Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838660 | XP_003612270.1 | 95.676 | 185 | 8 | 0 | 1 | 185 | 1 | 185 | 4.14e-128 | 367 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838660 | sp|Q38853|STR15_ARATH | 58.741 | 143 | 55 | 2 | 47 | 185 | 40 | 182 | 2.91e-55 | 176 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838660 | B7FGV4 | 95.676 | 185 | 8 | 0 | 1 | 185 | 1 | 185 | 1.98e-128 | 367 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0838660 | 0.832536 | 8.940763e-56 | -8.615850e-47 |
| Msa0005160 | Msa0838660 | 0.817045 | 4.041509e-52 | -8.615850e-47 |
| Msa0006820 | Msa0838660 | 0.808265 | 3.371085e-50 | -8.615850e-47 |
| Msa0007450 | Msa0838660 | 0.818242 | 2.171530e-52 | -8.615850e-47 |
| Msa0008850 | Msa0838660 | 0.836690 | 8.069710e-57 | -8.615850e-47 |
| Msa0012460 | Msa0838660 | 0.810051 | 1.396981e-50 | -8.615850e-47 |
| Msa0017120 | Msa0838660 | 0.854113 | 1.527483e-61 | -8.615850e-47 |
| Msa0034340 | Msa0838660 | 0.813508 | 2.470253e-51 | -8.615850e-47 |
| Msa0038310 | Msa0838660 | 0.813980 | 1.944545e-51 | -8.615850e-47 |
| Msa0043680 | Msa0838660 | 0.805113 | 1.561097e-49 | -8.615850e-47 |
| Msa0047470 | Msa0838660 | 0.857035 | 2.146502e-62 | -8.615850e-47 |
| Msa0050500 | Msa0838660 | 0.814257 | 1.689548e-51 | -8.615850e-47 |
| Msa0056040 | Msa0838660 | 0.827764 | 1.306106e-54 | -8.615850e-47 |
| Msa0057740 | Msa0838660 | 0.808834 | 2.549026e-50 | -8.615850e-47 |
| Msa0062750 | Msa0838660 | 0.805695 | 1.178877e-49 | -8.615850e-47 |
| Msa0065390 | Msa0838660 | 0.860036 | 2.731843e-63 | -8.615850e-47 |
| Msa0074760 | Msa0838660 | 0.802129 | 6.493755e-49 | -8.615850e-47 |
| Msa0083160 | Msa0838660 | 0.827371 | 1.623293e-54 | -8.615850e-47 |
| Msa0086090 | Msa0838660 | 0.800363 | 1.492809e-48 | -8.615850e-47 |
| Msa0089210 | Msa0838660 | 0.844943 | 5.526333e-59 | -8.615850e-47 |
| Msa0098700 | Msa0838660 | 0.805940 | 1.047281e-49 | -8.615850e-47 |
| Msa0100250 | Msa0838660 | 0.837557 | 4.844698e-57 | -8.615850e-47 |
| Msa0103060 | Msa0838660 | 0.825802 | 3.842761e-54 | -8.615850e-47 |
| Msa0103780 | Msa0838660 | 0.830444 | 2.926003e-55 | -8.615850e-47 |
| Msa0104420 | Msa0838660 | 0.800698 | 1.275842e-48 | -8.615850e-47 |
| Msa0110710 | Msa0838660 | 0.860916 | 1.478880e-63 | -8.615850e-47 |
| Msa0606060 | Msa0838660 | 0.837770 | 4.272603e-57 | -8.615850e-47 |
| Msa0607280 | Msa0838660 | 0.844225 | 8.623336e-59 | -8.615850e-47 |
| Msa0610280 | Msa0838660 | 0.814313 | 1.641532e-51 | -8.615850e-47 |
| Msa0614230 | Msa0838660 | 0.860145 | 2.532510e-63 | -8.615850e-47 |
| Msa0615850 | Msa0838660 | 0.810476 | 1.131257e-50 | -8.615850e-47 |
| Msa0617120 | Msa0838660 | 0.801702 | 7.949233e-49 | -8.615850e-47 |
| Msa0617830 | Msa0838660 | 0.801052 | 1.080203e-48 | -8.615850e-47 |
| Msa0619330 | Msa0838660 | 0.809457 | 1.874549e-50 | -8.615850e-47 |
| Msa0620750 | Msa0838660 | 0.817978 | 2.491420e-52 | -8.615850e-47 |
| Msa0622390 | Msa0838660 | 0.834301 | 3.243473e-56 | -8.615850e-47 |
| Msa0628060 | Msa0838660 | 0.801559 | 8.505825e-49 | -8.615850e-47 |
| Msa0630970 | Msa0838660 | 0.812697 | 3.720955e-51 | -8.615850e-47 |
| Msa0633860 | Msa0838660 | 0.833772 | 4.401728e-56 | -8.615850e-47 |
| Msa0634420 | Msa0838660 | 0.847130 | 1.404457e-59 | -8.615850e-47 |
| Msa0638710 | Msa0838660 | 0.840916 | 6.518324e-58 | -8.615850e-47 |
| Msa0640880 | Msa0838660 | 0.847193 | 1.350127e-59 | -8.615850e-47 |
| Msa0650650 | Msa0838660 | 0.804982 | 1.663006e-49 | -8.615850e-47 |
| Msa0653710 | Msa0838660 | 0.811849 | 5.698478e-51 | -8.615850e-47 |
| Msa0654060 | Msa0838660 | 0.812395 | 4.332734e-51 | -8.615850e-47 |
| Msa0656680 | Msa0838660 | 0.801229 | 9.937373e-49 | -8.615850e-47 |
| Msa0659040 | Msa0838660 | 0.804862 | 1.761833e-49 | -8.615850e-47 |
| Msa0660820 | Msa0838660 | 0.861195 | 1.216371e-63 | -8.615850e-47 |
| Msa0662860 | Msa0838660 | 0.806047 | 9.945870e-50 | -8.615850e-47 |
| Msa0665910 | Msa0838660 | -0.810631 | 1.046978e-50 | -8.615850e-47 |
| Msa0667970 | Msa0838660 | 0.801378 | 9.264520e-49 | -8.615850e-47 |
| Msa0681890 | Msa0838660 | 0.802875 | 4.557339e-49 | -8.615850e-47 |
| Msa0685520 | Msa0838660 | 0.810159 | 1.324040e-50 | -8.615850e-47 |
| Msa0686610 | Msa0838660 | 0.842636 | 2.290494e-58 | -8.615850e-47 |
| Msa0690720 | Msa0838660 | 0.810917 | 9.081866e-51 | -8.615850e-47 |
| Msa0698900 | Msa0838660 | 0.827440 | 1.562926e-54 | -8.615850e-47 |
| Msa0702070 | Msa0838660 | 0.842365 | 2.703945e-58 | -8.615850e-47 |
| Msa0702120 | Msa0838660 | 0.840721 | 7.330441e-58 | -8.615850e-47 |
| Msa0703460 | Msa0838660 | 0.811318 | 7.434778e-51 | -8.615850e-47 |
| Msa0703720 | Msa0838660 | 0.820607 | 6.274162e-53 | -8.615850e-47 |
| Msa0704570 | Msa0838660 | 0.813584 | 2.377248e-51 | -8.615850e-47 |
| Msa0704990 | Msa0838660 | 0.806657 | 7.397201e-50 | -8.615850e-47 |
| Msa0705030 | Msa0838660 | 0.809084 | 2.253172e-50 | -8.615850e-47 |
| Msa0709480 | Msa0838660 | 0.806406 | 8.356082e-50 | -8.615850e-47 |
