AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0038310


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0038310 MtrunA17_Chr1g0201791 75.658 304 26 5 1 303 1 257 1.05e-61 196
Msa0038310 MtrunA17_Chr6g0464351 70.330 91 27 0 212 302 20 110 3.62e-19 81.3
Msa0038310 MtrunA17_Chr6g0472131 69.231 91 25 1 212 302 20 107 9.12e-17 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 109 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAAGAAACACCATTTCTT+TGG 0.265818 1_1:+67721643 Msa0038310:CDS
TTGTGCCTGTGAGCATTCTC+TGG 0.272448 1_1:-67721511 None:intergenic
CCATGAGCATCATGAGAAAA+AGG 0.283151 1_1:+67721588 Msa0038310:CDS
GGCGGATATGGTGGTGGTTA+TGG 0.297675 1_1:+67720217 Msa0038310:CDS
CCAGTTTGCTTTGAGTGGTT+TGG 0.300019 1_1:+67721800 Msa0038310:three_prime_UTR
ACCACCACCGGTGGTGGTTT+TGG 0.301983 1_1:-67720401 None:intergenic
TCCGCCACCCGTGGTTGTTT+TGG 0.307495 1_1:-67720200 None:intergenic
ACAACCACGGGTGGCGGATA+TGG 0.315139 1_1:+67720205 Msa0038310:CDS
GGCGGCTACGGCGGTGGTTA+TGG 0.318700 1_1:+67720118 Msa0038310:CDS
GCCGCCACCAGTGGTTGTTT+TGG 0.330964 1_1:-67720101 None:intergenic
GGCGGCTACGGTGGTGGATA+TGG 0.331422 1_1:+67720367 Msa0038310:CDS
GGTGGCTACGGTGGTGGTTA+TGG 0.331534 1_1:+67720166 Msa0038310:CDS
CATGAGCATCTTGGTGAGTT+AGG 0.335349 1_1:+67720484 Msa0038310:CDS
ATAAGCATACAAGCATATTA+TGG 0.340474 1_1:+67721696 Msa0038310:three_prime_UTR
GGCGGCTACGGTGGTGGTTA+TGG 0.343719 1_1:+67720265 Msa0038310:CDS
GGCGACTACGGTGGTGGTTA+TGG 0.346202 1_1:+67720316 Msa0038310:CDS
ACAGGTGATGACTATGATTC+TGG 0.353087 1_1:+67719920 Msa0038310:CDS
ACCACCACCGGTGGTGGTTA+TGG 0.357161 1_1:+67720406 Msa0038310:CDS
GTAGCCACCACCAGTGGTTT+TGG 0.366481 1_1:-67720152 None:intergenic
GAGGAAGAAGAAGAAGTTCA+TGG 0.387151 1_1:+67721619 Msa0038310:CDS
TCATATGGTAATGACAATTC+TGG 0.390159 1_1:+67720004 Msa0038310:CDS
GAGTTAGGTGCTGCAGCTGC+TGG 0.393240 1_1:+67720499 Msa0038310:CDS
CCAAACCACTCAAAGCAAAC+TGG 0.402796 1_1:-67721800 None:intergenic
ACTGATAAGTACACGATATA+CGG 0.407439 1_1:+67721878 Msa0038310:three_prime_UTR
GAAGCAGCTGCAGTGGGATC+TGG 0.415672 1_1:+67721553 Msa0038310:CDS
TACTCTAATAATGAAACATC+TGG 0.429220 1_1:+67720067 Msa0038310:CDS
GGTTACAATAAAACATCATA+TGG 0.436340 1_1:+67719989 Msa0038310:CDS
ATCTTCCAGTTTGCTTTGAG+TGG 0.452238 1_1:+67721795 Msa0038310:three_prime_UTR
TAACCACTGTCAGTGTCTAT+AGG 0.455188 1_1:-67719878 None:intergenic
ACTGGTGGCGGCTACGGCGG+TGG 0.456265 1_1:+67720112 Msa0038310:CDS
TCTGGTGGTGACTATGAAAC+TGG 0.463689 1_1:+67720022 Msa0038310:CDS
ACAACCACTGGTGGCGGCTA+CGG 0.469364 1_1:+67720106 Msa0038310:CDS
ACTGGAGGCGGCTACGGTGG+TGG 0.471438 1_1:+67720361 Msa0038310:CDS
ACCACTGGCGGCTACGGTGG+TGG 0.476187 1_1:+67720259 Msa0038310:CDS
CATATGTTCAGCCAAAGAAA+TGG 0.483204 1_1:-67721654 None:intergenic
TACAATGATGACCAGCCATC+TGG 0.494200 1_1:+67719962 Msa0038310:CDS
ACCAAAACAACCACGGGTGG+CGG 0.495591 1_1:+67720199 Msa0038310:CDS
AGTTGCAGAAGCAGCTGCAG+TGG 0.498157 1_1:+67721546 Msa0038310:CDS
ACCAAAACCACCACCGGTGG+TGG 0.498197 1_1:+67720400 Msa0038310:CDS
GCCAAAACAACCACTGGTGG+CGG 0.500275 1_1:+67720100 Msa0038310:CDS
ACAACCACTGGTGGCGACTA+CGG 0.502247 1_1:+67720304 Msa0038310:CDS
AAAACAACCACTGGCGGCTA+CGG 0.502509 1_1:+67720253 Msa0038310:CDS
TTTGGAGAATGTTTCCAGCT+TGG 0.505186 1_1:+67721818 Msa0038310:three_prime_UTR
ACTGGTGGTGGCTACGGTGG+TGG 0.506091 1_1:+67720160 Msa0038310:CDS
TGTGCCTGTGAGCATTCTCT+GGG 0.507199 1_1:-67721510 None:intergenic
CACAGCAAACATGAGCATCT+TGG 0.507345 1_1:+67720475 Msa0038310:CDS
CATCATCATGCTTCTTGTGA+TGG 0.509136 1_1:-67719844 None:intergenic
AACAAAACATCATACTCTAC+AGG 0.515763 1_1:+67719902 Msa0038310:CDS
ACCATAACCACCACCGGTGG+TGG 0.516051 1_1:-67720407 None:intergenic
GTGTCATATAGATGTATGTA+TGG 0.517700 1_1:+67721840 Msa0038310:three_prime_UTR
ACAACCACTGGAGGCGGCTA+CGG 0.519220 1_1:+67720355 Msa0038310:CDS
GACACCAAAACCACTGGTGG+TGG 0.521255 1_1:+67720148 Msa0038310:CDS
ACCACGGGTGGCGGATATGG+TGG 0.535025 1_1:+67720208 Msa0038310:CDS
AAAACCACTGGTGGTGGCTA+CGG 0.535946 1_1:+67720154 Msa0038310:CDS
