AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1299950


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1299950 MtrunA17_Chr4g0061421 97.031 640 15 3 1 636 1 640 0.0 1252
Msa1299950 MtrunA17_Chr3g0113421 62.500 152 19 3 480 629 9 124 3.18e-30 115
Msa1299950 MtrunA17_Chr7g0269901 31.224 237 111 10 9 230 97 296 1.21e-16 84.0
Msa1299950 MtrunA17_Chr3g0142871 31.224 237 111 10 9 230 97 296 1.52e-16 83.6
Msa1299950 MtrunA17_Chr7g0271891 45.588 68 37 0 8 75 16 83 1.85e-15 74.3
Msa1299950 MtrunA17_Chr8g0344721 53.731 67 29 1 10 74 12 78 4.12e-14 72.4
Msa1299950 MtrunA17_Chr4g0044331 50.000 62 31 0 14 75 18 79 4.85e-13 67.4
Msa1299950 MtrunA17_Chr1g0209551 34.899 149 79 5 2 149 10 141 4.46e-12 68.6
Msa1299950 MtrunA17_Chr6g0460381 50.000 64 31 1 9 71 4 67 3.03e-11 63.2
Msa1299950 MtrunA17_Chr2g0333221 38.462 104 56 2 9 109 71 169 6.89e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1299950 AT1G74250.1 48.988 692 235 16 1 636 1 630 2.12e-178 521
Msa1299950 AT3G11450.1 28.099 242 126 7 2 230 93 299 6.58e-15 78.6
Msa1299950 AT3G14200.1 53.846 65 29 1 10 74 14 77 3.07e-13 70.1
Msa1299950 AT1G56300.2 38.356 73 45 0 2 74 7 79 1.10e-12 65.5
Msa1299950 AT1G56300.1 38.356 73 45 0 2 74 7 79 1.52e-12 66.2
Msa1299950 AT1G71000.2 41.892 74 43 0 1 74 1 74 8.86e-12 64.3
Msa1299950 AT1G71000.1 41.892 74 43 0 1 74 1 74 9.14e-12 64.3
Msa1299950 AT5G25530.2 35.345 116 59 5 9 112 5 116 1.31e-11 67.0
Msa1299950 AT5G06110.1 28.185 259 120 10 9 251 101 309 3.57e-11 66.6
Msa1299950 AT5G06110.2 28.185 259 120 10 9 251 101 309 3.57e-11 66.6
Msa1299950 AT1G59980.2 44.595 74 37 1 6 79 21 90 9.16e-11 64.3
Msa1299950 AT1G59980.1 44.595 74 37 1 6 79 21 90 9.91e-11 64.7

Find 184 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTCCTCTTATGGGGAATT+TGG 0.141158 8_3:+61334063 Msa1299950:CDS
TGTTGCTTCGATAAACAATT+AGG 0.166260 8_3:-61333603 None:intergenic
ACGGAATTAGACTTTGAATT+TGG 0.172659 8_3:-61333878 None:intergenic
CGAAGCCACCGCTCAGTTTC+AGG 0.199966 8_3:+61333769 Msa1299950:CDS
TTCCATTTCACCATTGTTTC+CGG 0.225938 8_3:-61336350 None:intergenic
ATATGCGACTACTTCAATTT+TGG 0.237735 8_3:+61336071 Msa1299950:three_prime_UTR
TATGAAGGTGAAGAAGAATT+TGG 0.247762 8_3:+61334318 Msa1299950:CDS
TTGCTAAGAAATTAGGTTTA+GGG 0.251194 8_3:+61334023 Msa1299950:CDS
TGTTAGACAGGCTCCTCTTA+TGG 0.265835 8_3:+61334054 Msa1299950:CDS
GGCGTTGGAGAGCGAGTTTC+CGG 0.265860 8_3:-61333709 None:intergenic
TTTGCTAAGAAATTAGGTTT+AGG 0.269838 8_3:+61334022 Msa1299950:CDS
TGGCGTTGGGGTTGATGATT+TGG 0.280098 8_3:+61334702 Msa1299950:CDS
GGGTGAGATCTATTGAAATT+TGG 0.291732 8_3:-61336203 None:intergenic
TGATGTGTTTGATAAAATTC+AGG 0.297358 8_3:+61333985 Msa1299950:CDS
AATTGAAGTAGTCGCATATC+TGG 0.303758 8_3:-61336067 None:intergenic
GAGAAGAATGTAATCAATAT+TGG 0.312751 8_3:+61335216 Msa1299950:CDS
GTTCTTGAAACAATGGTATC+TGG 0.319682 8_3:+61334895 Msa1299950:CDS
TTCCGGTAAGGGTTTCTATA+AGG 0.322734 8_3:+61333955 Msa1299950:CDS
GTTGCTTCGATAAACAATTA+GGG 0.333342 8_3:-61333602 None:intergenic
GATGTTGATGATGATGAAAT+TGG 0.336996 8_3:+61334964 Msa1299950:CDS
CCTGATTTGACGAGCTTGTC+AGG 0.337742 8_3:-61333734 None:intergenic
TGTTTAGATATCTAATGTTA+TGG 0.351979 8_3:+61336277 Msa1299950:three_prime_UTR
GTTAGACAGGCTCCTCTTAT+GGG 0.353059 8_3:+61334055 Msa1299950:CDS
ATGTCTATGAAAATAGTTTA+CGG 0.353143 8_3:+61336394 Msa1299950:three_prime_UTR
TTCTTGAATTAGAGAAATCT+TGG 0.357865 8_3:+61335789 Msa1299950:intron
AACCTCCGCGACTTCCTATT+CGG 0.359713 8_3:-61334187 None:intergenic
GTTCATAAGGGTATGGATAC+AGG 0.366618 8_3:+61336174 Msa1299950:three_prime_UTR
AAGAACTCCGATCAGCTTAC+CGG 0.367180 8_3:+61333690 Msa1299950:CDS
GGGCTTGTGTGTTGAAGCAC+TGG 0.368221 8_3:-61335028 None:intergenic
GATGGAGGAAGAGAATAATA+AGG 0.374112 8_3:+61334210 Msa1299950:CDS
TAGGAAGTCGCGGAGGTTGA+TGG 0.374440 8_3:+61334192 Msa1299950:CDS
CTTCTGTCGTCGTCAACCTC+AGG 0.376304 8_3:+61333540 Msa1299950:five_prime_UTR
ATGTTGATGATGATGAAATT+GGG 0.378497 8_3:+61334965 Msa1299950:CDS
CCTGACAAGCTCGTCAAATC+AGG 0.380161 8_3:+61333734 Msa1299950:CDS
TAAGCTGATCGGAGTTCTTC+CGG 0.384438 8_3:-61333686 None:intergenic
TCATCAACCTTAGCCCAATC+AGG 0.385687 8_3:-61334427 None:intergenic
CTGAAACTGAGCGGTGGCTT+CGG 0.388334 8_3:-61333768 None:intergenic
GAAGGAGAGGAAGAGGAAGT+TGG 0.396116 8_3:+61334366 Msa1299950:CDS
AGGAGGAGAAGGAGAGGAAG+AGG 0.399336 8_3:+61334359 Msa1299950:CDS
TCGTACCAAGCTCGTTCCTT+TGG 0.399711 8_3:-61333824 None:intergenic
TATTTATGCCACAGTTCATA+AGG 0.401824 8_3:+61336161 Msa1299950:three_prime_UTR
GAAGAAGATTTCAAATCAAC+CGG 0.408421 8_3:+61335335 Msa1299950:CDS
TGGCTTATGAGGAGCCTGAT+TGG 0.409460 8_3:+61334413 Msa1299950:CDS
GAAACTAATGTGCCTACTAA+TGG 0.414627 8_3:+61335186 Msa1299950:CDS