| Msa0717510 | Msa0838660 | 0.807706 | 4.433285e-50 | -8.615850e-47 |
| Msa0719340 | Msa0838660 | 0.815592 | 8.542464e-52 | -8.615850e-47 |
| Msa0720270 | Msa0838660 | 0.815164 | 1.063498e-51 | -8.615850e-47 |
| Msa0724050 | Msa0838660 | 0.807066 | 6.061615e-50 | -8.615850e-47 |
| Msa0734000 | Msa0838660 | 0.839780 | 1.291431e-57 | -8.615850e-47 |
| Msa0738850 | Msa0838660 | 0.800880 | 1.170789e-48 | -8.615850e-47 |
| Msa0738860 | Msa0838660 | 0.828732 | 7.634099e-55 | -8.615850e-47 |
| Msa0738870 | Msa0838660 | 0.860179 | 2.473027e-63 | -8.615850e-47 |
| Msa0738880 | Msa0838660 | 0.858023 | 1.094434e-62 | -8.615850e-47 |
| Msa0739610 | Msa0838660 | 0.812180 | 4.827569e-51 | -8.615850e-47 |
| Msa0743640 | Msa0838660 | 0.804041 | 2.613274e-49 | -8.615850e-47 |
| Msa0758820 | Msa0838660 | 0.950224 | 2.558333e-108 | -8.615850e-47 |
| Msa0763880 | Msa0838660 | 0.818145 | 2.283943e-52 | -8.615850e-47 |
| Msa0763910 | Msa0838660 | 0.820508 | 6.609426e-53 | -8.615850e-47 |
| Msa0766880 | Msa0838660 | 0.814801 | 1.280612e-51 | -8.615850e-47 |
| Msa0771960 | Msa0838660 | 0.819058 | 1.417140e-52 | -8.615850e-47 |
| Msa0772150 | Msa0838660 | 0.810336 | 1.212420e-50 | -8.615850e-47 |
| Msa0772210 | Msa0838660 | 0.837249 | 5.809510e-57 | -8.615850e-47 |
| Msa0781490 | Msa0838660 | -0.803441 | 3.481323e-49 | -8.615850e-47 |
| Msa0783270 | Msa0838660 | 0.829431 | 5.167358e-55 | -8.615850e-47 |
| Msa0783280 | Msa0838660 | 0.805460 | 1.320585e-49 | -8.615850e-47 |
| Msa0787720 | Msa0838660 | 0.821711 | 3.490844e-53 | -8.615850e-47 |
| Msa0790830 | Msa0838660 | 0.801720 | 7.882632e-49 | -8.615850e-47 |
| Msa0794130 | Msa0838660 | 0.810377 | 1.187873e-50 | -8.615850e-47 |
| Msa0803130 | Msa0838660 | 0.816065 | 6.701532e-52 | -8.615850e-47 |
| Msa0812660 | Msa0838660 | 0.825954 | 3.537285e-54 | -8.615850e-47 |
| Msa0819320 | Msa0838660 | 0.856053 | 4.171750e-62 | -8.615850e-47 |
| Msa0819330 | Msa0838660 | 0.853885 | 1.777558e-61 | -8.615850e-47 |
| Msa0819360 | Msa0838660 | 0.828311 | 9.649705e-55 | -8.615850e-47 |
| Msa0819370 | Msa0838660 | 0.858322 | 8.918260e-63 | -8.615850e-47 |
| Msa0822370 | Msa0838660 | 0.804172 | 2.453970e-49 | -8.615850e-47 |
| Msa0824770 | Msa0838660 | 0.808685 | 2.743391e-50 | -8.615850e-47 |
| Msa0838630 | Msa0838660 | 0.904194 | 1.583543e-79 | -8.615850e-47 |
| Msa0838660 | Msa0841490 | 0.815796 | 7.692274e-52 | -8.615850e-47 |
| Msa0838660 | Msa0844100 | 0.805646 | 1.207549e-49 | -8.615850e-47 |
| Msa0838660 | Msa0851740 | 0.804448 | 2.149478e-49 | -8.615850e-47 |
| Msa0838660 | Msa0859520 | 0.836978 | 6.816737e-57 | -8.615850e-47 |
| Msa0838660 | Msa0859530 | 0.815918 | 7.226106e-52 | -8.615850e-47 |
| Msa0838660 | Msa0863760 | 0.804219 | 2.399119e-49 | -8.615850e-47 |
| Msa0838660 | Msa0877420 | 0.814414 | 1.559354e-51 | -8.615850e-47 |
| Msa0838660 | Msa0899700 | 0.809165 | 2.165265e-50 | -8.615850e-47 |
| Msa0838660 | Msa0900320 | 0.805599 | 1.235052e-49 | -8.615850e-47 |
| Msa0838660 | Msa0930160 | 0.823704 | 1.200096e-53 | -8.615850e-47 |
| Msa0838660 | Msa0931480 | 0.811621 | 6.388390e-51 | -8.615850e-47 |
| Msa0838660 | Msa0934830 | 0.850118 | 2.087602e-60 | -8.615850e-47 |
| Msa0838660 | Msa0955310 | 0.839621 | 1.420245e-57 | -8.615850e-47 |
| Msa0838660 | Msa0958020 | 0.835200 | 1.927572e-56 | -8.615850e-47 |
| Msa0838660 | Msa0964680 | 0.807468 | 4.980336e-50 | -8.615850e-47 |
| Msa0838660 | Msa0971860 | 0.855763 | 5.072968e-62 | -8.615850e-47 |
| Msa0838660 | Msa0978000 | 0.811997 | 5.291650e-51 | -8.615850e-47 |
| Msa0838660 | Msa0992570 | 0.822838 | 1.912144e-53 | -8.615850e-47 |
| Msa0838660 | Msa0992590 | 0.824882 | 6.344051e-54 | -8.615850e-47 |
| Msa0838660 | Msa1002040 | 0.829973 | 3.813988e-55 | -8.615850e-47 |
| Msa0838660 | Msa1027790 | 0.825830 | 3.784214e-54 | -8.615850e-47 |
| Msa0838660 | Msa1030870 | 0.828906 | 6.928359e-55 | -8.615850e-47 |
| Msa0838660 | Msa1033160 | 0.815740 | 7.918773e-52 | -8.615850e-47 |
| Msa0838660 | Msa1043870 | 0.822401 | 2.415587e-53 | -8.615850e-47 |
| Msa0838660 | Msa1044040 | 0.808793 | 2.601427e-50 | -8.615850e-47 |
| Msa0838660 | Msa1055360 | 0.802901 | 4.502008e-49 | -8.615850e-47 |
| Msa0838660 | Msa1069960 | 0.807218 | 5.626847e-50 | -8.615850e-47 |
| Msa0838660 | Msa1070900 | 0.816363 | 5.749187e-52 | -8.615850e-47 |
| Msa0838660 | Msa1088690 | 0.805313 | 1.417619e-49 | -8.615850e-47 |
| Msa0838660 | Msa1097380 | 0.811696 | 6.153509e-51 | -8.615850e-47 |
| Msa0838660 | Msa1102180 | 0.808675 | 2.756622e-50 | -8.615850e-47 |
| Msa0838660 | Msa1102540 | 0.800235 | 1.584764e-48 | -8.615850e-47 |
| Msa0838660 | Msa1112610 | 0.819756 | 9.828479e-53 | -8.615850e-47 |
| Msa0838660 | Msa1115580 | 0.830446 | 2.923611e-55 | -8.615850e-47 |
| Msa0838660 | Msa1116140 | 0.808382 | 3.183954e-50 | -8.615850e-47 |
| Msa0838660 | Msa1119860 | 0.812381 | 4.363324e-51 | -8.615850e-47 |
| Msa0838660 | Msa1130660 | 0.815320 | 9.821991e-52 | -8.615850e-47 |
