AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0361850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0361850 MtrunA17_Chr3g0100651 94.716 511 25 1 1 511 1 509 0.0 1006
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0361850 AT5G55500.1 59.108 538 181 6 3 511 7 534 0.0 629

Find 156 sgRNAs with CRISPR-Local

Find 508 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCCTTACCTATTGTTTAT+TGG 0.193728 3_1:+52589408 Msa0361850:three_prime_UTR
CCAACATGGTGTAAGTTTAA+AGG 0.195735 3_1:-52588520 None:intergenic
TATGAGACTGCTCTCTTTAA+AGG 0.207320 3_1:+52588376 Msa0361850:CDS
GGCAAAGGGTGGTGAGAGTT+TGG 0.208329 3_1:+52583021 Msa0361850:CDS
AGGTCATGTGAGGGTTATTT+TGG 0.214572 3_1:+52582851 Msa0361850:CDS
GAAGAGGAGGTGGGTGGTTT+AGG 0.229081 3_1:+52582921 Msa0361850:CDS
TATGTTTCTTCTAGAGTTAC+TGG 0.242168 3_1:+52586322 Msa0361850:CDS
CTGAGTTTGGAGAAATGATT+AGG 0.268950 3_1:+52588482 Msa0361850:CDS
GCTCAGTAACCAAACCAATT+TGG 0.274902 3_1:-52589082 None:intergenic
AATTTGGTTGTAGTTATAAA+AGG 0.279021 3_1:-52589066 None:intergenic
TCATGCTATTCTTTCACCTT+TGG 0.279877 3_1:+52588351 Msa0361850:CDS
CATGCTATTCTTTCACCTTT+GGG 0.280020 3_1:+52588352 Msa0361850:CDS
ACTGCACGTATTTCTGAGTT+TGG 0.286664 3_1:+52588469 Msa0361850:CDS
GCAAAGGGTGGTGAGAGTTT+GGG 0.290717 3_1:+52583022 Msa0361850:CDS
CCTCATTTGATCTTTGTAGA+TGG 0.308481 3_1:+52586358 Msa0361850:CDS
AGCGCATTGATCACAGTTTC+AGG 0.313909 3_1:-52588943 None:intergenic
TGTTTGAATCCTTGAACAAT+TGG 0.347645 3_1:+52588653 Msa0361850:CDS
AGGTGGGAGGGTGAGGATGG+TGG 0.348275 3_1:+52582982 Msa0361850:CDS
TGGTTTGGTTACTGAGCTAA+TGG 0.355761 3_1:+52589088 Msa0361850:three_prime_UTR
AGATTATTAGCAGCCAGTTC+AGG 0.373793 3_1:+52588842 Msa0361850:CDS
TGAAGATGAAAAGGAATAGT+AGG 0.379305 3_1:-52582622 None:intergenic
CATACTATGCGTGATTTGAT+TGG 0.386334 3_1:+52583196 Msa0361850:CDS
TAACTACAACCAAATTGGTT+TGG 0.394545 3_1:+52589073 Msa0361850:three_prime_UTR
GAAATGATTAGGGCATCATT+TGG 0.397696 3_1:+52588493 Msa0361850:CDS
GGGAAGATGGTTGTTGATGA+GGG 0.399129 3_1:+52583133 Msa0361850:CDS
GGGTGAGGATGGTGGTGGAG+AGG 0.401838 3_1:+52582990 Msa0361850:CDS
AGGAGTTCAGTTTGTGAAGG+TGG 0.404692 3_1:+52582965 Msa0361850:CDS
GGTGAATAAGAGGGTAGAAT+TGG 0.405117 3_1:-52582797 None:intergenic
CAAAATGTGGACGCCTGAAC+TGG 0.415856 3_1:-52588855 None:intergenic
TTTGAGGTTGATGGTGGTGT+AGG 0.416547 3_1:+52583100 Msa0361850:CDS
TGAGTTTGGAGAAATGATTA+GGG 0.417162 3_1:+52588483 Msa0361850:CDS
AGAAGGAGTTGAAGATGAAA+AGG 0.418362 3_1:-52582631 None:intergenic
TGAAGGTGGGAGGGTGAGGA+TGG 0.418456 3_1:+52582979 Msa0361850:CDS
AAATCATTCCAATAAACAAT+AGG 0.421327 3_1:-52589416 None:intergenic
TGGGAGGGTGAGGATGGTGG+TGG 0.427137 3_1:+52582985 Msa0361850:CDS
GGAGTTCAGTTTGTGAAGGT+GGG 0.429232 3_1:+52582966 Msa0361850:CDS
TCAGGATTTGGTGATGGTGT+AGG 0.429593 3_1:-52582695 None:intergenic
CGCGGCGATGGAAGAGGAGG+TGG 0.430692 3_1:+52582911 Msa0361850:CDS
GCGTACATTGCGCGATGGAA+AGG 0.431360 3_1:+52588877 Msa0361850:CDS
CCTTTAAACTTACACCATGT+TGG 0.433548 3_1:+52588520 Msa0361850:CDS
GAAAGAATTTAATTGTGATA+AGG 0.435133 3_1:+52583240 Msa0361850:CDS
CAGGATTTGGTGATGGTGTA+GGG 0.439027 3_1:-52582694 None:intergenic
ATTGCAGAGTTCAGTGAAAA+GGG 0.439522 3_1:+52589189 Msa0361850:three_prime_UTR
TAACCCTCACATGACCTTAG+TGG 0.440136 3_1:-52582845 None:intergenic
TTTGTGAAGGTGGGAGGGTG+AGG 0.443601 3_1:+52582975 Msa0361850:CDS
TTGTGACCATGGTGAATAAG+AGG 0.447437 3_1:-52582807 None:intergenic
GAGGTGGGTGGTTTAGGTGT+TGG 0.449604 3_1:+52582927 Msa0361850:CDS
ATTAGACGCCCAATTGTTCA+AGG 0.450169 3_1:-52588662 None:intergenic
GTTTGAATCCTTGAACAATT+GGG 0.451278 3_1:+52588654 Msa0361850:CDS
AATTGCAGAGTTCAGTGAAA+AGG 0.454038 3_1:+52589188 Msa0361850:three_prime_UTR
ATCATTGGTGCACATGGTGC+TGG 0.454404 3_1:+52588775 Msa0361850:CDS
TGGAATTGCTGATAACTTGT+TGG 0.454803 3_1:+52589108 Msa0361850:three_prime_UTR
GGTGTAGGGTTTAGAAAAGA+AGG 0.462075 3_1:-52582680 None:intergenic
CGTACATTGCGCGATGGAAA+GGG 0.462270 3_1:+52588878 Msa0361850:CDS
GGAGGAGTTGCCTTTGTTTG+AGG 0.463639 3_1:+52583069 Msa0361850:CDS
CAAAGGGTGGTGAGAGTTTG+GGG 0.468015 3_1:+52583023 Msa0361850:CDS
GATTGAGGAACCAACACTTC+TGG 0.470363 3_1:+52586243 Msa0361850:CDS
TTGAGGTTGATGGTGGTGTA+GGG 0.470897 3_1:+52583101 Msa0361850:CDS
TCGAGCCGCGGCGATGGAAG+AGG 0.474570 3_1:+52582905 Msa0361850:CDS
AGGGTTTGAAAGAGGGAAGA+TGG 0.476065 3_1:+52583120 Msa0361850:CDS
TCTATAAAGGGTCGTCGAAA+AGG 0.476275 3_1:-52582743 None:intergenic
TCTAGACTAGATACTGTGTT+TGG 0.476293 3_1:-52582543 None:intergenic
TTTCTATTTGCAGTGGATTG+AGG 0.477958 3_1:+52586228 Msa0361850:intron
ATGAGACTGCTCTCTTTAAA+GGG 0.481297 3_1:+52588377 Msa0361850:CDS
CTTTGTAGATGGACACTGTA+AGG 0.481763 3_1:+52586369 Msa0361850:CDS
AATCTTCACGACGAACAAAC+AGG 0.493940 3_1:-52588570 None:intergenic
GTTCAGTTTGTGAAGGTGGG+AGG 0.494185 3_1:+52582969 Msa0361850:CDS
ATTGGTAAGATGAAGGTTGT+TGG 0.495939 3_1:+52583214 Msa0361850:CDS
TGGAAATGGATTCACGCGCT+TGG 0.497077 3_1:+52582871 Msa0361850:CDS
TACTATGTTATTGAGAATTG+AGG 0.498812 3_1:+52589445 Msa0361850:three_prime_UTR
ATTGATCACAGTTTCAGGAT+TGG 0.500211 3_1:-52588938 None:intergenic
ACACATGTCTATGAAGGAAC+AGG 0.501258 3_1:+52588726 Msa0361850:CDS
GAGTTACTGGCTTGCCTAGT+CGG 0.506077 3_1:+52586335 Msa0361850:CDS
TTCAGTTTGTGAAGGTGGGA+GGG 0.509183 3_1:+52582970 Msa0361850:CDS
GTGGTGTAGGGTTTGAAAGA+GGG 0.510226 3_1:+52583113 Msa0361850:CDS
CATGTTGGAAAACAAGTCTC+TGG 0.512004 3_1:+52588535 Msa0361850:CDS
CCTGAGTTGTTGACAGTACC+TGG 0.514675 3_1:+52589253 Msa0361850:three_prime_UTR
CAAGATGCATCTGTGATCAT+TGG 0.514771 3_1:+52588760 Msa0361850:CDS
ATCATGCAATTAACCTTGAC+GGG 0.518602 3_1:+52588908 Msa0361850:CDS
AGGGAAGATGGTTGTTGATG+AGG 0.518859 3_1:+52583132 Msa0361850:CDS
CTTAGTGGAGTTGAATTTGA+AGG 0.520958 3_1:-52582830 None:intergenic
GAGTTGCCTTTGTTTGAGGA+TGG 0.530240 3_1:+52583073 Msa0361850:CDS
TATCATGCAATTAACCTTGA+CGG 0.531573 3_1:+52588907 Msa0361850:CDS
TGATTTGATTGGTAAGATGA+AGG 0.539678 3_1:+52583207 Msa0361850:CDS
GGTGGTGTAGGGTTTGAAAG+AGG 0.539698 3_1:+52583112 Msa0361850:CDS
TATTGGAAGAAGTGAAGAGG+AGG 0.541835 3_1:+52583051 Msa0361850:CDS
AAGATCAAATGAGGCCGACT+AGG 0.542033 3_1:-52586349 None:intergenic
TGGATAGGTATGTTCCTAGA+GGG 0.542170 3_1:+52583161 Msa0361850:CDS
ATTCCAATAAACAATAGGTA+AGG 0.542952 3_1:-52589411 None:intergenic
CTTCAAATTCAACTCCACTA+AGG 0.546116 3_1:+52582831 Msa0361850:CDS
GTCTATGAAGGAACAGGTAC+GGG 0.547167 3_1:+52588732 Msa0361850:CDS
GCTTTCCATGTCTCTTCAAG+TGG 0.551230 3_1:-52588274 None:intergenic
ACAGTACCTGGTGCAGTATG+TGG 0.556223 3_1:+52589265 Msa0361850:three_prime_UTR
TGCTCTCTTTAAAGGGCTAA+CGG 0.556353 3_1:+52588384 Msa0361850:CDS
TGTTATTGGAAGAAGTGAAG+AGG 0.556462 3_1:+52583048 Msa0361850:CDS
AAGCGTGTCACCAGAAGTGT+TGG 0.559314 3_1:-52586253 None:intergenic