AAAGTGAGGAGGATGGCGTT+GGG 0.416761 8_3:+61334689 Msa1299950:CDS
GGTGAGGAGGAAGGCGAAGA+GGG 0.422169 8_3:+61334231 Msa1299950:CDS
TTCCGGAAACAATGGTGAAA+TGG 0.422367 8_3:+61336348 Msa1299950:three_prime_UTR
TAAGAGAGTGATTGATATGA+AGG 0.428180 8_3:+61334303 Msa1299950:CDS
TTCTCACTCTCAATTTGAGT+TGG 0.428513 8_3:-61335066 None:intergenic
GGAGAAAGTTGCTGAGTTCA+AGG 0.429185 8_3:+61334585 Msa1299950:CDS
ATCCGAAAACCCCGAAAATA+CGG 0.430044 8_3:-61333933 None:intergenic
TAGTCCTTATGCGCAGGTTA+CGG 0.433863 8_3:+61334087 Msa1299950:CDS
AGGGATTGATTCTGTTAGAC+AGG 0.434136 8_3:+61334042 Msa1299950:CDS
GAAGTTGGAGATGGAGAGGA+AGG 0.434700 8_3:+61334381 Msa1299950:CDS
TTCGAGGAAAATGAGGATAA+TGG 0.435391 8_3:+61335279 Msa1299950:CDS
GCAGAAGACGAGAGTGCAAA+TGG 0.435707 8_3:+61334754 Msa1299950:CDS
GGAGAGGGCTATGGCTTATG+AGG 0.439385 8_3:+61334402 Msa1299950:CDS
AAAGCCGTAACCTGCGCATA+AGG 0.439715 8_3:-61334091 None:intergenic
TAAATTGTAGCTCAGCCTTC+CGG 0.440662 8_3:+61336126 Msa1299950:three_prime_UTR
AGAAGTTGAGGATTTGTATG+AGG 0.441764 8_3:+61334453 Msa1299950:CDS
AACCTTATAGAAACCCTTAC+CGG 0.442360 8_3:-61333957 None:intergenic
CGATGCCACTACGAAGTTCT+CGG 0.443193 8_3:+61333644 Msa1299950:CDS
GGCTTATGAGGAGCCTGATT+GGG 0.449241 8_3:+61334414 Msa1299950:CDS
GAAGAAGAAAGAGGAGGAGA+AGG 0.462080 8_3:+61334348 Msa1299950:CDS
TTCTCATATTTGCCATTAGT+AGG 0.462771 8_3:-61335198 None:intergenic
TGGTATCTGGGCACAAGGGC+CGG 0.463969 8_3:+61334908 Msa1299950:CDS
CGAGCTTGTCAGGGTGGCGT+TGG 0.466381 8_3:-61333724 None:intergenic
AGTTTAAGAGTGAGAAGCAA+TGG 0.469035 8_3:+61334533 Msa1299950:CDS
GAAGGTGAAAGTGAAGGGGT+TGG 0.476024 8_3:+61334652 Msa1299950:CDS
CTATCCAAATTCCCCATAAG+AGG 0.477965 8_3:-61334067 None:intergenic
GAATGATGGGGTTGGTGCTA+TGG 0.478029 8_3:+61335092 Msa1299950:CDS
GTCTAGTTCCCAATATTTCG+AGG 0.480169 8_3:+61335263 Msa1299950:CDS
CCAATATTTCGAGGAAAATG+AGG 0.482316 8_3:+61335272 Msa1299950:CDS
GTTCTTGAAGCAATGCTGGC+TGG 0.482368 8_3:+61334988 Msa1299950:CDS
TGGGGTTCTTGAAGCAATGC+TGG 0.483544 8_3:+61334984 Msa1299950:CDS
GAGGAAGAGGAAGTTGGAGA+TGG 0.484765 8_3:+61334372 Msa1299950:CDS
GAAAGTGAGGAGGATGGCGT+TGG 0.484850 8_3:+61334688 Msa1299950:CDS
ATTTATGCCACAGTTCATAA+GGG 0.489773 8_3:+61336162 Msa1299950:three_prime_UTR
GAATAATAAGGTGAGGAGGA+AGG 0.491971 8_3:+61334222 Msa1299950:CDS
CATAAACATCTGAGCGACTC+TGG 0.492233 8_3:+61335963 Msa1299950:CDS
TGCCACAGTTCATAAGGGTA+TGG 0.496764 8_3:+61336167 Msa1299950:three_prime_UTR
AGTTGGAGTTTCAGAAGCCT+CGG 0.497718 8_3:-61335049 None:intergenic
TCATTGTCACCATCATCATT+CGG 0.500186 8_3:-61334784 None:intergenic
GGCTTGTGTGTTGAAGCACT+GGG 0.501875 8_3:-61335027 None:intergenic
CAGAAGACGAGAGTGCAAAT+GGG 0.506677 8_3:+61334755 Msa1299950:CDS
AGAAAGAGGAGGAGAAGGAG+AGG 0.506886 8_3:+61334353 Msa1299950:CDS
AGAGGAAGTTGGAGATGGAG+AGG 0.510470 8_3:+61334377 Msa1299950:CDS
GCAATGGAATCGAGATCTAT+CGG 0.514559 8_3:+61336420 Msa1299950:three_prime_UTR
AAAATCTGTAATAAGAGTAT+TGG 0.516505 8_3:+61336486 Msa1299950:three_prime_UTR
ACGAGGAAGGTGAAAGTGAA+GGG 0.517150 8_3:+61334647 Msa1299950:CDS
TGTAATAAGAGTATTGGTAC+TGG 0.520881 8_3:+61336492 Msa1299950:three_prime_UTR
GACGAGGAAGGTGAAAGTGA+AGG 0.520922 8_3:+61334646 Msa1299950:CDS
GCAGCAATGAAAAGTCGATA+AGG 0.521221 8_3:+61335990 Msa1299950:CDS
GAGAGTGAGAATGAGAATGA+TGG 0.521962 8_3:+61335078 Msa1299950:CDS
GTTTGAGAAGAAAGATGAGA+AGG 0.522115 8_3:+61334483 Msa1299950:CDS
TGGATCGGAGAGTACCTCAT+AGG 0.522444 8_3:-61333804 None:intergenic
TGAGCAGAGTAAGAAGCATA+AGG 0.522481 8_3:+61334564 Msa1299950:CDS
TGGAGATGGAGAGGAAGGAG+AGG 0.522737 8_3:+61334386 Msa1299950:CDS
GGTTGATGAAGAAGAAGTTG+AGG 0.524241 8_3:+61334441 Msa1299950:CDS
CGAAGCAACAATGGCATCGA+CGG 0.524518 8_3:+61333616 Msa1299950:exon
TTCTGTCGTCGTCAACCTCA+GGG 0.524893 8_3:+61333541 Msa1299950:five_prime_UTR
CATTCTCATCAAAATCAAAC+CGG 0.526287 8_3:-61334927 None:intergenic
ATAAATAACATGCTTTCTGC+CGG 0.530799 8_3:-61336145 None:intergenic
CGAGTTTCCGGTAAGCTGAT+CGG 0.532549 8_3:-61333697 None:intergenic
TCGATAAGGAAAATATACTA+AGG 0.533085 8_3:+61336004 Msa1299950:exon
ATTAGACTTTGAATTTGGAT+CGG 0.533157 8_3:-61333873 None:intergenic
TGAGGAGCCTGATTGGGCTA+AGG 0.533690 8_3:+61334420 Msa1299950:CDS
AGGTGAGGAGGAAGGCGAAG+AGG 0.534213 8_3:+61334230 Msa1299950:CDS
TTCTTGAAACAATGGTATCT+GGG 0.534518 8_3:+61334896 Msa1299950:CDS
GGTGAAGAAGAATTTGGAGA+TGG 0.534575 8_3:+61334324 Msa1299950:CDS
AGAGTGAGAATGAGAATGAT+GGG 0.534818 8_3:+61335079 Msa1299950:CDS
AGAGGAAAGATTAGAAAGTG+AGG 0.536511 8_3:+61334675 Msa1299950:CDS
GGAGAGGAAGGAGAGGGCTA+TGG 0.537823 8_3:+61334393 Msa1299950:CDS
AGAGGAGTTAGAAGCTGAAG+TGG 0.540411 8_3:+61334624 Msa1299950:CDS
GGAGATGGAGAAGAAGAAAG+AGG 0.547787 8_3:+61334339 Msa1299950:CDS