| Msa0838660 | Msa1132540 | 0.809150 | 2.181116e-50 | -8.615850e-47 |
| Msa0838660 | Msa1138600 | 0.800758 | 1.240331e-48 | -8.615850e-47 |
| Msa0838660 | Msa1157730 | 0.824383 | 8.316633e-54 | -8.615850e-47 |
| Msa0838660 | Msa1166180 | 0.827083 | 1.902491e-54 | -8.615850e-47 |
| Msa0838660 | Msa1166280 | 0.821739 | 3.439465e-53 | -8.615850e-47 |
| Msa0838660 | Msa1171340 | 0.808636 | 2.809560e-50 | -8.615850e-47 |
| Msa0838660 | Msa1190820 | 0.825977 | 3.491283e-54 | -8.615850e-47 |
| Msa0838660 | Msa1198450 | 0.860074 | 2.661541e-63 | -8.615850e-47 |
| Msa0838660 | Msa1219250 | 0.828718 | 7.692605e-55 | -8.615850e-47 |
| Msa0838660 | Msa1220740 | 0.875358 | 3.282953e-68 | -8.615850e-47 |
| Msa0838660 | Msa1229640 | 0.806480 | 8.057917e-50 | -8.615850e-47 |
| Msa0838660 | Msa1238730 | 0.828680 | 7.856292e-55 | -8.615850e-47 |
| Msa0838660 | Msa1250670 | 0.808528 | 2.963248e-50 | -8.615850e-47 |
| Msa0838660 | Msa1263590 | 0.817731 | 2.832332e-52 | -8.615850e-47 |
| Msa0838660 | Msa1263670 | 0.813506 | 2.472807e-51 | -8.615850e-47 |
| Msa0838660 | Msa1267860 | 0.811932 | 5.467513e-51 | -8.615850e-47 |
| Msa0838660 | Msa1286910 | 0.820706 | 5.951450e-53 | -8.615850e-47 |
| Msa0838660 | Msa1288730 | 0.800204 | 1.607976e-48 | -8.615850e-47 |
| Msa0838660 | Msa1302170 | 0.808685 | 2.743181e-50 | -8.615850e-47 |
| Msa0838660 | Msa1302780 | 0.840190 | 1.009698e-57 | -8.615850e-47 |
| Msa0838660 | Msa1306200 | 0.810071 | 1.382801e-50 | -8.615850e-47 |
| Msa0838660 | Msa1309100 | 0.809863 | 1.533533e-50 | -8.615850e-47 |
| Msa0838660 | Msa1316170 | 0.803141 | 4.015519e-49 | -8.615850e-47 |
| Msa0838660 | Msa1322420 | 0.807110 | 5.932502e-50 | -8.615850e-47 |
| Msa0838660 | Msa1323060 | 0.800287 | 1.547174e-48 | -8.615850e-47 |
| Msa0838660 | Msa1325650 | 0.824726 | 6.906239e-54 | -8.615850e-47 |
| Msa0838660 | Msa1327040 | 0.809132 | 2.200245e-50 | -8.615850e-47 |
| Msa0838660 | Msa1334650 | 0.865683 | 4.944168e-65 | -8.615850e-47 |
| Msa0838660 | Msa1347030 | 0.815601 | 8.505365e-52 | -8.615850e-47 |
| Msa0838660 | Msa1349360 | 0.817208 | 3.715929e-52 | -8.615850e-47 |
| Msa0838660 | Msa1365210 | 0.863944 | 1.734025e-64 | -8.615850e-47 |
| Msa0838660 | Msa1367940 | 0.814153 | 1.781215e-51 | -8.615850e-47 |
| Msa0838660 | Msa1372560 | 0.815089 | 1.105343e-51 | -8.615850e-47 |
| Msa0838660 | Msa1381130 | 0.830153 | 3.447856e-55 | -8.615850e-47 |
| Msa0838660 | Msa1388850 | 0.816796 | 4.597596e-52 | -8.615850e-47 |
| Msa0838660 | Msa1392680 | 0.837390 | 5.345979e-57 | -8.615850e-47 |
| Msa0838660 | Msa1405770 | 0.847656 | 1.007402e-59 | -8.615850e-47 |
| Msa0838660 | Msa1406230 | 0.823104 | 1.657694e-53 | -8.615850e-47 |
| Msa0838660 | Msa1410170 | 0.809727 | 1.640202e-50 | -8.615850e-47 |
| Msa0838660 | Msa1411830 | 0.829380 | 5.317286e-55 | -8.615850e-47 |
| Msa0838660 | Msa1422760 | 0.807626 | 4.611371e-50 | -8.615850e-47 |
| Msa0838660 | Msa1423190 | 0.833278 | 5.844802e-56 | -8.615850e-47 |
| Msa0838660 | Msa1435470 | 0.821716 | 3.482410e-53 | -8.615850e-47 |
| Msa0838660 | Msa1439800 | 0.813613 | 2.342575e-51 | -8.615850e-47 |
| Msa0838660 | Msa1440180 | 0.848973 | 4.355103e-60 | -8.615850e-47 |
| Msa0838660 | Msa1449740 | 0.848151 | 7.358359e-60 | -8.615850e-47 |
| Msa0838660 | Msa1450980 | 0.800357 | 1.497047e-48 | -8.615850e-47 |
| Msa0838660 | Msa1458920 | 0.834337 | 3.177888e-56 | -8.615850e-47 |
| Msa0122180 | Msa0838660 | 0.825329 | 4.973194e-54 | -8.615850e-47 |
| Msa0122210 | Msa0838660 | 0.826417 | 2.743940e-54 | -8.615850e-47 |
| Msa0132620 | Msa0838660 | 0.826355 | 2.839674e-54 | -8.615850e-47 |
| Msa0135980 | Msa0838660 | 0.808328 | 3.268513e-50 | -8.615850e-47 |
| Msa0141670 | Msa0838660 | 0.823251 | 1.532015e-53 | -8.615850e-47 |
| Msa0144340 | Msa0838660 | 0.804096 | 2.544857e-49 | -8.615850e-47 |
| Msa0146470 | Msa0838660 | 0.833493 | 5.168083e-56 | -8.615850e-47 |
| Msa0149070 | Msa0838660 | 0.811774 | 5.916389e-51 | -8.615850e-47 |
| Msa0150210 | Msa0838660 | 0.847784 | 9.290548e-60 | -8.615850e-47 |
| Msa0157020 | Msa0838660 | 0.856024 | 4.254629e-62 | -8.615850e-47 |
| Msa0178940 | Msa0838660 | 0.832954 | 7.038919e-56 | -8.615850e-47 |
| Msa0185390 | Msa0838660 | 0.832771 | 7.816066e-56 | -8.615850e-47 |
| Msa0203180 | Msa0838660 | 0.845476 | 3.966573e-59 | -8.615850e-47 |
| Msa0216210 | Msa0838660 | 0.800152 | 1.648090e-48 | -8.615850e-47 |
| Msa0222070 | Msa0838660 | 0.837025 | 6.628766e-57 | -8.615850e-47 |
| Msa0222120 | Msa0838660 | 0.835671 | 1.465198e-56 | -8.615850e-47 |
| Msa0227290 | Msa0838660 | 0.802896 | 4.512085e-49 | -8.615850e-47 |
| Msa0365150 | Msa0838660 | 0.825095 | 5.651450e-54 | -8.615850e-47 |
| Msa0369780 | Msa0838660 | 0.847599 | 1.044505e-59 | -8.615850e-47 |
| Msa0375430 | Msa0838660 | 0.825929 | 3.584722e-54 | -8.615850e-47 |
| Msa0380060 | Msa0838660 | 0.827144 | 1.840401e-54 | -8.615850e-47 |
| Msa0380430 | Msa0838660 | 0.804229 | 2.388194e-49 | -8.615850e-47 |
| Msa0382500 | Msa0838660 | 0.800953 | 1.131687e-48 | -8.615850e-47 |
