AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0464300


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0464300 MtrunA17_Chr3g0115741 96.275 510 19 0 1 510 1 510 0.0 991
Msa0464300 MtrunA17_Chr3g0115751 88.867 512 55 1 1 510 1 512 0.0 924
Msa0464300 MtrunA17_Chr3g0115781 80.980 510 96 1 1 510 1 509 0.0 853
Msa0464300 MtrunA17_Chr3g0115721 78.431 510 107 1 1 510 1 507 0.0 827
Msa0464300 MtrunA17_Chr3g0115731 71.569 510 107 5 1 503 1 479 0.0 721
Msa0464300 MtrunA17_Chr3g0115711 68.725 502 153 3 1 502 1 498 0.0 719
Msa0464300 MtrunA17_Chr3g0078971 52.590 502 229 7 12 508 9 506 0.0 549
Msa0464300 MtrunA17_Chr5g0394341 50.909 495 231 8 20 508 16 504 0.0 531
Msa0464300 MtrunA17_Chr4g0065311 52.083 480 225 4 20 498 15 490 0.0 529
Msa0464300 MtrunA17_Chr3g0078991 52.929 495 225 6 10 500 8 498 0.0 529
Msa0464300 MtrunA17_Chr5g0445601 53.012 498 228 5 1 496 1 494 0.0 520
Msa0464300 MtrunA17_Chr7g0257631 52.610 498 230 5 1 496 35 528 2.57e-179 514
Msa0464300 MtrunA17_Chr5g0437021 50.710 493 236 4 20 507 17 507 6.68e-176 504
Msa0464300 MtrunA17_Chr4g0065324 50.837 478 230 4 20 496 23 496 1.08e-175 504
Msa0464300 MtrunA17_Chr5g0420841 48.214 504 254 5 8 506 3 504 2.90e-174 500
Msa0464300 MtrunA17_Chr1g0164851 49.896 483 238 3 20 500 17 497 3.55e-174 501
Msa0464300 MtrunA17_Chr1g0164871 49.689 483 239 3 20 500 17 497 5.45e-174 500
Msa0464300 MtrunA17_Chr5g0417611 48.638 514 254 6 1 509 1 509 3.46e-172 495
Msa0464300 MtrunA17_Chr3g0128081 48.928 513 251 6 1 508 1 507 3.53e-170 490
Msa0464300 MtrunA17_Chr1g0205681 47.233 506 256 7 1 501 1 500 7.67e-169 486
Msa0464300 MtrunA17_Chr3g0085971 47.305 501 257 5 13 508 8 506 1.03e-166 481
Msa0464300 MtrunA17_Chr4g0048411 51.534 489 231 5 20 504 17 503 2.76e-166 480
Msa0464300 MtrunA17_Chr1g0205671 47.036 506 256 8 1 501 1 499 1.09e-165 478
Msa0464300 MtrunA17_Chr1g0205691 48.745 478 235 7 32 503 28 501 2.55e-165 478
Msa0464300 MtrunA17_Chr8g0390261 48.374 492 245 8 21 509 21 506 1.12e-164 476
Msa0464300 MtrunA17_Chr8g0390141 47.571 494 251 7 21 510 21 510 3.83e-162 470
Msa0464300 MtrunA17_Chr6g0486681 46.784 513 265 8 1 509 1 509 4.54e-162 469
Msa0464300 MtrunA17_Chr6g0486671 46.784 513 265 8 1 509 1 509 4.54e-162 469
Msa0464300 MtrunA17_Chr4g0048051 50.710 493 236 6 20 508 17 506 2.75e-154 449
Msa0464300 MtrunA17_Chr3g0128171 47.903 453 228 5 53 499 1 451 4.53e-152 442
Msa0464300 MtrunA17_Chr3g0078791 47.465 434 203 5 74 504 17 428 1.11e-143 420
Msa0464300 MtrunA17_Chr3g0115771 59.744 313 81 4 153 464 5 273 2.41e-118 349
Msa0464300 MtrunA17_Chr4g0065351 49.708 342 167 4 163 503 1 338 8.61e-116 346
Msa0464300 MtrunA17_Chr4g0036021 30.041 486 294 10 30 494 31 491 4.04e-58 201
Msa0464300 MtrunA17_Chr6g0485661 30.652 460 287 9 31 480 63 500 3.86e-57 198
Msa0464300 MtrunA17_Chr4g0034681 28.000 500 314 9 30 508 34 508 8.97e-57 197
Msa0464300 MtrunA17_Chr8g0390521 27.778 486 316 9 17 490 9 471 5.06e-54 189
Msa0464300 MtrunA17_Chr8g0373531 30.816 490 284 12 31 493 24 485 2.11e-53 187
Msa0464300 MtrunA17_Chr3g0144361 27.066 484 310 7 30 492 32 493 4.34e-51 182
Msa0464300 MtrunA17_Chr2g0282031 29.325 474 299 10 27 490 53 500 2.36e-50 180
Msa0464300 MtrunA17_Chr5g0432581 27.869 488 301 10 31 493 24 485 9.93e-48 172
Msa0464300 MtrunA17_Chr3g0115761 72.727 110 30 0 53 162 1 110 1.69e-47 160
Msa0464300 MtrunA17_Chr8g0373181 26.824 466 315 5 21 486 42 481 4.25e-47 170
Msa0464300 MtrunA17_Chr4g0039651 28.361 476 300 13 27 486 46 496 1.12e-45 167
Msa0464300 MtrunA17_Chr4g0021771 25.703 498 321 13 23 507 51 512 7.39e-45 165
Msa0464300 MtrunA17_Chr4g0065341 51.852 135 65 0 20 154 21 155 7.28e-43 150
Msa0464300 MtrunA17_Chr7g0259471 28.224 411 275 8 82 488 77 471 3.40e-42 157
Msa0464300 MtrunA17_Chr6g0457781 26.004 473 311 8 20 486 99 538 1.41e-41 156
Msa0464300 MtrunA17_Chr8g0373191 26.781 407 261 5 85 486 79 453 1.16e-40 152
Msa0464300 MtrunA17_Chr4g0032021 29.193 483 298 15 25 488 95 552 2.86e-40 153
Msa0464300 MtrunA17_Chr2g0286721 24.899 494 317 10 8 486 25 479 6.37e-40 150
Msa0464300 MtrunA17_Chr7g0250881 25.702 463 301 9 32 486 71 498 1.29e-39 150
Msa0464300 MtrunA17_Chr1g0213631 26.735 389 276 6 109 493 52 435 2.65e-39 148
Msa0464300 MtrunA17_Chr1g0213611 26.371 474 321 11 28 493 78 531 5.12e-39 149
Msa0464300 MtrunA17_Chr4g0066581 26.055 403 285 5 85 486 92 482 1.43e-38 147
Msa0464300 MtrunA17_Chr5g0403831 26.852 432 279 10 93 493 73 498 1.55e-38 147
Msa0464300 MtrunA17_Chr7g0259221 28.818 406 269 8 85 486 82 471 3.21e-38 145
Msa0464300 MtrunA17_Chr2g0303731 29.598 348 214 6 33 370 33 359 5.52e-38 147
Msa0464300 MtrunA17_Chr7g0214451 25.536 466 321 9 32 493 39 482 1.46e-37 144
Msa0464300 MtrunA17_Chr1g0155221 25.428 409 285 4 85 486 89 484 1.39e-36 141
Msa0464300 MtrunA17_Chr8g0376631 31.402 328 202 6 33 354 33 343 2.00e-36 142
Msa0464300 MtrunA17_Chr2g0303701 29.619 341 218 6 33 368 33 356 2.23e-36 142
Msa0464300 MtrunA17_Chr5g0446681 42.935 184 66 2 1 184 1 145 6.48e-35 132
