44433629-44433648 Msa0502330:intron 45.0%
TAAGAAAAGGGGTCCAAAGG+CGG - chr3_4:44433727-44433746 None:intergenic 45.0%
! TTCTTAGGGTACCCCTAATG+TGG - chr3_4:44433753-44433772 None:intergenic 45.0%
GCTTTCCATGTCTCTTCAAG+TGG - chr3_4:44434004-44434023 None:intergenic 45.0%
AGAGCAGTCTCATATCCCAA+AGG - chr3_4:44434097-44434116 None:intergenic 45.0%
GAGCTTCTGCACAAGAATTG+TGG + chr3_4:44434152-44434171 Msa0502330:CDS 45.0%
!!! CAGAGACTGGTTTTCCAACA+TGG - chr3_4:44434264-44434283 None:intergenic 45.0%
CATGTTGGAAAACCAGTCTC+TGG + chr3_4:44434262-44434281 Msa0502330:CDS 45.0%
ACATTATGTCCTCCAGAGAC+TGG - chr3_4:44434277-44434296 None:intergenic 45.0%
GTTCGCACACATGTCTATGA+AGG + chr3_4:44434447-44434466 Msa0502330:CDS 45.0%
GTCTATGAAGGAACAGGTAC+GGG + chr3_4:44434459-44434478 Msa0502330:CDS 45.0%
TCTGTGATCATTGGTGCACA+TGG + chr3_4:44434496-44434515 Msa0502330:CDS 45.0%
CGTGCAATGTACGCAAAATG+TGG - chr3_4:44434598-44434617 None:intergenic 45.0%
CGTACATTGCACGATGGAAA+GGG + chr3_4:44434605-44434624 Msa0502330:CDS 45.0%
! AGCGCATTGATCACAGTTTC+AGG - chr3_4:44434673-44434692 None:intergenic 45.0%
TGAAACTGTGATCAATGCGC+TGG + chr3_4:44434672-44434691 Msa0502330:CDS 45.0%
AACATGCTACATACTGCACC+AGG - chr3_4:44435002-44435021 None:intergenic 45.0%
!!! GTTTTTATTTTATTTTATTT+TGG + chr3_4:44430172-44430191 Msa0502330:intron 5.0%
!!! TTTTAATATAAAAAGATAAA+GGG - chr3_4:44431330-44431349 None:intergenic 5.0%
!!! TTTTTAATATAAAAAGATAA+AGG - chr3_4:44431331-44431350 None:intergenic 5.0%
!! AAAAAATAAAAATAAATGAA+TGG + chr3_4:44432602-44432621 Msa0502330:intron 5.0%
AACTCCACTACGGTCATGTG+AGG + chr3_4:44429114-44429133 Msa0502330:CDS 50.0%
ACTCCACTACGGTCATGTGA+GGG + chr3_4:44429115-44429134 Msa0502330:CDS 50.0%
TAACCCTCACATGACCGTAG+TGG - chr3_4:44429121-44429140 None:intergenic 50.0%
!! TGGTAATGGATTCACGCGCT+TGG + chr3_4:44429144-44429163 Msa0502330:CDS 50.0%
!! GTTGATGTGTTTTCGAGCCG+CGG + chr3_4:44429166-44429185 Msa0502330:CDS 50.0%
GTTCAGTTTGTGAAGGTGGG+AGG + chr3_4:44429242-44429261 Msa0502330:CDS 50.0%
GCAAAGGGTGGTGAGAGTTT+GGG + chr3_4:44429295-44429314 Msa0502330:CDS 50.0%
!!! GGTGCTTTTGAGGTTGATGG+TGG + chr3_4:44429367-44429386 Msa0502330:CDS 50.0%
GGTGGTGTAGGGTTTGAAAG+GGG + chr3_4:44429385-44429404 Msa0502330:CDS 50.0%
GTGGTGTAGGGTTTGAAAGG+GGG + chr3_4:44429386-44429405 Msa0502330:CDS 50.0%
AGGGTTTGAAAGGGGGAAGA+TGG + chr3_4:44429393-44429412 Msa0502330:CDS 50.0%
GGGGAAGATGGTTGTTGATG+AGG + chr3_4:44429405-44429424 Msa0502330:CDS 50.0%
ATCGACCTTATATGGCGGCA+TGG + chr3_4:44430806-44430825 Msa0502330:intron 50.0%
TCGACCTTATATGGCGGCAT+GGG + chr3_4:44430807-44430826 Msa0502330:intron 50.0%