| Msa0387790 | Msa0838660 | 0.837384 | 5.367118e-57 | -8.615850e-47 |
| Msa0393540 | Msa0838660 | 0.815917 | 7.231157e-52 | -8.615850e-47 |
| Msa0411560 | Msa0838660 | 0.802150 | 6.429584e-49 | -8.615850e-47 |
| Msa0417150 | Msa0838660 | 0.842550 | 2.414115e-58 | -8.615850e-47 |
| Msa0417630 | Msa0838660 | 0.818544 | 1.854425e-52 | -8.615850e-47 |
| Msa0421800 | Msa0838660 | 0.871912 | 4.760398e-67 | -8.615850e-47 |
| Msa0423110 | Msa0838660 | 0.807069 | 6.050464e-50 | -8.615850e-47 |
| Msa0426860 | Msa0838660 | 0.830736 | 2.482080e-55 | -8.615850e-47 |
| Msa0426890 | Msa0838660 | 0.808280 | 3.346383e-50 | -8.615850e-47 |
| Msa0427050 | Msa0838660 | 0.824135 | 9.510595e-54 | -8.615850e-47 |
| Msa0429270 | Msa0838660 | 0.820318 | 7.306332e-53 | -8.615850e-47 |
| Msa0432680 | Msa0838660 | 0.805414 | 1.350158e-49 | -8.615850e-47 |
| Msa0448080 | Msa0838660 | 0.813342 | 2.687217e-51 | -8.615850e-47 |
| Msa0456480 | Msa0838660 | 0.824284 | 8.774682e-54 | -8.615850e-47 |
| Msa0462120 | Msa0838660 | 0.812415 | 4.288383e-51 | -8.615850e-47 |
| Msa0463990 | Msa0838660 | 0.816903 | 4.350309e-52 | -8.615850e-47 |
| Msa0467080 | Msa0838660 | 0.822267 | 2.595839e-53 | -8.615850e-47 |
| Msa0467800 | Msa0838660 | 0.858935 | 5.855101e-63 | -8.615850e-47 |
| Msa0467880 | Msa0838660 | 0.857208 | 1.909081e-62 | -8.615850e-47 |
| Msa0469270 | Msa0838660 | 0.810293 | 1.238733e-50 | -8.615850e-47 |
| Msa0472270 | Msa0838660 | 0.828289 | 9.764309e-55 | -8.615850e-47 |
| Msa0473450 | Msa0838660 | 0.802327 | 5.912205e-49 | -8.615850e-47 |
| Msa0246300 | Msa0838660 | 0.842430 | 2.597897e-58 | -8.615850e-47 |
| Msa0250520 | Msa0838660 | 0.815393 | 9.458342e-52 | -8.615850e-47 |
| Msa0257130 | Msa0838660 | 0.804150 | 2.480467e-49 | -8.615850e-47 |
| Msa0259330 | Msa0838660 | 0.822858 | 1.891715e-53 | -8.615850e-47 |
| Msa0263620 | Msa0838660 | 0.836434 | 9.381078e-57 | -8.615850e-47 |
| Msa0270460 | Msa0838660 | 0.800740 | 1.250801e-48 | -8.615850e-47 |
| Msa0274780 | Msa0838660 | 0.800929 | 1.144179e-48 | -8.615850e-47 |
| Msa0284260 | Msa0838660 | 0.801428 | 9.045900e-49 | -8.615850e-47 |
| Msa0284870 | Msa0838660 | 0.855079 | 8.022011e-62 | -8.615850e-47 |
| Msa0292860 | Msa0838660 | 0.827602 | 1.428784e-54 | -8.615850e-47 |
| Msa0296000 | Msa0838660 | 0.818303 | 2.102897e-52 | -8.615850e-47 |
| Msa0301460 | Msa0838660 | 0.801085 | 1.063436e-48 | -8.615850e-47 |
| Msa0304870 | Msa0838660 | 0.813117 | 3.009923e-51 | -8.615850e-47 |
| Msa0323630 | Msa0838660 | 0.828670 | 7.901292e-55 | -8.615850e-47 |
| Msa0323640 | Msa0838660 | 0.805212 | 1.488451e-49 | -8.615850e-47 |
| Msa0333900 | Msa0838660 | 0.807407 | 5.130908e-50 | -8.615850e-47 |
| Msa0334020 | Msa0838660 | 0.815554 | 8.709035e-52 | -8.615850e-47 |
| Msa0334980 | Msa0838660 | 0.809858 | 1.537106e-50 | -8.615850e-47 |
| Msa0341260 | Msa0838660 | 0.812399 | 4.323666e-51 | -8.615850e-47 |
| Msa0349000 | Msa0838660 | 0.813317 | 2.720477e-51 | -8.615850e-47 |
| Msa0484220 | Msa0838660 | 0.851064 | 1.131847e-60 | -8.615850e-47 |
| Msa0485280 | Msa0838660 | 0.828682 | 7.848034e-55 | -8.615850e-47 |
| Msa0486530 | Msa0838660 | 0.802839 | 4.637292e-49 | -8.615850e-47 |
| Msa0486570 | Msa0838660 | 0.811398 | 7.141423e-51 | -8.615850e-47 |
| Msa0488830 | Msa0838660 | 0.815204 | 1.042304e-51 | -8.615850e-47 |
| Msa0509540 | Msa0838660 | 0.846612 | 1.946555e-59 | -8.615850e-47 |
| Msa0512310 | Msa0838660 | 0.830274 | 3.220048e-55 | -8.615850e-47 |
| Msa0514260 | Msa0838660 | 0.867026 | 1.853746e-65 | -8.615850e-47 |
| Msa0519200 | Msa0838660 | 0.835374 | 1.741976e-56 | -8.615850e-47 |
| Msa0534420 | Msa0838660 | 0.857875 | 1.211423e-62 | -8.615850e-47 |
| Msa0537870 | Msa0838660 | 0.838006 | 3.716569e-57 | -8.615850e-47 |
| Msa0537880 | Msa0838660 | 0.840596 | 7.903999e-58 | -8.615850e-47 |
| Msa0538000 | Msa0838660 | 0.843740 | 1.163597e-58 | -8.615850e-47 |
| Msa0538260 | Msa0838660 | 0.848542 | 5.734956e-60 | -8.615850e-47 |
| Msa0538270 | Msa0838660 | 0.825162 | 5.447052e-54 | -8.615850e-47 |
| Msa0538570 | Msa0838660 | 0.814441 | 1.538524e-51 | -8.615850e-47 |
| Msa0542040 | Msa0838660 | 0.800595 | 1.338852e-48 | -8.615850e-47 |
| Msa0546740 | Msa0838660 | 0.807934 | 3.965607e-50 | -8.615850e-47 |
| Msa0547050 | Msa0838660 | 0.830895 | 2.269216e-55 | -8.615850e-47 |
| Msa0550630 | Msa0838660 | 0.834077 | 3.691192e-56 | -8.615850e-47 |
| Msa0560200 | Msa0838660 | 0.824015 | 1.014516e-53 | -8.615850e-47 |
| Msa0576600 | Msa0838660 | 0.807305 | 5.394006e-50 | -8.615850e-47 |
| Msa0577870 | Msa0838660 | 0.809857 | 1.537878e-50 | -8.615850e-47 |
| Msa0594180 | Msa0838660 | 0.819607 | 1.062565e-52 | -8.615850e-47 |
| Msa0594390 | Msa0838660 | 0.810834 | 9.465860e-51 | -8.615850e-47 |
| Msa0595780 | Msa0838660 | 0.826286 | 2.948112e-54 | -8.615850e-47 |
| Msa0598250 | Msa0838660 | 0.828846 | 7.162353e-55 | -8.615850e-47 |
| Msa0600390 | Msa0838660 | 0.828020 | 1.133688e-54 | -8.615850e-47 |