GCAGCTGCAGTGGGATCTGG+TGG 0.536922 1_1:+67721556 Msa0038310:CDS
AATGAAACATCTGGTGGCTA+TGG 0.540775 1_1:+67720076 Msa0038310:CDS
GATGGAAGAGGCCACGGCTA+CGG 0.545278 1_1:-67719826 None:intergenic
GACTCTGACACCAAAACCAC+TGG 0.545560 1_1:+67720142 Msa0038310:CDS
GTTGCAGAAGCAGCTGCAGT+GGG 0.546096 1_1:+67721547 Msa0038310:CDS
TTTCTCATGATGCTCATGGA+AGG 0.551185 1_1:-67721584 None:intergenic
ACCACTGGTGGCGGCTACGG+CGG 0.552249 1_1:+67720109 Msa0038310:CDS
ACGGGTGGCGGATATGGTGG+TGG 0.554084 1_1:+67720211 Msa0038310:CDS
TGTAACCACCACCAGATGGC+TGG 0.555821 1_1:-67719973 None:intergenic
AGCATGATGATGATGATAGT+AGG 0.556478 1_1:+67719855 Msa0038310:CDS
ACTGGTGGCGACTACGGTGG+TGG 0.556988 1_1:+67720310 Msa0038310:CDS
ACTAAAACAACCACTGGAGG+CGG 0.561518 1_1:+67720349 Msa0038310:CDS
ACCACTGGAGGCGGCTACGG+TGG 0.561554 1_1:+67720358 Msa0038310:CDS
CATGCTTCTTGTGATGGAAG+AGG 0.565809 1_1:-67719838 None:intergenic
ACAACCACTGGCGGCTACGG+TGG 0.567166 1_1:+67720256 Msa0038310:CDS
TCTGACACTAAAACAACCAC+TGG 0.570147 1_1:+67720343 Msa0038310:CDS
TGATGATGTTGATTATAAGA+AGG 0.572766 1_1:+67720441 Msa0038310:CDS
ACCACTGGTGGTGGCTACGG+TGG 0.575768 1_1:+67720157 Msa0038310:CDS
ACCACCGTAGCCGCCTCCAG+TGG 0.576587 1_1:-67720359 None:intergenic
TTAGGTGCTGCAGCTGCTGG+TGG 0.580522 1_1:+67720502 Msa0038310:CDS
TCTGACACTAAAACAACCAC+TGG 0.581882 1_1:+67720244 Msa0038310:CDS
TCTGACATTAAAACAACCAC+TGG 0.583853 1_1:+67720292 Msa0038310:CDS
TCTGACACCAAAACAACCAC+GGG 0.584515 1_1:+67720193 Msa0038310:CDS
ACATCTATATGACACCAAGC+TGG 0.586244 1_1:-67721832 None:intergenic
GACATTAAAACAACCACTGG+TGG 0.593258 1_1:+67720295 Msa0038310:CDS
TCTGACACCAAAACCACCAC+CGG 0.597416 1_1:+67720394 Msa0038310:CDS
ACCACCATATCCGCCACCCG+TGG 0.603586 1_1:-67720209 None:intergenic
CAGCTGCAGTGGGATCTGGT+GGG 0.605425 1_1:+67721557 Msa0038310:CDS
TCTTGTGATGGAAGAGGCCA+CGG 0.606734 1_1:-67719832 None:intergenic
GACACTAAAACAACCACTGG+CGG 0.607430 1_1:+67720247 Msa0038310:CDS
ATCGTCACCATAACCACCAC+CGG 0.607906 1_1:-67720413 None:intergenic
TGATGTTGATTATAAGAAGG+AGG 0.610955 1_1:+67720444 Msa0038310:CDS
TATGGTGCCAAAACAACCAC+TGG 0.612429 1_1:+67720094 Msa0038310:CDS
TCTAATAATGAAACATCTGG+TGG 0.616695 1_1:+67720070 Msa0038310:CDS
CTCTGACACCAAAACAACCA+CGG 0.619600 1_1:+67720192 Msa0038310:CDS
TTATTGTAACCACCACCAGA+TGG 0.622037 1_1:-67719977 None:intergenic
ACCACCACCGTAGCCGCCAG+TGG 0.623805 1_1:-67720260 None:intergenic
ACGGTTCTCTTCATCAGACA+TGG 0.625188 1_1:-67719807 None:intergenic
GACACTAAAACAACCACTGG+AGG 0.626777 1_1:+67720346 Msa0038310:CDS
ACCGCCGTAGCCGCCACCAG+TGG 0.626903 1_1:-67720110 None:intergenic
GATGACCAGCCATCTGGTGG+TGG 0.627887 1_1:+67719968 Msa0038310:CDS
GACACCAAAACAACCACGGG+TGG 0.630084 1_1:+67720196 Msa0038310:CDS
CAAGATGCTCATGTTTGCTG+TGG 0.630178 1_1:-67720474 None:intergenic
GACACCAAAACCACCACCGG+TGG 0.634543 1_1:+67720397 Msa0038310:CDS
ACCACTGGTGGCGACTACGG+TGG 0.635055 1_1:+67720307 Msa0038310:CDS
GATGAAGAGAACCGTAGCCG+TGG 0.635065 1_1:+67719815 Msa0038310:CDS
ACCACCGTAGTCGCCACCAG+TGG 0.636654 1_1:-67720308 None:intergenic
ACCACCGTAGCCACCACCAG+TGG 0.645976 1_1:-67720158 None:intergenic
AAGACCCAGAGAATGCTCAC+AGG 0.646034 1_1:+67721506 Msa0038310:CDS
TCTGACACCAAAACCACTGG+TGG 0.658393 1_1:+67720145 Msa0038310:CDS
GGTGCCAAAACAACCACTGG+TGG 0.667985 1_1:+67720097 Msa0038310:CDS
GTCACCATAACCACCACCGG+TGG 0.707664 1_1:-67720410 None:intergenic
AATGATGACCAGCCATCTGG+TGG 0.714048 1_1:+67719965 Msa0038310:CDS
TATGGTAATGACAATTCTGG+TGG 0.722206 1_1:+67720007 Msa0038310:CDS
AGGCCTATAGACACTGACAG+TGG 0.729201 1_1:+67719875 Msa0038310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTATTTTTATTTTTT+TGG + chr1_1:67721234-67721253 Msa0038310:intron 0.0%
!!! TATTTTTATTTTTATTTTTT+TGG + chr1_1:67721234-67721253 Msa0038310:intron 0.0%
!! AAAAAATTAATTACAAAGTT+TGG - chr1_1:67721198-67721217 None:intergenic 10.0%
!!! CTTATAATTAATTATGTTTT+TGG + chr1_1:67721744-67721763 Msa0038310:three_prime_UTR 10.0%
!! AAAAAATTAATTACAAAGTT+TGG - chr1_1:67721198-67721217 None:intergenic 10.0%
!!! CTTATAATTAATTATGTTTT+TGG + chr1_1:67721744-67721763 Msa0038310:three_prime_UTR 10.0%