TTGAATTTGGATCGGAGAAG+AGG 0.548637 8_3:-61333865 None:intergenic
AATGTAATCAATATTGGAGA+TGG 0.550622 8_3:+61335222 Msa1299950:CDS
GATGAGTATGATGCGATGGC+AGG 0.551327 8_3:+61334163 Msa1299950:CDS
CAATGGAATCGAGATCTATC+GGG 0.552754 8_3:+61336421 Msa1299950:three_prime_UTR
GGAGATGGAGAGGAAGGAGA+GGG 0.552905 8_3:+61334387 Msa1299950:CDS
AGATTAGAAAGTGAGGAGGA+TGG 0.553099 8_3:+61334682 Msa1299950:CDS
GAAGAGGATTTGAGAACGAT+GGG 0.554440 8_3:-61333849 None:intergenic
CCAAGCTCGTTCCTTTGGAT+CGG 0.555573 8_3:-61333819 None:intergenic
CGATGATGTTCTTGAAACAA+TGG 0.555739 8_3:+61334888 Msa1299950:CDS
TGAAAGTGAAGGGGTTGGAG+AGG 0.556578 8_3:+61334657 Msa1299950:CDS
GTTGGAGTTTCAGAAGCCTC+GGG 0.557564 8_3:-61335048 None:intergenic
AGAAGAGGATTTGAGAACGA+TGG 0.558151 8_3:-61333850 None:intergenic
CCGATCCAAAGGAACGAGCT+TGG 0.558363 8_3:+61333819 Msa1299950:CDS
AAATAGTTTACGGATGGCAA+TGG 0.559656 8_3:+61336404 Msa1299950:three_prime_UTR
GTTAGAAGCTGAAGTGGACG+AGG 0.565424 8_3:+61334630 Msa1299950:CDS
CGAAAACAGGTCAGGGACAA+CGG 0.566006 8_3:-61333897 None:intergenic
TTTGGATAGTCCTTATGCGC+AGG 0.567782 8_3:+61334081 Msa1299950:CDS
GAGCAAAGAAAGAGAAGGGT+GGG 0.568242 8_3:+61335151 Msa1299950:CDS
AACAATGGTATCTGGGCACA+AGG 0.568483 8_3:+61334903 Msa1299950:CDS
AAGAGAATAATAAGGTGAGG+AGG 0.569009 8_3:+61334218 Msa1299950:CDS
TCTACCTCGCGAATGCTCAC+CGG 0.571563 8_3:+61333667 Msa1299950:CDS
CTGATTTGACGAGCTTGTCA+GGG 0.572375 8_3:-61333733 None:intergenic
GGATTCACTTGATGATGAAG+AGG 0.574101 8_3:+61334606 Msa1299950:CDS
GGAGCTACAACACGCCTATG+AGG 0.575033 8_3:+61333790 Msa1299950:CDS
CGGTGGCTTCGGATTGAGAG+AGG 0.580013 8_3:-61333757 None:intergenic
AAATGTTATCTGACAGAGAG+AGG 0.581739 8_3:-61336224 None:intergenic
GGAAAGATTAGAAAGTGAGG+AGG 0.583975 8_3:+61334678 Msa1299950:CDS
ACGTAGAGCAAAGAAAGAGA+AGG 0.595059 8_3:+61335146 Msa1299950:CDS
CTATGAAAATAGTTTACGGA+TGG 0.596236 8_3:+61336398 Msa1299950:three_prime_UTR
GGGGTTGAGCCGAATGATGA+TGG 0.597019 8_3:+61334775 Msa1299950:CDS
ATAACATGCTTTCTGCCGGA+AGG 0.598055 8_3:-61336141 None:intergenic
TGAGGTACTCTCCGATCCAA+AGG 0.600261 8_3:+61333808 Msa1299950:CDS
AGGAAGAGAATAATAAGGTG+AGG 0.601773 8_3:+61334215 Msa1299950:CDS
AAGTGAGGAGGATGGCGTTG+GGG 0.606066 8_3:+61334690 Msa1299950:CDS
ATTTCAAATATATCATCGAG+TGG 0.606505 8_3:+61336034 Msa1299950:three_prime_UTR
CGGTAAAGAGAATGAGCAGG+TGG 0.606870 8_3:+61335302 Msa1299950:CDS
TTCATAAGGGTATGGATACA+GGG 0.609063 8_3:+61336175 Msa1299950:three_prime_UTR
GGCGGATGAGTATGATGCGA+TGG 0.610486 8_3:+61334159 Msa1299950:CDS
CGAGGAAGGTGAAAGTGAAG+GGG 0.611247 8_3:+61334648 Msa1299950:CDS
TTAGACAGGCTCCTCTTATG+GGG 0.611836 8_3:+61334056 Msa1299950:CDS
TAATGATACTGTGAGAAAGT+TGG 0.612128 8_3:+61334258 Msa1299950:CDS
TGGCGGTAAAGAGAATGAGC+AGG 0.613961 8_3:+61335299 Msa1299950:CDS
GAAGCTGAAGTGGACGAGGA+AGG 0.614178 8_3:+61334634 Msa1299950:CDS
ATTGTTTATCGAAGCAACAA+TGG 0.617119 8_3:+61333607 Msa1299950:exon
CGTAGAGCAAAGAAAGAGAA+GGG 0.619612 8_3:+61335147 Msa1299950:CDS
TGTTGATGATGATGAAATTG+GGG 0.621284 8_3:+61334966 Msa1299950:CDS
AGTAGTCGCATATCTGGACC+TGG 0.632829 8_3:-61336061 None:intergenic
GAGAATGAGAATGATGGGGT+TGG 0.635119 8_3:+61335084 Msa1299950:CDS
GTGAGCAGGAGTTTGAGTCA+AGG 0.636045 8_3:+61335829 Msa1299950:CDS
ATTTGACGAGCTTGTCAGGG+TGG 0.643119 8_3:-61333730 None:intergenic
GATGGAGAAGAAGAAAGAGG+AGG 0.648465 8_3:+61334342 Msa1299950:CDS
AATGTTATCTGACAGAGAGA+GGG 0.649157 8_3:-61336223 None:intergenic
AGAAGACGAGAGTGCAAATG+GGG 0.651811 8_3:+61334756 Msa1299950:CDS
TGCTGAGCATGCAGAAGATG+AGG 0.654863 8_3:+61334819 Msa1299950:CDS
AGAGCAAAGAAAGAGAAGGG+TGG 0.655964 8_3:+61335150 Msa1299950:CDS
ATCCATACCCTTATGAACTG+TGG 0.656114 8_3:-61336169 None:intergenic
TGCTTCAACACACAAGCCCG+AGG 0.660773 8_3:+61335032 Msa1299950:CDS
TAGCTCCTGAAACTGAGCGG+TGG 0.662261 8_3:-61333774 None:intergenic
CAGGTCCGAATAGGAAGTCG+CGG 0.662770 8_3:+61334182 Msa1299950:CDS
GAAGTCGCGGAGGTTGATGG+AGG 0.669800 8_3:+61334195 Msa1299950:CDS
AGATCAAAACTTTCAACCAG+AGG 0.672866 8_3:+61335393 Msa1299950:CDS
ACAATGGTATCTGGGCACAA+GGG 0.680825 8_3:+61334904 Msa1299950:CDS
TCTTCCGGTGAGCATTCGCG+AGG 0.687306 8_3:-61333671 None:intergenic
GGTAAAGAGAATGAGCAGGT+GGG 0.690040 8_3:+61335303 Msa1299950:CDS
GAGGAAAATGAGGATAATGG+CGG 0.690575 8_3:+61335282 Msa1299950:CDS
GAGTGAGAATGAGAATGATG+GGG 0.711594 8_3:+61335080 Msa1299950:CDS
GTCCGAATAGGAAGTCGCGG+AGG 0.733839 8_3:+61334185 Msa1299950:CDS
GTAGACCGAGAACTTCGTAG+TGG 0.735555 8_3:-61333649 None:intergenic
TTGTAGCTCCTGAAACTGAG+CGG 0.736164 8_3:-61333777 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATTTTGCTAAGAAATT+AGG + chr8_3:61334016-61334035 Msa1299950:CDS 15.0%