Msa0464300 MtrunA17_Chr5g0446681 47.260 146 74 2 359 501 135 280 3.70e-33 127
Msa0464300 MtrunA17_Chr7g0273281 23.769 467 315 8 25 486 61 491 1.91e-33 132
Msa0464300 MtrunA17_Chr8g0376611 32.400 250 162 4 109 352 26 274 2.61e-33 132
Msa0464300 MtrunA17_Chr8g0376601 28.889 360 229 7 1 352 1 341 3.44e-33 132
Msa0464300 MtrunA17_Chr4g0004821 26.053 380 264 6 110 486 103 468 1.14e-30 124
Msa0464300 MtrunA17_Chr7g0228781 41.279 172 64 4 20 154 32 203 1.38e-30 118
Msa0464300 MtrunA17_Chr2g0290181 27.557 352 229 6 33 375 34 368 8.72e-29 120
Msa0464300 MtrunA17_Chr3g0119401 25.813 461 307 12 31 486 98 528 4.93e-28 117
Msa0464300 MtrunA17_Chr6g0486021 23.947 380 272 6 110 486 117 482 2.98e-27 114
Msa0464300 MtrunA17_Chr2g0290161 27.881 269 158 6 110 369 28 269 5.14e-24 105
Msa0464300 MtrunA17_Chr3g0121674 24.324 296 209 6 205 493 2 289 1.25e-21 95.5
Msa0464300 MtrunA17_Chr5g0434231 30.114 176 98 2 84 259 4 154 4.79e-20 87.0
Msa0464300 MtrunA17_Chr3g0144261 30.460 174 114 4 105 274 64 234 2.16e-18 88.6
Msa0464300 MtrunA17_Chr3g0146061 29.444 180 124 3 97 274 58 236 2.68e-17 85.1
Msa0464300 MtrunA17_Chr5g0407441 25.862 290 183 9 24 310 2 262 3.68e-17 84.7
Msa0464300 MtrunA17_Chr5g0404191 23.574 263 176 5 23 284 47 285 6.21e-17 81.6
Msa0464300 MtrunA17_Chr8g0370141 27.778 234 147 6 26 256 4 218 8.04e-17 82.4
Msa0464300 MtrunA17_Chr5g0419321 30.058 173 118 3 86 256 75 246 2.01e-16 82.4
Msa0464300 MtrunA17_Chr7g0273261 25.210 238 158 6 255 486 10 233 1.05e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0464300 AT1G34580.1 61.508 504 189 3 1 501 1 502 0.0 638
Msa0464300 AT1G34580.2 61.283 452 172 2 53 501 1 452 0.0 579
Msa0464300 AT5G26340.1 50.586 512 242 8 1 507 1 506 0.0 535
Msa0464300 AT1G11260.1 53.971 491 218 6 20 506 17 503 0.0 532
Msa0464300 AT4G02050.2 49.511 511 252 5 1 509 1 507 0.0 524
Msa0464300 AT4G02050.1 49.511 511 252 5 1 509 1 507 0.0 524
Msa0464300 AT3G19940.1 50.888 507 243 6 1 505 1 503 0.0 521
Msa0464300 AT3G19930.1 52.079 505 235 5 1 503 1 500 0.0 518
Msa0464300 AT3G19930.2 52.079 505 235 5 1 503 1 500 0.0 518
Msa0464300 AT1G50310.1 50.581 516 245 7 1 509 1 513 8.20e-180 515
Msa0464300 AT4G21480.1 51.927 493 233 4 13 503 10 500 2.10e-177 508
Msa0464300 AT5G23270.1 51.587 504 234 7 1 499 1 499 3.40e-176 506
Msa0464300 AT5G61520.1 46.881 497 253 5 19 508 17 509 2.60e-165 478
Msa0464300 AT1G77210.2 45.957 507 267 7 1 504 1 503 6.40e-161 466
Msa0464300 AT1G77210.1 45.957 507 267 7 1 504 1 503 6.40e-161 466
Msa0464300 AT5G26250.1 45.714 490 260 5 20 507 16 501 6.27e-157 456
Msa0464300 AT3G05960.1 46.029 491 259 5 20 508 15 501 8.52e-156 454
Msa0464300 AT5G61520.2 45.905 464 240 5 52 508 2 461 9.48e-149 434
Msa0464300 AT1G07340.1 45.473 486 254 7 21 501 18 497 1.17e-139 412
Msa0464300 AT1G50310.2 50.000 362 173 5 154 509 11 370 3.65e-126 373
Msa0464300 AT1G77210.3 43.059 353 195 6 154 504 6 354 2.21e-106 322
Msa0464300 AT2G16120.1 30.579 484 295 9 30 493 30 492 5.96e-61 209
Msa0464300 AT2G16130.1 29.652 489 293 10 30 493 30 492 3.47e-59 204
Msa0464300 AT3G18830.1 28.279 488 303 10 30 494 40 503 2.90e-55 194
Msa0464300 AT2G18480.1 29.895 475 282 11 40 490 36 483 8.79e-54 189
Msa0464300 AT4G36670.1 28.200 500 306 11 30 505 21 491 5.25e-50 179
Msa0464300 AT1G75220.1 25.910 467 320 4 23 489 45 485 5.96e-45 165
Msa0464300 AT1G08900.5 28.395 405 276 5 85 488 23 414 2.56e-44 162
Msa0464300 AT1G08900.3 28.395 405 276 5 85 488 57 448 4.57e-44 162
Msa0464300 AT1G08900.1 28.395 405 276 5 85 488 65 456 6.04e-44 162
Msa0464300 AT1G08900.2 28.395 405 276 5 85 488 65 456 6.04e-44 162
Msa0464300 AT2G48020.2 28.186 408 275 7 85 489 68 460 1.02e-43 161
Msa0464300 AT2G48020.1 28.186 408 275 7 85 489 68 460 1.02e-43 161
Msa0464300 AT2G20780.1 26.625 477 306 12 23 486 51 496 8.27e-42 157
Msa0464300 AT1G19450.1 25.641 468 322 4 23 490 46 487 1.13e-41 156
Msa0464300 AT5G16150.2 26.247 461 301 8 32 486 111 538 1.17e-41 157
Msa0464300 AT5G16150.1 26.247 461 301 8 32 486 111 538 1.17e-41 157
Msa0464300 AT5G16150.3 26.247 461 301 8 32 486 111 538 1.17e-41 157
Msa0464300 AT5G17010.1 28.392 479 296 11 27 486 48 498 5.49e-41 154
Msa0464300 AT5G17010.3 28.392 479 296 11 27 486 48 498 5.49e-41 154
Msa0464300 AT5G17010.4 28.392 479 296 11 27 486 48 498 5.49e-41 154
Msa0464300 AT2G20780.2 27.139 409 274 8 90 486 42 438 2.84e-40 152
Msa0464300 AT5G59250.1 28.484 488 295 14 25 488 97 554 6.23e-40 152
Msa0464300 AT1G08930.1 25.160 469 320 5 21 489 53 490 1.34e-39 150
Msa0464300 AT1G08930.2 25.160 469 320 5 21 489 53 490 1.34e-39 150
Msa0464300 AT1G08890.1 25.370 473 320 8 21 492 22 462 5.02e-39 148
Msa0464300 AT5G27350.1 26.282 468 310 7 21 486 26 460 9.57e-39 147
Msa0464300 AT1G08900.4 29.191 346 231 5 85 429 65 397 2.17e-38 145
Msa0464300 AT3G05165.3 25.855 468 312 7 21 486 25 459 3.77e-38 145
Msa0464300 AT3G05165.2 25.855 468 312 7 21 486 25 459 3.77e-38 145
Msa0464300 AT3G05165.1 25.855 468 312 7 21 486 25 459 3.77e-38 145