AGAGATTGGAGGGAACGTGA+AGG + chr3_4:44430922-44430941 Msa0502330:intron 50.0%
GAGATTGGAGGGAACGTGAA+GGG + chr3_4:44430923-44430942 Msa0502330:intron 50.0%
AGATTGGAGGGAACGTGAAG+GGG + chr3_4:44430924-44430943 Msa0502330:intron 50.0%
AAGAATGCAGCTAGCCAGCT+AGG + chr3_4:44431003-44431022 Msa0502330:intron 50.0%
AGAATGCAGCTAGCCAGCTA+GGG + chr3_4:44431004-44431023 Msa0502330:intron 50.0%
! AAGCGTGTCACCAGAAGTGT+TGG - chr3_4:44431987-44432006 None:intergenic 50.0%
GATGCAACCTAAGATCGGAG+AGG + chr3_4:44432466-44432485 Msa0502330:intron 50.0%
TGCAACCTAAGATCGGAGAG+GGG + chr3_4:44432468-44432487 Msa0502330:intron 50.0%
TTGTTCTCTCATCTGGCACG+CGG - chr3_4:44432837-44432856 None:intergenic 50.0%
CAAGAAAGAGACAGGGTTGC+AGG + chr3_4:44432854-44432873 Msa0502330:intron 50.0%
! TGTAGGAGACTGAGGCCTTT+TGG + chr3_4:44433152-44433171 Msa0502330:intron 50.0%
!!! AGACTGAGGCCTTTTGGCTT+GGG + chr3_4:44433158-44433177 Msa0502330:intron 50.0%
TCTTCACCTCCCAAGCCAAA+AGG - chr3_4:44433170-44433189 None:intergenic 50.0%
AAAGGCGGACCCAAAATGGT+GGG - chr3_4:44433712-44433731 None:intergenic 50.0%
AGGCTCCACTTGAAGAGACA+TGG + chr3_4:44433996-44434015 Msa0502330:intron 50.0%
GTTGGAAAACCAGTCTCTGG+AGG + chr3_4:44434265-44434284 Msa0502330:CDS 50.0%
! TCAACTTTTCCACCGTGACG+TGG - chr3_4:44434334-44434353 None:intergenic 50.0%
GTGCGAACAATCCGTTGACA+AGG - chr3_4:44434435-44434454 None:intergenic 50.0%
ATCATTGGTGCACATGGTGC+TGG + chr3_4:44434502-44434521 Msa0502330:CDS 50.0%
CAAAATGTGGACGCCTGAAC+TGG - chr3_4:44434585-44434604 None:intergenic 50.0%
GCGTACATTGCACGATGGAA+AGG + chr3_4:44434604-44434623 Msa0502330:CDS 50.0%
CATTGCACGATGGAAAGGGT+TGG + chr3_4:44434609-44434628 Msa0502330:CDS 50.0%
CCAGGTACTATCAACACCTC+AGG - chr3_4:44434984-44435003 None:intergenic 50.0%
!! CCTGAGGTGTTGATAGTACC+TGG + chr3_4:44434981-44435000 Msa0502330:three_prime_UTR 50.0%
GAAGAGGAGGAGGGTGGTTT+AGG + chr3_4:44429194-44429213 Msa0502330:CDS 55.0%
GAGGAGGGTGGTTTAGGTGT+TGG + chr3_4:44429200-44429219 Msa0502330:CDS 55.0%
TTTGTGAAGGTGGGAGGGTG+AGG + chr3_4:44429248-44429267 Msa0502330:CDS 55.0%
GGCAAAGGGTGGTGAGAGTT+TGG + chr3_4:44429294-44429313 Msa0502330:CDS 55.0%
GGAGTGCATGGCCAGTTACA+CGG - chr3_4:44431645-44431664 None:intergenic 55.0%
GGCAGAATACACGGAGTGCA+TGG - chr3_4:44431657-44431676 None:intergenic 55.0%
GCAACCTAAGATCGGAGAGG+GGG + chr3_4:44432469-44432488 Msa0502330:intron 55.0%
!! GAGACTGAGGCCTTTTGGCT+TGG + chr3_4:44433157-44433176 Msa0502330:intron 55.0%
CAAAGGCGGACCCAAAATGG+TGG - chr3_4:44433713-44433732 None:intergenic 55.0%
!! CACCATTTTGGGTCCGCCTT+TGG + chr3_4:44433711-44433730 Msa0502330:intron 55.0%