!! TATTCATAAAAACATACATT+TGG - chr8_3:61335426-61335445 None:intergenic 15.0%
!!! TTAATTTTGATGAAATTAAG+AGG + chr8_3:61335595-61335614 Msa1299950:intron 15.0%
!!! ATTAATAGCAACTATTTTTT+GGG - chr8_3:61336460-61336479 None:intergenic 15.0%
!!! TATTAATAGCAACTATTTTT+TGG - chr8_3:61336461-61336480 None:intergenic 15.0%
!!! AAAAAATAGTTGCTATTAAT+AGG + chr8_3:61336460-61336479 Msa1299950:three_prime_UTR 15.0%
!!! AAAAATAGTTGCTATTAATA+GGG + chr8_3:61336461-61336480 Msa1299950:three_prime_UTR 15.0%
!! AAAAAATTGGAAGTAAAACA+AGG - chr8_3:61335558-61335577 None:intergenic 20.0%
!! ACTTAGTAAAGCAAAAAAAT+TGG - chr8_3:61335571-61335590 None:intergenic 20.0%
!! CAGAATAATAAACAAGAAAA+TGG - chr8_3:61335647-61335666 None:intergenic 20.0%
!!! TTTTCTTGTTTATTATTCTG+TGG + chr8_3:61335647-61335666 Msa1299950:intron 20.0%
!!! CTTTGTTTTATTTTATTCTC+AGG + chr8_3:61335931-61335950 Msa1299950:intron 20.0%
!! CTGTAGTAAAAATTAAAGAA+TGG - chr8_3:61336098-61336117 None:intergenic 20.0%
!! TGTTTAGATATCTAATGTTA+TGG + chr8_3:61336277-61336296 Msa1299950:three_prime_UTR 20.0%
!! ATGTCTATGAAAATAGTTTA+CGG + chr8_3:61336394-61336413 Msa1299950:three_prime_UTR 20.0%
!!! AAAATCTGTAATAAGAGTAT+TGG + chr8_3:61336486-61336505 Msa1299950:three_prime_UTR 20.0%
! ATTAGACTTTGAATTTGGAT+CGG - chr8_3:61333876-61333895 None:intergenic 25.0%
! TGATGTGTTTGATAAAATTC+AGG + chr8_3:61333985-61334004 Msa1299950:CDS 25.0%
! TTTGCTAAGAAATTAGGTTT+AGG + chr8_3:61334022-61334041 Msa1299950:CDS 25.0%
! TTGCTAAGAAATTAGGTTTA+GGG + chr8_3:61334023-61334042 Msa1299950:CDS 25.0%
!! TTACGGCTTTTTATAGTTAT+TGG + chr8_3:61334104-61334123 Msa1299950:CDS 25.0%
!!! GCTTTTTATAGTTATTGGTT+GGG + chr8_3:61334109-61334128 Msa1299950:CDS 25.0%
!!! TTTGATTTTGATGAGAATGA+TGG + chr8_3:61334931-61334950 Msa1299950:CDS 25.0%
!!! ATGTTGATGATGATGAAATT+GGG + chr8_3:61334965-61334984 Msa1299950:CDS 25.0%
! GAGAAGAATGTAATCAATAT+TGG + chr8_3:61335216-61335235 Msa1299950:CDS 25.0%
! AATGTAATCAATATTGGAGA+TGG + chr8_3:61335222-61335241 Msa1299950:CDS 25.0%
!!! TTTTTTTGCTTTACTAAGTG+TGG + chr8_3:61335572-61335591 Msa1299950:intron 25.0%
!! TTTTTAAATTCACACATGTG+AGG + chr8_3:61335672-61335691 Msa1299950:intron 25.0%
! TTCTTGAATTAGAGAAATCT+TGG + chr8_3:61335789-61335808 Msa1299950:intron 25.0%
! TTGAAATTTGATGAGTAAGA+GGG - chr8_3:61335865-61335884 None:intergenic 25.0%
! TCGATAAGGAAAATATACTA+AGG + chr8_3:61336004-61336023 Msa1299950:exon 25.0%
! ATTTCAAATATATCATCGAG+TGG + chr8_3:61336034-61336053 Msa1299950:three_prime_UTR 25.0%
!!! TCTAAACACATGTTTTGTTT+GGG - chr8_3:61336265-61336284 None:intergenic 25.0%
!!! ATCTAAACACATGTTTTGTT+TGG - chr8_3:61336266-61336285 None:intergenic 25.0%
GTTGCTTCGATAAACAATTA+GGG - chr8_3:61333605-61333624 None:intergenic 30.0%
! TGTTGCTTCGATAAACAATT+AGG - chr8_3:61333606-61333625 None:intergenic 30.0%
ATTGTTTATCGAAGCAACAA+TGG + chr8_3:61333607-61333626 Msa1299950:exon 30.0%
ACGGAATTAGACTTTGAATT+TGG - chr8_3:61333881-61333900 None:intergenic 30.0%
TATTCGAGAAAAACGAAAAC+AGG - chr8_3:61333913-61333932 None:intergenic 30.0%
! TTTCTCGAATACCGTATTTT+CGG + chr8_3:61333922-61333941 Msa1299950:CDS 30.0%
! GGCTTTTTATAGTTATTGGT+TGG + chr8_3:61334108-61334127 Msa1299950:CDS 30.0%
! GACTGTTATGGATTTTTGTT+GGG + chr8_3:61334138-61334157 Msa1299950:CDS 30.0%
TAATGATACTGTGAGAAAGT+TGG + chr8_3:61334258-61334277 Msa1299950:CDS 30.0%
TAAGAGAGTGATTGATATGA+AGG + chr8_3:61334303-61334322 Msa1299950:CDS 30.0%
TATGAAGGTGAAGAAGAATT+TGG + chr8_3:61334318-61334337 Msa1299950:CDS 30.0%
!!! AGTTTTATTGTGTGTTGTGT+GGG + chr8_3:61334506-61334525 Msa1299950:CDS 30.0%
TTCTTGAAACAATGGTATCT+GGG + chr8_3:61334896-61334915 Msa1299950:CDS 30.0%
CATTCTCATCAAAATCAAAC+CGG - chr8_3:61334930-61334949 None:intergenic 30.0%
!! GATGTTGATGATGATGAAAT+TGG + chr8_3:61334964-61334983 Msa1299950:CDS 30.0%
!! TGTTGATGATGATGAAATTG+GGG + chr8_3:61334966-61334985 Msa1299950:CDS 30.0%
!!! GTTTCTTTTTTGCAGGTTTT+CGG - chr8_3:61335128-61335147 None:intergenic 30.0%
TTCTCATATTTGCCATTAGT+AGG - chr8_3:61335201-61335220 None:intergenic 30.0%
! CTCATTTTCCTCGAAATATT+GGG - chr8_3:61335274-61335293 None:intergenic 30.0%
GAAGAAGATTTCAAATCAAC+CGG + chr8_3:61335335-61335354 Msa1299950:CDS 30.0%
!! AATCAACCGGTTGATAAAAA+AGG + chr8_3:61335348-61335367 Msa1299950:CDS 30.0%
!!! GAAGTTCCTTTTTTATCAAC+CGG - chr8_3:61335357-61335376 None:intergenic 30.0%
CAACAACAGTATATTAGAAC+AGG - chr8_3:61335508-61335527 None:intergenic 30.0%
CTGTTCTAATATACTGTTGT+TGG + chr8_3:61335506-61335525 Msa1299950:intron 30.0%
CTTGAAATTTGATGAGTAAG+AGG - chr8_3:61335866-61335885 None:intergenic 30.0%
TCATCATTGTTTATGTTGTG+AGG + chr8_3:61335892-61335911 Msa1299950:intron 30.0%