Msa0464300 AT1G30220.1 30.769 351 213 7 33 377 35 361 7.33e-38 147
Msa0464300 AT3G05155.1 26.173 405 279 8 85 486 67 454 7.90e-38 144
Msa0464300 AT3G05160.3 26.750 400 281 4 87 486 14 401 1.16e-37 143
Msa0464300 AT3G05160.2 26.750 400 281 4 87 486 14 401 1.16e-37 143
Msa0464300 AT3G05160.1 25.322 466 317 6 21 486 16 450 1.22e-37 144
Msa0464300 AT1G54730.2 26.247 461 304 9 32 489 38 465 1.63e-37 144
Msa0464300 AT3G05400.1 27.114 402 281 5 85 486 66 455 2.59e-37 143
Msa0464300 AT3G03090.1 28.238 471 293 12 34 486 55 498 7.91e-37 142
Msa0464300 AT2G43330.1 24.580 476 323 10 30 495 35 484 1.15e-35 139
Msa0464300 AT4G04760.3 27.007 411 281 6 85 490 12 408 2.51e-35 137
Msa0464300 AT4G04750.1 26.406 409 281 5 85 488 76 469 2.64e-35 138
Msa0464300 AT4G04750.2 26.406 409 281 5 85 488 76 469 2.64e-35 138
Msa0464300 AT4G04760.1 27.007 411 281 6 85 490 71 467 4.63e-35 137
Msa0464300 AT5G18840.1 24.390 410 283 6 85 486 84 474 4.74e-35 137
Msa0464300 AT3G05400.2 28.726 369 250 6 119 486 79 435 6.75e-35 136
Msa0464300 AT4G04750.3 26.406 409 281 5 85 488 120 513 7.93e-35 137
Msa0464300 AT3G05165.6 25.428 409 274 6 21 429 25 402 2.33e-34 135
Msa0464300 AT3G05165.4 26.034 411 269 7 21 429 25 402 5.99e-34 134
Msa0464300 AT3G05165.5 26.034 411 269 7 21 429 25 402 5.99e-34 134
Msa0464300 AT5G27360.1 23.718 468 322 6 21 486 30 464 8.49e-34 134
Msa0464300 AT1G54730.3 26.202 416 272 8 32 445 38 420 1.09e-33 132
Msa0464300 AT1G54730.5 25.708 459 288 9 32 489 38 444 1.44e-33 132
Msa0464300 AT5G27360.3 23.718 468 322 6 21 486 78 512 1.61e-33 134
Msa0464300 AT3G05150.2 24.532 481 327 10 12 489 21 468 1.15e-32 130
Msa0464300 AT3G05150.1 24.686 478 324 10 12 486 21 465 1.21e-32 130
Msa0464300 AT3G05150.3 24.686 478 324 10 12 486 21 465 1.21e-32 130
Msa0464300 AT4G16480.2 27.548 363 229 7 23 372 24 365 2.90e-32 130
Msa0464300 AT4G16480.3 27.548 363 229 7 23 372 24 365 2.90e-32 130
Msa0464300 AT4G16480.1 27.548 363 229 7 23 372 24 365 2.90e-32 130
Msa0464300 AT4G04760.2 25.672 409 286 6 85 490 71 464 1.01e-31 127
Msa0464300 AT5G27360.2 25.070 355 254 5 132 486 18 360 2.03e-30 122
Msa0464300 AT5G27360.5 25.070 355 254 5 132 486 18 360 2.03e-30 122
Msa0464300 AT1G54730.4 25.604 414 256 8 32 445 38 399 7.53e-30 121
Msa0464300 AT1G79820.2 26.866 402 265 11 92 486 107 486 2.54e-29 121
Msa0464300 AT1G79820.1 26.866 402 265 11 92 486 107 486 2.54e-29 121
Msa0464300 AT1G67300.2 26.286 350 231 7 99 439 107 438 2.04e-28 118
Msa0464300 AT2G48020.4 27.915 283 195 4 85 366 68 342 2.94e-28 116
Msa0464300 AT1G54730.9 25.980 408 265 9 32 437 38 410 4.60e-28 116
Msa0464300 AT1G54730.7 25.980 408 265 9 32 437 38 410 4.60e-28 116
Msa0464300 AT1G67300.1 26.857 350 228 7 99 439 107 437 6.38e-28 117
Msa0464300 AT1G67300.3 26.857 350 228 7 99 439 107 437 6.38e-28 117
Msa0464300 AT2G48020.3 27.778 270 187 3 85 354 68 329 2.27e-27 113
Msa0464300 AT1G67300.6 26.361 349 229 7 99 438 107 436 2.58e-27 114
Msa0464300 AT1G67300.7 26.361 349 229 7 99 438 107 436 2.58e-27 114
Msa0464300 AT3G20460.1 25.871 402 286 5 85 486 93 482 2.68e-27 115
Msa0464300 AT2G35740.1 25.275 364 236 9 26 375 26 367 3.07e-27 115
Msa0464300 AT3G05155.2 26.296 270 188 3 85 354 67 325 2.53e-26 109
Msa0464300 AT1G67300.4 26.901 342 222 7 99 431 107 429 2.68e-26 111
Msa0464300 AT1G67300.5 26.901 342 222 7 99 431 107 429 2.68e-26 111
Msa0464300 AT1G05030.1 25.325 462 305 13 32 486 85 513 4.78e-26 112
Msa0464300 AT1G79820.4 26.361 349 233 9 92 436 107 435 8.66e-26 110
Msa0464300 AT1G54730.11 26.625 323 210 6 32 354 38 333 1.50e-25 107
Msa0464300 AT1G08920.1 24.265 408 285 6 85 486 72 461 2.00e-25 109
Msa0464300 AT1G05030.2 25.432 405 278 10 90 486 73 461 2.52e-25 109
Msa0464300 AT1G54730.10 26.846 298 194 5 32 329 38 311 5.40e-25 105
Msa0464300 AT1G54730.6 26.846 298 194 5 32 329 38 311 5.40e-25 105
Msa0464300 AT1G54730.8 26.846 298 194 5 32 329 38 311 2.06e-24 105
Msa0464300 AT1G08920.2 22.469 405 303 4 85 486 72 468 2.11e-24 106
Msa0464300 AT5G27360.4 21.975 405 281 6 21 423 30 401 3.34e-23 102
Msa0464300 AT1G08920.3 24.501 351 241 6 85 429 72 404 3.07e-22 99.8
Msa0464300 AT5G17010.2 26.004 473 241 16 34 486 52 435 3.64e-22 99.4
Msa0464300 AT3G51490.1 26.587 252 165 6 25 274 3 236 4.18e-20 94.4
Msa0464300 AT3G51490.2 26.587 252 165 6 25 274 3 236 4.45e-20 94.4
Msa0464300 AT4G35300.9 32.086 187 123 4 90 274 52 236 2.95e-19 91.7
Msa0464300 AT4G35300.2 32.086 187 123 4 90 274 52 236 2.95e-19 91.7
Msa0464300 AT4G35300.3 32.086 187 123 4 90 274 52 236 2.95e-19 91.7
Msa0464300 AT4G35300.4 32.086 187 123 4 90 274 52 236 3.32e-19 91.7
Msa0464300 AT4G35300.8 32.086 187 123 4 90 274 52 236 3.32e-19 91.7
Msa0464300 AT4G35300.6 32.086 187 123 4 90 274 52 236 3.32e-19 91.7
Msa0464300 AT4G35300.11 32.086 187 123 4 90 274 52 236 3.32e-19 91.7
Msa0464300 AT4G35300.1 32.086 187 123 4 90 274 52 236 3.32e-19 91.7
Msa0464300 AT4G35300.10 32.086 187 123 4 90 274 52 236 3.32e-19 91.7
Msa0464300 AT4G35300.7 32.086 187 123 4 90 274 52 236 3.32e-19 91.7