!! GAAACAAATAACAAAAATAT+GGG - chr1_1:67720583-67720602 None:intergenic 15.0%
!! AGAAACAAATAACAAAAATA+TGG - chr1_1:67720584-67720603 None:intergenic 15.0%
!!! AATTATTCAAATGTTTTGTA+AGG - chr1_1:67720684-67720703 None:intergenic 15.0%
!!! TACTTTCAAATTTTCAATTT+TGG - chr1_1:67721425-67721444 None:intergenic 15.0%
!! GAAACAAATAACAAAAATAT+GGG - chr1_1:67720583-67720602 None:intergenic 15.0%
!! AGAAACAAATAACAAAAATA+TGG - chr1_1:67720584-67720603 None:intergenic 15.0%
!!! AATTATTCAAATGTTTTGTA+AGG - chr1_1:67720684-67720703 None:intergenic 15.0%
!!! TACTTTCAAATTTTCAATTT+TGG - chr1_1:67721425-67721444 None:intergenic 15.0%
!!! AATCAATAAATTTTCTCTGA+TGG + chr1_1:67720634-67720653 Msa0038310:intron 20.0%
!! AATGCAATGTTTAAATACTA+CGG - chr1_1:67721098-67721117 None:intergenic 20.0%
!!! TTAATGCAATTTTCCTATTA+TGG - chr1_1:67721143-67721162 None:intergenic 20.0%
!!! AATCAATAAATTTTCTCTGA+TGG + chr1_1:67720634-67720653 Msa0038310:intron 20.0%
!! AATGCAATGTTTAAATACTA+CGG - chr1_1:67721098-67721117 None:intergenic 20.0%
!!! TTAATGCAATTTTCCTATTA+TGG - chr1_1:67721143-67721162 None:intergenic 20.0%
! GGTTACAATAAAACATCATA+TGG + chr1_1:67719989-67720008 Msa0038310:CDS 25.0%
! TACTCTAATAATGAAACATC+TGG + chr1_1:67720067-67720086 Msa0038310:CDS 25.0%
!! TGATGATGTTGATTATAAGA+AGG + chr1_1:67720441-67720460 Msa0038310:CDS 25.0%
! TAAATAGCAATTAGGAGTAA+TGG - chr1_1:67720554-67720573 None:intergenic 25.0%
! GACTCATATTCATTAATTAG+TGG + chr1_1:67721013-67721032 Msa0038310:intron 25.0%
! TTCCTATTATGGAAATCTTA+GGG - chr1_1:67721132-67721151 None:intergenic 25.0%
! TTTCCTATTATGGAAATCTT+AGG - chr1_1:67721133-67721152 None:intergenic 25.0%
!!! TATTTTTTTGGTACAAGAAG+AGG + chr1_1:67721246-67721265 Msa0038310:intron 25.0%
!!! ATTTTTTTGGTACAAGAAGA+GGG + chr1_1:67721247-67721266 Msa0038310:intron 25.0%
! AATAAAATACGCAAGAACTT+GGG - chr1_1:67721278-67721297 None:intergenic 25.0%
! AAATAAAATACGCAAGAACT+TGG - chr1_1:67721279-67721298 None:intergenic 25.0%
! TGTAAAAATTCGATCTTGAT+TGG + chr1_1:67721306-67721325 Msa0038310:intron 25.0%
! TTACGCTATAAATAGACATA+GGG + chr1_1:67721376-67721395 Msa0038310:intron 25.0%
! ATAAGCATACAAGCATATTA+TGG + chr1_1:67721696-67721715 Msa0038310:three_prime_UTR 25.0%
! GGTTACAATAAAACATCATA+TGG + chr1_1:67719989-67720008 Msa0038310:CDS 25.0%
! TACTCTAATAATGAAACATC+TGG + chr1_1:67720067-67720086 Msa0038310:CDS 25.0%
!! TGATGATGTTGATTATAAGA+AGG + chr1_1:67720441-67720460 Msa0038310:CDS 25.0%
! TAAATAGCAATTAGGAGTAA+TGG - chr1_1:67720554-67720573 None:intergenic 25.0%
! GACTCATATTCATTAATTAG+TGG + chr1_1:67721013-67721032 Msa0038310:intron 25.0%
! TTCCTATTATGGAAATCTTA+GGG - chr1_1:67721132-67721151 None:intergenic 25.0%
! TTTCCTATTATGGAAATCTT+AGG - chr1_1:67721133-67721152 None:intergenic 25.0%
!!! TATTTTTTTGGTACAAGAAG+AGG + chr1_1:67721246-67721265 Msa0038310:intron 25.0%
!!! ATTTTTTTGGTACAAGAAGA+GGG + chr1_1:67721247-67721266 Msa0038310:intron 25.0%
! AATAAAATACGCAAGAACTT+GGG - chr1_1:67721278-67721297 None:intergenic 25.0%
! AAATAAAATACGCAAGAACT+TGG - chr1_1:67721279-67721298 None:intergenic 25.0%
! TGTAAAAATTCGATCTTGAT+TGG + chr1_1:67721306-67721325 Msa0038310:intron 25.0%
! TTACGCTATAAATAGACATA+GGG + chr1_1:67721376-67721395 Msa0038310:intron 25.0%
! ATAAGCATACAAGCATATTA+TGG + chr1_1:67721696-67721715 Msa0038310:three_prime_UTR 25.0%
AACAAAACATCATACTCTAC+AGG + chr1_1:67719902-67719921 Msa0038310:CDS 30.0%
! TCATATGGTAATGACAATTC+TGG + chr1_1:67720004-67720023 Msa0038310:CDS 30.0%
TCTAATAATGAAACATCTGG+TGG + chr1_1:67720070-67720089 Msa0038310:CDS 30.0%
! TGATGTTGATTATAAGAAGG+AGG + chr1_1:67720444-67720463 Msa0038310:CDS 30.0%
GGAGAGATTAAATAGCAATT+AGG - chr1_1:67720562-67720581 None:intergenic 30.0%
! TTCACTAGATGTTAGTTTAG+TGG - chr1_1:67720809-67720828 None:intergenic 30.0%
AACATCCAACCAAATATGAA+CGG - chr1_1:67721333-67721352 None:intergenic 30.0%
GTTACGCTATAAATAGACAT+AGG + chr1_1:67721375-67721394 Msa0038310:intron 30.0%
TGAGAAAAAGGAAACAAAAG+AGG + chr1_1:67721600-67721619 Msa0038310:CDS 30.0%