CCCTATGTTGTATACAGATG+AGG 0.560136 3_1:+52589313 Msa0361850:three_prime_UTR
AAATTGATTATTCAACACAT+AGG 0.560882 3_1:+52589365 Msa0361850:three_prime_UTR
CCCTCATCTGTATACAACAT+AGG 0.561482 3_1:-52589314 None:intergenic
AGGCTCCACTTGAAGAGACA+TGG 0.565654 3_1:+52588269 Msa0361850:intron
TGTAAAATCAACCTTGTCAA+CGG 0.566032 3_1:+52588694 Msa0361850:CDS
GTTCGCACACATGTCTATGA+AGG 0.570162 3_1:+52588720 Msa0361850:CDS
GTTGGTATAGTGAGACATTG+AGG 0.570310 3_1:+52582945 Msa0361850:CDS
GGAAGATGGTTGTTGATGAG+GGG 0.570697 3_1:+52583134 Msa0361850:CDS
ATGACGAAAACATACTGTTC+CGG 0.573877 3_1:-52588332 None:intergenic
CGCGCAATGTACGCAAAATG+TGG 0.573898 3_1:-52588868 None:intergenic
CCTCATCTGTATACAACATA+GGG 0.574738 3_1:-52589313 None:intergenic
CCTATGTTGTATACAGATGA+GGG 0.575785 3_1:+52589314 Msa0361850:three_prime_UTR
TGTCTCATAATCTCCCCTCT+AGG 0.575999 3_1:-52583175 None:intergenic
GAGCTTCTGCACAAGAATTG+TGG 0.576797 3_1:+52588425 Msa0361850:CDS
TTGATGTCAGGATTTGGTGA+TGG 0.577465 3_1:-52582701 None:intergenic
TCTGTGATCATTGGTGCACA+TGG 0.577485 3_1:+52588769 Msa0361850:CDS
TGTCTATGAAGGAACAGGTA+CGG 0.577933 3_1:+52588731 Msa0361850:CDS
TTGAGGAGTTCAGTTTGTGA+AGG 0.578440 3_1:+52582962 Msa0361850:CDS
GAAGTAAAGACAGAGAGAGA+AGG 0.581161 3_1:-52582648 None:intergenic
GAGAGAAGCTATGAACAAGA+AGG 0.584165 3_1:+52582592 Msa0361850:exon
TATTTCACACTGTTACAGAC+TGG 0.585008 3_1:+52586290 Msa0361850:CDS
GTAAGATGAAGGTTGTTGGA+AGG 0.585280 3_1:+52583218 Msa0361850:CDS
TGAAACTGTGATCAATGCGC+TGG 0.590693 3_1:+52588945 Msa0361850:CDS
AAAGCACCATCCTCAAACAA+AGG 0.591101 3_1:-52583079 None:intergenic
GCGGCGATGGAAGAGGAGGT+GGG 0.593055 3_1:+52582912 Msa0361850:CDS
TAGGGTCAAGGATCAAATGA+AGG 0.593936 3_1:-52589295 None:intergenic
ATTGGGCGTCTAATTACAAA+GGG 0.597941 3_1:+52588671 Msa0361850:CDS
TTCAAAACACTCAACATCGA+AGG 0.597984 3_1:-52588984 None:intergenic
ACCTGGTGCAGTATGTGGCA+TGG 0.598771 3_1:+52589270 Msa0361850:three_prime_UTR
AACTCCACTAAGGTCATGTG+AGG 0.600325 3_1:+52582841 Msa0361850:CDS
CTGTATACAACATAGGGTCA+AGG 0.601987 3_1:-52589307 None:intergenic
TAAGAGGGTAGAATTGGCCA+TGG 0.605944 3_1:-52582791 None:intergenic
AATTGGGCGTCTAATTACAA+AGG 0.606833 3_1:+52588670 Msa0361850:CDS
CATTGCGCGATGGAAAGGGT+TGG 0.606956 3_1:+52588882 Msa0361850:CDS
AGCCGCGGCGATGGAAGAGG+AGG 0.611346 3_1:+52582908 Msa0361850:CDS
GTGTAGGGTTTAGAAAAGAA+GGG 0.613051 3_1:-52582679 None:intergenic
AAACCCATATCTTAAAACCA+TGG 0.613317 3_1:+52582774 Msa0361850:CDS
ACCATGCCACATACTGCACC+AGG 0.613734 3_1:-52589271 None:intergenic
GATTGGCATACGACCCGTCA+AGG 0.614488 3_1:-52588921 None:intergenic
GAATTTGAAGGTTGTGACCA+TGG 0.616455 3_1:-52582818 None:intergenic
TTGGATAGGTATGTTCCTAG+AGG 0.621449 3_1:+52583160 Msa0361850:CDS
CCATCTACAAAGATCAAATG+AGG 0.623177 3_1:-52586358 None:intergenic
GGATAGGTATGTTCCTAGAG+GGG 0.624351 3_1:+52583162 Msa0361850:CDS
CCAGGTACTGTCAACAACTC+AGG 0.627793 3_1:-52589253 None:intergenic
TGTGACCATGGTGAATAAGA+GGG 0.639270 3_1:-52582806 None:intergenic
TTGCAGAGTTCAGTGAAAAG+GGG 0.641151 3_1:+52589190 Msa0361850:three_prime_UTR
TTCTACCCTCTTATTCACCA+TGG 0.641695 3_1:+52582801 Msa0361850:CDS
TATTTAGCTCATCCACGTCA+CGG 0.643939 3_1:+52588592 Msa0361850:CDS
GCGATGGAAGAGGAGGTGGG+TGG 0.645124 3_1:+52582915 Msa0361850:CDS
GTTGGAAAACAAGTCTCTGG+AGG 0.675946 3_1:+52588538 Msa0361850:CDS
TAGTTATAAAAGGTTAAACA+CGG 0.684633 3_1:-52589056 None:intergenic
TAGGGTTTAGAAAAGAAGGG+TGG 0.688126 3_1:-52582676 None:intergenic
GTGCGAACAATCCGTTGACA+AGG 0.692298 3_1:-52588705 None:intergenic
AAAGGGTGGTGAGAGTTTGG+GGG 0.694477 3_1:+52583024 Msa0361850:CDS
AGAGCAGTCTCATATCCCAA+AGG 0.695123 3_1:-52588367 None:intergenic
CACCTCCTCTTCCATCGCCG+CGG 0.710542 3_1:-52582910 None:intergenic
CTATGTTGTATACAGATGAG+GGG 0.717407 3_1:+52589315 Msa0361850:three_prime_UTR
ACTCCACTAAGGTCATGTGA+GGG 0.719263 3_1:+52582842 Msa0361850:CDS
TGAATCAAGACTAAGTAACG+AGG 0.736004 3_1:+52588624 Msa0361850:CDS
TTAGCTCATCCACGTCACGG+TGG 0.740259 3_1:+52588595 Msa0361850:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAATAAAAACCATAAA+TGG - chr3_1:52583942-52583961 None:intergenic 10.0%
!!! TTTTATTTTATTTTGGATTT+TGG + chr3_1:52583955-52583974 Msa0361850:intron 10.0%
!!! ATTAAGATATTTGTTATTTA+TGG + chr3_1:52584381-52584400 Msa0361850:intron 10.0%
!! AAAAAAAAACAAAAAGATAA+AGG - chr3_1:52584896-52584915 None:intergenic 10.0%
!! AAAAAATAAAAATAAACGAA+TGG + chr3_1:52586871-52586890 Msa0361850:intron 10.0%
!! ATTATTAGAAAGAAAAAAAA+AGG - chr3_1:52587506-52587525 None:intergenic 10.0%
!! AAAACAAAACAAAAAATATT+GGG - chr3_1:52589342-52589361 None:intergenic 10.0%
!! AAAAACAAAACAAAAAATAT+TGG - chr3_1:52589343-52589362 None:intergenic 10.0%
!! AGTTTATGAATTAAATTCAT+TGG + chr3_1:52583835-52583854 Msa0361850:intron 15.0%
!!! TAATTTTGATTATTCTGAAA+TGG + chr3_1:52584489-52584508 Msa0361850:intron 15.0%
!! ACTTTAATCTATGTATAATA+TGG + chr3_1:52585060-52585079 Msa0361850:intron 15.0%
!! CTTTAATCTATGTATAATAT+GGG + chr3_1:52585061-52585080 Msa0361850:intron 15.0%
!! TTTAATCTATGTATAATATG+GGG + chr3_1:52585062-52585081 Msa0361850:intron 15.0%
!!! AGTTTTGTTTTCAATATATT+TGG - chr3_1:52586577-52586596 None:intergenic 15.0%
!! AATTAGTATAATGACTTATT+TGG - chr3_1:52586950-52586969 None:intergenic 15.0%
!! GAAAGAATTTAATTGTGATA+AGG + chr3_1:52583240-52583259 Msa0361850:CDS 20.0%
!! ATTTAATTGTGATAAGGTAA+AGG + chr3_1:52583246-52583265 Msa0361850:intron 20.0%
!!! AGTTTTTGAATTTGATAGTT+TGG + chr3_1:52583302-52583321 Msa0361850:intron 20.0%
!!! GTTTTTGAATTTGATAGTTT+GGG + chr3_1:52583303-52583322 Msa0361850:intron 20.0%
!!! AGATTGTTTTTATGTTATGA+CGG + chr3_1:52583449-52583468 Msa0361850:intron 20.0%
!! TTTGTGATGAAATCAAATTA+AGG + chr3_1:52583567-52583586 Msa0361850:intron 20.0%
!! AGTCTAATTGTTTATATGAT+TGG + chr3_1:52584182-52584201 Msa0361850:intron 20.0%
!!! AATAGGATATTTGTTGTTTA+TGG + chr3_1:52584340-52584359 Msa0361850:intron 20.0%
!!! AAATTTGTTTCTCTTTTAAG+AGG + chr3_1:52584535-52584554 Msa0361850:intron 20.0%
!!! TAAAATTCTAGGAAGATAAA+GGG - chr3_1:52585105-52585124 None:intergenic 20.0%
!! ATCCATATCTAGAAAAAAAT+TGG + chr3_1:52585185-52585204 Msa0361850:intron 20.0%
!!! ATATTTTTTCTCAGTTTTCT+CGG - chr3_1:52585275-52585294 None:intergenic 20.0%
!! TTTAACTGAAACACAAAAAA+AGG + chr3_1:52585789-52585808 Msa0361850:intron 20.0%
!! TTAATCCTTTATGTTACAAA+AGG - chr3_1:52585828-52585847 None:intergenic 20.0%
!! CTATATATTACGAAAGATTT+GGG - chr3_1:52586015-52586034 None:intergenic 20.0%
!! AAAATTAAATTAAAGGACTC+CGG + chr3_1:52586074-52586093 Msa0361850:intron 20.0%
!! GAAACAATTGAAAAACAAAA+AGG - chr3_1:52586125-52586144 None:intergenic 20.0%
!! CATTATATTATATCAAGAAG+AGG - chr3_1:52586147-52586166 None:intergenic 20.0%