Msa0464300 AT3G51490.3 28.877 187 129 4 90 274 2 186 3.37e-19 91.7
Msa0464300 AT1G20840.2 28.436 211 141 4 78 279 30 239 8.21e-19 90.5
Msa0464300 AT1G20840.1 28.436 211 141 4 78 279 30 239 8.21e-19 90.5
Msa0464300 AT1G79820.3 24.000 400 231 10 92 486 107 438 2.77e-18 87.8
Msa0464300 AT1G79820.5 23.352 364 210 9 128 486 77 376 1.35e-14 75.9

Find 112 sgRNAs with CRISPR-Local

Find 348 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATATTCCCATGCTCATTT+TGG 0.112731 3_3:+64105702 Msa0464300:CDS
GGATATGACATTGGAATTTC+AGG 0.174947 3_3:+64105306 Msa0464300:CDS
CCTGTGGTTCTTATATTTAC+AGG 0.188974 3_3:-64106936 None:intergenic
TTAAAAGCGCCTCGCCATTT+TGG 0.225068 3_3:-64106064 None:intergenic
TGTTTATACTCTGCTGGTTT+TGG 0.264387 3_3:+64106867 Msa0464300:CDS
ATTGTTGGTGGTGCTATTAA+TGG 0.274425 3_3:+64105670 Msa0464300:CDS
GCTGCCTTCCTTAAAATATC+TGG 0.289328 3_3:-64105487 None:intergenic
CTCTTCCATTCTGTGGGCTT+GGG 0.292972 3_3:+64106499 Msa0464300:CDS
CCTCTTCCATTCTGTGGGCT+TGG 0.298443 3_3:+64106498 Msa0464300:CDS
CCAGATGCTGCCATCAATAT+TGG 0.323176 3_3:+64105219 Msa0464300:CDS
CGAAGAATCTTGTTCATAAC+CGG 0.330741 3_3:+64106613 Msa0464300:CDS
CGAAGAAACGTCATCATAAT+AGG 0.339968 3_3:+64105634 Msa0464300:CDS
ATGTTATGTCACTTTAAGTT+TGG 0.344402 3_3:+64107023 Msa0464300:CDS
TATGGGGAAAACATTGGTTT+TGG 0.349042 3_3:+64107147 Msa0464300:CDS
ACATGCATCGTTGCTGCTTC+CGG 0.358767 3_3:+64105270 Msa0464300:CDS
CTATTATGTTTATACTCTGC+TGG 0.362807 3_3:+64106861 Msa0464300:CDS
CATTATGATGTTTGTCTGCT+TGG 0.369746 3_3:+64106639 Msa0464300:CDS
TATCTTGCCACCAATATTGA+TGG 0.389773 3_3:-64105229 None:intergenic
TTAATTTCTGCCATTGTACT+TGG 0.400667 3_3:+64106535 Msa0464300:CDS
GCAGTGGTGTCTGGTGTTGA+TGG 0.402312 3_3:+64106795 Msa0464300:CDS
CTTCTTGTTCTATGCTGGTT+GGG 0.406015 3_3:+64107049 Msa0464300:CDS
CCTTCTTGTTCTATGCTGGT+TGG 0.407272 3_3:+64107048 Msa0464300:CDS
GGAGCCTTCTTGTTCTATGC+TGG 0.408479 3_3:+64107044 Msa0464300:CDS
AAAGCCTTACGCAAAATTAG+AGG 0.410530 3_3:+64106286 Msa0464300:CDS
CCACGTTCGACTAAGCTGTT+GGG 0.414673 3_3:-64106244 None:intergenic
TGGATTCAATGTACACCATA+TGG 0.418769 3_3:+64107129 Msa0464300:CDS
ACGTCTTCTCTTTATCTAGC+TGG 0.428341 3_3:+64105565 Msa0464300:CDS
CCAATATTGATGGCAGCATC+TGG 0.432816 3_3:-64105219 None:intergenic
GGTGGTGCCCTCTTTATTGT+TGG 0.444551 3_3:+64105655 Msa0464300:CDS
TGTTGATCCCGGTAAGTTGT+TGG 0.450297 3_3:-64106453 None:intergenic
ACCACGTTCGACTAAGCTGT+TGG 0.458442 3_3:-64106245 None:intergenic
ACCTAACCTCTTCCATTCTG+TGG 0.461623 3_3:+64106492 Msa0464300:CDS
AAGGGAATTCCTTTAGTCTC+AGG 0.463134 3_3:-64107107 None:intergenic
GGAGTTGGTGTAGTCGCTGC+AGG 0.467474 3_3:+64106109 Msa0464300:CDS
CCTAACCTCTTCCATTCTGT+GGG 0.469888 3_3:+64106493 Msa0464300:CDS
CAACAAAACCGGCAGAGATA+AGG 0.471435 3_3:-64106579 None:intergenic
GTGTCTAACCTTATCTCTGC+CGG 0.472009 3_3:+64106571 Msa0464300:CDS
CCCACAGAATGGAAGAGGTT+AGG 0.476541 3_3:-64106493 None:intergenic
GGATTCAATGTACACCATAT+GGG 0.477310 3_3:+64107130 Msa0464300:CDS
GGTCGTGGGGCCCTCTAACA+TGG 0.478479 3_3:+64106892 Msa0464300:CDS
CTGTGGTTCTTATATTTACA+GGG 0.480105 3_3:-64106935 None:intergenic
TACTAATATTGCATTCCCCT+TGG 0.480612 3_3:-64106832 None:intergenic
ATTGTGCTAGCAGTGGTGTC+TGG 0.481749 3_3:+64106786 Msa0464300:CDS
GAAAGCGACGATGTTGATCC+CGG 0.488081 3_3:-64106464 None:intergenic
CCTGCAGTTGTAATGACAAT+TGG 0.493710 3_3:+64106199 Msa0464300:CDS
ACCAAATCGATCAACAAAAC+CGG 0.494702 3_3:-64106590 None:intergenic
CTTGGAATAAGCCATGTTAG+AGG 0.494856 3_3:-64106903 None:intergenic
GGTGCCCTCTTTATTGTTGG+TGG 0.497074 3_3:+64105658 Msa0464300:CDS
TGGGGATGGAGACTCTCTCT+TGG 0.498033 3_3:+64106163 Msa0464300:CDS
CGATTTGTTAAAGGAGAAGA+TGG 0.500703 3_3:+64107173 Msa0464300:CDS
TCTCCATCCCCATGTGTGCT+TGG 0.503665 3_3:-64106152 None:intergenic
AATAGCTATGCTTTGTCCTG+TGG 0.505069 3_3:-64106952 None:intergenic
AGCAAAGTCACCGCGTGGTA+TGG 0.506861 3_3:+64105610 Msa0464300:CDS
TTAATAAGTTCTTCTAACTC+AGG 0.509188 3_3:-64106328 None:intergenic
CCATCCCCATGTGTGCTTGG+CGG 0.515790 3_3:-64106149 None:intergenic
TGAGACTAAAGGAATTCCCT+TGG 0.516494 3_3:+64107109 Msa0464300:CDS
GGGGAATGCAATATTAGTAT+TGG 0.522711 3_3:+64106836 Msa0464300:CDS
ACGGCACCGCCAAGCACACA+TGG 0.525868 3_3:+64106143 Msa0464300:CDS
AATTGGTTCCTTCCTCATAA+CGG 0.526052 3_3:+64106216 Msa0464300:CDS
TATGGTGTACATTGAATCCA+AGG 0.528540 3_3:-64107126 None:intergenic
CGGTGACTTTGCTAGCTGCA+AGG 0.530108 3_3:-64105600 None:intergenic
CCAATTGTCATTACAACTGC+AGG 0.530129 3_3:-64106199 None:intergenic
TGGTGCTATTAATGGTGGTT+CGG 0.531917 3_3:+64105678 Msa0464300:CDS
CACGTTCGACTAAGCTGTTG+GGG 0.538498 3_3:-64106243 None:intergenic
AAGAGAGTATCGACCTCACT+TGG 0.538643 3_3:+64106405 Msa0464300:CDS
TAACTCAGGTTCAATATCTA+CGG 0.538681 3_3:-64106314 None:intergenic
CCGCCAAGCACACATGGGGA+TGG 0.549134 3_3:+64106149 Msa0464300:CDS
CCAAGCCCACAGAATGGAAG+AGG 0.560247 3_3:-64106498 None:intergenic
TAGCACCACCAACAATAAAG+AGG 0.563652 3_3:-64105663 None:intergenic
GGTGACTTTGCTAGCTGCAA+GGG 0.565981 3_3:-64105599 None:intergenic