| Msa0601780 | Msa0838660 | 0.800257 | 1.568708e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838660 | MtrunA17_Chr5g0406281 | 95.676 | 185 | 8 | 0 | 1 | 185 | 1 | 185 | 3.80e-132 | 367 |
| Msa0838660 | MtrunA17_Chr5g0405631 | 49.123 | 114 | 56 | 1 | 74 | 185 | 31 | 144 | 1.42e-31 | 111 |
| Msa0838660 | MtrunA17_Chr2g0284621 | 42.857 | 112 | 63 | 1 | 75 | 185 | 12 | 123 | 5.82e-29 | 104 |
| Msa0838660 | MtrunA17_Chr8g0371681 | 45.833 | 120 | 59 | 2 | 61 | 178 | 5 | 120 | 7.33e-28 | 101 |
| Msa0838660 | MtrunA17_Chr4g0020691 | 39.200 | 125 | 71 | 2 | 62 | 185 | 3 | 123 | 9.04e-28 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838660 | AT4G35770.1 | 58.741 | 143 | 55 | 2 | 47 | 185 | 40 | 182 | 2.95e-56 | 176 |
| Msa0838660 | AT5G66040.1 | 65.487 | 113 | 39 | 0 | 72 | 184 | 7 | 119 | 4.82e-51 | 160 |
| Msa0838660 | AT4G35770.2 | 57.143 | 119 | 47 | 2 | 47 | 161 | 40 | 158 | 4.54e-42 | 139 |
| Msa0838660 | AT4G35770.3 | 57.143 | 119 | 47 | 2 | 47 | 161 | 40 | 158 | 6.61e-42 | 139 |
| Msa0838660 | AT4G35770.5 | 56.436 | 101 | 40 | 2 | 47 | 143 | 40 | 140 | 1.86e-33 | 117 |
| Msa0838660 | AT5G66170.3 | 49.107 | 112 | 51 | 2 | 67 | 176 | 12 | 119 | 9.57e-31 | 109 |
| Msa0838660 | AT5G66170.2 | 48.246 | 114 | 51 | 3 | 67 | 176 | 12 | 121 | 9.10e-29 | 104 |
| Msa0838660 | AT2G21045.1 | 41.441 | 111 | 65 | 0 | 75 | 185 | 43 | 153 | 7.04e-27 | 100 |
| Msa0838660 | AT5G66170.1 | 50.515 | 97 | 42 | 2 | 67 | 161 | 12 | 104 | 5.53e-24 | 92.0 |
| Msa0838660 | AT5G66040.2 | 60.938 | 64 | 25 | 0 | 121 | 184 | 1 | 64 | 5.85e-23 | 87.4 |
| Msa0838660 | AT2G17850.1 | 40.385 | 104 | 60 | 1 | 75 | 176 | 34 | 137 | 1.08e-21 | 86.7 |
| Msa0838660 | AT4G35770.4 | 54.430 | 79 | 32 | 2 | 47 | 121 | 40 | 118 | 2.82e-21 | 84.7 |
| Msa0838660 | AT4G35770.6 | 54.430 | 79 | 32 | 2 | 47 | 121 | 40 | 118 | 2.82e-21 | 84.7 |
| Msa0838660 | AT2G17850.3 | 33.929 | 112 | 63 | 2 | 77 | 177 | 59 | 170 | 4.63e-16 | 72.8 |
| Msa0838660 | AT2G17850.2 | 39.326 | 89 | 52 | 1 | 75 | 161 | 34 | 122 | 2.63e-15 | 69.3 |
Find 63 sgRNAs with CRISPR-Local
Find 119 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATGTCCCTTATTAAATT+TGG | 0.146508 | 5_4:+13136738 | None:intergenic |
| AAAATCTTCCAAATTTAATA+AGG | 0.178231 | 5_4:-13136746 | Msa0838660:CDS |
| TCTAGCTGGCCATAAGTATT+TGG | 0.181385 | 5_4:-13136498 | Msa0838660:CDS |
| ACCTTACATCCAAATACTTA+TGG | 0.228445 | 5_4:+13136489 | None:intergenic |
| GTGTGGTTTAAAGGGGAATT+TGG | 0.241136 | 5_4:-13136576 | Msa0838660:CDS |
| AAGCACGATGTGTGGTTTAA+AGG | 0.244947 | 5_4:-13136585 | Msa0838660:CDS |
| TGTAACAATCACTTAATATC+TGG | 0.245032 | 5_4:+13137102 | None:intergenic |
| AGCATATCATGATTTCTTCT+TGG | 0.301007 | 5_4:+13134942 | None:intergenic |
| GATCATGTAAATGCATAAAA+AGG | 0.312692 | 5_4:-13135161 | Msa0838660:three_prime_UTR |
| TTATTTCTATATACAGCTTC+AGG | 0.321929 | 5_4:+13135199 | None:intergenic |
| AGCACGATGTGTGGTTTAAA+GGG | 0.328888 | 5_4:-13136584 | Msa0838660:CDS |
| GATCCAACTTTGTACATATA+AGG | 0.335693 | 5_4:+13136133 | None:intergenic |
| TATGCTGCTTGGACTCAAAA+TGG | 0.348576 | 5_4:-13135246 | Msa0838660:CDS |
| ATGAAGTATCATGTAATTCT+TGG | 0.358857 | 5_4:-13134756 | Msa0838660:three_prime_UTR |
| AAATCTTCCAAATTTAATAA+GGG | 0.364373 | 5_4:-13136745 | Msa0838660:CDS |
| ATTAGAGTGTGACCTTGTTA+TGG | 0.398979 | 5_4:+13136906 | None:intergenic |
| GGGAATTTGGAGGAAGTTGT+TGG | 0.404121 | 5_4:-13136563 | Msa0838660:CDS |
| GCCATAAGTATTTGGATGTA+AGG | 0.427420 | 5_4:-13136490 | Msa0838660:intron |
| GAAATAATAAGAATTCTGTT+TGG | 0.432163 | 5_4:-13135183 | Msa0838660:three_prime_UTR |
| TAGCTGGTGGTTATGCTGCT+TGG | 0.436274 | 5_4:-13135257 | Msa0838660:CDS |
| ACCAGCTATGTCTGTGAGTC+CGG | 0.440393 | 5_4:+13135272 | None:intergenic |
| TCTGAAGAAACCCTCTCTCT+TGG | 0.444875 | 5_4:-13135066 | Msa0838660:three_prime_UTR |
| CCTTCATATTATTACTGTTG+TGG | 0.444925 | 5_4:+13134829 | None:intergenic |
| TACATATCAATAATTAATGA+AGG | 0.448491 | 5_4:-13135109 | Msa0838660:three_prime_UTR |
| AACCAAAGTGTTCCAACTTC+CGG | 0.448542 | 5_4:-13136702 | Msa0838660:intron |
| GTGTTCTGCCGTAGAATTAG+AGG | 0.450733 | 5_4:+13136931 | None:intergenic |
| AGTGATTGTTACATATAAAG+AGG | 0.456852 | 5_4:-13137092 | Msa0838660:five_prime_UTR |
| TTCGAATTGAACTGTAAAGA+TGG | 0.461998 | 5_4:+13135017 | None:intergenic |
| TTAAATTCATTCAATTAATG+AGG | 0.463140 | 5_4:-13137206 | Msa0838660:five_prime_UTR |
| TATATGTACAAAGTTGGATC+AGG | 0.472445 | 5_4:-13136130 | Msa0838660:intron |
| ACACGCACCGGCACTGAAGT+TGG | 0.479606 | 5_4:+13136536 | None:intergenic |
| TTTAATGCTGGACACGCTCC+TGG | 0.480736 | 5_4:-13136169 | Msa0838660:CDS |
| GAAATTATGAAGAAATTGAA+TGG | 0.491476 | 5_4:+13134851 | None:intergenic |
| ACTTGCTACAGAACAATGAT+TGG | 0.496501 | 5_4:-13135223 | Msa0838660:exon |
| GTAACAATCACTTAATATCT+GGG | 0.502771 | 5_4:+13137103 | None:intergenic |
| ATACCTTATATGTACAAAGT+TGG | 0.502957 | 5_4:-13136136 | Msa0838660:CDS |
| AAATTATGAAGAAATTGAAT+GGG | 0.502996 | 5_4:+13134852 | None:intergenic |