!! CTCATTATGAAATATGAAAA+TGG + chr3_1:52586465-52586484 Msa0361850:intron 20.0%
!! TGAAAATTAGTTATTCATGT+TGG + chr3_1:52586694-52586713 Msa0361850:intron 20.0%
!!! ACTACTATAGTTTTTCATTT+TGG - chr3_1:52586815-52586834 None:intergenic 20.0%
!!! AAAATGTAGCATAATTTTGA+GGG - chr3_1:52587367-52587386 None:intergenic 20.0%
!!! AAAATGTAGCATAATTTTGA+GGG - chr3_1:52587367-52587386 None:intergenic 20.0%
!!! TAAAATGTAGCATAATTTTG+AGG - chr3_1:52587468-52587487 None:intergenic 20.0%
!! GAATGATAATAGATATTCAT+TGG + chr3_1:52587573-52587592 Msa0361850:intron 20.0%
!!! TAGGGTATTATTTTTCATTT+AGG + chr3_1:52587862-52587881 Msa0361850:intron 20.0%
!!! AGGGTATTATTTTTCATTTA+GGG + chr3_1:52587863-52587882 Msa0361850:intron 20.0%
!!! TTTTTTTGATGTCCATATTA+GGG - chr3_1:52587892-52587911 None:intergenic 20.0%
!! TAATATGGACATCAAAAAAA+GGG + chr3_1:52587892-52587911 Msa0361850:intron 20.0%
!!! TATTTTACTAAAAATTGTGG+GGG - chr3_1:52587931-52587950 None:intergenic 20.0%
!!! GTATTTTACTAAAAATTGTG+GGG - chr3_1:52587932-52587951 None:intergenic 20.0%
!!! GGTATTTTACTAAAAATTGT+GGG - chr3_1:52587933-52587952 None:intergenic 20.0%
!! TCAAAAAAATAAACGGAAAA+AGG - chr3_1:52587959-52587978 None:intergenic 20.0%
!! GGAATTGTCAAAAAAATAAA+CGG - chr3_1:52587966-52587985 None:intergenic 20.0%
!! TCTGTATATATAATGTTTGA+AGG - chr3_1:52588172-52588191 None:intergenic 20.0%
!! TAGTTATAAAAGGTTAAACA+CGG - chr3_1:52589059-52589078 None:intergenic 20.0%
!! AATTTGGTTGTAGTTATAAA+AGG - chr3_1:52589069-52589088 None:intergenic 20.0%
!!! TTTTATAACTACAACCAAAT+TGG + chr3_1:52589068-52589087 Msa0361850:three_prime_UTR 20.0%
!! AAATTGATTATTCAACACAT+AGG + chr3_1:52589365-52589384 Msa0361850:three_prime_UTR 20.0%
!! AAATCATTCCAATAAACAAT+AGG - chr3_1:52589419-52589438 None:intergenic 20.0%
!!! AAAATTTTGATGTCAGGATT+TGG - chr3_1:52582710-52582729 None:intergenic 25.0%
!!! TTAGTGAAAATTTTGATGTC+AGG - chr3_1:52582716-52582735 None:intergenic 25.0%
!! GTTTTGTGTTTCTCTATAAA+GGG - chr3_1:52582758-52582777 None:intergenic 25.0%
!! GATTAATTTTCATACACTGT+CGG + chr3_1:52583351-52583370 Msa0361850:intron 25.0%
! GTTACACGAATTAAATTCAT+TGG + chr3_1:52583497-52583516 Msa0361850:intron 25.0%
!! TAAATTCATTGGTTAGTTGT+TGG + chr3_1:52583508-52583527 Msa0361850:intron 25.0%
!! AAATTCATTGGTTAGTTGTT+GGG + chr3_1:52583509-52583528 Msa0361850:intron 25.0%
!!! AGTTTTTTACTTTGATCAGT+TGG + chr3_1:52583658-52583677 Msa0361850:intron 25.0%
!!! GTTTTTTACTTTGATCAGTT+GGG + chr3_1:52583659-52583678 Msa0361850:intron 25.0%
!! TAAATTCATTGGTTAGTTGT+TGG + chr3_1:52583508-52583527 Msa0361850:intron 25.0%
!! AAATTCATTGGTTAGTTGTT+GGG + chr3_1:52583509-52583528 Msa0361850:intron 25.0%
! GTTTGTGATGAAATTGAAAT+AGG + chr3_1:52584323-52584342 Msa0361850:intron 25.0%
! TTGGTGAATGAAATTATGAA+AGG + chr3_1:52584611-52584630 Msa0361850:intron 25.0%
! AATGAGAACAATTTAGAGAT+TGG + chr3_1:52584683-52584702 Msa0361850:intron 25.0%
! TGTTTGATTCCTTTATACAA+AGG - chr3_1:52584754-52584773 None:intergenic 25.0%
! GAACCTTGAAAATAAGTTAA+GGG - chr3_1:52584865-52584884 None:intergenic 25.0%
!!! CTTAACTTATTTTCAAGGTT+CGG + chr3_1:52584864-52584883 Msa0361850:intron 25.0%
!!! TTTTTTTTTCCTTCTCAAGT+TGG + chr3_1:52584915-52584934 Msa0361850:intron 25.0%
! ACTGTTAAATAACACTTATG+TGG + chr3_1:52584990-52585009 Msa0361850:intron 25.0%
!! CTAAAATTCTAGGAAGATAA+AGG - chr3_1:52585106-52585125 None:intergenic 25.0%
!! TTGTCTAGAACTAAAATTCT+AGG - chr3_1:52585116-52585135 None:intergenic 25.0%
!!! TTTTAGTTCTAGACAAAAAC+TGG + chr3_1:52585120-52585139 Msa0361850:intron 25.0%
!!! TTTAGTTCTAGACAAAAACT+GGG + chr3_1:52585121-52585140 Msa0361850:intron 25.0%
!! TTTTCTAGATATGGATTTCT+AGG - chr3_1:52585181-52585200 None:intergenic 25.0%
!!! TGCCAATTTTTTTCTAGATA+TGG - chr3_1:52585190-52585209 None:intergenic 25.0%
! GAACTAATCTTATATTCCTA+GGG - chr3_1:52585220-52585239 None:intergenic 25.0%
!!! GTTTTGATGAGGATATTTTT+GGG - chr3_1:52585253-52585272 None:intergenic 25.0%
!!! TTTTCTGTTTTTGTTTTCCA+GGG - chr3_1:52585389-52585408 None:intergenic 25.0%
!! TAGAATTTTCATTCGTACAA+TGG - chr3_1:52585572-52585591 None:intergenic 25.0%
!!! TTTTTTATTCTCCCTTTTCT+GGG - chr3_1:52585659-52585678 None:intergenic 25.0%
! TAATCAATCACATGTGTTAT+TGG + chr3_1:52585738-52585757 Msa0361850:intron 25.0%
! TTCAGTTAAAAAATCCTATG+TGG - chr3_1:52585779-52585798 None:intergenic 25.0%
! TGTAACATAAAGGATTAACT+TGG + chr3_1:52585830-52585849 Msa0361850:intron 25.0%
! GTAACATAAAGGATTAACTT+GGG + chr3_1:52585831-52585850 Msa0361850:intron 25.0%
!! TTAACTTGGGAGAAAAATAA+AGG + chr3_1:52585844-52585863 Msa0361850:intron 25.0%
! TCATTCTTTAACATATTGAC+AGG + chr3_1:52585968-52585987 Msa0361850:intron 25.0%
! GCTATATATTACGAAAGATT+TGG - chr3_1:52586016-52586035 None:intergenic 25.0%
! AAATTAAATTAAAGGACTCC+GGG + chr3_1:52586075-52586094 Msa0361850:intron 25.0%
! ACAATTGAAAAACAAAAAGG+AGG - chr3_1:52586122-52586141 None:intergenic 25.0%
! AACATAGTAGAATCATAACA+AGG + chr3_1:52586775-52586794 Msa0361850:intron 25.0%
!!! GTAAGAAATAGGGTTTTTTA+GGG + chr3_1:52587230-52587249 Msa0361850:intron 25.0%
!!! TAAGAAATAGGGTTTTTTAG+GGG + chr3_1:52587231-52587250 Msa0361850:intron 25.0%
!!! TTTTTTAGGGGTAAAATTGT+GGG + chr3_1:52587243-52587262 Msa0361850:intron 25.0%
!! CAAAATGTAGCATAATTTTG+AGG - chr3_1:52587368-52587387 None:intergenic 25.0%
!! CTCAAAATTATGCTACATTT+TGG + chr3_1:52587366-52587385 Msa0361850:intron 25.0%
! TGATAATAGATATTCATTGG+TGG + chr3_1:52587576-52587595 Msa0361850:intron 25.0%
!!! AAATGGAAGTTTGTTTTGTT+AGG + chr3_1:52587843-52587862 Msa0361850:intron 25.0%
!!! AATGGAAGTTTGTTTTGTTA+GGG + chr3_1:52587844-52587863 Msa0361850:intron 25.0%
!!! CTTTTTTTGATGTCCATATT+AGG - chr3_1:52587893-52587912 None:intergenic 25.0%
! CTAATATGGACATCAAAAAA+AGG + chr3_1:52587891-52587910 Msa0361850:intron 25.0%
! AATATGGACATCAAAAAAAG+GGG + chr3_1:52587893-52587912 Msa0361850:intron 25.0%
!! CGGTATTTTACTAAAAATTG+TGG - chr3_1:52587934-52587953 None:intergenic 25.0%
!! ACTATTACCCTTATTTCTTA+GGG - chr3_1:52588041-52588060 None:intergenic 25.0%
!! AACTATTACCCTTATTTCTT+AGG - chr3_1:52588042-52588061 None:intergenic 25.0%
!! AGTTTCTTCCAATATTTTTC+AGG + chr3_1:52588249-52588268 Msa0361850:intron 25.0%
! ATTCCTTACCTATTGTTTAT+TGG + chr3_1:52589408-52589427 Msa0361850:three_prime_UTR 25.0%
! ATTCCAATAAACAATAGGTA+AGG - chr3_1:52589414-52589433 None:intergenic 25.0%
! TACTATGTTATTGAGAATTG+AGG + chr3_1:52589445-52589464 Msa0361850:three_prime_UTR 25.0%
TGAAGATGAAAAGGAATAGT+AGG - chr3_1:52582625-52582644 None:intergenic 30.0%
!! GGTTTTGTGTTTCTCTATAA+AGG - chr3_1:52582759-52582778 None:intergenic 30.0%
AAACCCATATCTTAAAACCA+TGG + chr3_1:52582774-52582793 Msa0361850:CDS 30.0%
TGATTTGATTGGTAAGATGA+AGG + chr3_1:52583207-52583226 Msa0361850:CDS 30.0%