AAGAAGAAACACCATTTCTT+TGG + chr1_1:67721643-67721662 Msa0038310:CDS 30.0%
GTGTCATATAGATGTATGTA+TGG + chr1_1:67721840-67721859 Msa0038310:three_prime_UTR 30.0%
ACTGATAAGTACACGATATA+CGG + chr1_1:67721878-67721897 Msa0038310:three_prime_UTR 30.0%
AACAAAACATCATACTCTAC+AGG + chr1_1:67719902-67719921 Msa0038310:CDS 30.0%
! TCATATGGTAATGACAATTC+TGG + chr1_1:67720004-67720023 Msa0038310:CDS 30.0%
TCTAATAATGAAACATCTGG+TGG + chr1_1:67720070-67720089 Msa0038310:CDS 30.0%
! TGATGTTGATTATAAGAAGG+AGG + chr1_1:67720444-67720463 Msa0038310:CDS 30.0%
GGAGAGATTAAATAGCAATT+AGG - chr1_1:67720562-67720581 None:intergenic 30.0%
! TTCACTAGATGTTAGTTTAG+TGG - chr1_1:67720809-67720828 None:intergenic 30.0%
AACATCCAACCAAATATGAA+CGG - chr1_1:67721333-67721352 None:intergenic 30.0%
GTTACGCTATAAATAGACAT+AGG + chr1_1:67721375-67721394 Msa0038310:intron 30.0%
TGAGAAAAAGGAAACAAAAG+AGG + chr1_1:67721600-67721619 Msa0038310:CDS 30.0%
AAGAAGAAACACCATTTCTT+TGG + chr1_1:67721643-67721662 Msa0038310:CDS 30.0%
GTGTCATATAGATGTATGTA+TGG + chr1_1:67721840-67721859 Msa0038310:three_prime_UTR 30.0%
ACTGATAAGTACACGATATA+CGG + chr1_1:67721878-67721897 Msa0038310:three_prime_UTR 30.0%
! AGCATGATGATGATGATAGT+AGG + chr1_1:67719855-67719874 Msa0038310:CDS 35.0%
! TATGGTAATGACAATTCTGG+TGG + chr1_1:67720007-67720026 Msa0038310:CDS 35.0%
TCTGACATTAAAACAACCAC+TGG + chr1_1:67720292-67720311 Msa0038310:CDS 35.0%
AATGATTCTCTCAAACATCG+TGG - chr1_1:67721057-67721076 None:intergenic 35.0%
! TGCATTAACCACTTTGTTGT+TGG + chr1_1:67721155-67721174 Msa0038310:intron 35.0%
TGTAATCTCCAACAACAAAG+TGG - chr1_1:67721166-67721185 None:intergenic 35.0%
TTGATTGGACCGTTCATATT+TGG + chr1_1:67721321-67721340 Msa0038310:intron 35.0%
GTTCATATTTGGTTGGATGT+TGG + chr1_1:67721332-67721351 Msa0038310:intron 35.0%
ATATTTGGTTGGATGTTGGT+AGG + chr1_1:67721336-67721355 Msa0038310:intron 35.0%
CATATGTTCAGCCAAAGAAA+TGG - chr1_1:67721657-67721676 None:intergenic 35.0%
! AGCATGATGATGATGATAGT+AGG + chr1_1:67719855-67719874 Msa0038310:CDS 35.0%
! TATGGTAATGACAATTCTGG+TGG + chr1_1:67720007-67720026 Msa0038310:CDS 35.0%
TCTGACATTAAAACAACCAC+TGG + chr1_1:67720292-67720311 Msa0038310:CDS 35.0%
AATGATTCTCTCAAACATCG+TGG - chr1_1:67721057-67721076 None:intergenic 35.0%
! TGCATTAACCACTTTGTTGT+TGG + chr1_1:67721155-67721174 Msa0038310:intron 35.0%
TGTAATCTCCAACAACAAAG+TGG - chr1_1:67721166-67721185 None:intergenic 35.0%
TTGATTGGACCGTTCATATT+TGG + chr1_1:67721321-67721340 Msa0038310:intron 35.0%
GTTCATATTTGGTTGGATGT+TGG + chr1_1:67721332-67721351 Msa0038310:intron 35.0%
ATATTTGGTTGGATGTTGGT+AGG + chr1_1:67721336-67721355 Msa0038310:intron 35.0%
CATATGTTCAGCCAAAGAAA+TGG - chr1_1:67721657-67721676 None:intergenic 35.0%
CATCATCATGCTTCTTGTGA+TGG - chr1_1:67719847-67719866 None:intergenic 40.0%
TAACCACTGTCAGTGTCTAT+AGG - chr1_1:67719881-67719900 None:intergenic 40.0%
ACAGGTGATGACTATGATTC+TGG + chr1_1:67719920-67719939 Msa0038310:CDS 40.0%
TTATTGTAACCACCACCAGA+TGG - chr1_1:67719980-67719999 None:intergenic 40.0%
AATGAAACATCTGGTGGCTA+TGG + chr1_1:67720076-67720095 Msa0038310:CDS 40.0%
TCTGACACTAAAACAACCAC+TGG + chr1_1:67720244-67720263 Msa0038310:CDS 40.0%
GACATTAAAACAACCACTGG+TGG + chr1_1:67720295-67720314 Msa0038310:CDS 40.0%
TCTGACACTAAAACAACCAC+TGG + chr1_1:67720244-67720263 Msa0038310:CDS 40.0%
GAGTCATGCTCAACAAGATT+AGG - chr1_1:67720998-67721017 None:intergenic 40.0%
CGCCCTAAGATTTCCATAAT+AGG + chr1_1:67721127-67721146 Msa0038310:intron 40.0%
TTGGACCGTTCATATTTGGT+TGG + chr1_1:67721325-67721344 Msa0038310:intron 40.0%
TTTCTCATGATGCTCATGGA+AGG - chr1_1:67721587-67721606 None:intergenic 40.0%
! CCTTTTTCTCATGATGCTCA+TGG - chr1_1:67721591-67721610 None:intergenic 40.0%
CCATGAGCATCATGAGAAAA+AGG + chr1_1:67721588-67721607 Msa0038310:CDS 40.0%
GAGGAAGAAGAAGAAGTTCA+TGG + chr1_1:67721619-67721638 Msa0038310:CDS 40.0%
! ATCTTCCAGTTTGCTTTGAG+TGG + chr1_1:67721795-67721814 Msa0038310:three_prime_UTR 40.0%
TTTGGAGAATGTTTCCAGCT+TGG + chr1_1:67721818-67721837 Msa0038310:three_prime_UTR 40.0%