TTTACAGGGAAAATCTCACT+TGG 0.566699 3_3:-64106921 None:intergenic
TCTGTGGGCTTGGGACATGA+TGG 0.566874 3_3:+64106508 Msa0464300:CDS
CATGTCCCAAGCCCACAGAA+TGG 0.569588 3_3:-64106504 None:intergenic
AACACGACCCAAAATGAGCA+TGG 0.570691 3_3:-64105710 None:intergenic
GTTGGTGGTGCTATTAATGG+TGG 0.572136 3_3:+64105673 Msa0464300:CDS
ACACCATATGGGGAAAACAT+TGG 0.572553 3_3:+64107141 Msa0464300:CDS
CCTGTAAATATAAGAACCAC+AGG 0.573263 3_3:+64106936 Msa0464300:CDS
GGCTGGTGGGGTATTTGCTG+TGG 0.574846 3_3:+64105188 Msa0464300:CDS
GATGCTGCCATCAATATTGG+TGG 0.590546 3_3:+64105222 Msa0464300:CDS
TTGGAATAAGCCATGTTAGA+GGG 0.596308 3_3:-64106902 None:intergenic
GAAGAATCTTGTTCATAACC+GGG 0.599176 3_3:+64106614 Msa0464300:CDS
GACAAACATCATAATGCCCC+CGG 0.601203 3_3:-64106632 None:intergenic
TGCATCGTTGCTGCTTCCGG+TGG 0.604561 3_3:+64105273 Msa0464300:CDS
AGCACCACCAACAATAAAGA+GGG 0.605228 3_3:-64105662 None:intergenic
TGGTACAAATGACATATCCA+AGG 0.605738 3_3:+64106815 Msa0464300:CDS
CGGCACCGCCAAGCACACAT+GGG 0.606397 3_3:+64106144 Msa0464300:CDS
GTATCGACCTCACTTGGTGA+TGG 0.608237 3_3:+64106411 Msa0464300:CDS
GATTCAATGTACACCATATG+GGG 0.610171 3_3:+64107131 Msa0464300:CDS
GCGAATGCCATCACCAAGTG+AGG 0.611968 3_3:-64106418 None:intergenic
CAGAGATAAGGTTAGACACA+AGG 0.612076 3_3:-64106567 None:intergenic
GCAATTTCAGATAGATACAA+TGG 0.614599 3_3:-64106037 None:intergenic
AAGGTTAGACACAAGGCTAA+CGG 0.616354 3_3:-64106560 None:intergenic
ACACGACCCAAAATGAGCAT+GGG 0.620677 3_3:-64105709 None:intergenic
GGTACAAATGACATATCCAA+GGG 0.626581 3_3:+64106816 Msa0464300:CDS
CCAACCAGCATAGAACAAGA+AGG 0.632155 3_3:-64107048 None:intergenic
TTCAGGAGGTGTTACAACGA+TGG 0.634531 3_3:+64105441 Msa0464300:intron
AAGAATCTTGTTCATAACCG+GGG 0.636667 3_3:+64106615 Msa0464300:CDS
GGCACCGCCAAGCACACATG+GGG 0.639282 3_3:+64106145 Msa0464300:CDS
CCCAACAGCTTAGTCGAACG+TGG 0.654800 3_3:+64106244 Msa0464300:CDS
AGAATCTTGTTCATAACCGG+GGG 0.669322 3_3:+64106616 Msa0464300:CDS
CTCAGGTTCAATATCTACGG+AGG 0.669894 3_3:-64106311 None:intergenic
TTCAGATAGATACAATGGTG+CGG 0.672267 3_3:-64106032 None:intergenic
AGAAACGTCATCATAATAGG+TGG 0.673000 3_3:+64105637 Msa0464300:CDS
GCTGCAGGCTGCATAAACTA+CGG 0.674975 3_3:+64106124 Msa0464300:CDS
TGTGTCCATTGTGCTAGCAG+TGG 0.678099 3_3:+64106779 Msa0464300:CDS
AGACACCACTGCTAGCACAA+TGG 0.679999 3_3:-64106784 None:intergenic
ATGGTGTACATTGAATCCAA+GGG 0.688425 3_3:-64107125 None:intergenic
GCTAACGGATCCAAGTACAA+TGG 0.704332 3_3:-64106545 None:intergenic
CAGCTAGCAAAGTCACCGCG+TGG 0.728015 3_3:+64105605 Msa0464300:CDS
ACGTTCGACTAAGCTGTTGG+GGG 0.743564 3_3:-64106242 None:intergenic
GTACAAATGACATATCCAAG+GGG 0.751900 3_3:+64106817 Msa0464300:CDS
GTTTCTTCGACCATACCACG+CGG 0.876756 3_3:-64105620 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGTAATTCAAATATAATA+AGG - chr3_3:64105360-64105379 None:intergenic 10.0%
!!! TAAATAATTAGTTCTTAATT+TGG + chr3_3:64105792-64105811 Msa0464300:intron 10.0%
!!! AACAATTATTTTATGTAAAA+AGG + chr3_3:64105874-64105893 Msa0464300:intron 10.0%
!! AATTTAATAAATAGATAGTT+AGG - chr3_3:64106680-64106699 None:intergenic 10.0%
!! AATGTAATTCAAATATAATA+AGG - chr3_3:64105360-64105379 None:intergenic 10.0%
!!! TAAATAATTAGTTCTTAATT+TGG + chr3_3:64105792-64105811 Msa0464300:intron 10.0%
!!! AACAATTATTTTATGTAAAA+AGG + chr3_3:64105874-64105893 Msa0464300:intron 10.0%
!! AATTTAATAAATAGATAGTT+AGG - chr3_3:64106680-64106699 None:intergenic 10.0%
!!! TTAATTATTATTTTACCAAC+AGG + chr3_3:64106009-64106028 Msa0464300:intron 15.0%
!!! CTTTTTAATATGGTTTTAAA+GGG - chr3_3:64106388-64106407 None:intergenic 15.0%
!!! TCTTTTTAATATGGTTTTAA+AGG - chr3_3:64106389-64106408 None:intergenic 15.0%
!!! TTAATTATTATTTTACCAAC+AGG + chr3_3:64106009-64106028 Msa0464300:intron 15.0%
!!! CTTTTTAATATGGTTTTAAA+GGG - chr3_3:64106388-64106407 None:intergenic 15.0%
!!! TCTTTTTAATATGGTTTTAA+AGG - chr3_3:64106389-64106408 None:intergenic 15.0%
!!! AATTCTTTCCAGATATTTTA+AGG + chr3_3:64105479-64105498 Msa0464300:CDS 20.0%
!! TACAACATTAATGATTGTTT+AGG - chr3_3:64105825-64105844 None:intergenic 20.0%
!!! TTTTATGTAAAAAGGAATAG+AGG + chr3_3:64105882-64105901 Msa0464300:intron 20.0%
!!! AAAGGAGTCTTTAAAAAAAA+AGG - chr3_3:64105973-64105992 None:intergenic 20.0%
!! AATGCAGTTGAAAATTTAAA+AGG - chr3_3:64105991-64106010 None:intergenic 20.0%
!! ACACAAACAATTTAATTAGT+AGG - chr3_3:64106741-64106760 None:intergenic 20.0%
!!! AATTCTTTCCAGATATTTTA+AGG + chr3_3:64105479-64105498 Msa0464300:CDS 20.0%
!! TACAACATTAATGATTGTTT+AGG - chr3_3:64105825-64105844 None:intergenic 20.0%
!!! TTTTATGTAAAAAGGAATAG+AGG + chr3_3:64105882-64105901 Msa0464300:intron 20.0%
!!! AAAGGAGTCTTTAAAAAAAA+AGG - chr3_3:64105973-64105992 None:intergenic 20.0%
!! AATGCAGTTGAAAATTTAAA+AGG - chr3_3:64105991-64106010 None:intergenic 20.0%
!! ACACAAACAATTTAATTAGT+AGG - chr3_3:64106741-64106760 None:intergenic 20.0%
!!! GGAAAGAATTTTTGAAGAAA+GGG - chr3_3:64105469-64105488 None:intergenic 25.0%
!!! TGGAAAGAATTTTTGAAGAA+AGG - chr3_3:64105470-64105489 None:intergenic 25.0%