! ATATGCGACTACTTCAATTT+TGG + chr8_3:61336071-61336090 Msa1299950:three_prime_UTR 30.0%
ATAAATAACATGCTTTCTGC+CGG - chr8_3:61336148-61336167 None:intergenic 30.0%
TATTTATGCCACAGTTCATA+AGG + chr8_3:61336161-61336180 Msa1299950:three_prime_UTR 30.0%
ATTTATGCCACAGTTCATAA+GGG + chr8_3:61336162-61336181 Msa1299950:three_prime_UTR 30.0%
! ATGGAGTTCATTCTATTTTC+CGG + chr8_3:61336331-61336350 Msa1299950:three_prime_UTR 30.0%
! ATTCTATTTTCCGGAAACAA+TGG + chr8_3:61336340-61336359 Msa1299950:three_prime_UTR 30.0%
CTATGAAAATAGTTTACGGA+TGG + chr8_3:61336398-61336417 Msa1299950:three_prime_UTR 30.0%
!! TGTAATAAGAGTATTGGTAC+TGG + chr8_3:61336492-61336511 Msa1299950:three_prime_UTR 30.0%
! TTTTTCTCAAAGTTACCCTG+AGG - chr8_3:61333559-61333578 None:intergenic 35.0%
AGAAAAACGAAAACAGGTCA+GGG - chr8_3:61333907-61333926 None:intergenic 35.0%
! TTCTCGAATACCGTATTTTC+GGG + chr8_3:61333923-61333942 Msa1299950:CDS 35.0%
AACCTTATAGAAACCCTTAC+CGG - chr8_3:61333960-61333979 None:intergenic 35.0%
! CGACTGTTATGGATTTTTGT+TGG + chr8_3:61334137-61334156 Msa1299950:CDS 35.0%
! TGTTATGGATTTTTGTTGGG+CGG + chr8_3:61334141-61334160 Msa1299950:CDS 35.0%
GATGGAGGAAGAGAATAATA+AGG + chr8_3:61334210-61334229 Msa1299950:CDS 35.0%
AGGAAGAGAATAATAAGGTG+AGG + chr8_3:61334215-61334234 Msa1299950:CDS 35.0%
AAGAGAATAATAAGGTGAGG+AGG + chr8_3:61334218-61334237 Msa1299950:CDS 35.0%
AGAAGTTGAGGATTTGTATG+AGG + chr8_3:61334453-61334472 Msa1299950:CDS 35.0%
GTTTGAGAAGAAAGATGAGA+AGG + chr8_3:61334483-61334502 Msa1299950:CDS 35.0%
!!! GAGTTTTATTGTGTGTTGTG+TGG + chr8_3:61334505-61334524 Msa1299950:CDS 35.0%
AGTTTAAGAGTGAGAAGCAA+TGG + chr8_3:61334533-61334552 Msa1299950:CDS 35.0%
AGAGGAAAGATTAGAAAGTG+AGG + chr8_3:61334675-61334694 Msa1299950:CDS 35.0%
TCATTGTCACCATCATCATT+CGG - chr8_3:61334787-61334806 None:intergenic 35.0%
CGATGATGTTCTTGAAACAA+TGG + chr8_3:61334888-61334907 Msa1299950:CDS 35.0%
GTTCTTGAAACAATGGTATC+TGG + chr8_3:61334895-61334914 Msa1299950:CDS 35.0%
TTCTCACTCTCAATTTGAGT+TGG - chr8_3:61335069-61335088 None:intergenic 35.0%
AGAGTGAGAATGAGAATGAT+GGG + chr8_3:61335079-61335098 Msa1299950:CDS 35.0%
GAAACTAATGTGCCTACTAA+TGG + chr8_3:61335186-61335205 Msa1299950:CDS 35.0%
! CCTCATTTTCCTCGAAATAT+TGG - chr8_3:61335275-61335294 None:intergenic 35.0%
CCAATATTTCGAGGAAAATG+AGG + chr8_3:61335272-61335291 Msa1299950:CDS 35.0%
TTCGAGGAAAATGAGGATAA+TGG + chr8_3:61335279-61335298 Msa1299950:CDS 35.0%
!! CTGGTTGAAAGTTTTGATCT+GGG - chr8_3:61335393-61335412 None:intergenic 35.0%
!! TCTGGTTGAAAGTTTTGATC+TGG - chr8_3:61335394-61335413 None:intergenic 35.0%
AGATCAAAACTTTCAACCAG+AGG + chr8_3:61335393-61335412 Msa1299950:CDS 35.0%
!!! TACATTTGGTTTTCTTCCTC+TGG - chr8_3:61335412-61335431 None:intergenic 35.0%
CATACATATCTCAGTAGTCA+TGG - chr8_3:61335477-61335496 None:intergenic 35.0%
CTTCTGTTTAATGGAAGACA+TGG - chr8_3:61335731-61335750 None:intergenic 35.0%
GAAATCAGAATAGAGCAGAA+AGG - chr8_3:61335754-61335773 None:intergenic 35.0%
AAATTTGATGAGTAAGAGGG+AGG - chr8_3:61335862-61335881 None:intergenic 35.0%
AATTGAAGTAGTCGCATATC+TGG - chr8_3:61336070-61336089 None:intergenic 35.0%
! TTCATAAGGGTATGGATACA+GGG + chr8_3:61336175-61336194 Msa1299950:three_prime_UTR 35.0%
GGGTGAGATCTATTGAAATT+TGG - chr8_3:61336206-61336225 None:intergenic 35.0%
AATGTTATCTGACAGAGAGA+GGG - chr8_3:61336226-61336245 None:intergenic 35.0%
AAATGTTATCTGACAGAGAG+AGG - chr8_3:61336227-61336246 None:intergenic 35.0%
TTCCATTTCACCATTGTTTC+CGG - chr8_3:61336353-61336372 None:intergenic 35.0%
AAATAGTTTACGGATGGCAA+TGG + chr8_3:61336404-61336423 Msa1299950:three_prime_UTR 35.0%
GAAGAGGATTTGAGAACGAT+GGG - chr8_3:61333852-61333871 None:intergenic 40.0%
AGAAGAGGATTTGAGAACGA+TGG - chr8_3:61333853-61333872 None:intergenic 40.0%
TTGAATTTGGATCGGAGAAG+AGG - chr8_3:61333868-61333887 None:intergenic 40.0%
GAGAAAAACGAAAACAGGTC+AGG - chr8_3:61333908-61333927 None:intergenic 40.0%
! TCTCGAATACCGTATTTTCG+GGG + chr8_3:61333924-61333943 Msa1299950:CDS 40.0%
!! TACCGTATTTTCGGGGTTTT+CGG + chr8_3:61333931-61333950 Msa1299950:CDS 40.0%
ATCCGAAAACCCCGAAAATA+CGG - chr8_3:61333936-61333955 None:intergenic 40.0%
TTCCGGTAAGGGTTTCTATA+AGG + chr8_3:61333955-61333974 Msa1299950:CDS 40.0%
! AGGGATTGATTCTGTTAGAC+AGG + chr8_3:61334042-61334061 Msa1299950:CDS 40.0%
CTATCCAAATTCCCCATAAG+AGG - chr8_3:61334070-61334089 None:intergenic 40.0%
! GTTGGGATTTTCGACTGTTA+TGG + chr8_3:61334126-61334145 Msa1299950:CDS 40.0%
GAATAATAAGGTGAGGAGGA+AGG + chr8_3:61334222-61334241 Msa1299950:CDS 40.0%
!! TGGCTGATTTTGTGAAGAAG+AGG + chr8_3:61334278-61334297 Msa1299950:CDS 40.0%
!! GGCTGATTTTGTGAAGAAGA+GGG + chr8_3:61334279-61334298 Msa1299950:CDS 40.0%
GGTGAAGAAGAATTTGGAGA+TGG + chr8_3:61334324-61334343 Msa1299950:CDS 40.0%