ACATCTATATGACACCAAGC+TGG - chr1_1:67721835-67721854 None:intergenic 40.0%
CATCATCATGCTTCTTGTGA+TGG - chr1_1:67719847-67719866 None:intergenic 40.0%
TAACCACTGTCAGTGTCTAT+AGG - chr1_1:67719881-67719900 None:intergenic 40.0%
ACAGGTGATGACTATGATTC+TGG + chr1_1:67719920-67719939 Msa0038310:CDS 40.0%
TTATTGTAACCACCACCAGA+TGG - chr1_1:67719980-67719999 None:intergenic 40.0%
AATGAAACATCTGGTGGCTA+TGG + chr1_1:67720076-67720095 Msa0038310:CDS 40.0%
TCTGACACTAAAACAACCAC+TGG + chr1_1:67720244-67720263 Msa0038310:CDS 40.0%
GACATTAAAACAACCACTGG+TGG + chr1_1:67720295-67720314 Msa0038310:CDS 40.0%
TCTGACACTAAAACAACCAC+TGG + chr1_1:67720244-67720263 Msa0038310:CDS 40.0%
GAGTCATGCTCAACAAGATT+AGG - chr1_1:67720998-67721017 None:intergenic 40.0%
CGCCCTAAGATTTCCATAAT+AGG + chr1_1:67721127-67721146 Msa0038310:intron 40.0%
TTGGACCGTTCATATTTGGT+TGG + chr1_1:67721325-67721344 Msa0038310:intron 40.0%
TTTCTCATGATGCTCATGGA+AGG - chr1_1:67721587-67721606 None:intergenic 40.0%
! CCTTTTTCTCATGATGCTCA+TGG - chr1_1:67721591-67721610 None:intergenic 40.0%
CCATGAGCATCATGAGAAAA+AGG + chr1_1:67721588-67721607 Msa0038310:CDS 40.0%
GAGGAAGAAGAAGAAGTTCA+TGG + chr1_1:67721619-67721638 Msa0038310:CDS 40.0%
! ATCTTCCAGTTTGCTTTGAG+TGG + chr1_1:67721795-67721814 Msa0038310:three_prime_UTR 40.0%
TTTGGAGAATGTTTCCAGCT+TGG + chr1_1:67721818-67721837 Msa0038310:three_prime_UTR 40.0%
ACATCTATATGACACCAAGC+TGG - chr1_1:67721835-67721854 None:intergenic 40.0%
! CATGCTTCTTGTGATGGAAG+AGG - chr1_1:67719841-67719860 None:intergenic 45.0%
TACAATGATGACCAGCCATC+TGG + chr1_1:67719962-67719981 Msa0038310:CDS 45.0%
! TCTGGTGGTGACTATGAAAC+TGG + chr1_1:67720022-67720041 Msa0038310:CDS 45.0%
! TATGGTGCCAAAACAACCAC+TGG + chr1_1:67720094-67720113 Msa0038310:CDS 45.0%
CTCTGACACCAAAACAACCA+CGG + chr1_1:67720192-67720211 Msa0038310:CDS 45.0%
TCTGACACCAAAACAACCAC+GGG + chr1_1:67720193-67720212 Msa0038310:CDS 45.0%
GACACTAAAACAACCACTGG+CGG + chr1_1:67720247-67720266 Msa0038310:CDS 45.0%
GACACTAAAACAACCACTGG+AGG + chr1_1:67720247-67720266 Msa0038310:CDS 45.0%
ACTAAAACAACCACTGGAGG+CGG + chr1_1:67720349-67720368 Msa0038310:CDS 45.0%
! CAAGATGCTCATGTTTGCTG+TGG - chr1_1:67720477-67720496 None:intergenic 45.0%
CACAGCAAACATGAGCATCT+TGG + chr1_1:67720475-67720494 Msa0038310:CDS 45.0%
CATGAGCATCTTGGTGAGTT+AGG + chr1_1:67720484-67720503 Msa0038310:CDS 45.0%
AAACATCGTGGAACGACTCA+AGG - chr1_1:67721045-67721064 None:intergenic 45.0%
CCAAACCACTCAAAGCAAAC+TGG - chr1_1:67721803-67721822 None:intergenic 45.0%
! CCAGTTTGCTTTGAGTGGTT+TGG + chr1_1:67721800-67721819 Msa0038310:three_prime_UTR 45.0%
! CATGCTTCTTGTGATGGAAG+AGG - chr1_1:67719841-67719860 None:intergenic 45.0%
TACAATGATGACCAGCCATC+TGG + chr1_1:67719962-67719981 Msa0038310:CDS 45.0%
! TCTGGTGGTGACTATGAAAC+TGG + chr1_1:67720022-67720041 Msa0038310:CDS 45.0%
! TATGGTGCCAAAACAACCAC+TGG + chr1_1:67720094-67720113 Msa0038310:CDS 45.0%
CTCTGACACCAAAACAACCA+CGG + chr1_1:67720192-67720211 Msa0038310:CDS 45.0%
TCTGACACCAAAACAACCAC+GGG + chr1_1:67720193-67720212 Msa0038310:CDS 45.0%
GACACTAAAACAACCACTGG+CGG + chr1_1:67720247-67720266 Msa0038310:CDS 45.0%
GACACTAAAACAACCACTGG+AGG + chr1_1:67720247-67720266 Msa0038310:CDS 45.0%
ACTAAAACAACCACTGGAGG+CGG + chr1_1:67720349-67720368 Msa0038310:CDS 45.0%
! CAAGATGCTCATGTTTGCTG+TGG - chr1_1:67720477-67720496 None:intergenic 45.0%
CACAGCAAACATGAGCATCT+TGG + chr1_1:67720475-67720494 Msa0038310:CDS 45.0%
CATGAGCATCTTGGTGAGTT+AGG + chr1_1:67720484-67720503 Msa0038310:CDS 45.0%
AAACATCGTGGAACGACTCA+AGG - chr1_1:67721045-67721064 None:intergenic 45.0%
CCAAACCACTCAAAGCAAAC+TGG - chr1_1:67721803-67721822 None:intergenic 45.0%
! CCAGTTTGCTTTGAGTGGTT+TGG + chr1_1:67721800-67721819 Msa0038310:three_prime_UTR 45.0%
!! TTAAAAATAAATTTGTAAAA+TGG - chr1_1:67720874-67720893 None:intergenic 5.0%
!! GAAAAAAATATAAAAAAATA+AGG - chr1_1:67720901-67720920 None:intergenic 5.0%
!! TTAAAAATAAATTTGTAAAA+TGG - chr1_1:67720874-67720893 None:intergenic 5.0%
!! GAAAAAAATATAAAAAAATA+AGG - chr1_1:67720901-67720920 None:intergenic 5.0%