TTGTGATAAGGTAAAGGTTT+AGG + chr3_1:52583252-52583271 Msa0361850:intron 30.0%
!! GATAGTTTGGGTTGTTATTA+TGG + chr3_1:52583315-52583334 Msa0361850:intron 30.0%
! TGGGTTGTTATTATGGTTAT+CGG + chr3_1:52583322-52583341 Msa0361850:intron 30.0%
! AATTCATTGGTTAGTTGTTG+GGG + chr3_1:52583510-52583529 Msa0361850:intron 30.0%
!! GGAAATGTTGTTTAGAGTTT+TGG + chr3_1:52583538-52583557 Msa0361850:intron 30.0%
GAGAGAATTTGATTGTGATA+AGG + chr3_1:52583589-52583608 Msa0361850:intron 30.0%
AATTTGATTGTGATAAGGTG+AGG + chr3_1:52583594-52583613 Msa0361850:intron 30.0%
! AATTCATTGGTTAGTTGTTG+GGG + chr3_1:52583510-52583529 Msa0361850:intron 30.0%
!! TGTTGTCAGGTTTAGAATTT+TGG + chr3_1:52583881-52583900 Msa0361850:intron 30.0%
CTTGTGATGAAATCAAACTT+AGG + chr3_1:52583910-52583929 Msa0361850:intron 30.0%
! ACTTAGGTATTTGCCATTTA+TGG + chr3_1:52583926-52583945 Msa0361850:intron 30.0%
AGTTTATGAGTTTGATCAGT+TGG + chr3_1:52584045-52584064 Msa0361850:intron 30.0%
GTTTATGAGTTTGATCAGTT+GGG + chr3_1:52584046-52584065 Msa0361850:intron 30.0%
! TGGAGATTAATTTTCATCCA+CGG + chr3_1:52584085-52584104 Msa0361850:intron 30.0%
!! CTACTTTTCAGTCATACATA+TGG - chr3_1:52584152-52584171 None:intergenic 30.0%
CATGTATGAATTCAATTCTC+TGG + chr3_1:52584250-52584269 Msa0361850:intron 30.0%
! AATTCTCTGGTTAGTTATTG+TGG + chr3_1:52584263-52584282 Msa0361850:intron 30.0%
!! CTTTGAAGTTTAAGAGATGT+TGG + chr3_1:52584456-52584475 Msa0361850:intron 30.0%
!! TTTGTTTCTCTTTTAAGAGG+TGG + chr3_1:52584538-52584557 Msa0361850:intron 30.0%
!! TTGTTTCTCTTTTAAGAGGT+GGG + chr3_1:52584539-52584558 Msa0361850:intron 30.0%
AATGAAATTATGAAAGGCAG+AGG + chr3_1:52584617-52584636 Msa0361850:intron 30.0%
AGAACAATTTAGAGATTGGA+GGG + chr3_1:52584687-52584706 Msa0361850:intron 30.0%
! GATGAGAAATTTTCCAAAAC+AGG + chr3_1:52584724-52584743 Msa0361850:intron 30.0%
! ATACAAAGGTTTACCTGTTT+TGG - chr3_1:52584740-52584759 None:intergenic 30.0%
ACAGGTAAACCTTTGTATAA+AGG + chr3_1:52584742-52584761 Msa0361850:intron 30.0%
!! GTTCCCTTAACTTATTTTCA+AGG + chr3_1:52584859-52584878 Msa0361850:intron 30.0%
CGAACCTTGAAAATAAGTTA+AGG - chr3_1:52584866-52584885 None:intergenic 30.0%
GGAACTAATCTTATATTCCT+AGG - chr3_1:52585221-52585240 None:intergenic 30.0%
!!! GATATTTTTGGGTCTTGAAA+AGG - chr3_1:52585242-52585261 None:intergenic 30.0%
!! GGTTTTGATGAGGATATTTT+TGG - chr3_1:52585254-52585273 None:intergenic 30.0%
!!! GTTTTCTGTTTTTGTTTTCC+AGG - chr3_1:52585390-52585409 None:intergenic 30.0%
!!! CTTTTTCAAAATGAGAGTGA+TGG - chr3_1:52585412-52585431 None:intergenic 30.0%
!!! GTTTTTTATTCTCCCTTTTC+TGG - chr3_1:52585660-52585679 None:intergenic 30.0%
AGGGAGAATAAAAAACACTT+AGG + chr3_1:52585664-52585683 Msa0361850:intron 30.0%
GGGAGAATAAAAAACACTTA+GGG + chr3_1:52585665-52585684 Msa0361850:intron 30.0%
AACACATGTGATTGATTATG+TGG - chr3_1:52585736-52585755 None:intergenic 30.0%
GAAACACAAAAAAAGGTCAA+TGG + chr3_1:52585796-52585815 Msa0361850:intron 30.0%
! GCTATCCTTTTGTAACATAA+AGG + chr3_1:52585820-52585839 Msa0361850:intron 30.0%
GAATCAAAGAAAATTACTCC+CGG - chr3_1:52586096-52586115 None:intergenic 30.0%
! TTTTATGTACTTTTGACACG+AGG + chr3_1:52586204-52586223 Msa0361850:intron 30.0%
!! TATGTTTCTTCTAGAGTTAC+TGG + chr3_1:52586322-52586341 Msa0361850:CDS 30.0%
! TTTCAACTATCTGATGATGT+TGG + chr3_1:52586430-52586449 Msa0361850:intron 30.0%
TTTGTCATTAGCTGTTTACT+TGG + chr3_1:52586548-52586567 Msa0361850:intron 30.0%
!! GAAAACAAAACTCTAAAGTG+AGG + chr3_1:52586585-52586604 Msa0361850:intron 30.0%
TTTGGATGTTATGCAACTTA+TGG - chr3_1:52586932-52586951 None:intergenic 30.0%
!!! CGTAAGAAATAGGGTTTTTT+AGG + chr3_1:52587229-52587248 Msa0361850:intron 30.0%
!!! GTTTTTTAGGGGTAAAATTG+TGG + chr3_1:52587242-52587261 Msa0361850:intron 30.0%
GGTAGTGATTTAAATGAACT+TGG + chr3_1:52587264-52587283 Msa0361850:intron 30.0%
!!! AATTATGCTACATTTTGGCT+AGG + chr3_1:52587371-52587390 Msa0361850:intron 30.0%
!!! ATTATGCTACATTTTGGCTA+GGG + chr3_1:52587372-52587391 Msa0361850:intron 30.0%
! AAACGGCAACATAATTTTGA+GGG - chr3_1:52587407-52587426 None:intergenic 30.0%
! AAAATTATGTTGCCGTTTGT+AGG + chr3_1:52587409-52587428 Msa0361850:intron 30.0%
CTTTCTAATAATGATACCAC+TGG + chr3_1:52587514-52587533 Msa0361850:intron 30.0%
TTCTTATCAGCTACATTTGA+TGG - chr3_1:52587550-52587569 None:intergenic 30.0%
! TAGATATTCATTGGTGGTAT+AGG + chr3_1:52587582-52587601 Msa0361850:intron 30.0%
! ACAAATTTTCACTTGAACCT+TGG - chr3_1:52587659-52587678 None:intergenic 30.0%
! GGTTCAAGTGAAAATTTGTT+AGG + chr3_1:52587660-52587679 Msa0361850:intron 30.0%
!! GTGAAAATTTGTTAGGTACT+TGG + chr3_1:52587667-52587686 Msa0361850:intron 30.0%
ACAGAATAATAACTCGTGTT+TGG - chr3_1:52587713-52587732 None:intergenic 30.0%
AAAATAAACGGAAAAAGGTG+CGG - chr3_1:52587954-52587973 None:intergenic 30.0%
TAATGTGGACATAAGAAAAG+GGG - chr3_1:52588013-52588032 None:intergenic 30.0%
CTAATGTGGACATAAGAAAA+GGG - chr3_1:52588014-52588033 None:intergenic 30.0%
! CTTTTCTTATGTCCACATTA+GGG + chr3_1:52588013-52588032 Msa0361850:intron 30.0%
TTGTGATTAATCTGTAGTTG+TGG + chr3_1:52588091-52588110 Msa0361850:intron 30.0%
! TTAATCTGTAGTTGTGGTTT+TGG + chr3_1:52588097-52588116 Msa0361850:intron 30.0%
AGATATGCTAAAAACTTCAC+CGG + chr3_1:52588313-52588332 Msa0361850:CDS 30.0%
! ACGGAAGATATATTTTGCAA+CGG + chr3_1:52588403-52588422 Msa0361850:CDS 30.0%
TGAGTTTGGAGAAATGATTA+GGG + chr3_1:52588483-52588502 Msa0361850:CDS 30.0%
TGTTTGAATCCTTGAACAAT+TGG + chr3_1:52588653-52588672 Msa0361850:CDS 30.0%
GTTTGAATCCTTGAACAATT+GGG + chr3_1:52588654-52588673 Msa0361850:CDS 30.0%
TGTAAAATCAACCTTGTCAA+CGG + chr3_1:52588694-52588713 Msa0361850:CDS 30.0%
!!! ATCTCTAGAATCACAGTTTT+AGG - chr3_1:52588826-52588845 None:intergenic 30.0%
TATCATGCAATTAACCTTGA+CGG + chr3_1:52588907-52588926 Msa0361850:CDS 30.0%
TAACTACAACCAAATTGGTT+TGG + chr3_1:52589073-52589092 Msa0361850:three_prime_UTR 30.0%
! CAATTTTCTTCAGTTGAACA+TGG - chr3_1:52589173-52589192 None:intergenic 30.0%
TCTAGACTAGATACTGTGTT+TGG - chr3_1:52582546-52582565 None:intergenic 35.0%
AGAAGGAGTTGAAGATGAAA+AGG - chr3_1:52582634-52582653 None:intergenic 35.0%
GTGTAGGGTTTAGAAAAGAA+GGG - chr3_1:52582682-52582701 None:intergenic 35.0%
!!! TGGCCATGGTTTTAAGATAT+GGG - chr3_1:52582780-52582799 None:intergenic 35.0%
!!! TTGGCCATGGTTTTAAGATA+TGG - chr3_1:52582781-52582800 None:intergenic 35.0%
CTTAGTGGAGTTGAATTTGA+AGG - chr3_1:52582833-52582852 None:intergenic 35.0%
CTTCAAATTCAACTCCACTA+AGG + chr3_1:52582831-52582850 Msa0361850:CDS 35.0%
!!! TGTGAGGGTTATTTTGGAAA+TGG + chr3_1:52582857-52582876 Msa0361850:CDS 35.0%
GAGAGGATAAAAATGGCAAA+GGG + chr3_1:52583007-52583026 Msa0361850:CDS 35.0%
TGTTATTGGAAGAAGTGAAG+AGG + chr3_1:52583048-52583067 Msa0361850:CDS 35.0%