!! GGTTGATGAAGAAGAAGTTG+AGG + chr8_3:61334441-61334460 Msa1299950:CDS 40.0%
! TGAGCAGAGTAAGAAGCATA+AGG + chr8_3:61334564-61334583 Msa1299950:CDS 40.0%
!! GGATTCACTTGATGATGAAG+AGG + chr8_3:61334606-61334625 Msa1299950:CDS 40.0%
GGAAAGATTAGAAAGTGAGG+AGG + chr8_3:61334678-61334697 Msa1299950:CDS 40.0%
AGATTAGAAAGTGAGGAGGA+TGG + chr8_3:61334682-61334701 Msa1299950:CDS 40.0%
GAGAGTGAGAATGAGAATGA+TGG + chr8_3:61335078-61335097 Msa1299950:CDS 40.0%
GAGTGAGAATGAGAATGATG+GGG + chr8_3:61335080-61335099 Msa1299950:CDS 40.0%
!!! GCTCTACGTTTCTTTTTTGC+AGG - chr8_3:61335135-61335154 None:intergenic 40.0%
ACGTAGAGCAAAGAAAGAGA+AGG + chr8_3:61335146-61335165 Msa1299950:CDS 40.0%
CGTAGAGCAAAGAAAGAGAA+GGG + chr8_3:61335147-61335166 Msa1299950:CDS 40.0%
AAAGAGAAGGGTGGGAAAAA+TGG + chr8_3:61335159-61335178 Msa1299950:CDS 40.0%
AAGAGAAGGGTGGGAAAAAT+GGG + chr8_3:61335160-61335179 Msa1299950:CDS 40.0%
! GTCTAGTTCCCAATATTTCG+AGG + chr8_3:61335263-61335282 Msa1299950:CDS 40.0%
! GAGGAAAATGAGGATAATGG+CGG + chr8_3:61335282-61335301 Msa1299950:CDS 40.0%
ACAACATAGCAACGTTATCC+TGG - chr8_3:61335705-61335724 None:intergenic 40.0%
GCAGAAAGGCTTCTGTTTAA+TGG - chr8_3:61335740-61335759 None:intergenic 40.0%
GCAGCAATGAAAAGTCGATA+AGG + chr8_3:61335990-61336009 Msa1299950:CDS 40.0%
! ATATCATCGAGTGGTTTTCC+AGG + chr8_3:61336043-61336062 Msa1299950:three_prime_UTR 40.0%
TAAATTGTAGCTCAGCCTTC+CGG + chr8_3:61336126-61336145 Msa1299950:three_prime_UTR 40.0%
ATCCATACCCTTATGAACTG+TGG - chr8_3:61336172-61336191 None:intergenic 40.0%
! GTTCATAAGGGTATGGATAC+AGG + chr8_3:61336174-61336193 Msa1299950:three_prime_UTR 40.0%
!!! GTTTTTCTAGAGTGACGAGA+TGG + chr8_3:61336312-61336331 Msa1299950:three_prime_UTR 40.0%
TTCCGGAAACAATGGTGAAA+TGG + chr8_3:61336348-61336367 Msa1299950:three_prime_UTR 40.0%
GCAATGGAATCGAGATCTAT+CGG + chr8_3:61336420-61336439 Msa1299950:three_prime_UTR 40.0%
CAATGGAATCGAGATCTATC+GGG + chr8_3:61336421-61336440 Msa1299950:three_prime_UTR 40.0%
TAAGCTGATCGGAGTTCTTC+CGG - chr8_3:61333689-61333708 None:intergenic 45.0%
AAGAACTCCGATCAGCTTAC+CGG + chr8_3:61333690-61333709 Msa1299950:CDS 45.0%
! CTGATTTGACGAGCTTGTCA+GGG - chr8_3:61333736-61333755 None:intergenic 45.0%
TTGTAGCTCCTGAAACTGAG+CGG - chr8_3:61333780-61333799 None:intergenic 45.0%
!! TTTTCGGGGTTTTCGGATTC+CGG + chr8_3:61333938-61333957 Msa1299950:CDS 45.0%
TGTTAGACAGGCTCCTCTTA+TGG + chr8_3:61334054-61334073 Msa1299950:CDS 45.0%
GTTAGACAGGCTCCTCTTAT+GGG + chr8_3:61334055-61334074 Msa1299950:CDS 45.0%
TTAGACAGGCTCCTCTTATG+GGG + chr8_3:61334056-61334075 Msa1299950:CDS 45.0%
TTTGGATAGTCCTTATGCGC+AGG + chr8_3:61334081-61334100 Msa1299950:CDS 45.0%
TAGTCCTTATGCGCAGGTTA+CGG + chr8_3:61334087-61334106 Msa1299950:CDS 45.0%
GGAGATGGAGAAGAAGAAAG+AGG + chr8_3:61334339-61334358 Msa1299950:CDS 45.0%
GATGGAGAAGAAGAAAGAGG+AGG + chr8_3:61334342-61334361 Msa1299950:CDS 45.0%
GAAGAAGAAAGAGGAGGAGA+AGG + chr8_3:61334348-61334367 Msa1299950:CDS 45.0%
TCATCAACCTTAGCCCAATC+AGG - chr8_3:61334430-61334449 None:intergenic 45.0%
GGAGAAAGTTGCTGAGTTCA+AGG + chr8_3:61334585-61334604 Msa1299950:CDS 45.0%
AGAGGAGTTAGAAGCTGAAG+TGG + chr8_3:61334624-61334643 Msa1299950:CDS 45.0%
ACGAGGAAGGTGAAAGTGAA+GGG + chr8_3:61334647-61334666 Msa1299950:CDS 45.0%
! CAGAAGACGAGAGTGCAAAT+GGG + chr8_3:61334755-61334774 Msa1299950:CDS 45.0%
! AGAAGACGAGAGTGCAAATG+GGG + chr8_3:61334756-61334775 Msa1299950:CDS 45.0%
AACAATGGTATCTGGGCACA+AGG + chr8_3:61334903-61334922 Msa1299950:CDS 45.0%
ACAATGGTATCTGGGCACAA+GGG + chr8_3:61334904-61334923 Msa1299950:CDS 45.0%
AGTTGGAGTTTCAGAAGCCT+CGG - chr8_3:61335052-61335071 None:intergenic 45.0%
! GAGAATGAGAATGATGGGGT+TGG + chr8_3:61335084-61335103 Msa1299950:CDS 45.0%
AGAGCAAAGAAAGAGAAGGG+TGG + chr8_3:61335150-61335169 Msa1299950:CDS 45.0%
GAGCAAAGAAAGAGAAGGGT+GGG + chr8_3:61335151-61335170 Msa1299950:CDS 45.0%
AGAGAAGGGTGGGAAAAATG+GGG + chr8_3:61335161-61335180 Msa1299950:CDS 45.0%
GGTAAAGAGAATGAGCAGGT+GGG + chr8_3:61335303-61335322 Msa1299950:CDS 45.0%
GCACAATACAGGAACAGAAC+AGG - chr8_3:61335455-61335474 None:intergenic 45.0%
CAGTAGTCATGGCACAATAC+AGG - chr8_3:61335466-61335485 None:intergenic 45.0%
! TTTTTGCGAGACATGTGAGC+AGG + chr8_3:61335815-61335834 Msa1299950:CDS 45.0%
CATAAACATCTGAGCGACTC+TGG + chr8_3:61335963-61335982 Msa1299950:CDS 45.0%
ATAACATGCTTTCTGCCGGA+AGG - chr8_3:61336144-61336163 None:intergenic 45.0%
TGCCACAGTTCATAAGGGTA+TGG + chr8_3:61336167-61336186 Msa1299950:three_prime_UTR 45.0%
TTCTGTCGTCGTCAACCTCA+GGG + chr8_3:61333541-61333560 Msa1299950:five_prime_UTR 50.0%
! CGAAGCAACAATGGCATCGA+CGG + chr8_3:61333616-61333635 Msa1299950:exon 50.0%