! TCTTGTGATGGAAGAGGCCA+CGG - chr1_1:67719835-67719854 None:intergenic 50.0%
AGGCCTATAGACACTGACAG+TGG + chr1_1:67719875-67719894 Msa0038310:CDS 50.0%
AATGATGACCAGCCATCTGG+TGG + chr1_1:67719965-67719984 Msa0038310:CDS 50.0%
GACTCTGACACCAAAACCAC+TGG + chr1_1:67720142-67720161 Msa0038310:CDS 50.0%
TCTGACACCAAAACCACTGG+TGG + chr1_1:67720145-67720164 Msa0038310:CDS 50.0%
!! AAAACCACTGGTGGTGGCTA+CGG + chr1_1:67720154-67720173 Msa0038310:CDS 50.0%
AAAACAACCACTGGCGGCTA+CGG + chr1_1:67720253-67720272 Msa0038310:CDS 50.0%
TCTGACACCAAAACCACCAC+CGG + chr1_1:67720394-67720413 Msa0038310:CDS 50.0%
ATCGTCACCATAACCACCAC+CGG - chr1_1:67720416-67720435 None:intergenic 50.0%
!! AGCTGCTGGTGGTTTTGCTT+TGG + chr1_1:67720513-67720532 Msa0038310:CDS 50.0%
AAGACCCAGAGAATGCTCAC+AGG + chr1_1:67721506-67721525 Msa0038310:CDS 50.0%
TGTGCCTGTGAGCATTCTCT+GGG - chr1_1:67721513-67721532 None:intergenic 50.0%
TTGTGCCTGTGAGCATTCTC+TGG - chr1_1:67721514-67721533 None:intergenic 50.0%
! TCTTGTGATGGAAGAGGCCA+CGG - chr1_1:67719835-67719854 None:intergenic 50.0%
AGGCCTATAGACACTGACAG+TGG + chr1_1:67719875-67719894 Msa0038310:CDS 50.0%
AATGATGACCAGCCATCTGG+TGG + chr1_1:67719965-67719984 Msa0038310:CDS 50.0%
GACTCTGACACCAAAACCAC+TGG + chr1_1:67720142-67720161 Msa0038310:CDS 50.0%
TCTGACACCAAAACCACTGG+TGG + chr1_1:67720145-67720164 Msa0038310:CDS 50.0%
!! AAAACCACTGGTGGTGGCTA+CGG + chr1_1:67720154-67720173 Msa0038310:CDS 50.0%
AAAACAACCACTGGCGGCTA+CGG + chr1_1:67720253-67720272 Msa0038310:CDS 50.0%
TCTGACACCAAAACCACCAC+CGG + chr1_1:67720394-67720413 Msa0038310:CDS 50.0%
ATCGTCACCATAACCACCAC+CGG - chr1_1:67720416-67720435 None:intergenic 50.0%
!! AGCTGCTGGTGGTTTTGCTT+TGG + chr1_1:67720513-67720532 Msa0038310:CDS 50.0%
AAGACCCAGAGAATGCTCAC+AGG + chr1_1:67721506-67721525 Msa0038310:CDS 50.0%
TGTGCCTGTGAGCATTCTCT+GGG - chr1_1:67721513-67721532 None:intergenic 50.0%
TTGTGCCTGTGAGCATTCTC+TGG - chr1_1:67721514-67721533 None:intergenic 50.0%
GATGAAGAGAACCGTAGCCG+TGG + chr1_1:67719815-67719834 Msa0038310:CDS 55.0%
TGTAACCACCACCAGATGGC+TGG - chr1_1:67719976-67719995 None:intergenic 55.0%
GGTGCCAAAACAACCACTGG+TGG + chr1_1:67720097-67720116 Msa0038310:CDS 55.0%
GCCAAAACAACCACTGGTGG+CGG + chr1_1:67720100-67720119 Msa0038310:CDS 55.0%
GACACCAAAACCACTGGTGG+TGG + chr1_1:67720148-67720167 Msa0038310:CDS 55.0%
! GTAGCCACCACCAGTGGTTT+TGG - chr1_1:67720155-67720174 None:intergenic 55.0%
GACACCAAAACAACCACGGG+TGG + chr1_1:67720196-67720215 Msa0038310:CDS 55.0%
ACCAAAACAACCACGGGTGG+CGG + chr1_1:67720199-67720218 Msa0038310:CDS 55.0%
!! GGCGGATATGGTGGTGGTTA+TGG + chr1_1:67720217-67720236 Msa0038310:CDS 55.0%
! ACAACCACTGGTGGCGACTA+CGG + chr1_1:67720304-67720323 Msa0038310:CDS 55.0%
AGTTGCAGAAGCAGCTGCAG+TGG + chr1_1:67721546-67721565 Msa0038310:CDS 55.0%
GTTGCAGAAGCAGCTGCAGT+GGG + chr1_1:67721547-67721566 Msa0038310:CDS 55.0%
GATGAAGAGAACCGTAGCCG+TGG + chr1_1:67719815-67719834 Msa0038310:CDS 55.0%
TGTAACCACCACCAGATGGC+TGG - chr1_1:67719976-67719995 None:intergenic 55.0%
GGTGCCAAAACAACCACTGG+TGG + chr1_1:67720097-67720116 Msa0038310:CDS 55.0%
GCCAAAACAACCACTGGTGG+CGG + chr1_1:67720100-67720119 Msa0038310:CDS 55.0%
GACACCAAAACCACTGGTGG+TGG + chr1_1:67720148-67720167 Msa0038310:CDS 55.0%
! GTAGCCACCACCAGTGGTTT+TGG - chr1_1:67720155-67720174 None:intergenic 55.0%
GACACCAAAACAACCACGGG+TGG + chr1_1:67720196-67720215 Msa0038310:CDS 55.0%
ACCAAAACAACCACGGGTGG+CGG + chr1_1:67720199-67720218 Msa0038310:CDS 55.0%
!! GGCGGATATGGTGGTGGTTA+TGG + chr1_1:67720217-67720236 Msa0038310:CDS 55.0%
! ACAACCACTGGTGGCGACTA+CGG + chr1_1:67720304-67720323 Msa0038310:CDS 55.0%
AGTTGCAGAAGCAGCTGCAG+TGG + chr1_1:67721546-67721565 Msa0038310:CDS 55.0%
GTTGCAGAAGCAGCTGCAGT+GGG + chr1_1:67721547-67721566 Msa0038310:CDS 55.0%
GATGGAAGAGGCCACGGCTA+CGG - chr1_1:67719829-67719848 None:intergenic 60.0%
GATGACCAGCCATCTGGTGG+TGG + chr1_1:67719968-67719987 Msa0038310:CDS 60.0%
! GCCGCCACCAGTGGTTGTTT+TGG - chr1_1:67720104-67720123 None:intergenic 60.0%