CATACTATGCGTGATTTGAT+TGG + chr3_1:52583196-52583215 Msa0361850:CDS 35.0%
ATTGGTAAGATGAAGGTTGT+TGG + chr3_1:52583214-52583233 Msa0361850:CDS 35.0%
ATTGTGATAAGGTGAGGTTT+AGG + chr3_1:52583600-52583619 Msa0361850:intron 35.0%
TTTGATCAGTTGGGTGTTTA+TGG + chr3_1:52583668-52583687 Msa0361850:intron 35.0%
!! GGAGTTTAATTTTCATACGC+TGG + chr3_1:52583701-52583720 Msa0361850:intron 35.0%
! TTTGGAATTTGCTTCTGATC+AGG + chr3_1:52583973-52583992 Msa0361850:intron 35.0%
! AATTTGCTTCTGATCAGGTA+AGG + chr3_1:52583978-52583997 Msa0361850:intron 35.0%
TTTGATCAGTTGGGTGTTTA+TGG + chr3_1:52583668-52583687 Msa0361850:intron 35.0%
! TTGATTTTCGAATCAGTGCT+TGG + chr3_1:52584418-52584437 Msa0361850:intron 35.0%
TGAAGTTTAAGAGATGTTGG+TGG + chr3_1:52584459-52584478 Msa0361850:intron 35.0%
AGGCAGAGGATTTAATGTAA+CGG + chr3_1:52584631-52584650 Msa0361850:intron 35.0%
GAGGATTTAATGTAACGGTT+AGG + chr3_1:52584636-52584655 Msa0361850:intron 35.0%
GAGAACAATTTAGAGATTGG+AGG + chr3_1:52584686-52584705 Msa0361850:intron 35.0%
CATAAAGAACCAACTTGAGA+AGG - chr3_1:52584927-52584946 None:intergenic 35.0%
GACGTCATCATTAATGAAAG+AGG + chr3_1:52585031-52585050 Msa0361850:intron 35.0%
! GAGGAACTAATCTTGTTGTA+AGG - chr3_1:52585156-52585175 None:intergenic 35.0%
! AGATATGGATTTCTAGGAAG+AGG - chr3_1:52585175-52585194 None:intergenic 35.0%
ATGACAATTGATGAAGGTCT+GGG - chr3_1:52585365-52585384 None:intergenic 35.0%
! GAAAACAGTGTGCTGATATT+TGG + chr3_1:52585521-52585540 Msa0361850:intron 35.0%
TTTCATTCGTACAATGGCAT+TGG - chr3_1:52585566-52585585 None:intergenic 35.0%
ATTTCTCCTAAACCCAGAAA+AGG + chr3_1:52585644-52585663 Msa0361850:intron 35.0%
TTTCTCCTAAACCCAGAAAA+GGG + chr3_1:52585645-52585664 Msa0361850:intron 35.0%
CTTAGGGTTTAATTGCAAGA+TGG + chr3_1:52585681-52585700 Msa0361850:intron 35.0%
ATAGTAAGAATCCGTGTAAC+TGG + chr3_1:52585900-52585919 Msa0361850:intron 35.0%
! GACACAATAACTCTCCTTTT+TGG - chr3_1:52585947-52585966 None:intergenic 35.0%
!! TTTCTATTTGCAGTGGATTG+AGG + chr3_1:52586228-52586247 Msa0361850:intron 35.0%
TATTTCACACTGTTACAGAC+TGG + chr3_1:52586290-52586309 Msa0361850:CDS 35.0%
CCATCTACAAAGATCAAATG+AGG - chr3_1:52586361-52586380 None:intergenic 35.0%
CCTCATTTGATCTTTGTAGA+TGG + chr3_1:52586358-52586377 Msa0361850:CDS 35.0%
TTTGTGATTCCGATTAGGAA+AGG + chr3_1:52586609-52586628 Msa0361850:intron 35.0%
ATTGAGATGCAACCTAAGAT+CGG + chr3_1:52586730-52586749 Msa0361850:intron 35.0%
GTATGTATGCATGCAAAACA+TGG + chr3_1:52586848-52586867 Msa0361850:intron 35.0%
GTAGTAGTAGTAGATGTAGT+GGG - chr3_1:52587048-52587067 None:intergenic 35.0%
AGAGCTTCACGTAAGAAATA+GGG + chr3_1:52587220-52587239 Msa0361850:intron 35.0%
! CAAACGGCAACATAATTTTG+AGG - chr3_1:52587408-52587427 None:intergenic 35.0%
TCTAACTCAATATGCTCGAA+TGG - chr3_1:52587783-52587802 None:intergenic 35.0%
GAGCATATTGAGTTAGAACA+TGG + chr3_1:52587786-52587805 Msa0361850:intron 35.0%
AGAACATGGTTCTCATTATG+TGG + chr3_1:52587800-52587819 Msa0361850:intron 35.0%
CTTTCTTCTTCACTGCTAAA+TGG + chr3_1:52587826-52587845 Msa0361850:intron 35.0%
! TTTTGATGTCCATATTAGGG+AGG - chr3_1:52587889-52587908 None:intergenic 35.0%
! TTTGACAATTCCCACCATTT+TGG + chr3_1:52587974-52587993 Msa0361850:intron 35.0%
! TTGACAATTCCCACCATTTT+GGG + chr3_1:52587975-52587994 Msa0361850:intron 35.0%
CCTAATGTGGACATAAGAAA+AGG - chr3_1:52588015-52588034 None:intergenic 35.0%
! CCTTTTCTTATGTCCACATT+AGG + chr3_1:52588012-52588031 Msa0361850:intron 35.0%
! TTAGGGTACCCTAAGAAATA+AGG + chr3_1:52588030-52588049 Msa0361850:intron 35.0%
! TAGGGTACCCTAAGAAATAA+GGG + chr3_1:52588031-52588050 Msa0361850:intron 35.0%
!! CTTCTTAGTTTGATTTGCCT+TGG + chr3_1:52588204-52588223 Msa0361850:intron 35.0%
ATTATCAACGAATTCTGCCA+AGG - chr3_1:52588224-52588243 None:intergenic 35.0%
AAGTGGAGCCTGAAAAATAT+TGG - chr3_1:52588260-52588279 None:intergenic 35.0%
ATGACGAAAACATACTGTTC+CGG - chr3_1:52588335-52588354 None:intergenic 35.0%
TCATGCTATTCTTTCACCTT+TGG + chr3_1:52588351-52588370 Msa0361850:CDS 35.0%
CATGCTATTCTTTCACCTTT+GGG + chr3_1:52588352-52588371 Msa0361850:CDS 35.0%
TATGAGACTGCTCTCTTTAA+AGG + chr3_1:52588376-52588395 Msa0361850:CDS 35.0%
ATGAGACTGCTCTCTTTAAA+GGG + chr3_1:52588377-52588396 Msa0361850:CDS 35.0%
!!! ACGTGCAGTTTTTTCGTTAT+CGG - chr3_1:52588458-52588477 None:intergenic 35.0%
CTGAGTTTGGAGAAATGATT+AGG + chr3_1:52588482-52588501 Msa0361850:CDS 35.0%
! GAAATGATTAGGGCATCATT+TGG + chr3_1:52588493-52588512 Msa0361850:CDS 35.0%
CCAACATGGTGTAAGTTTAA+AGG - chr3_1:52588523-52588542 None:intergenic 35.0%
CCTTTAAACTTACACCATGT+TGG + chr3_1:52588520-52588539 Msa0361850:CDS 35.0%
TGAATCAAGACTAAGTAACG+AGG + chr3_1:52588624-52588643 Msa0361850:CDS 35.0%
AATTGGGCGTCTAATTACAA+AGG + chr3_1:52588670-52588689 Msa0361850:CDS 35.0%
ATTGGGCGTCTAATTACAAA+GGG + chr3_1:52588671-52588690 Msa0361850:CDS 35.0%
ATCATGCAATTAACCTTGAC+GGG + chr3_1:52588908-52588927 Msa0361850:CDS 35.0%
ATTGATCACAGTTTCAGGAT+TGG - chr3_1:52588941-52588960 None:intergenic 35.0%
TTCAAAACACTCAACATCGA+AGG - chr3_1:52588987-52589006 None:intergenic 35.0%
! TGGAATTGCTGATAACTTGT+TGG + chr3_1:52589108-52589127 Msa0361850:three_prime_UTR 35.0%
AATTGCAGAGTTCAGTGAAA+AGG + chr3_1:52589188-52589207 Msa0361850:three_prime_UTR 35.0%
ATTGCAGAGTTCAGTGAAAA+GGG + chr3_1:52589189-52589208 Msa0361850:three_prime_UTR 35.0%
CCTCATCTGTATACAACATA+GGG - chr3_1:52589316-52589335 None:intergenic 35.0%
CCTATGTTGTATACAGATGA+GGG + chr3_1:52589314-52589333 Msa0361850:three_prime_UTR 35.0%
CTATGTTGTATACAGATGAG+GGG + chr3_1:52589315-52589334 Msa0361850:three_prime_UTR 35.0%
GAGAGAAGCTATGAACAAGA+AGG + chr3_1:52582592-52582611 Msa0361850:exon 40.0%
GAAGTAAAGACAGAGAGAGA+AGG - chr3_1:52582651-52582670 None:intergenic 40.0%
TAGGGTTTAGAAAAGAAGGG+TGG - chr3_1:52582679-52582698 None:intergenic 40.0%
GGTGTAGGGTTTAGAAAAGA+AGG - chr3_1:52582683-52582702 None:intergenic 40.0%
!! TTGATGTCAGGATTTGGTGA+TGG - chr3_1:52582704-52582723 None:intergenic 40.0%
TCTATAAAGGGTCGTCGAAA+AGG - chr3_1:52582746-52582765 None:intergenic 40.0%
GGTGAATAAGAGGGTAGAAT+TGG - chr3_1:52582800-52582819 None:intergenic 40.0%
TTCTACCCTCTTATTCACCA+TGG + chr3_1:52582801-52582820 Msa0361850:CDS 40.0%
TGTGACCATGGTGAATAAGA+GGG - chr3_1:52582809-52582828 None:intergenic 40.0%
TTGTGACCATGGTGAATAAG+AGG - chr3_1:52582810-52582829 None:intergenic 40.0%
GAATTTGAAGGTTGTGACCA+TGG - chr3_1:52582821-52582840 None:intergenic 40.0%
! AGGTCATGTGAGGGTTATTT+TGG + chr3_1:52582851-52582870 Msa0361850:CDS 40.0%
GTTGGTATAGTGAGACATTG+AGG + chr3_1:52582945-52582964 Msa0361850:CDS 40.0%
TTGAGGAGTTCAGTTTGTGA+AGG + chr3_1:52582962-52582981 Msa0361850:CDS 40.0%
GGAGAGGATAAAAATGGCAA+AGG + chr3_1:52583006-52583025 Msa0361850:CDS 40.0%
AGGATAAAAATGGCAAAGGG+TGG + chr3_1:52583010-52583029 Msa0361850:CDS 40.0%