| TGCATTGTATAGGGGTTCAC+CGG | 0.511879 | 5_4:-13135291 | Msa0838660:intron |
| GCTCACGAGCTTCTTCTAGC+TGG | 0.514761 | 5_4:-13136512 | Msa0838660:CDS |
| AGGGTTGTCAGCTTGGGAAA+AGG | 0.515357 | 5_4:-13135695 | Msa0838660:CDS |
| TTCGAACCATGATCATTGAC+AGG | 0.518961 | 5_4:-13135000 | Msa0838660:three_prime_UTR |
| CCACAACAGTAATAATATGA+AGG | 0.529671 | 5_4:-13134829 | Msa0838660:three_prime_UTR |
| TACCGGAAGTTGGAACACTT+TGG | 0.532325 | 5_4:+13136700 | None:intergenic |
| ATTCACGTCCTCTAATTCTA+CGG | 0.536092 | 5_4:-13136939 | Msa0838660:CDS |
| AGCTCGTGAGCTACACGCAC+CGG | 0.541355 | 5_4:+13136524 | None:intergenic |
| TGGAGTTCCAACTTCAGTGC+CGG | 0.543577 | 5_4:-13136543 | Msa0838660:CDS |
| ACCACGGAAGAGTTTAATGC+TGG | 0.548422 | 5_4:-13136181 | Msa0838660:CDS |
| TGGTTTAAAGGGGAATTTGG+AGG | 0.552343 | 5_4:-13136573 | Msa0838660:CDS |
| GCTTGGGAAAAGGTCTATGA+TGG | 0.555495 | 5_4:-13135685 | Msa0838660:CDS |
| ACCGGACTCACAGACATAGC+TGG | 0.570324 | 5_4:-13135273 | Msa0838660:CDS |
| TAAGGTATGTTAATCGCACC+AGG | 0.610995 | 5_4:+13136151 | None:intergenic |
| GCAAGCGGCGGAGACATCAA+AGG | 0.618010 | 5_4:+13136966 | None:intergenic |
| GCACGATGTGTGGTTTAAAG+GGG | 0.620601 | 5_4:-13136583 | Msa0838660:CDS |
| ATTGTGATTGTGCAGGACCA+CGG | 0.621639 | 5_4:-13136197 | Msa0838660:intron |
| TCCAGCATTAAACTCTTCCG+TGG | 0.640037 | 5_4:+13136180 | None:intergenic |
| ACACATCAAGCCAAGAGAGA+GGG | 0.640638 | 5_4:+13135056 | None:intergenic |
| GGCAGAACACGACCATAACA+AGG | 0.641310 | 5_4:-13136918 | Msa0838660:intron |
| AACACATCAAGCCAAGAGAG+AGG | 0.646052 | 5_4:+13135055 | None:intergenic |
| AAATACTATGAAATGCAAAG+TGG | 0.646380 | 5_4:+13137027 | None:intergenic |
| TCGAATTGAACTGTAAAGAT+GGG | 0.648236 | 5_4:+13135018 | None:intergenic |
| AGGACGTGAATGAAAGCAAG+CGG | 0.673997 | 5_4:+13136951 | None:intergenic |
| ACGTGAATGAAAGCAAGCGG+CGG | 0.698419 | 5_4:+13136954 | None:intergenic |
| GGACTCACAGACATAGCTGG+TGG | 0.717723 | 5_4:-13135270 | Msa0838660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCTTCCAAATTTAATA+AGG | - | chr5_4:13135193-13135212 | Msa0838660:three_prime_UTR | 15.0% |
| !! | AAATCTTCCAAATTTAATAA+GGG | - | chr5_4:13135194-13135213 | Msa0838660:three_prime_UTR | 15.0% |
| !! | CAAAACATTAGTATATTAAT+CGG | + | chr5_4:13135673-13135692 | None:intergenic | 15.0% |
| !! | ATATGAATAGATTAGAAAAA+AGG | + | chr5_4:13136022-13136041 | None:intergenic | 15.0% |
| !! | TACATATCAATAATTAATGA+AGG | - | chr5_4:13136830-13136849 | Msa0838660:intron | 15.0% |
| !! | AAATTATGAAGAAATTGAAT+GGG | + | chr5_4:13137090-13137109 | None:intergenic | 15.0% |
| !! | AGTATATAGATATAGAAGAA+TGG | + | chr5_4:13135063-13135082 | None:intergenic | 20.0% |
| !! | TAAAGTAACCAATTTAATCA+AGG | - | chr5_4:13135472-13135491 | Msa0838660:intron | 20.0% |
| !!! | CATAATAGTTTTGTAGTTTT+AGG | + | chr5_4:13135546-13135565 | None:intergenic | 20.0% |
| !!! | CGATTAATATACTAATGTTT+TGG | - | chr5_4:13135671-13135690 | Msa0838660:CDS | 20.0% |
| !! | TTGTAATATTCTTAGTGTTT+AGG | - | chr5_4:13135860-13135879 | Msa0838660:CDS | 20.0% |
| !! | TAAGAGATATATAATACTCT+TGG | - | chr5_4:13135911-13135930 | Msa0838660:intron | 20.0% |
| !!! | AGTTGTTTTGATTAATCTAA+TGG | + | chr5_4:13135937-13135956 | None:intergenic | 20.0% |
| !! | AAATAACATACAAAATCTCA+TGG | + | chr5_4:13136179-13136198 | None:intergenic | 20.0% |
| !!! | TTATTTTTGTTTACACTTTC+AGG | + | chr5_4:13136506-13136525 | None:intergenic | 20.0% |
| !!! | TTTTCATCAATAATTAGTCT+TGG | - | chr5_4:13136538-13136557 | Msa0838660:CDS | 20.0% |
| !!! | TTAACTTCTTGAAAATTTTG+AGG | - | chr5_4:13136598-13136617 | Msa0838660:intron | 20.0% |
| !! | GAAATAATAAGAATTCTGTT+TGG | - | chr5_4:13136756-13136775 | Msa0838660:CDS | 20.0% |
| !! | GAAATTATGAAGAAATTGAA+TGG | + | chr5_4:13137091-13137110 | None:intergenic | 20.0% |
| ! | GTAACAATCACTTAATATCT+GGG | + | chr5_4:13134839-13134858 | None:intergenic | 25.0% |
| ! | TGTAACAATCACTTAATATC+TGG | + | chr5_4:13134840-13134859 | None:intergenic | 25.0% |
| ! | AGTGATTGTTACATATAAAG+AGG | - | chr5_4:13134847-13134866 | Msa0838660:three_prime_UTR | 25.0% |
| !!! | CTTTTTTATGAAATGCTTTG+AGG | + | chr5_4:13134888-13134907 | None:intergenic | 25.0% |
| ! | AAATACTATGAAATGCAAAG+TGG | + | chr5_4:13134915-13134934 | None:intergenic | 25.0% |
| ! | TCTATGTCCCTTATTAAATT+TGG | + | chr5_4:13135204-13135223 | None:intergenic | 25.0% |
| !!! | AATGTTTTGGAATTGTGATT+TGG | - | chr5_4:13135684-13135703 | Msa0838660:CDS | 25.0% |
| ! | ATACCTTATATGTACAAAGT+TGG | - | chr5_4:13135803-13135822 | Msa0838660:intron | 25.0% |
| ! | TAGATTAATCAAAACAACTG+AGG | - | chr5_4:13135938-13135957 | Msa0838660:intron | 25.0% |
| ! | AGATCAAAAAGAGATCAAAT+TGG | - | chr5_4:13135982-13136001 | Msa0838660:intron | 25.0% |
| ! | ATTAGAAAAAAGGACACTAA+TGG | + | chr5_4:13136012-13136031 | None:intergenic | 25.0% |
| ! | CATTAGCAGATGAATTAATT+TGG | + | chr5_4:13136211-13136230 | None:intergenic | 25.0% |
| ! | TATTGATGAAAAAAGTAGCA+CGG | + | chr5_4:13136530-13136549 | None:intergenic | 25.0% |