GTCCAAAGGCGGACCCAAAA+TGG - chr3_4:44433716-44433735 None:intergenic 55.0%
TTAGCTCATCCACGTCACGG+TGG + chr3_4:44434322-44434341 Msa0502330:CDS 55.0%
GATTGGCATACGACCCGTCA+AGG - chr3_4:44434651-44434670 None:intergenic 55.0%
ACAGATGCACGACTCGATGC+AGG - chr3_4:44435225-44435244 None:intergenic 55.0%
TGAAGGTGGGAGGGTGAGGA+TGG + chr3_4:44429252-44429271 Msa0502330:CDS 60.0%
TGCAGCTAGCCAGCTAGGGA+TGG + chr3_4:44431008-44431027 Msa0502330:intron 60.0%
GCTACCCCCTCTCCGATCTT+AGG - chr3_4:44432476-44432495 None:intergenic 60.0%
!! TGGTGGTGGGCCAAAGCTGA+TGG - chr3_4:44432804-44432823 None:intergenic 60.0%
AGAGACAGGGTTGCAGGCAG+AGG + chr3_4:44432860-44432879 Msa0502330:intron 60.0%
GAGACAGGGTTGCAGGCAGA+GGG + chr3_4:44432861-44432880 Msa0502330:intron 60.0%
!!! CTGAGGCCTTTTGGCTTGGG+AGG + chr3_4:44433161-44433180 Msa0502330:intron 60.0%
!! GTGTTTTCGAGCCGCGGCGA+TGG + chr3_4:44429172-44429191 Msa0502330:CDS 65.0%
CTCCTCCTCTTCCATCGCCG+CGG - chr3_4:44429186-44429205 None:intergenic 65.0%
GCGGCGATGGAAGAGGAGGA+GGG + chr3_4:44429185-44429204 Msa0502330:CDS 65.0%
GCGATGGAAGAGGAGGAGGG+TGG + chr3_4:44429188-44429207 Msa0502330:CDS 65.0%
AGGTGGGAGGGTGAGGATGG+TGG + chr3_4:44429255-44429274 Msa0502330:CDS 65.0%
! TGGGAGGGTGAGGATGGTGG+TGG + chr3_4:44429258-44429277 Msa0502330:CDS 65.0%
!! GGGTGAGGATGGTGGTGGAG+AGG + chr3_4:44429263-44429282 Msa0502330:CDS 65.0%
TGGCCCACCACCAGAAGCCA+TGG + chr3_4:44432811-44432830 Msa0502330:intron 65.0%
CGGCCATGGCTTCTGGTGGT+GGG - chr3_4:44432817-44432836 None:intergenic 65.0%
TCTCATCTGGCACGCGGCCA+TGG - chr3_4:44432831-44432850 None:intergenic 65.0%
TCGAGCCGCGGCGATGGAAG+AGG + chr3_4:44429178-44429197 Msa0502330:CDS 70.0%
AGCCGCGGCGATGGAAGAGG+AGG + chr3_4:44429181-44429200 Msa0502330:CDS 70.0%
CGCGGCGATGGAAGAGGAGG+AGG + chr3_4:44429184-44429203 Msa0502330:CDS 70.0%
GCGGCCATGGCTTCTGGTGG+TGG - chr3_4:44432818-44432837 None:intergenic 70.0%
CACGCGGCCATGGCTTCTGG+TGG - chr3_4:44432821-44432840 None:intergenic 70.0%
TGGCACGCGGCCATGGCTTC+TGG - chr3_4:44432824-44432843 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 44428777 44435251 44428777 ID=Msa0502330;Name=Msa0502330
chr3_4 mRNA 44428777 44435251 44428777 ID=Msa0502330-mRNA-1;Parent=Msa0502330;Name=Msa0502330-mRNA-1;_AED=0.00;_eAED=0.00;_QI=98|1|1|1|1|1|3|528|511
chr3_4 exon 44428777 44429534 44428777 ID=Msa0502330-mRNA-1:exon:9481;Parent=Msa0502330-mRNA-1
chr3_4 exon 44431972 44432121 44431972 ID=Msa0502330-mRNA-1:exon:9482;Parent=Msa0502330-mRNA-1
chr3_4 exon 44433998 44435251 44433998 ID=Msa0502330-mRNA-1:exon:9483;Parent=Msa0502330-mRNA-1