TATTGGAAGAAGTGAAGAGG+AGG + chr3_1:52583051-52583070 Msa0361850:CDS 40.0%
! AAAGCACCATCCTCAAACAA+AGG - chr3_1:52583082-52583101 None:intergenic 40.0%
!! TTGATGAGGGGTTTTTGGAT+AGG + chr3_1:52583146-52583165 Msa0361850:CDS 40.0%
TTGGATAGGTATGTTCCTAG+AGG + chr3_1:52583160-52583179 Msa0361850:CDS 40.0%
TGGATAGGTATGTTCCTAGA+GGG + chr3_1:52583161-52583180 Msa0361850:CDS 40.0%
GTAAGATGAAGGTTGTTGGA+AGG + chr3_1:52583218-52583237 Msa0361850:CDS 40.0%
AGTTGGGTGTTTATGGTTGT+TGG + chr3_1:52583675-52583694 Msa0361850:intron 40.0%
! GGTGTTTATGGTTGTTGGTT+AGG + chr3_1:52583680-52583699 Msa0361850:intron 40.0%
CTTCTGATCAGGTAAGGTTT+AGG + chr3_1:52583984-52584003 Msa0361850:intron 40.0%
TCAGTTGGGTGTTTATGGTT+TGG + chr3_1:52583673-52583692 Msa0361850:intron 40.0%
!! TGGGTGTTTATGGTTTGGTT+TGG + chr3_1:52584065-52584084 Msa0361850:intron 40.0%
AAAACTCTTTCAACTGACCG+TGG - chr3_1:52584105-52584124 None:intergenic 40.0%
TTCGAATCAGTGCTTGGATT+TGG + chr3_1:52584424-52584443 Msa0361850:intron 40.0%
!! TTTCTCTTTTAAGAGGTGGG+TGG + chr3_1:52584542-52584561 Msa0361850:intron 40.0%
!! TTCTCTTTTAAGAGGTGGGT+GGG + chr3_1:52584543-52584562 Msa0361850:intron 40.0%
TGGGTGGGATACTTATCTTT+CGG + chr3_1:52584558-52584577 Msa0361850:intron 40.0%
TCTTTCGGATCGACCTTATA+TGG + chr3_1:52584573-52584592 Msa0361850:intron 40.0%
AATTAAGAATGCAGCCAGCT+AGG + chr3_1:52584774-52584793 Msa0361850:intron 40.0%
ATTAAGAATGCAGCCAGCTA+GGG + chr3_1:52584775-52584794 Msa0361850:intron 40.0%
GATGGCTAATATCTGGTTAG+AGG + chr3_1:52584797-52584816 Msa0361850:intron 40.0%
CAGAAACTCGAAGAAGTTAC+AGG - chr3_1:52584966-52584985 None:intergenic 40.0%
AAATTGGCATCTCAATCCCT+AGG + chr3_1:52585201-52585220 Msa0361850:intron 40.0%
!! CAGTTTTCTCGGTTTTGATG+AGG - chr3_1:52585264-52585283 None:intergenic 40.0%
AATCAATGTGGGGAGAAGAT+GGG - chr3_1:52585325-52585344 None:intergenic 40.0%
AAATCAATGTGGGGAGAAGA+TGG - chr3_1:52585326-52585345 None:intergenic 40.0%
GAGAACAGGAAATCAATGTG+GGG - chr3_1:52585335-52585354 None:intergenic 40.0%
GGAGAACAGGAAATCAATGT+GGG - chr3_1:52585336-52585355 None:intergenic 40.0%
AGGAGAACAGGAAATCAATG+TGG - chr3_1:52585337-52585356 None:intergenic 40.0%
TGACAATTGATGAAGGTCTG+GGG - chr3_1:52585364-52585383 None:intergenic 40.0%
CATGACAATTGATGAAGGTC+TGG - chr3_1:52585366-52585385 None:intergenic 40.0%
GAGAGGAATAAGTTTGCAGA+GGG + chr3_1:52585444-52585463 Msa0361850:intron 40.0%
CTTAACTCATTGAGTCTTCG+TGG - chr3_1:52585483-52585502 None:intergenic 40.0%
! AGTGTGCTGATATTTGGCTA+AGG + chr3_1:52585527-52585546 Msa0361850:intron 40.0%
! ATTCTCCCTTTTCTGGGTTT+AGG - chr3_1:52585653-52585672 None:intergenic 40.0%
AGCTATGTCATGACTCATGT+CGG + chr3_1:52585707-52585726 Msa0361850:intron 40.0%
AAGCACAATAACAGCCACAT+AGG + chr3_1:52585762-52585781 Msa0361850:intron 40.0%
!! TTTTTGGCAGAATACACCGA+GGG - chr3_1:52585931-52585950 None:intergenic 40.0%
! ACGAGGTTTTCTATTTGCAG+TGG + chr3_1:52586221-52586240 Msa0361850:intron 40.0%
CTTTGTAGATGGACACTGTA+AGG + chr3_1:52586369-52586388 Msa0361850:CDS 40.0%
!! GAGGTTTTGTGATTCCGATT+AGG + chr3_1:52586604-52586623 Msa0361850:intron 40.0%
CTCAACGATCCTTTCCTAAT+CGG - chr3_1:52586621-52586640 None:intergenic 40.0%
GGTAGTAGTAGTAGATGTAG+TGG - chr3_1:52587049-52587068 None:intergenic 40.0%
ACTACTACTACCATCAGCTT+TGG + chr3_1:52587057-52587076 Msa0361850:intron 40.0%
TGAGAGAACAAGAAAGAGAC+AGG + chr3_1:52587112-52587131 Msa0361850:intron 40.0%
GAGAGAACAAGAAAGAGACA+GGG + chr3_1:52587113-52587132 Msa0361850:intron 40.0%
TGAGAGATTGGAGAACATAG+TGG + chr3_1:52587167-52587186 Msa0361850:intron 40.0%
TAAATCGCAAGAGAGAGACA+TGG + chr3_1:52587194-52587213 Msa0361850:intron 40.0%
GAGAGCTTCACGTAAGAAAT+AGG + chr3_1:52587219-52587238 Msa0361850:intron 40.0%
! GAGTATTCAGGTCTAGTTCA+CGG - chr3_1:52587290-52587309 None:intergenic 40.0%
TGATGGAAGAATTTGACCAG+TGG - chr3_1:52587533-52587552 None:intergenic 40.0%
ACACATCACATCTTCCTTCT+TGG + chr3_1:52587626-52587645 Msa0361850:intron 40.0%
ATCACATCTTCCTTCTTGGT+TGG + chr3_1:52587630-52587649 Msa0361850:intron 40.0%
CATCAAAAAAAGGGGTCTGT+AGG + chr3_1:52587901-52587920 Msa0361850:intron 40.0%
ACATAAGAAAAGGGGTCCAA+AGG - chr3_1:52588005-52588024 None:intergenic 40.0%
! TTTCTTAGGGTACCCTAATG+TGG - chr3_1:52588028-52588047 None:intergenic 40.0%
! TGCTCTCTTTAAAGGGCTAA+CGG + chr3_1:52588384-52588403 Msa0361850:CDS 40.0%
!!! CGTGCAGTTTTTTCGTTATC+GGG - chr3_1:52588457-52588476 None:intergenic 40.0%
! ACTGCACGTATTTCTGAGTT+TGG + chr3_1:52588469-52588488 Msa0361850:CDS 40.0%
!! CAGAGACTTGTTTTCCAACA+TGG - chr3_1:52588537-52588556 None:intergenic 40.0%
CATGTTGGAAAACAAGTCTC+TGG + chr3_1:52588535-52588554 Msa0361850:CDS 40.0%
AATCTTCACGACGAACAAAC+AGG - chr3_1:52588573-52588592 None:intergenic 40.0%
! TATTTAGCTCATCCACGTCA+CGG + chr3_1:52588592-52588611 Msa0361850:CDS 40.0%
ATTAGACGCCCAATTGTTCA+AGG - chr3_1:52588665-52588684 None:intergenic 40.0%
ACACATGTCTATGAAGGAAC+AGG + chr3_1:52588726-52588745 Msa0361850:CDS 40.0%
TGTCTATGAAGGAACAGGTA+CGG + chr3_1:52588731-52588750 Msa0361850:CDS 40.0%
CAAGATGCATCTGTGATCAT+TGG + chr3_1:52588760-52588779 Msa0361850:CDS 40.0%
AGATTATTAGCAGCCAGTTC+AGG + chr3_1:52588842-52588861 Msa0361850:CDS 40.0%
GCTCAGTAACCAAACCAATT+TGG - chr3_1:52589085-52589104 None:intergenic 40.0%
!! TGGTTTGGTTACTGAGCTAA+TGG + chr3_1:52589088-52589107 Msa0361850:three_prime_UTR 40.0%
TTGCAGAGTTCAGTGAAAAG+GGG + chr3_1:52589190-52589209 Msa0361850:three_prime_UTR 40.0%
TAGGGTCAAGGATCAAATGA+AGG - chr3_1:52589298-52589317 None:intergenic 40.0%
CTGTATACAACATAGGGTCA+AGG - chr3_1:52589310-52589329 None:intergenic 40.0%
CCCTATGTTGTATACAGATG+AGG + chr3_1:52589313-52589332 Msa0361850:three_prime_UTR 40.0%
CCCTCATCTGTATACAACAT+AGG - chr3_1:52589317-52589336 None:intergenic 40.0%
!! CAGGATTTGGTGATGGTGTA+GGG - chr3_1:52582697-52582716 None:intergenic 45.0%
!! TCAGGATTTGGTGATGGTGT+AGG - chr3_1:52582698-52582717 None:intergenic 45.0%
TAAGAGGGTAGAATTGGCCA+TGG - chr3_1:52582794-52582813 None:intergenic 45.0%
AACTCCACTAAGGTCATGTG+AGG + chr3_1:52582841-52582860 Msa0361850:CDS 45.0%
ACTCCACTAAGGTCATGTGA+GGG + chr3_1:52582842-52582861 Msa0361850:CDS 45.0%
TAACCCTCACATGACCTTAG+TGG - chr3_1:52582848-52582867 None:intergenic 45.0%
AGGAGTTCAGTTTGTGAAGG+TGG + chr3_1:52582965-52582984 Msa0361850:CDS 45.0%
GGAGTTCAGTTTGTGAAGGT+GGG + chr3_1:52582966-52582985 Msa0361850:CDS 45.0%
TTCAGTTTGTGAAGGTGGGA+GGG + chr3_1:52582970-52582989 Msa0361850:CDS 45.0%
!! GGTGGTGGAGAGGATAAAAA+TGG + chr3_1:52583000-52583019 Msa0361850:CDS 45.0%
GAGAGTTTGGGGGATGTTAT+TGG + chr3_1:52583034-52583053 Msa0361850:CDS 45.0%
! GAGTTGCCTTTGTTTGAGGA+TGG + chr3_1:52583073-52583092 Msa0361850:CDS 45.0%
! GTTTGAGGATGGTGCTTTTG+AGG + chr3_1:52583084-52583103 Msa0361850:CDS 45.0%