| !! | GTTAATAAAGTATCTATCAC+TGG | + | chr5_4:13136583-13136602 | None:intergenic | 25.0% |
| !!! | ACAATTGTTTTGCATTGTAT+AGG | - | chr5_4:13136638-13136657 | Msa0838660:intron | 25.0% |
| !!! | CAATTGTTTTGCATTGTATA+GGG | - | chr5_4:13136639-13136658 | Msa0838660:intron | 25.0% |
| !!! | AATTGTTTTGCATTGTATAG+GGG | - | chr5_4:13136640-13136659 | Msa0838660:intron | 25.0% |
| !!! | TTATTTCTATATACAGCTTC+AGG | + | chr5_4:13136743-13136762 | None:intergenic | 25.0% |
| ! | GATCATGTAAATGCATAAAA+AGG | - | chr5_4:13136778-13136797 | Msa0838660:intron | 25.0% |
| ! | ATGTAAATGCATAAAAAGGA+AGG | - | chr5_4:13136782-13136801 | Msa0838660:intron | 25.0% |
| !! | ATGAAGTATCATGTAATTCT+TGG | - | chr5_4:13137183-13137202 | Msa0838660:five_prime_UTR | 25.0% |
| !! | TCAACACTTTTTACACTTAC+CGG | + | chr5_4:13135259-13135278 | None:intergenic | 30.0% |
| ACCTTACATCCAAATACTTA+TGG | + | chr5_4:13135453-13135472 | None:intergenic | 30.0% | |
| CATTGAAGCCTTGATTAAAT+TGG | + | chr5_4:13135483-13135502 | None:intergenic | 30.0% | |
| ACAATCACAATAAACAGGTA+TGG | + | chr5_4:13135733-13135752 | None:intergenic | 30.0% | |
| GATCCAACTTTGTACATATA+AGG | + | chr5_4:13135809-13135828 | None:intergenic | 30.0% | |
| TATATGTACAAAGTTGGATC+AGG | - | chr5_4:13135809-13135828 | Msa0838660:CDS | 30.0% | |
| AATTATGTGTTCATGCATAC+AGG | - | chr5_4:13136060-13136079 | Msa0838660:intron | 30.0% | |
| ATTATGTGTTCATGCATACA+GGG | - | chr5_4:13136061-13136080 | Msa0838660:intron | 30.0% | |
| ! | GAACAGCAATTTTGTTAAAG+AGG | - | chr5_4:13136092-13136111 | Msa0838660:intron | 30.0% |
| ! | ATCTTCTTTTCTAAACTGTG+AGG | + | chr5_4:13136121-13136140 | None:intergenic | 30.0% |
| !! | CTAATGTTATTGCTTTTGCA+GGG | - | chr5_4:13136225-13136244 | Msa0838660:intron | 30.0% |
| AACTCAAACAAGAAGTGAAA+GGG | + | chr5_4:13136444-13136463 | None:intergenic | 30.0% | |
| AAACTCAAACAAGAAGTGAA+AGG | + | chr5_4:13136445-13136464 | None:intergenic | 30.0% | |
| AAGTATCTATCACTGGAAAT+TGG | + | chr5_4:13136576-13136595 | None:intergenic | 30.0% | |
| TCGAATTGAACTGTAAAGAT+GGG | + | chr5_4:13136924-13136943 | None:intergenic | 30.0% | |
| TTCGAATTGAACTGTAAAGA+TGG | + | chr5_4:13136925-13136944 | None:intergenic | 30.0% | |
| !!! | TTTTTTCCTGTCAATGATCA+TGG | + | chr5_4:13136948-13136967 | None:intergenic | 30.0% |
| AGCATATCATGATTTCTTCT+TGG | + | chr5_4:13137000-13137019 | None:intergenic | 30.0% | |
| CCTTCATATTATTACTGTTG+TGG | + | chr5_4:13137113-13137132 | None:intergenic | 30.0% | |
| CCACAACAGTAATAATATGA+AGG | - | chr5_4:13137110-13137129 | Msa0838660:five_prime_UTR | 30.0% | |
| ATTCACGTCCTCTAATTCTA+CGG | - | chr5_4:13135000-13135019 | Msa0838660:three_prime_UTR | 35.0% | |
| ATTAGAGTGTGACCTTGTTA+TGG | + | chr5_4:13135036-13135055 | None:intergenic | 35.0% | |
| ! | TTTTTACACTTACCGGAAGT+TGG | + | chr5_4:13135252-13135271 | None:intergenic | 35.0% |
| !!! | TTTTTTCAAAGCACGATGTG+TGG | - | chr5_4:13135346-13135365 | Msa0838660:intron | 35.0% |
| GCCATAAGTATTTGGATGTA+AGG | - | chr5_4:13135449-13135468 | Msa0838660:intron | 35.0% | |
| CAACTGAGGTTTGATAGAAT+AGG | - | chr5_4:13135952-13135971 | Msa0838660:intron | 35.0% | |
| !! | GCTAATGTTATTGCTTTTGC+AGG | - | chr5_4:13136224-13136243 | Msa0838660:intron | 35.0% |
| ACTCAAACAAGAAGTGAAAG+GGG | + | chr5_4:13136443-13136462 | None:intergenic | 35.0% | |
| TAGCACTCAACTAAAATGCT+AGG | + | chr5_4:13136471-13136490 | None:intergenic | 35.0% | |
| !!! | TAGCATTTTAGTTGAGTGCT+AGG | - | chr5_4:13136470-13136489 | Msa0838660:intron | 35.0% |
| !!! | TTTTGAGGTCAAAGCTTGTT+TGG | - | chr5_4:13136613-13136632 | Msa0838660:intron | 35.0% |
| ! | ACTTGCTACAGAACAATGAT+TGG | - | chr5_4:13136716-13136735 | Msa0838660:CDS | 35.0% |
| AATGCATAAAAAGGAAGGAG+TGG | - | chr5_4:13136787-13136806 | Msa0838660:intron | 35.0% | |
| ! | AACCAAAGTGTTCCAACTTC+CGG | - | chr5_4:13135237-13135256 | Msa0838660:CDS | 40.0% |
| AAGCACGATGTGTGGTTTAA+AGG | - | chr5_4:13135354-13135373 | Msa0838660:intron | 40.0% | |
| AGCACGATGTGTGGTTTAAA+GGG | - | chr5_4:13135355-13135374 | Msa0838660:intron | 40.0% | |
| GTGTGGTTTAAAGGGGAATT+TGG | - | chr5_4:13135363-13135382 | Msa0838660:intron | 40.0% | |
| TGGTTTAAAGGGGAATTTGG+AGG | - | chr5_4:13135366-13135385 | Msa0838660:intron | 40.0% | |
| TCTAGCTGGCCATAAGTATT+TGG | - | chr5_4:13135441-13135460 | Msa0838660:intron | 40.0% | |
| ! | GTATGGAAAGTCGTGAGTTT+TGG | + | chr5_4:13135716-13135735 | None:intergenic | 40.0% |
| CCTGCACAATCACAATAAAC+AGG | + | chr5_4:13135738-13135757 | None:intergenic | 40.0% | |
| CCTGTTTATTGTGATTGTGC+AGG | - | chr5_4:13135735-13135754 | Msa0838660:intron | 40.0% | |
| TAAGGTATGTTAATCGCACC+AGG | + | chr5_4:13135791-13135810 | None:intergenic | 40.0% | |
| ACATACAAAATCTCATGGCG+CGG | + | chr5_4:13136174-13136193 | None:intergenic | 40.0% | |
| CTCAAACAAGAAGTGAAAGG+GGG | + | chr5_4:13136442-13136461 | None:intergenic | 40.0% | |
| ! | TATGCTGCTTGGACTCAAAA+TGG | - | chr5_4:13136693-13136712 | Msa0838660:intron | 40.0% |
| CATAAAAAGGAAGGAGTGGA+TGG | - | chr5_4:13136791-13136810 | Msa0838660:intron | 40.0% | |