CGATGCCACTACGAAGTTCT+CGG + chr8_3:61333644-61333663 Msa1299950:CDS 50.0%
GTAGACCGAGAACTTCGTAG+TGG - chr8_3:61333652-61333671 None:intergenic 50.0%
CGAGTTTCCGGTAAGCTGAT+CGG - chr8_3:61333700-61333719 None:intergenic 50.0%
ATTTGACGAGCTTGTCAGGG+TGG - chr8_3:61333733-61333752 None:intergenic 50.0%
! CCTGATTTGACGAGCTTGTC+AGG - chr8_3:61333737-61333756 None:intergenic 50.0%
CCTGACAAGCTCGTCAAATC+AGG + chr8_3:61333734-61333753 Msa1299950:CDS 50.0%
!! TGGATCGGAGAGTACCTCAT+AGG - chr8_3:61333807-61333826 None:intergenic 50.0%
! TGAGGTACTCTCCGATCCAA+AGG + chr8_3:61333808-61333827 Msa1299950:CDS 50.0%
CCAAGCTCGTTCCTTTGGAT+CGG - chr8_3:61333822-61333841 None:intergenic 50.0%
TCGTACCAAGCTCGTTCCTT+TGG - chr8_3:61333827-61333846 None:intergenic 50.0%
CGAAAACAGGTCAGGGACAA+CGG - chr8_3:61333900-61333919 None:intergenic 50.0%
! GGGTTTTCGGATTCCGGTAA+GGG + chr8_3:61333944-61333963 Msa1299950:CDS 50.0%
GGCTCCTCTTATGGGGAATT+TGG + chr8_3:61334063-61334082 Msa1299950:CDS 50.0%
AAAGCCGTAACCTGCGCATA+AGG - chr8_3:61334094-61334113 None:intergenic 50.0%
GATGAGTATGATGCGATGGC+AGG + chr8_3:61334163-61334182 Msa1299950:CDS 50.0%
AACCTCCGCGACTTCCTATT+CGG - chr8_3:61334190-61334209 None:intergenic 50.0%
AGAAAGAGGAGGAGAAGGAG+AGG + chr8_3:61334353-61334372 Msa1299950:CDS 50.0%
GAAGGAGAGGAAGAGGAAGT+TGG + chr8_3:61334366-61334385 Msa1299950:CDS 50.0%
GAGGAAGAGGAAGTTGGAGA+TGG + chr8_3:61334372-61334391 Msa1299950:CDS 50.0%
AGAGGAAGTTGGAGATGGAG+AGG + chr8_3:61334377-61334396 Msa1299950:CDS 50.0%
GAAGTTGGAGATGGAGAGGA+AGG + chr8_3:61334381-61334400 Msa1299950:CDS 50.0%
TGGCTTATGAGGAGCCTGAT+TGG + chr8_3:61334413-61334432 Msa1299950:CDS 50.0%
GGCTTATGAGGAGCCTGATT+GGG + chr8_3:61334414-61334433 Msa1299950:CDS 50.0%
GTTAGAAGCTGAAGTGGACG+AGG + chr8_3:61334630-61334649 Msa1299950:CDS 50.0%
GACGAGGAAGGTGAAAGTGA+AGG + chr8_3:61334646-61334665 Msa1299950:CDS 50.0%
CGAGGAAGGTGAAAGTGAAG+GGG + chr8_3:61334648-61334667 Msa1299950:CDS 50.0%
GAAGGTGAAAGTGAAGGGGT+TGG + chr8_3:61334652-61334671 Msa1299950:CDS 50.0%
TGAAAGTGAAGGGGTTGGAG+AGG + chr8_3:61334657-61334676 Msa1299950:CDS 50.0%
AAAGTGAGGAGGATGGCGTT+GGG + chr8_3:61334689-61334708 Msa1299950:CDS 50.0%
!! TGGCGTTGGGGTTGATGATT+TGG + chr8_3:61334702-61334721 Msa1299950:CDS 50.0%
! GCAGAAGACGAGAGTGCAAA+TGG + chr8_3:61334754-61334773 Msa1299950:CDS 50.0%
TGCTGAGCATGCAGAAGATG+AGG + chr8_3:61334819-61334838 Msa1299950:CDS 50.0%
TGGGGTTCTTGAAGCAATGC+TGG + chr8_3:61334984-61335003 Msa1299950:CDS 50.0%
GTTCTTGAAGCAATGCTGGC+TGG + chr8_3:61334988-61335007 Msa1299950:CDS 50.0%
! GGCTTGTGTGTTGAAGCACT+GGG - chr8_3:61335030-61335049 None:intergenic 50.0%
GTTGGAGTTTCAGAAGCCTC+GGG - chr8_3:61335051-61335070 None:intergenic 50.0%
!! GAATGATGGGGTTGGTGCTA+TGG + chr8_3:61335092-61335111 Msa1299950:CDS 50.0%
TGGCGGTAAAGAGAATGAGC+AGG + chr8_3:61335299-61335318 Msa1299950:CDS 50.0%
CGGTAAAGAGAATGAGCAGG+TGG + chr8_3:61335302-61335321 Msa1299950:CDS 50.0%
GTGAGCAGGAGTTTGAGTCA+AGG + chr8_3:61335829-61335848 Msa1299950:CDS 50.0%
AGTAGTCGCATATCTGGACC+TGG - chr8_3:61336064-61336083 None:intergenic 50.0%
CTTCTGTCGTCGTCAACCTC+AGG + chr8_3:61333540-61333559 Msa1299950:five_prime_UTR 55.0%
TCTACCTCGCGAATGCTCAC+CGG + chr8_3:61333667-61333686 Msa1299950:CDS 55.0%
CTGAAACTGAGCGGTGGCTT+CGG - chr8_3:61333771-61333790 None:intergenic 55.0%
TAGCTCCTGAAACTGAGCGG+TGG - chr8_3:61333777-61333796 None:intergenic 55.0%
GGAGCTACAACACGCCTATG+AGG + chr8_3:61333790-61333809 Msa1299950:CDS 55.0%
CCGATCCAAAGGAACGAGCT+TGG + chr8_3:61333819-61333838 Msa1299950:CDS 55.0%
! GGGGTTTTCGGATTCCGGTA+AGG + chr8_3:61333943-61333962 Msa1299950:CDS 55.0%
GGCGGATGAGTATGATGCGA+TGG + chr8_3:61334159-61334178 Msa1299950:CDS 55.0%
ATGCGATGGCAGGTCCGAAT+AGG + chr8_3:61334173-61334192 Msa1299950:CDS 55.0%
CAGGTCCGAATAGGAAGTCG+CGG + chr8_3:61334182-61334201 Msa1299950:CDS 55.0%
TAGGAAGTCGCGGAGGTTGA+TGG + chr8_3:61334192-61334211 Msa1299950:CDS 55.0%
AGGAGGAGAAGGAGAGGAAG+AGG + chr8_3:61334359-61334378 Msa1299950:CDS 55.0%
TGGAGATGGAGAGGAAGGAG+AGG + chr8_3:61334386-61334405 Msa1299950:CDS 55.0%
GGAGATGGAGAGGAAGGAGA+GGG + chr8_3:61334387-61334406 Msa1299950:CDS 55.0%
GGAGAGGGCTATGGCTTATG+AGG + chr8_3:61334402-61334421 Msa1299950:CDS 55.0%
TGAGGAGCCTGATTGGGCTA+AGG + chr8_3:61334420-61334439 Msa1299950:CDS 55.0%
GAAGCTGAAGTGGACGAGGA+AGG + chr8_3:61334634-61334653 Msa1299950:CDS 55.0%
GAAAGTGAGGAGGATGGCGT+TGG + chr8_3:61334688-61334707 Msa1299950:CDS 55.0%
AAGTGAGGAGGATGGCGTTG+GGG + chr8_3:61334690-61334709 Msa1299950:CDS 55.0%
GGGGTTGAGCCGAATGATGA+TGG + chr8_3:61334775-61334794 Msa1299950:CDS 55.0%
GGGCTTGTGTGTTGAAGCAC+TGG - chr8_3:61335031-61335050 None:intergenic 55.0%