!!! GATGGTGCTTTTGAGGTTGA+TGG + chr3_1:52583091-52583110 Msa0361850:CDS 45.0%
!! TTTGAGGTTGATGGTGGTGT+AGG + chr3_1:52583100-52583119 Msa0361850:CDS 45.0%
!! TTGAGGTTGATGGTGGTGTA+GGG + chr3_1:52583101-52583120 Msa0361850:CDS 45.0%
GTGGTGTAGGGTTTGAAAGA+GGG + chr3_1:52583113-52583132 Msa0361850:CDS 45.0%
AGGGTTTGAAAGAGGGAAGA+TGG + chr3_1:52583120-52583139 Msa0361850:CDS 45.0%
AGGGAAGATGGTTGTTGATG+AGG + chr3_1:52583132-52583151 Msa0361850:CDS 45.0%
! GGGAAGATGGTTGTTGATGA+GGG + chr3_1:52583133-52583152 Msa0361850:CDS 45.0%
! GGAAGATGGTTGTTGATGAG+GGG + chr3_1:52583134-52583153 Msa0361850:CDS 45.0%
!! GGTTGTTGATGAGGGGTTTT+TGG + chr3_1:52583141-52583160 Msa0361850:CDS 45.0%
GGATAGGTATGTTCCTAGAG+GGG + chr3_1:52583162-52583181 Msa0361850:CDS 45.0%
TGTCTCATAATCTCCCCTCT+AGG - chr3_1:52583178-52583197 None:intergenic 45.0%
! TGGTTAGTTGTTGGGGTGAA+AGG + chr3_1:52583517-52583536 Msa0361850:intron 45.0%
! TGGTTAGTTGTTGGGGTGAA+TGG + chr3_1:52583517-52583536 Msa0361850:intron 45.0%
GGGTGAATGGAATTGTTGTC+AGG + chr3_1:52583868-52583887 Msa0361850:intron 45.0%
TTCGGATCGACCTTATATGG+CGG + chr3_1:52584576-52584595 Msa0361850:intron 45.0%
ATATCCCATGCCGCCATATA+AGG - chr3_1:52584589-52584608 None:intergenic 45.0%
! ATGGCGGCATGGGATATTTT+TGG + chr3_1:52584592-52584611 Msa0361850:intron 45.0%
AGATATTAGCCATCCCTAGC+TGG - chr3_1:52584791-52584810 None:intergenic 45.0%
AGCTAGGGATGGCTAATATC+TGG + chr3_1:52584790-52584809 Msa0361850:intron 45.0%
CAGGGCATGACAATTGATGA+AGG - chr3_1:52585371-52585390 None:intergenic 45.0%
CTTCATCAATTGTCATGCCC+TGG + chr3_1:52585369-52585388 Msa0361850:intron 45.0%
AAAAGCTAGTGAAGAGCGAG+AGG + chr3_1:52585427-52585446 Msa0361850:intron 45.0%
CGAGAGGAATAAGTTTGCAG+AGG + chr3_1:52585443-52585462 Msa0361850:intron 45.0%
!! CTTTTTGGCAGAATACACCG+AGG - chr3_1:52585932-52585951 None:intergenic 45.0%
! CTCGGTGTATTCTGCCAAAA+AGG + chr3_1:52585930-52585949 Msa0361850:intron 45.0%
GATTGAGGAACCAACACTTC+TGG + chr3_1:52586243-52586262 Msa0361850:CDS 45.0%
AAGATCAAATGAGGCCGACT+AGG - chr3_1:52586352-52586371 None:intergenic 45.0%
AGGAAAGGATCGTTGAGATC+TGG + chr3_1:52586624-52586643 Msa0361850:intron 45.0%
TGAGATCTGGAGAGTTCGAA+AGG + chr3_1:52586637-52586656 Msa0361850:intron 45.0%
ATGCAACCTAAGATCGGAGA+GGG + chr3_1:52586736-52586755 Msa0361850:intron 45.0%
! TAGTAGATGTAGTGGGACAG+GGG - chr3_1:52587041-52587060 None:intergenic 45.0%
! GTAGTAGATGTAGTGGGACA+GGG - chr3_1:52587042-52587061 None:intergenic 45.0%
! AGTAGTAGATGTAGTGGGAC+AGG - chr3_1:52587043-52587062 None:intergenic 45.0%
TTGTTCTCTCATCTTGCACG+CGG - chr3_1:52587103-52587122 None:intergenic 45.0%
GTTGCAAGCAACAAAGCAGA+GGG + chr3_1:52587135-52587154 Msa0361850:intron 45.0%
GGGAAGTGAGAATGAGAGAT+TGG + chr3_1:52587155-52587174 Msa0361850:intron 45.0%
TTCTGCTGATGCGAGTATTC+AGG - chr3_1:52587302-52587321 None:intergenic 45.0%
!!! ATGCTACATTTTGGCTAGGG+AGG + chr3_1:52587375-52587394 Msa0361850:intron 45.0%
!!! AGACTGAGGCCTTTTAGCTT+GGG + chr3_1:52587432-52587451 Msa0361850:intron 45.0%
TCTTCACCTCCCAAGCTAAA+AGG - chr3_1:52587444-52587463 None:intergenic 45.0%
!! TCCTTCTTGGTTGGTTTCCA+AGG + chr3_1:52587639-52587658 Msa0361850:intron 45.0%
ACCTTGGAAACCAACCAAGA+AGG - chr3_1:52587643-52587662 None:intergenic 45.0%
! CATTTAGGGCCTCCCTAATA+TGG + chr3_1:52587877-52587896 Msa0361850:intron 45.0%
CAAAAAAAGGGGTCTGTAGG+TGG + chr3_1:52587904-52587923 Msa0361850:intron 45.0%
AAAGGTGGACCCAAAATGGT+GGG - chr3_1:52587987-52588006 None:intergenic 45.0%
TAAGAAAAGGGGTCCAAAGG+TGG - chr3_1:52588002-52588021 None:intergenic 45.0%
GCTTTCCATGTCTCTTCAAG+TGG - chr3_1:52588277-52588296 None:intergenic 45.0%
AGAGCAGTCTCATATCCCAA+AGG - chr3_1:52588370-52588389 None:intergenic 45.0%
GAGCTTCTGCACAAGAATTG+TGG + chr3_1:52588425-52588444 Msa0361850:CDS 45.0%
GTTGGAAAACAAGTCTCTGG+AGG + chr3_1:52588538-52588557 Msa0361850:CDS 45.0%
GTTCGCACACATGTCTATGA+AGG + chr3_1:52588720-52588739 Msa0361850:CDS 45.0%
GTCTATGAAGGAACAGGTAC+GGG + chr3_1:52588732-52588751 Msa0361850:CDS 45.0%
TCTGTGATCATTGGTGCACA+TGG + chr3_1:52588769-52588788 Msa0361850:CDS 45.0%
! ATTTTGCGTACATTGCGCGA+TGG + chr3_1:52588872-52588891 Msa0361850:CDS 45.0%
! AGCGCATTGATCACAGTTTC+AGG - chr3_1:52588946-52588965 None:intergenic 45.0%
TGAAACTGTGATCAATGCGC+TGG + chr3_1:52588945-52588964 Msa0361850:CDS 45.0%
!!! GTTTTTATTTTATTTTATTT+TGG + chr3_1:52583948-52583967 Msa0361850:intron 5.0%
!!! TTTAATTTAATTTTATGTTT+TGG - chr3_1:52586068-52586087 None:intergenic 5.0%
!! AAAACATAAAATTAAATTAA+AGG + chr3_1:52586067-52586086 Msa0361850:intron 5.0%
GAGAGAGAGAGAGAGAGAGT+AGG + chr3_1:52582564-52582583 Msa0361850:five_prime_UTR 50.0%
! TGGAAATGGATTCACGCGCT+TGG + chr3_1:52582871-52582890 Msa0361850:CDS 50.0%
!! GTTGATGTGTTTTCGAGCCG+CGG + chr3_1:52582893-52582912 Msa0361850:CDS 50.0%
GTTCAGTTTGTGAAGGTGGG+AGG + chr3_1:52582969-52582988 Msa0361850:CDS 50.0%
GCAAAGGGTGGTGAGAGTTT+GGG + chr3_1:52583022-52583041 Msa0361850:CDS 50.0%
CAAAGGGTGGTGAGAGTTTG+GGG + chr3_1:52583023-52583042 Msa0361850:CDS 50.0%
AAAGGGTGGTGAGAGTTTGG+GGG + chr3_1:52583024-52583043 Msa0361850:CDS 50.0%
! GGAGGAGTTGCCTTTGTTTG+AGG + chr3_1:52583069-52583088 Msa0361850:CDS 50.0%
!!! GGTGCTTTTGAGGTTGATGG+TGG + chr3_1:52583094-52583113 Msa0361850:CDS 50.0%
GGTGGTGTAGGGTTTGAAAG+AGG + chr3_1:52583112-52583131 Msa0361850:CDS 50.0%
ATCGACCTTATATGGCGGCA+TGG + chr3_1:52584581-52584600 Msa0361850:intron 50.0%
TCGACCTTATATGGCGGCAT+GGG + chr3_1:52584582-52584601 Msa0361850:intron 50.0%
AGAGATTGGAGGGAACGTGA+AGG + chr3_1:52584697-52584716 Msa0361850:intron 50.0%
GAGATTGGAGGGAACGTGAA+GGG + chr3_1:52584698-52584717 Msa0361850:intron 50.0%
AGATTGGAGGGAACGTGAAG+GGG + chr3_1:52584699-52584718 Msa0361850:intron 50.0%
! TGATGAAGGTCTGGGGTTTG+AGG - chr3_1:52585357-52585376 None:intergenic 50.0%
! AAGCGTGTCACCAGAAGTGT+TGG - chr3_1:52586256-52586275 None:intergenic 50.0%
!! GAGTTACTGGCTTGCCTAGT+CGG + chr3_1:52586335-52586354 Msa0361850:CDS 50.0%
GATGCAACCTAAGATCGGAG+AGG + chr3_1:52586735-52586754 Msa0361850:intron 50.0%
TGCAACCTAAGATCGGAGAG+GGG + chr3_1:52586737-52586756 Msa0361850:intron 50.0%
GGTTGCAAGCAACAAAGCAG+AGG + chr3_1:52587134-52587153 Msa0361850:intron 50.0%
! TTGCCGTTTGTAGGAGACTG+AGG + chr3_1:52587418-52587437 Msa0361850:intron 50.0%
AGGCCTCAGTCTCCTACAAA+CGG - chr3_1:52587424-52587443 None:intergenic 50.0%
!! GAGACTGAGGCCTTTTAGCT+TGG + chr3_1:52587431-52587450 Msa0361850:intron 50.0%
CAAAGGTGGACCCAAAATGG+TGG - chr3_1:52587988-52588007 None:intergenic 50.0%
!! CACCATTTTGGGTCCACCTT+TGG + chr3_1:52587986-52588005 Msa0361850:intron 50.0%
GTCCAAAGGTGGACCCAAAA+TGG - chr3_1:52587991-52588010 None:intergenic 50.0%