! TTAATAAGTTCTTCTAACTC+AGG - chr3_3:64106331-64106350 None:intergenic 25.0%
!! TCGATACTCTCTTTTTAATA+TGG - chr3_3:64106398-64106417 None:intergenic 25.0%
!!! ATGTTATGTCACTTTAAGTT+TGG + chr3_3:64107023-64107042 Msa0464300:CDS 25.0%
!!! GGAAAGAATTTTTGAAGAAA+GGG - chr3_3:64105469-64105488 None:intergenic 25.0%
!!! TGGAAAGAATTTTTGAAGAA+AGG - chr3_3:64105470-64105489 None:intergenic 25.0%
! TTAATAAGTTCTTCTAACTC+AGG - chr3_3:64106331-64106350 None:intergenic 25.0%
!! TCGATACTCTCTTTTTAATA+TGG - chr3_3:64106398-64106417 None:intergenic 25.0%
!!! ATGTTATGTCACTTTAAGTT+TGG + chr3_3:64107023-64107042 Msa0464300:CDS 25.0%
! CTTCTTTTTGGATATGACAT+TGG + chr3_3:64105297-64105316 Msa0464300:CDS 30.0%
TTGTGAAAATGTCGAATTTC+AGG + chr3_3:64105424-64105443 Msa0464300:intron 30.0%
!! CTTTCCAGATATTTTAAGGA+AGG + chr3_3:64105483-64105502 Msa0464300:CDS 30.0%
! AAATATTCCCATGCTCATTT+TGG + chr3_3:64105702-64105721 Msa0464300:CDS 30.0%
! AATATTCCCATGCTCATTTT+GGG + chr3_3:64105703-64105722 Msa0464300:CDS 30.0%
!!! AGTCGCAAAACACTTTTTTT+TGG + chr3_3:64105769-64105788 Msa0464300:intron 30.0%
AACTCAAGACAATTATAGTG+AGG - chr3_3:64105945-64105964 None:intergenic 30.0%
GCAATTTCAGATAGATACAA+TGG - chr3_3:64106040-64106059 None:intergenic 30.0%
!! TTTCAATTCTTTTTGGGAGT+TGG + chr3_3:64106094-64106113 Msa0464300:CDS 30.0%
TAACTCAGGTTCAATATCTA+CGG - chr3_3:64106317-64106336 None:intergenic 30.0%
TTAATTTCTGCCATTGTACT+TGG + chr3_3:64106535-64106554 Msa0464300:CDS 30.0%
CTATTATGTTTATACTCTGC+TGG + chr3_3:64106861-64106880 Msa0464300:CDS 30.0%
CTGTGGTTCTTATATTTACA+GGG - chr3_3:64106938-64106957 None:intergenic 30.0%
!!! TTTTGGTGTCGATTTGTTAA+AGG + chr3_3:64107164-64107183 Msa0464300:CDS 30.0%
! CTTCTTTTTGGATATGACAT+TGG + chr3_3:64105297-64105316 Msa0464300:CDS 30.0%
TTGTGAAAATGTCGAATTTC+AGG + chr3_3:64105424-64105443 Msa0464300:intron 30.0%
!! CTTTCCAGATATTTTAAGGA+AGG + chr3_3:64105483-64105502 Msa0464300:CDS 30.0%
! AAATATTCCCATGCTCATTT+TGG + chr3_3:64105702-64105721 Msa0464300:CDS 30.0%
! AATATTCCCATGCTCATTTT+GGG + chr3_3:64105703-64105722 Msa0464300:CDS 30.0%
!!! AGTCGCAAAACACTTTTTTT+TGG + chr3_3:64105769-64105788 Msa0464300:intron 30.0%
AACTCAAGACAATTATAGTG+AGG - chr3_3:64105945-64105964 None:intergenic 30.0%
GCAATTTCAGATAGATACAA+TGG - chr3_3:64106040-64106059 None:intergenic 30.0%
!! TTTCAATTCTTTTTGGGAGT+TGG + chr3_3:64106094-64106113 Msa0464300:CDS 30.0%
TAACTCAGGTTCAATATCTA+CGG - chr3_3:64106317-64106336 None:intergenic 30.0%
TTAATTTCTGCCATTGTACT+TGG + chr3_3:64106535-64106554 Msa0464300:CDS 30.0%
CTATTATGTTTATACTCTGC+TGG + chr3_3:64106861-64106880 Msa0464300:CDS 30.0%
CTGTGGTTCTTATATTTACA+GGG - chr3_3:64106938-64106957 None:intergenic 30.0%
!!! TTTTGGTGTCGATTTGTTAA+AGG + chr3_3:64107164-64107183 Msa0464300:CDS 30.0%
TATCTTGCCACCAATATTGA+TGG - chr3_3:64105232-64105251 None:intergenic 35.0%
ATATCCAAAAAGAAGACCAC+CGG - chr3_3:64105292-64105311 None:intergenic 35.0%
GGATATGACATTGGAATTTC+AGG + chr3_3:64105306-64105325 Msa0464300:CDS 35.0%
TGAAAATGTCGAATTTCAGG+AGG + chr3_3:64105427-64105446 Msa0464300:intron 35.0%
CGAAGAAACGTCATCATAAT+AGG + chr3_3:64105634-64105653 Msa0464300:CDS 35.0%
AGAAACGTCATCATAATAGG+TGG + chr3_3:64105637-64105656 Msa0464300:CDS 35.0%
!! ATTGTTGGTGGTGCTATTAA+TGG + chr3_3:64105670-64105689 Msa0464300:CDS 35.0%
!! ATTTTGGGTCGTGTTTTTCT+TGG + chr3_3:64105718-64105737 Msa0464300:CDS 35.0%
!! TTTTGGGTCGTGTTTTTCTT+GGG + chr3_3:64105719-64105738 Msa0464300:CDS 35.0%
TAGAGGTAAAACGAACATGA+GGG - chr3_3:64105922-64105941 None:intergenic 35.0%
AGACAATTATAGTGAGGTAG+AGG - chr3_3:64105939-64105958 None:intergenic 35.0%
TTCAGATAGATACAATGGTG+CGG - chr3_3:64106035-64106054 None:intergenic 35.0%
!!! TACCGGCTTTCAATTCTTTT+TGG + chr3_3:64106087-64106106 Msa0464300:CDS 35.0%
!! ACCGGCTTTCAATTCTTTTT+GGG + chr3_3:64106088-64106107 Msa0464300:CDS 35.0%
TCCCAAAAAGAATTGAAAGC+CGG - chr3_3:64106092-64106111 None:intergenic 35.0%
! AATTGGTTCCTTCCTCATAA+CGG + chr3_3:64106216-64106235 Msa0464300:CDS 35.0%
AAAGCCTTACGCAAAATTAG+AGG + chr3_3:64106286-64106305 Msa0464300:CDS 35.0%
ACCAAATCGATCAACAAAAC+CGG - chr3_3:64106593-64106612 None:intergenic 35.0%
CGAAGAATCTTGTTCATAAC+CGG + chr3_3:64106613-64106632 Msa0464300:CDS 35.0%
GAAGAATCTTGTTCATAACC+GGG + chr3_3:64106614-64106633 Msa0464300:CDS 35.0%
AAGAATCTTGTTCATAACCG+GGG + chr3_3:64106615-64106634 Msa0464300:CDS 35.0%
CATTATGATGTTTGTCTGCT+TGG + chr3_3:64106639-64106658 Msa0464300:CDS 35.0%
TGGTACAAATGACATATCCA+AGG + chr3_3:64106815-64106834 Msa0464300:CDS 35.0%
GGTACAAATGACATATCCAA+GGG + chr3_3:64106816-64106835 Msa0464300:CDS 35.0%
GTACAAATGACATATCCAAG+GGG + chr3_3:64106817-64106836 Msa0464300:CDS 35.0%
TACTAATATTGCATTCCCCT+TGG - chr3_3:64106835-64106854 None:intergenic 35.0%
GGGGAATGCAATATTAGTAT+TGG + chr3_3:64106836-64106855 Msa0464300:CDS 35.0%
!!! TGTTTATACTCTGCTGGTTT+TGG + chr3_3:64106867-64106886 Msa0464300:CDS 35.0%
TTGGAATAAGCCATGTTAGA+GGG - chr3_3:64106905-64106924 None:intergenic 35.0%
TTTACAGGGAAAATCTCACT+TGG - chr3_3:64106924-64106943 None:intergenic 35.0%