chr3_4 five_prime_UTR 44428777 44428874 44428777 ID=Msa0502330-mRNA-1:five_prime_utr;Parent=Msa0502330-mRNA-1
chr3_4 CDS 44428875 44429534 44428875 ID=Msa0502330-mRNA-1:cds;Parent=Msa0502330-mRNA-1
chr3_4 CDS 44431972 44432121 44431972 ID=Msa0502330-mRNA-1:cds;Parent=Msa0502330-mRNA-1
chr3_4 CDS 44433998 44434723 44433998 ID=Msa0502330-mRNA-1:cds;Parent=Msa0502330-mRNA-1
chr3_4 three_prime_UTR 44434724 44435251 44434724 ID=Msa0502330-mRNA-1:three_prime_utr;Parent=Msa0502330-mRNA-1
Gene Sequence

>Msa0502330

ATGAACAAGAAGGTTCAGATCCTACTATTCCTTTTCATCTTCAACTCCTTCTCTCTCTGTCTTTACTTCATACACCACCCTTCTTTTCTCAACCCTACACCATCACCAAATCCTGACATCAAAATTTTCACTAAAGATTCACCTTTTCGACGACCCTTTATAGAGAAACACAAAACCCATATCTTAAAACCATGGCCAATTCTACCTTCATATTCACCATGGTCACAACCTTCAAATTCAACTCCACTACGGTCATGTGAGGGTTATTTTGGTAATGGATTCACGCGCTTGGTTGATGTGTTTTCGAGCCGCGGCGATGGAAGAGGAGGAGGGTGGTTTAGGTGTTGGTATAGTGAGACATTGAGGAGTTCAGTTTGTGAAGGTGGGAGGGTGAGGATGGTGGTGGAGAGGATAAAAATGGCAAAGGGTGGTGAGAGTTTGGGTGATGTTATTGGAAGAAGTGAAGATGAGGAGTTGCCTTTGTTTGAGGATGGTGCTTTTGAGGTTGATGGTGGTGTAGGGTTTGAAAGGGGGAAGATGGTTGTTGATGAGGGGTTTTTGGATAGGTATGTTCCTAGAGGGGAGATTATGAGACATACTATGCGTGATTTGATTGGTAAGATGAAGGTTGTTGGAAGGAAAGAATTTAATTGTGATAAGTGGATTGAGGAACCAACACTTCTGGTGACACGCTTTGAATATGCTAATCTATTTCACACTGTTACAGACTGGTACAGTGCATATGTTTCTTCTAGAGTTACTGGCTTGCCTAATCGACCTCATTTGATCTTTGTAGATGGACACTGTAAGGCTCCACTTGAAGAGACATGGAAAGCGCTATTCTCAAGCGTCAGATATGCTAAAAACTTCACCGGAACAGTATGTTTTCGTCATGCTATTCTCTCACCTTTGGGATATGAGACTGCTCTCTTTAAAGGGCTAACGGAAGATATATTTTGCAACGGAGCTTCTGCACAAGAATTGTGGCGAAAACCCGATAACGAAAAAACTGCACGTATTTCTGAGTTTGGAGAAATGATTAGGGCATCATTTGGACTACCTTTAAACTTACACCATGTTGGAAAACCAGTCTCTGGAGGACATAATGTCCTGTTTGTTCGTCGTGAAGATTATTTAGCTCATCCACGTCACGGTGGAAAAGTTGAATCAAGACTAAGTAACGAGGCAGAAGTGTTTGAATCCTTGAACAATTGGGCGTCTAATTACAAAGGGTGTAAAATCAACCTTGTCAACGGATTGTTCGCACACATGTCTATGAAGGAACAGGTACGGGCAATTCAAGATGCATCTGTGATCATTGGTGCACATGGTGCTGGTCTTACTCACATAGTATCTGCATTGCCTAAAACTGTGATTCTAGAGATTATTAGCAGCCAGTTCAGGCGTCCACATTTTGCGTACATTGCACGATGGAAAGGGTTGGAGTATCATGCAATTAACCTTGACGGGTCGTATGCCAATCCTGAAACTGTGATCAATGCGCTGGTCAGCATAATGAAAAGCCTTCGATGTTGA
Protein sequence

>Msa0502330

MNKKVQILLFLFIFNSFSLCLYFIHHPSFLNPTPSPNPDIKIFTKDSPFRRPFIEKHKTHILKPWPILPSYSPWSQPSNSTPLRSCEGYFGNGFTRLVDVFSSRGDGRGGGWFRCWYSETLRSSVCEGGRVRMVVERIKMAKGGESLGDVIGRSEDEELPLFEDGAFEVDGGVGFERGKMVVDEGFLDRYVPRGEIMRHTMRDLIGKMKVVGRKEFNCDKWIEEPTLLVTRFEYANLFHTVTDWYSAYVSSRVTGLPNRPHLIFVDGHCKAPLEETWKALFSSVRYAKNFTGTVCFRHAILSPLGYETALFKGLTEDIFCNGASAQELWRKPDNEKTARISEFGEMIRASFGLPLNLHHVGKPVSGGHNVLFVRREDYLAHPRHGGKVESRLSNEAEVFESLNNWASNYKGCKINLVNGLFAHMSMKEQVRAIQDASVIIGAHGAGLTHIVSALPKTVILEIISSQFRRPHFAYIARWKGLEYHAINLDGSYANPETVINALVSIMKSLRC*