| TTCGAACCATGATCATTGAC+AGG | - | chr5_4:13136939-13136958 | Msa0838660:CDS | 40.0% | |
| AGGACGTGAATGAAAGCAAG+CGG | + | chr5_4:13134991-13135010 | None:intergenic | 45.0% | |
| GTGTTCTGCCGTAGAATTAG+AGG | + | chr5_4:13135011-13135030 | None:intergenic | 45.0% | |
| TACCGGAAGTTGGAACACTT+TGG | + | chr5_4:13135242-13135261 | None:intergenic | 45.0% | |
| GCACGATGTGTGGTTTAAAG+GGG | - | chr5_4:13135356-13135375 | Msa0838660:intron | 45.0% | |
| GGGAATTTGGAGGAAGTTGT+TGG | - | chr5_4:13135376-13135395 | Msa0838660:intron | 45.0% | |
| TGGACTGAAAGTCGAGTACA+CGG | - | chr5_4:13135582-13135601 | Msa0838660:intron | 45.0% | |
| ATTGTGATTGTGCAGGACCA+CGG | - | chr5_4:13135742-13135761 | Msa0838660:intron | 45.0% | |
| ACCACGGAAGAGTTTAATGC+TGG | - | chr5_4:13135758-13135777 | Msa0838660:intron | 45.0% | |
| TCCAGCATTAAACTCTTCCG+TGG | + | chr5_4:13135762-13135781 | None:intergenic | 45.0% | |
| ! | TTTTGCAGGGTTGTCAGCTT+GGG | - | chr5_4:13136238-13136257 | Msa0838660:intron | 45.0% |
| GCTTGGGAAAAGGTCTATGA+TGG | - | chr5_4:13136254-13136273 | Msa0838660:intron | 45.0% | |
| TGCATTGTATAGGGGTTCAC+CGG | - | chr5_4:13136648-13136667 | Msa0838660:intron | 45.0% | |
| TCTGAAGAAACCCTCTCTCT+TGG | - | chr5_4:13136873-13136892 | Msa0838660:intron | 45.0% | |
| ACACATCAAGCCAAGAGAGA+GGG | + | chr5_4:13136886-13136905 | None:intergenic | 45.0% | |
| AACACATCAAGCCAAGAGAG+AGG | + | chr5_4:13136887-13136906 | None:intergenic | 45.0% | |
| !!! | TATGTAATTTTTAAATTTAT+TGG | - | chr5_4:13135562-13135581 | Msa0838660:intron | 5.0% |
| ACGTGAATGAAAGCAAGCGG+CGG | + | chr5_4:13134988-13135007 | None:intergenic | 50.0% | |
| GGCAGAACACGACCATAACA+AGG | - | chr5_4:13135021-13135040 | Msa0838660:three_prime_UTR | 50.0% | |
| TGGAGTTCCAACTTCAGTGC+CGG | - | chr5_4:13135396-13135415 | Msa0838660:intron | 50.0% | |
| TTTAATGCTGGACACGCTCC+TGG | - | chr5_4:13135770-13135789 | Msa0838660:intron | 50.0% | |
| ! | CTTTTGCAGGGTTGTCAGCT+TGG | - | chr5_4:13136237-13136256 | Msa0838660:intron | 50.0% |
| AGGGTTGTCAGCTTGGGAAA+AGG | - | chr5_4:13136244-13136263 | Msa0838660:intron | 50.0% | |
| ACCAGCTATGTCTGTGAGTC+CGG | + | chr5_4:13136670-13136689 | None:intergenic | 50.0% | |
| TAGCTGGTGGTTATGCTGCT+TGG | - | chr5_4:13136682-13136701 | Msa0838660:intron | 50.0% | |
| GCTCACGAGCTTCTTCTAGC+TGG | - | chr5_4:13135427-13135446 | Msa0838660:intron | 55.0% | |
| AAAATCTCATGGCGCGGCGA+AGG | + | chr5_4:13136168-13136187 | None:intergenic | 55.0% | |
| ACCGGACTCACAGACATAGC+TGG | - | chr5_4:13136666-13136685 | Msa0838660:intron | 55.0% | |
| GGACTCACAGACATAGCTGG+TGG | - | chr5_4:13136669-13136688 | Msa0838660:intron | 55.0% | |
| GCAAGCGGCGGAGACATCAA+AGG | + | chr5_4:13134976-13134995 | None:intergenic | 60.0% | |
| ! | ACACGCACCGGCACTGAAGT+TGG | + | chr5_4:13135406-13135425 | None:intergenic | 60.0% |
| AGCTCGTGAGCTACACGCAC+CGG | + | chr5_4:13135418-13135437 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 13134735 | 13137226 | 13134735 | ID=Msa0838660;Name=Msa0838660 |
| chr5_4 | mRNA | 13134735 | 13137226 | 13134735 | ID=Msa0838660-mRNA-1;Parent=Msa0838660;Name=Msa0838660-mRNA-1;_AED=0.10;_eAED=0.10;_QI=216|1|1|1|1|1|7|492|185 |
| chr5_4 | exon | 13134735 | 13135301 | 13134735 | ID=Msa0838660-mRNA-1:exon:5890;Parent=Msa0838660-mRNA-1 |
| chr5_4 | exon | 13135662 | 13135715 | 13135662 | ID=Msa0838660-mRNA-1:exon:5889;Parent=Msa0838660-mRNA-1 |
| chr5_4 | exon | 13135809 | 13135879 | 13135809 | ID=Msa0838660-mRNA-1:exon:5888;Parent=Msa0838660-mRNA-1 |
| chr5_4 | exon | 13136131 | 13136204 | 13136131 | ID=Msa0838660-mRNA-1:exon:5887;Parent=Msa0838660-mRNA-1 |
| chr5_4 | exon | 13136491 | 13136604 | 13136491 | ID=Msa0838660-mRNA-1:exon:5886;Parent=Msa0838660-mRNA-1 |
| chr5_4 | exon | 13136703 | 13136780 | 13136703 | ID=Msa0838660-mRNA-1:exon:5885;Parent=Msa0838660-mRNA-1 |
| chr5_4 | exon | 13136919 | 13137226 | 13136919 | ID=Msa0838660-mRNA-1:exon:5884;Parent=Msa0838660-mRNA-1 |
| chr5_4 | five_prime_UTR | 13137011 | 13137226 | 13137011 | ID=Msa0838660-mRNA-1:five_prime_utr;Parent=Msa0838660-mRNA-1 |
| chr5_4 | CDS | 13136919 | 13137010 | 13136919 | ID=Msa0838660-mRNA-1:cds;Parent=Msa0838660-mRNA-1 |
| chr5_4 | CDS | 13136703 | 13136780 | 13136703 | ID=Msa0838660-mRNA-1:cds;Parent=Msa0838660-mRNA-1 |
| chr5_4 | CDS | 13136491 | 13136604 | 13136491 | ID=Msa0838660-mRNA-1:cds;Parent=Msa0838660-mRNA-1 |
| chr5_4 | CDS | 13136131 | 13136204 | 13136131 | ID=Msa0838660-mRNA-1:cds;Parent=Msa0838660-mRNA-1 |
| chr5_4 | CDS | 13135809 | 13135879 | 13135809 | ID=Msa0838660-mRNA-1:cds;Parent=Msa0838660-mRNA-1 |
| chr5_4 | CDS | 13135662 | 13135715 | 13135662 | ID=Msa0838660-mRNA-1:cds;Parent=Msa0838660-mRNA-1 |
| chr5_4 | CDS | 13135227 | 13135301 | 13135227 | ID=Msa0838660-mRNA-1:cds;Parent=Msa0838660-mRNA-1 |
| chr5_4 | three_prime_UTR | 13134735 | 13135226 | 13134735 | ID=Msa0838660-mRNA-1:three_prime_utr;Parent=Msa0838660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