CCTGTGGTTCTTATATTTAC+AGG - chr3_3:64106939-64106958 None:intergenic 35.0%
CCTGTAAATATAAGAACCAC+AGG + chr3_3:64106936-64106955 Msa0464300:CDS 35.0%
! TTTTTCTTGCCTGAGACTAA+AGG + chr3_3:64107098-64107117 Msa0464300:CDS 35.0%
ATGGTGTACATTGAATCCAA+GGG - chr3_3:64107128-64107147 None:intergenic 35.0%
TATGGTGTACATTGAATCCA+AGG - chr3_3:64107129-64107148 None:intergenic 35.0%
TGGATTCAATGTACACCATA+TGG + chr3_3:64107129-64107148 Msa0464300:CDS 35.0%
GGATTCAATGTACACCATAT+GGG + chr3_3:64107130-64107149 Msa0464300:CDS 35.0%
GATTCAATGTACACCATATG+GGG + chr3_3:64107131-64107150 Msa0464300:CDS 35.0%
! AAACCAATGTTTTCCCCATA+TGG - chr3_3:64107147-64107166 None:intergenic 35.0%
!!! TATGGGGAAAACATTGGTTT+TGG + chr3_3:64107147-64107166 Msa0464300:CDS 35.0%
!! CGATTTGTTAAAGGAGAAGA+TGG + chr3_3:64107173-64107192 Msa0464300:CDS 35.0%
TATCTTGCCACCAATATTGA+TGG - chr3_3:64105232-64105251 None:intergenic 35.0%
ATATCCAAAAAGAAGACCAC+CGG - chr3_3:64105292-64105311 None:intergenic 35.0%
GGATATGACATTGGAATTTC+AGG + chr3_3:64105306-64105325 Msa0464300:CDS 35.0%
TGAAAATGTCGAATTTCAGG+AGG + chr3_3:64105427-64105446 Msa0464300:intron 35.0%
CGAAGAAACGTCATCATAAT+AGG + chr3_3:64105634-64105653 Msa0464300:CDS 35.0%
AGAAACGTCATCATAATAGG+TGG + chr3_3:64105637-64105656 Msa0464300:CDS 35.0%
!! ATTGTTGGTGGTGCTATTAA+TGG + chr3_3:64105670-64105689 Msa0464300:CDS 35.0%
!! ATTTTGGGTCGTGTTTTTCT+TGG + chr3_3:64105718-64105737 Msa0464300:CDS 35.0%
!! TTTTGGGTCGTGTTTTTCTT+GGG + chr3_3:64105719-64105738 Msa0464300:CDS 35.0%
TAGAGGTAAAACGAACATGA+GGG - chr3_3:64105922-64105941 None:intergenic 35.0%
AGACAATTATAGTGAGGTAG+AGG - chr3_3:64105939-64105958 None:intergenic 35.0%
TTCAGATAGATACAATGGTG+CGG - chr3_3:64106035-64106054 None:intergenic 35.0%
!!! TACCGGCTTTCAATTCTTTT+TGG + chr3_3:64106087-64106106 Msa0464300:CDS 35.0%
!! ACCGGCTTTCAATTCTTTTT+GGG + chr3_3:64106088-64106107 Msa0464300:CDS 35.0%
TCCCAAAAAGAATTGAAAGC+CGG - chr3_3:64106092-64106111 None:intergenic 35.0%
! AATTGGTTCCTTCCTCATAA+CGG + chr3_3:64106216-64106235 Msa0464300:CDS 35.0%
AAAGCCTTACGCAAAATTAG+AGG + chr3_3:64106286-64106305 Msa0464300:CDS 35.0%
ACCAAATCGATCAACAAAAC+CGG - chr3_3:64106593-64106612 None:intergenic 35.0%
CGAAGAATCTTGTTCATAAC+CGG + chr3_3:64106613-64106632 Msa0464300:CDS 35.0%
GAAGAATCTTGTTCATAACC+GGG + chr3_3:64106614-64106633 Msa0464300:CDS 35.0%
AAGAATCTTGTTCATAACCG+GGG + chr3_3:64106615-64106634 Msa0464300:CDS 35.0%
CATTATGATGTTTGTCTGCT+TGG + chr3_3:64106639-64106658 Msa0464300:CDS 35.0%
TGGTACAAATGACATATCCA+AGG + chr3_3:64106815-64106834 Msa0464300:CDS 35.0%
GGTACAAATGACATATCCAA+GGG + chr3_3:64106816-64106835 Msa0464300:CDS 35.0%
GTACAAATGACATATCCAAG+GGG + chr3_3:64106817-64106836 Msa0464300:CDS 35.0%
TACTAATATTGCATTCCCCT+TGG - chr3_3:64106835-64106854 None:intergenic 35.0%
GGGGAATGCAATATTAGTAT+TGG + chr3_3:64106836-64106855 Msa0464300:CDS 35.0%
!!! TGTTTATACTCTGCTGGTTT+TGG + chr3_3:64106867-64106886 Msa0464300:CDS 35.0%
TTGGAATAAGCCATGTTAGA+GGG - chr3_3:64106905-64106924 None:intergenic 35.0%
TTTACAGGGAAAATCTCACT+TGG - chr3_3:64106924-64106943 None:intergenic 35.0%
CCTGTGGTTCTTATATTTAC+AGG - chr3_3:64106939-64106958 None:intergenic 35.0%
CCTGTAAATATAAGAACCAC+AGG + chr3_3:64106936-64106955 Msa0464300:CDS 35.0%
! TTTTTCTTGCCTGAGACTAA+AGG + chr3_3:64107098-64107117 Msa0464300:CDS 35.0%
ATGGTGTACATTGAATCCAA+GGG - chr3_3:64107128-64107147 None:intergenic 35.0%
TATGGTGTACATTGAATCCA+AGG - chr3_3:64107129-64107148 None:intergenic 35.0%
TGGATTCAATGTACACCATA+TGG + chr3_3:64107129-64107148 Msa0464300:CDS 35.0%
GGATTCAATGTACACCATAT+GGG + chr3_3:64107130-64107149 Msa0464300:CDS 35.0%
GATTCAATGTACACCATATG+GGG + chr3_3:64107131-64107150 Msa0464300:CDS 35.0%
! AAACCAATGTTTTCCCCATA+TGG - chr3_3:64107147-64107166 None:intergenic 35.0%
!!! TATGGGGAAAACATTGGTTT+TGG + chr3_3:64107147-64107166 Msa0464300:CDS 35.0%
!! CGATTTGTTAAAGGAGAAGA+TGG + chr3_3:64107173-64107192 Msa0464300:CDS 35.0%
GCTGCCTTCCTTAAAATATC+TGG - chr3_3:64105490-64105509 None:intergenic 40.0%
!! GATATTTTAAGGAAGGCAGC+TGG + chr3_3:64105490-64105509 Msa0464300:CDS 40.0%
ACGTCTTCTCTTTATCTAGC+TGG + chr3_3:64105565-64105584 Msa0464300:CDS 40.0%
AGCACCACCAACAATAAAGA+GGG - chr3_3:64105665-64105684 None:intergenic 40.0%
TAGCACCACCAACAATAAAG+AGG - chr3_3:64105666-64105685 None:intergenic 40.0%
!! TGGTGCTATTAATGGTGGTT+CGG + chr3_3:64105678-64105697 Msa0464300:CDS 40.0%
! GTCGTGTTTTTCTTGGGTTT+GGG + chr3_3:64105725-64105744 Msa0464300:CDS 40.0%
! TCGTGTTTTTCTTGGGTTTG+GGG + chr3_3:64105726-64105745 Msa0464300:CDS 40.0%
AGAGGTAAAACGAACATGAG+GGG - chr3_3:64105921-64105940 None:intergenic 40.0%
GTAGAGGTAAAACGAACATG+AGG - chr3_3:64105923-64105942 None:intergenic 40.0%
CCAATTGTCATTACAACTGC+AGG - chr3_3:64106202-64106221 None:intergenic 40.0%
CCTGCAGTTGTAATGACAAT+TGG + chr3_3:64106199-64106218 Msa0464300:CDS 40.0%
! GGATCCTCTAATTTTGCGTA+AGG - chr3_3:64106293-64106312 None:intergenic 40.0%
CGGTAAGTTGTTGGAAAAAC+GGG - chr3_3:64106447-64106466 None:intergenic 40.0%