!! ACAACCACTGGTGGCGGCTA+CGG + chr1_1:67720106-67720125 Msa0038310:CDS 60.0%
! GGTGGCTACGGTGGTGGTTA+TGG + chr1_1:67720166-67720185 Msa0038310:CDS 60.0%
! TCCGCCACCCGTGGTTGTTT+TGG - chr1_1:67720203-67720222 None:intergenic 60.0%
!! ACAACCACGGGTGGCGGATA+TGG + chr1_1:67720205-67720224 Msa0038310:CDS 60.0%
! GGCGACTACGGTGGTGGTTA+TGG + chr1_1:67720316-67720335 Msa0038310:CDS 60.0%
ACAACCACTGGAGGCGGCTA+CGG + chr1_1:67720355-67720374 Msa0038310:CDS 60.0%
GACACCAAAACCACCACCGG+TGG + chr1_1:67720397-67720416 Msa0038310:CDS 60.0%
ACCAAAACCACCACCGGTGG+TGG + chr1_1:67720400-67720419 Msa0038310:CDS 60.0%
!! ACCACCACCGGTGGTGGTTT+TGG - chr1_1:67720404-67720423 None:intergenic 60.0%
! ACCACCACCGGTGGTGGTTA+TGG + chr1_1:67720406-67720425 Msa0038310:CDS 60.0%
ACCATAACCACCACCGGTGG+TGG - chr1_1:67720410-67720429 None:intergenic 60.0%
GTCACCATAACCACCACCGG+TGG - chr1_1:67720413-67720432 None:intergenic 60.0%
! GAGTTAGGTGCTGCAGCTGC+TGG + chr1_1:67720499-67720518 Msa0038310:CDS 60.0%
! TTAGGTGCTGCAGCTGCTGG+TGG + chr1_1:67720502-67720521 Msa0038310:CDS 60.0%
GAAGCAGCTGCAGTGGGATC+TGG + chr1_1:67721553-67721572 Msa0038310:CDS 60.0%
CAGCTGCAGTGGGATCTGGT+GGG + chr1_1:67721557-67721576 Msa0038310:CDS 60.0%
GATGGAAGAGGCCACGGCTA+CGG - chr1_1:67719829-67719848 None:intergenic 60.0%
GATGACCAGCCATCTGGTGG+TGG + chr1_1:67719968-67719987 Msa0038310:CDS 60.0%
! GCCGCCACCAGTGGTTGTTT+TGG - chr1_1:67720104-67720123 None:intergenic 60.0%
!! ACAACCACTGGTGGCGGCTA+CGG + chr1_1:67720106-67720125 Msa0038310:CDS 60.0%
! GGTGGCTACGGTGGTGGTTA+TGG + chr1_1:67720166-67720185 Msa0038310:CDS 60.0%
! TCCGCCACCCGTGGTTGTTT+TGG - chr1_1:67720203-67720222 None:intergenic 60.0%
!! ACAACCACGGGTGGCGGATA+TGG + chr1_1:67720205-67720224 Msa0038310:CDS 60.0%
! GGCGACTACGGTGGTGGTTA+TGG + chr1_1:67720316-67720335 Msa0038310:CDS 60.0%
ACAACCACTGGAGGCGGCTA+CGG + chr1_1:67720355-67720374 Msa0038310:CDS 60.0%
GACACCAAAACCACCACCGG+TGG + chr1_1:67720397-67720416 Msa0038310:CDS 60.0%
ACCAAAACCACCACCGGTGG+TGG + chr1_1:67720400-67720419 Msa0038310:CDS 60.0%
!! ACCACCACCGGTGGTGGTTT+TGG - chr1_1:67720404-67720423 None:intergenic 60.0%
! ACCACCACCGGTGGTGGTTA+TGG + chr1_1:67720406-67720425 Msa0038310:CDS 60.0%
ACCATAACCACCACCGGTGG+TGG - chr1_1:67720410-67720429 None:intergenic 60.0%
GTCACCATAACCACCACCGG+TGG - chr1_1:67720413-67720432 None:intergenic 60.0%
! GAGTTAGGTGCTGCAGCTGC+TGG + chr1_1:67720499-67720518 Msa0038310:CDS 60.0%
! TTAGGTGCTGCAGCTGCTGG+TGG + chr1_1:67720502-67720521 Msa0038310:CDS 60.0%
GAAGCAGCTGCAGTGGGATC+TGG + chr1_1:67721553-67721572 Msa0038310:CDS 60.0%
CAGCTGCAGTGGGATCTGGT+GGG + chr1_1:67721557-67721576 Msa0038310:CDS 60.0%
!! ACCACTGGTGGTGGCTACGG+TGG + chr1_1:67720157-67720176 Msa0038310:CDS 65.0%
ACCACCGTAGCCACCACCAG+TGG - chr1_1:67720161-67720180 None:intergenic 65.0%
!! ACTGGTGGTGGCTACGGTGG+TGG + chr1_1:67720160-67720179 Msa0038310:CDS 65.0%
!! ACCACGGGTGGCGGATATGG+TGG + chr1_1:67720208-67720227 Msa0038310:CDS 65.0%
ACCACCATATCCGCCACCCG+TGG - chr1_1:67720212-67720231 None:intergenic 65.0%
!! ACGGGTGGCGGATATGGTGG+TGG + chr1_1:67720211-67720230 Msa0038310:CDS 65.0%
ACAACCACTGGCGGCTACGG+TGG + chr1_1:67720256-67720275 Msa0038310:CDS 65.0%
! GGCGGCTACGGTGGTGGTTA+TGG + chr1_1:67720265-67720284 Msa0038310:CDS 65.0%
! ACCACTGGTGGCGACTACGG+TGG + chr1_1:67720307-67720326 Msa0038310:CDS 65.0%
ACCACCGTAGTCGCCACCAG+TGG - chr1_1:67720311-67720330 None:intergenic 65.0%
! ACTGGTGGCGACTACGGTGG+TGG + chr1_1:67720310-67720329 Msa0038310:CDS 65.0%
!! GGCGGCTACGGTGGTGGATA+TGG + chr1_1:67720367-67720386 Msa0038310:CDS 65.0%
GCAGCTGCAGTGGGATCTGG+TGG + chr1_1:67721556-67721575 Msa0038310:CDS 65.0%
!! ACCACTGGTGGTGGCTACGG+TGG + chr1_1:67720157-67720176 Msa0038310:CDS 65.0%
ACCACCGTAGCCACCACCAG+TGG - chr1_1:67720161-67720180 None:intergenic 65.0%
!! ACTGGTGGTGGCTACGGTGG+TGG + chr1_1:67720160-67720179 Msa0038310:CDS 65.0%
!! ACCACGGGTGGCGGATATGG+TGG + chr1_1:67720208-67720227 Msa0038310:CDS 65.0%
ACCACCATATCCGCCACCCG+TGG - chr1_1:67720212-67720231 None:intergenic 65.0%