AGGCTCCACTTGAAGAGACA+TGG + chr3_1:52588269-52588288 Msa0361850:intron 50.0%
! TCAACTTTTCCACCGTGACG+TGG - chr3_1:52588607-52588626 None:intergenic 50.0%
GTGCGAACAATCCGTTGACA+AGG - chr3_1:52588708-52588727 None:intergenic 50.0%
ATCATTGGTGCACATGGTGC+TGG + chr3_1:52588775-52588794 Msa0361850:CDS 50.0%
CAAAATGTGGACGCCTGAAC+TGG - chr3_1:52588858-52588877 None:intergenic 50.0%
CGCGCAATGTACGCAAAATG+TGG - chr3_1:52588871-52588890 None:intergenic 50.0%
CGTACATTGCGCGATGGAAA+GGG + chr3_1:52588878-52588897 Msa0361850:CDS 50.0%
! CCAGGTACTGTCAACAACTC+AGG - chr3_1:52589256-52589275 None:intergenic 50.0%
CCTGAGTTGTTGACAGTACC+TGG + chr3_1:52589253-52589272 Msa0361850:three_prime_UTR 50.0%
ACAGTACCTGGTGCAGTATG+TGG + chr3_1:52589265-52589284 Msa0361850:three_prime_UTR 50.0%
GAAGAGGAGGTGGGTGGTTT+AGG + chr3_1:52582921-52582940 Msa0361850:CDS 55.0%
GAGGTGGGTGGTTTAGGTGT+TGG + chr3_1:52582927-52582946 Msa0361850:CDS 55.0%
TTTGTGAAGGTGGGAGGGTG+AGG + chr3_1:52582975-52582994 Msa0361850:CDS 55.0%
GGCAAAGGGTGGTGAGAGTT+TGG + chr3_1:52583021-52583040 Msa0361850:CDS 55.0%
AGAATGCAGCCAGCTAGGGA+TGG + chr3_1:52584779-52584798 Msa0361850:intron 55.0%
! GTCTGGGGTTTGAGGAGAAC+AGG - chr3_1:52585349-52585368 None:intergenic 55.0%
GCAACCTAAGATCGGAGAGG+GGG + chr3_1:52586738-52586757 Msa0361850:intron 55.0%
TGGTTGTGGGCCAAAGCTGA+TGG - chr3_1:52587070-52587089 None:intergenic 55.0%
!!! CTGAGGCCTTTTAGCTTGGG+AGG + chr3_1:52587435-52587454 Msa0361850:intron 55.0%
TTAGCTCATCCACGTCACGG+TGG + chr3_1:52588595-52588614 Msa0361850:CDS 55.0%
GCGTACATTGCGCGATGGAA+AGG + chr3_1:52588877-52588896 Msa0361850:CDS 55.0%
CATTGCGCGATGGAAAGGGT+TGG + chr3_1:52588882-52588901 Msa0361850:CDS 55.0%
GATTGGCATACGACCCGTCA+AGG - chr3_1:52588924-52588943 None:intergenic 55.0%
ACCTGGTGCAGTATGTGGCA+TGG + chr3_1:52589270-52589289 Msa0361850:three_prime_UTR 55.0%
ACCATGCCACATACTGCACC+AGG - chr3_1:52589274-52589293 None:intergenic 55.0%
TGAAGGTGGGAGGGTGAGGA+TGG + chr3_1:52582979-52582998 Msa0361850:CDS 60.0%
! CGAGGGCATGGCCAGTTACA+CGG - chr3_1:52585914-52585933 None:intergenic 60.0%
CGTGTAACTGGCCATGCCCT+CGG + chr3_1:52585912-52585931 Msa0361850:intron 60.0%
GGCAGAATACACCGAGGGCA+TGG - chr3_1:52585926-52585945 None:intergenic 60.0%
GCTACCCCCTCTCCGATCTT+AGG - chr3_1:52586745-52586764 None:intergenic 60.0%
! TGTAGTGGGACAGGGGCTAG+TGG - chr3_1:52587034-52587053 None:intergenic 60.0%
TGGCCCACAACCAGAAGCCA+TGG + chr3_1:52587077-52587096 Msa0361850:intron 60.0%
! CGGCCATGGCTTCTGGTTGT+GGG - chr3_1:52587083-52587102 None:intergenic 60.0%
TCTCATCTTGCACGCGGCCA+TGG - chr3_1:52587097-52587116 None:intergenic 60.0%
!! GTGTTTTCGAGCCGCGGCGA+TGG + chr3_1:52582899-52582918 Msa0361850:CDS 65.0%
CACCTCCTCTTCCATCGCCG+CGG - chr3_1:52582913-52582932 None:intergenic 65.0%
GCGGCGATGGAAGAGGAGGT+GGG + chr3_1:52582912-52582931 Msa0361850:CDS 65.0%
GCGATGGAAGAGGAGGTGGG+TGG + chr3_1:52582915-52582934 Msa0361850:CDS 65.0%
AGGTGGGAGGGTGAGGATGG+TGG + chr3_1:52582982-52583001 Msa0361850:CDS 65.0%
! TGGGAGGGTGAGGATGGTGG+TGG + chr3_1:52582985-52583004 Msa0361850:CDS 65.0%
!! GGGTGAGGATGGTGGTGGAG+AGG + chr3_1:52582990-52583009 Msa0361850:CDS 65.0%
! GCGGCCATGGCTTCTGGTTG+TGG - chr3_1:52587084-52587103 None:intergenic 65.0%
TTGCACGCGGCCATGGCTTC+TGG - chr3_1:52587090-52587109 None:intergenic 65.0%
TCGAGCCGCGGCGATGGAAG+AGG + chr3_1:52582905-52582924 Msa0361850:CDS 70.0%
AGCCGCGGCGATGGAAGAGG+AGG + chr3_1:52582908-52582927 Msa0361850:CDS 70.0%
CGCGGCGATGGAAGAGGAGG+TGG + chr3_1:52582911-52582930 Msa0361850:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 52582504 52589494 52582504 ID=Msa0361850;Name=Msa0361850
chr3_1 mRNA 52582504 52589494 52582504 ID=Msa0361850-mRNA-1;Parent=Msa0361850;Name=Msa0361850-mRNA-1;_AED=0.00;_eAED=0.00;_QI=98|1|1|1|1|1|3|498|511
chr3_1 exon 52582504 52583261 52582504 ID=Msa0361850-mRNA-1:exon:9487;Parent=Msa0361850-mRNA-1
chr3_1 exon 52586241 52586390 52586241 ID=Msa0361850-mRNA-1:exon:9488;Parent=Msa0361850-mRNA-1
chr3_1 exon 52588271 52589494 52588271 ID=Msa0361850-mRNA-1:exon:9489;Parent=Msa0361850-mRNA-1
chr3_1 five_prime_UTR 52582504 52582601 52582504 ID=Msa0361850-mRNA-1:five_prime_utr;Parent=Msa0361850-mRNA-1
chr3_1 CDS 52582602 52583261 52582602 ID=Msa0361850-mRNA-1:cds;Parent=Msa0361850-mRNA-1
chr3_1 CDS 52586241 52586390 52586241 ID=Msa0361850-mRNA-1:cds;Parent=Msa0361850-mRNA-1
chr3_1 CDS 52588271 52588996 52588271 ID=Msa0361850-mRNA-1:cds;Parent=Msa0361850-mRNA-1
chr3_1 three_prime_UTR 52588997 52589494 52588997 ID=Msa0361850-mRNA-1:three_prime_utr;Parent=Msa0361850-mRNA-1
Gene Sequence

>Msa0361850

ATGAACAAGAAGGTTCAGATCCTACTATTCCTTTTCATCTTCAACTCCTTCTCTCTCTGTCTTTACTTCATACACCACCCTTCTTTTCTAAACCCTACACCATCACCAAATCCTGACATCAAAATTTTCACTAAAGATTCACCTTTTCGACGACCCTTTATAGAGAAACACAAAACCCATATCTTAAAACCATGGCCAATTCTACCCTCTTATTCACCATGGTCACAACCTTCAAATTCAACTCCACTAAGGTCATGTGAGGGTTATTTTGGAAATGGATTCACGCGCTTGGTTGATGTGTTTTCGAGCCGCGGCGATGGAAGAGGAGGTGGGTGGTTTAGGTGTTGGTATAGTGAGACATTGAGGAGTTCAGTTTGTGAAGGTGGGAGGGTGAGGATGGTGGTGGAGAGGATAAAAATGGCAAAGGGTGGTGAGAGTTTGGGGGATGTTATTGGAAGAAGTGAAGAGGAGGAGTTGCCTTTGTTTGAGGATGGTGCTTTTGAGGTTGATGGTGGTGTAGGGTTTGAAAGAGGGAAGATGGTTGTTGATGAGGGGTTTTTGGATAGGTATGTTCCTAGAGGGGAGATTATGAGACATACTATGCGTGATTTGATTGGTAAGATGAAGGTTGTTGGAAGGAAAGAATTTAATTGTGATAAGTGGATTGAGGAACCAACACTTCTGGTGACACGCTTTGAATATGCTAATCTATTTCACACTGTTACAGACTGGTACAGTGCATATGTTTCTTCTAGAGTTACTGGCTTGCCTAGTCGGCCTCATTTGATCTTTGTAGATGGACACTGTAAGGCTCCACTTGAAGAGACATGGAAAGCGCTATTCTCAAGCGTCAGATATGCTAAAAACTTCACCGGAACAGTATGTTTTCGTCATGCTATTCTTTCACCTTTGGGATATGAGACTGCTCTCTTTAAAGGGCTAACGGAAGATATATTTTGCAACGGAGCTTCTGCACAAGAATTGTGGCGAAAACCCGATAACGAAAAAACTGCACGTATTTCTGAGTTTGGAGAAATGATTAGGGCATCATTTGGACTACCTTTAAACTTACACCATGTTGGAAAACAAGTCTCTGGAGGACATAATGTCCTGTTTGTTCGTCGTGAAGATTATTTAGCTCATCCACGTCACGGTGGAAAAGTTGAATCAAGACTAAGTAACGAGGCAGAAGTGTTTGAATCCTTGAACAATTGGGCGTCTAATTACAAAGGGTGTAAAATCAACCTTGTCAACGGATTGTTCGCACACATGTCTATGAAGGAACAGGTACGGGCAATTCAAGATGCATCTGTGATCATTGGTGCACATGGTGCTGGTCTTACTCACATAGTATCTGCATTGCCTAAAACTGTGATTCTAGAGATTATTAGCAGCCAGTTCAGGCGTCCACATTTTGCGTACATTGCGCGATGGAAAGGGTTGGAGTATCATGCAATTAACCTTGACGGGTCGTATGCCAATCCTGAAACTGTGATCAATGCGCTGGTCAGCATAATGAAAAGCCTTCGATGTTGA
Protein sequence

>Msa0361850

MNKKVQILLFLFIFNSFSLCLYFIHHPSFLNPTPSPNPDIKIFTKDSPFRRPFIEKHKTHILKPWPILPSYSPWSQPSNSTPLRSCEGYFGNGFTRLVDVFSSRGDGRGGGWFRCWYSETLRSSVCEGGRVRMVVERIKMAKGGESLGDVIGRSEEEELPLFEDGAFEVDGGVGFERGKMVVDEGFLDRYVPRGEIMRHTMRDLIGKMKVVGRKEFNCDKWIEEPTLLVTRFEYANLFHTVTDWYSAYVSSRVTGLPSRPHLIFVDGHCKAPLEETWKALFSSVRYAKNFTGTVCFRHAILSPLGYETALFKGLTEDIFCNGASAQELWRKPDNEKTARISEFGEMIRASFGLPLNLHHVGKQVSGGHNVLFVRREDYLAHPRHGGKVESRLSNEAEVFESLNNWASNYKGCKINLVNGLFAHMSMKEQVRAIQDASVIIGAHGAGLTHIVSALPKTVILEIISSQFRRPHFAYIARWKGLEYHAINLDGSYANPETVINALVSIMKSLRC*