TGCTTCAACACACAAGCCCG+AGG + chr8_3:61335032-61335051 Msa1299950:CDS 55.0%
CACATGTGAGGCATGTAGCC+AGG + chr8_3:61335684-61335703 Msa1299950:intron 55.0%
TCTTCCGGTGAGCATTCGCG+AGG - chr8_3:61333674-61333693 None:intergenic 60.0%
! GGCGTTGGAGAGCGAGTTTC+CGG - chr8_3:61333712-61333731 None:intergenic 60.0%
CGGTGGCTTCGGATTGAGAG+AGG - chr8_3:61333760-61333779 None:intergenic 60.0%
CGAAGCCACCGCTCAGTTTC+AGG + chr8_3:61333769-61333788 Msa1299950:CDS 60.0%
GTCCGAATAGGAAGTCGCGG+AGG + chr8_3:61334185-61334204 Msa1299950:CDS 60.0%
!! GAAGTCGCGGAGGTTGATGG+AGG + chr8_3:61334195-61334214 Msa1299950:CDS 60.0%
AGGTGAGGAGGAAGGCGAAG+AGG + chr8_3:61334230-61334249 Msa1299950:CDS 60.0%
GGTGAGGAGGAAGGCGAAGA+GGG + chr8_3:61334231-61334250 Msa1299950:CDS 60.0%
GGAGAGGAAGGAGAGGGCTA+TGG + chr8_3:61334393-61334412 Msa1299950:CDS 60.0%
TGGTATCTGGGCACAAGGGC+CGG + chr8_3:61334908-61334927 Msa1299950:CDS 60.0%
CGAGCTTGTCAGGGTGGCGT+TGG - chr8_3:61333727-61333746 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 61333535 61336560 61333535 ID=Msa1299950;Name=Msa1299950
chr8_3 mRNA 61333535 61336560 61333535 ID=Msa1299950-mRNA-1;Parent=Msa1299950;Name=Msa1299950-mRNA-1;_AED=0.06;_eAED=0.06;_QI=91|1|1|1|1|1|3|550|636
chr8_3 exon 61333535 61335428 61333535 ID=Msa1299950-mRNA-1:exon:18036;Parent=Msa1299950-mRNA-1
chr8_3 exon 61335801 61335850 61335801 ID=Msa1299950-mRNA-1:exon:18037;Parent=Msa1299950-mRNA-1
chr8_3 exon 61335953 61336560 61335953 ID=Msa1299950-mRNA-1:exon:18038;Parent=Msa1299950-mRNA-1
chr8_3 five_prime_UTR 61333535 61333625 61333535 ID=Msa1299950-mRNA-1:five_prime_utr;Parent=Msa1299950-mRNA-1
chr8_3 CDS 61333626 61335428 61333626 ID=Msa1299950-mRNA-1:cds;Parent=Msa1299950-mRNA-1
chr8_3 CDS 61335801 61335850 61335801 ID=Msa1299950-mRNA-1:cds;Parent=Msa1299950-mRNA-1
chr8_3 CDS 61335953 61336010 61335953 ID=Msa1299950-mRNA-1:cds;Parent=Msa1299950-mRNA-1
chr8_3 three_prime_UTR 61336011 61336560 61336011 ID=Msa1299950-mRNA-1:three_prime_utr;Parent=Msa1299950-mRNA-1
Gene Sequence

>Msa1299950

ATGGCATCGACGGCGAAGCGATGCCACTACGAAGTTCTCGGTCTACCTCGCGAATGCTCACCGGAAGAACTCCGATCAGCTTACCGGAAACTCGCTCTCCAACGCCACCCTGACAAGCTCGTCAAATCAGGCCTCTCTCAATCCGAAGCCACCGCTCAGTTTCAGGAGCTACAACACGCCTATGAGGTACTCTCCGATCCAAAGGAACGAGCTTGGTACGATTCCCATCGTTCTCAAATCCTCTTCTCCGATCCAAATTCAAAGTCTAATTCCGTTGTCCCTGACCTGTTTTCGTTTTTCTCGAATACCGTATTTTCGGGGTTTTCGGATTCCGGTAAGGGTTTCTATAAGGTTTATTCTGATGTGTTTGATAAAATTCAGGCGAATGAGATTAATTTTGCTAAGAAATTAGGTTTAGGGATTGATTCTGTTAGACAGGCTCCTCTTATGGGGAATTTGGATAGTCCTTATGCGCAGGTTACGGCTTTTTATAGTTATTGGTTGGGATTTTCGACTGTTATGGATTTTTGTTGGGCGGATGAGTATGATGCGATGGCAGGTCCGAATAGGAAGTCGCGGAGGTTGATGGAGGAAGAGAATAATAAGGTGAGGAGGAAGGCGAAGAGGGAGTATAATGATACTGTGAGAAAGTTGGCTGATTTTGTGAAGAAGAGGGATAAGAGAGTGATTGATATGAAGGTGAAGAAGAATTTGGAGATGGAGAAGAAGAAAGAGGAGGAGAAGGAGAGGAAGAGGAAGTTGGAGATGGAGAGGAAGGAGAGGGCTATGGCTTATGAGGAGCCTGATTGGGCTAAGGTTGATGAAGAAGAAGTTGAGGATTTGTATGAGGATGATGAGTTTGAGAAGAAAGATGAGAAGGAGTTTTATTGTGTGTTGTGTGGGAAGAAGTTTAAGAGTGAGAAGCAATGGAAGAATCATGAGCAGAGTAAGAAGCATAAGGAGAAAGTTGCTGAGTTCAAGGATTCACTTGATGATGAAGAGGAGTTAGAAGCTGAAGTGGACGAGGAAGGTGAAAGTGAAGGGGTTGGAGAGGAAAGATTAGAAAGTGAGGAGGATGGCGTTGGGGTTGATGATTTGGAAGAGAGAATTCGAGACAGTCTTAATGTTGCAGAAGACGAGAGTGCAAATGGGGTTGAGCCGAATGATGATGGTGACAATGATGAATTTTTTGATGCTGAGCATGCAGAAGATGAGGAGTTTGATGCGTCAGTTGATTTTGTTGTTAATGACGACGACGACGACGATGATGTTCTTGAAACAATGGTATCTGGGCACAAGGGCCGGTTTGATTTTGATGAGAATGATGGCAACGATGATGATGTTGATGATGATGAAATTGGGGTTCTTGAAGCAATGCTGGCTGGACGTAAGAGCAGAAAACCCAGTGCTTCAACACACAAGCCCGAGGCTTCTGAAACTCCAACTCAAATTGAGAGTGAGAATGAGAATGATGGGGTTGGTGCTATGGAATATAACAACCGAAAACCTGCAAAAAAGAAACGTAGAGCAAAGAAAGAGAAGGGTGGGAAAAATGGGGATGAAACTAATGTGCCTACTAATGGCAAATATGAGAAGAATGTAATCAATATTGGAGATGGCGATTCTTATGCACAAGAGTCTAGTTCCCAATATTTCGAGGAAAATGAGGATAATGGCGGTAAAGAGAATGAGCAGGTGGGTAGAGATAAGAAGAAGATTTCAAATCAACCGGTTGATAAAAAAGGAACTTCAAAGAACACAAAACCCAGATCAAAACTTTCAACCAGAGGAAGAAAACCAAATAGAAATCTTGGTCATTTTTGCGAGACATGTGAGCAGGAGTTTGAGTCAAGGAATAAGTTACATAAACATCTGAGCGACTCTGGACATGCAGCAATGAAAAGTCGATAA

Protein sequence

>Msa1299950

MASTAKRCHYEVLGLPRECSPEELRSAYRKLALQRHPDKLVKSGLSQSEATAQFQELQHAYEVLSDPKERAWYDSHRSQILFSDPNSKSNSVVPDLFSFFSNTVFSGFSDSGKGFYKVYSDVFDKIQANEINFAKKLGLGIDSVRQAPLMGNLDSPYAQVTAFYSYWLGFSTVMDFCWADEYDAMAGPNRKSRRLMEEENNKVRRKAKREYNDTVRKLADFVKKRDKRVIDMKVKKNLEMEKKKEEEKERKRKLEMERKERAMAYEEPDWAKVDEEEVEDLYEDDEFEKKDEKEFYCVLCGKKFKSEKQWKNHEQSKKHKEKVAEFKDSLDDEEELEAEVDEEGESEGVGEERLESEEDGVGVDDLEERIRDSLNVAEDESANGVEPNDDGDNDEFFDAEHAEDEEFDASVDFVVNDDDDDDDVLETMVSGHKGRFDFDENDGNDDDVDDDEIGVLEAMLAGRKSRKPSASTHKPEASETPTQIESENENDGVGAMEYNNRKPAKKKRRAKKEKGGKNGDETNVPTNGKYEKNVINIGDGDSYAQESSSQYFEENEDNGGKENEQVGRDKKKISNQPVDKKGTSKNTKPRSKLSTRGRKPNRNLGHFCETCEQEFESRNKLHKHLSDSGHAAMKSR*