!! ACGGGTGGCGGATATGGTGG+TGG + chr1_1:67720211-67720230 Msa0038310:CDS 65.0%
ACAACCACTGGCGGCTACGG+TGG + chr1_1:67720256-67720275 Msa0038310:CDS 65.0%
! GGCGGCTACGGTGGTGGTTA+TGG + chr1_1:67720265-67720284 Msa0038310:CDS 65.0%
! ACCACTGGTGGCGACTACGG+TGG + chr1_1:67720307-67720326 Msa0038310:CDS 65.0%
ACCACCGTAGTCGCCACCAG+TGG - chr1_1:67720311-67720330 None:intergenic 65.0%
! ACTGGTGGCGACTACGGTGG+TGG + chr1_1:67720310-67720329 Msa0038310:CDS 65.0%
!! GGCGGCTACGGTGGTGGATA+TGG + chr1_1:67720367-67720386 Msa0038310:CDS 65.0%
GCAGCTGCAGTGGGATCTGG+TGG + chr1_1:67721556-67721575 Msa0038310:CDS 65.0%
!! ACCACTGGTGGCGGCTACGG+CGG + chr1_1:67720109-67720128 Msa0038310:CDS 70.0%
GGCGGCTACGGCGGTGGTTA+TGG + chr1_1:67720118-67720137 Msa0038310:CDS 70.0%
ACCACTGGCGGCTACGGTGG+TGG + chr1_1:67720259-67720278 Msa0038310:CDS 70.0%
ACCACCACCGTAGCCGCCAG+TGG - chr1_1:67720263-67720282 None:intergenic 70.0%
ACCACTGGAGGCGGCTACGG+TGG + chr1_1:67720358-67720377 Msa0038310:CDS 70.0%
ACCACCGTAGCCGCCTCCAG+TGG - chr1_1:67720362-67720381 None:intergenic 70.0%
ACTGGAGGCGGCTACGGTGG+TGG + chr1_1:67720361-67720380 Msa0038310:CDS 70.0%
!! ACCACTGGTGGCGGCTACGG+CGG + chr1_1:67720109-67720128 Msa0038310:CDS 70.0%
GGCGGCTACGGCGGTGGTTA+TGG + chr1_1:67720118-67720137 Msa0038310:CDS 70.0%
ACCACTGGCGGCTACGGTGG+TGG + chr1_1:67720259-67720278 Msa0038310:CDS 70.0%
ACCACCACCGTAGCCGCCAG+TGG - chr1_1:67720263-67720282 None:intergenic 70.0%
ACCACTGGAGGCGGCTACGG+TGG + chr1_1:67720358-67720377 Msa0038310:CDS 70.0%
ACCACCGTAGCCGCCTCCAG+TGG - chr1_1:67720362-67720381 None:intergenic 70.0%
ACTGGAGGCGGCTACGGTGG+TGG + chr1_1:67720361-67720380 Msa0038310:CDS 70.0%
ACCGCCGTAGCCGCCACCAG+TGG - chr1_1:67720113-67720132 None:intergenic 75.0%
!! ACTGGTGGCGGCTACGGCGG+TGG + chr1_1:67720112-67720131 Msa0038310:CDS 75.0%
ACCGCCGTAGCCGCCACCAG+TGG - chr1_1:67720113-67720132 None:intergenic 75.0%
!! ACTGGTGGCGGCTACGGCGG+TGG + chr1_1:67720112-67720131 Msa0038310:CDS 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 67719809 67721983 67719809 ID=Msa0038310;Name=Msa0038310
chr1_1 mRNA 67719809 67721983 67719809 ID=Msa0038310-mRNA-1;Parent=Msa0038310;Name=Msa0038310-mRNA-1;_AED=0.00;_eAED=0.07;_QI=0|1|0.5|1|1|1|2|314|303
chr1_1 exon 67719809 67720534 67719809 ID=Msa0038310-mRNA-1:exon:22009;Parent=Msa0038310-mRNA-1
chr1_1 exon 67721484 67721983 67721484 ID=Msa0038310-mRNA-1:exon:22010;Parent=Msa0038310-mRNA-1
chr1_1 CDS 67719809 67720534 67719809 ID=Msa0038310-mRNA-1:cds;Parent=Msa0038310-mRNA-1
chr1_1 CDS 67721484 67721669 67721484 ID=Msa0038310-mRNA-1:cds;Parent=Msa0038310-mRNA-1
chr1_1 three_prime_UTR 67721670 67721983 67721670 ID=Msa0038310-mRNA-1:three_prime_utr;Parent=Msa0038310-mRNA-1
Gene Sequence

>Msa0038310

ATGTCTGATGAAGAGAACCGTAGCCGTGGCCTCTTCCATCACAAGAAGCATGATGATGATGATAGTAGGCCTATAGACACTGACAGTGGTTACAACAAAACATCATACTCTACAGGTGATGACTATGATTCTGGTTATAACAAAAAAACATCGTACAATGATGACCAGCCATCTGGTGGTGGTTACAATAAAACATCATATGGTAATGACAATTCTGGTGGTGACTATGAAACTGGTCACAATAAGAACACTGATAATTACTCTAATAATGAAACATCTGGTGGCTATGGTGCCAAAACAACCACTGGTGGCGGCTACGGCGGTGGTTATGGTGACTCTGACACCAAAACCACTGGTGGTGGCTACGGTGGTGGTTATGGTGACTCTGACACCAAAACAACCACGGGTGGCGGATATGGTGGTGGTTATGGTGACTCTGACACTAAAACAACCACTGGCGGCTACGGTGGTGGTTATGGTGACTCTGACATTAAAACAACCACTGGTGGCGACTACGGTGGTGGTTATGGTGACTCTGACACTAAAACAACCACTGGAGGCGGCTACGGTGGTGGATATGGTGACTCTGACACCAAAACCACCACCGGTGGTGGTTATGGTGACGATCGTCGTGATGATGTTGATTATAAGAAGGAGGAGAAACACCACAGCAAACATGAGCATCTTGGTGAGTTAGGTGCTGCAGCTGCTGGTGGTTTTGCTTTGTATGAGAAGCAAAAGTCAGAGAAAGACCCAGAGAATGCTCACAGGCACAAGACAGAAGAAGAAGTTGCAGAAGCAGCTGCAGTGGGATCTGGTGGGTTCGCCTTCCATGAGCATCATGAGAAAAAGGAAACAAAAGAGGAAGAAGAAGAAGTTCATGGAAAGAAGAAACACCATTTCTTTGGCTGA

Protein sequence

>Msa0038310

MSDEENRSRGLFHHKKHDDDDSRPIDTDSGYNKTSYSTGDDYDSGYNKKTSYNDDQPSGGGYNKTSYGNDNSGGDYETGHNKNTDNYSNNETSGGYGAKTTTGGGYGGGYGDSDTKTTGGGYGGGYGDSDTKTTTGGGYGGGYGDSDTKTTTGGYGGGYGDSDIKTTTGGDYGGGYGDSDTKTTTGGGYGGGYGDSDTKTTTGGGYGDDRRDDVDYKKEEKHHSKHEHLGELGAAAAGGFALYEKQKSEKDPENAHRHKTEEEVAEAAAVGSGGFAFHEHHEKKETKEEEEEVHGKKKHHFFG*