CCGGTAAGTTGTTGGAAAAA+CGG - chr3_3:64106448-64106467 None:intergenic 40.0%
!! CCGTTTTTCCAACAACTTAC+CGG + chr3_3:64106445-64106464 Msa0464300:CDS 40.0%
! CGTTTTTCCAACAACTTACC+GGG + chr3_3:64106446-64106465 Msa0464300:CDS 40.0%
AAGGTTAGACACAAGGCTAA+CGG - chr3_3:64106563-64106582 None:intergenic 40.0%
CAGAGATAAGGTTAGACACA+AGG - chr3_3:64106570-64106589 None:intergenic 40.0%
AGAATCTTGTTCATAACCGG+GGG + chr3_3:64106616-64106635 Msa0464300:CDS 40.0%
!!! TATACTCTGCTGGTTTTGGT+TGG + chr3_3:64106871-64106890 Msa0464300:CDS 40.0%
CTTGGAATAAGCCATGTTAG+AGG - chr3_3:64106906-64106925 None:intergenic 40.0%
AATAGCTATGCTTTGTCCTG+TGG - chr3_3:64106955-64106974 None:intergenic 40.0%
! CTTCTTGTTCTATGCTGGTT+GGG + chr3_3:64107049-64107068 Msa0464300:CDS 40.0%
AAGGGAATTCCTTTAGTCTC+AGG - chr3_3:64107110-64107129 None:intergenic 40.0%
TGAGACTAAAGGAATTCCCT+TGG + chr3_3:64107109-64107128 Msa0464300:CDS 40.0%
ACACCATATGGGGAAAACAT+TGG + chr3_3:64107141-64107160 Msa0464300:CDS 40.0%
GCTGCCTTCCTTAAAATATC+TGG - chr3_3:64105490-64105509 None:intergenic 40.0%
!! GATATTTTAAGGAAGGCAGC+TGG + chr3_3:64105490-64105509 Msa0464300:CDS 40.0%
ACGTCTTCTCTTTATCTAGC+TGG + chr3_3:64105565-64105584 Msa0464300:CDS 40.0%
AGCACCACCAACAATAAAGA+GGG - chr3_3:64105665-64105684 None:intergenic 40.0%
TAGCACCACCAACAATAAAG+AGG - chr3_3:64105666-64105685 None:intergenic 40.0%
!! TGGTGCTATTAATGGTGGTT+CGG + chr3_3:64105678-64105697 Msa0464300:CDS 40.0%
! GTCGTGTTTTTCTTGGGTTT+GGG + chr3_3:64105725-64105744 Msa0464300:CDS 40.0%
! TCGTGTTTTTCTTGGGTTTG+GGG + chr3_3:64105726-64105745 Msa0464300:CDS 40.0%
AGAGGTAAAACGAACATGAG+GGG - chr3_3:64105921-64105940 None:intergenic 40.0%
GTAGAGGTAAAACGAACATG+AGG - chr3_3:64105923-64105942 None:intergenic 40.0%
CCAATTGTCATTACAACTGC+AGG - chr3_3:64106202-64106221 None:intergenic 40.0%
CCTGCAGTTGTAATGACAAT+TGG + chr3_3:64106199-64106218 Msa0464300:CDS 40.0%
! GGATCCTCTAATTTTGCGTA+AGG - chr3_3:64106293-64106312 None:intergenic 40.0%
CGGTAAGTTGTTGGAAAAAC+GGG - chr3_3:64106447-64106466 None:intergenic 40.0%
CCGGTAAGTTGTTGGAAAAA+CGG - chr3_3:64106448-64106467 None:intergenic 40.0%
!! CCGTTTTTCCAACAACTTAC+CGG + chr3_3:64106445-64106464 Msa0464300:CDS 40.0%
! CGTTTTTCCAACAACTTACC+GGG + chr3_3:64106446-64106465 Msa0464300:CDS 40.0%
AAGGTTAGACACAAGGCTAA+CGG - chr3_3:64106563-64106582 None:intergenic 40.0%
CAGAGATAAGGTTAGACACA+AGG - chr3_3:64106570-64106589 None:intergenic 40.0%
AGAATCTTGTTCATAACCGG+GGG + chr3_3:64106616-64106635 Msa0464300:CDS 40.0%
!!! TATACTCTGCTGGTTTTGGT+TGG + chr3_3:64106871-64106890 Msa0464300:CDS 40.0%
CTTGGAATAAGCCATGTTAG+AGG - chr3_3:64106906-64106925 None:intergenic 40.0%
AATAGCTATGCTTTGTCCTG+TGG - chr3_3:64106955-64106974 None:intergenic 40.0%
! CTTCTTGTTCTATGCTGGTT+GGG + chr3_3:64107049-64107068 Msa0464300:CDS 40.0%
AAGGGAATTCCTTTAGTCTC+AGG - chr3_3:64107110-64107129 None:intergenic 40.0%
TGAGACTAAAGGAATTCCCT+TGG + chr3_3:64107109-64107128 Msa0464300:CDS 40.0%
ACACCATATGGGGAAAACAT+TGG + chr3_3:64107141-64107160 Msa0464300:CDS 40.0%
! CCAATATTGATGGCAGCATC+TGG - chr3_3:64105222-64105241 None:intergenic 45.0%
CCAGATGCTGCCATCAATAT+TGG + chr3_3:64105219-64105238 Msa0464300:CDS 45.0%
GATGCTGCCATCAATATTGG+TGG + chr3_3:64105222-64105241 Msa0464300:CDS 45.0%
!! TTCAGGAGGTGTTACAACGA+TGG + chr3_3:64105441-64105460 Msa0464300:intron 45.0%
!! GTTGGTGGTGCTATTAATGG+TGG + chr3_3:64105673-64105692 Msa0464300:CDS 45.0%
ACACGACCCAAAATGAGCAT+GGG - chr3_3:64105712-64105731 None:intergenic 45.0%
AACACGACCCAAAATGAGCA+TGG - chr3_3:64105713-64105732 None:intergenic 45.0%
! GGTCGTGTTTTTCTTGGGTT+TGG + chr3_3:64105724-64105743 Msa0464300:CDS 45.0%
!! GTTTTTCTTGGGTTTGGGGT+CGG + chr3_3:64105730-64105749 Msa0464300:CDS 45.0%
CTGAAATTGCTCCCCCAAAA+TGG + chr3_3:64106050-64106069 Msa0464300:CDS 45.0%
!!! TAAAAGCGCCTCGCCATTTT+GGG - chr3_3:64106066-64106085 None:intergenic 45.0%
!!! TTAAAAGCGCCTCGCCATTT+TGG - chr3_3:64106067-64106086 None:intergenic 45.0%
CTCAGGTTCAATATCTACGG+AGG - chr3_3:64106314-64106333 None:intergenic 45.0%
!! AAGAGAGTATCGACCTCACT+TGG + chr3_3:64106405-64106424 Msa0464300:CDS 45.0%
TGTTGATCCCGGTAAGTTGT+TGG - chr3_3:64106456-64106475 None:intergenic 45.0%
ACCTAACCTCTTCCATTCTG+TGG + chr3_3:64106492-64106511 Msa0464300:CDS 45.0%
CCTAACCTCTTCCATTCTGT+GGG + chr3_3:64106493-64106512 Msa0464300:CDS 45.0%
! GCTAACGGATCCAAGTACAA+TGG - chr3_3:64106548-64106567 None:intergenic 45.0%
GTGTCTAACCTTATCTCTGC+CGG + chr3_3:64106571-64106590 Msa0464300:CDS 45.0%
CAACAAAACCGGCAGAGATA+AGG - chr3_3:64106582-64106601 None:intergenic 45.0%
!!! GCCGGTTTTGTTGATCGATT+TGG + chr3_3:64106589-64106608 Msa0464300:CDS 45.0%
GACAAACATCATAATGCCCC+CGG - chr3_3:64106635-64106654 None:intergenic 45.0%
CCAACCAGCATAGAACAAGA+AGG - chr3_3:64107051-64107070 None:intergenic 45.0%
CCTTCTTGTTCTATGCTGGT+TGG + chr3_3:64107048-64107067 Msa0464300:CDS 45.0%
! CCAATATTGATGGCAGCATC+TGG - chr3_3:64105222-64105241 None:intergenic 45.0%
CCAGATGCTGCCATCAATAT+TGG + chr3_3:64105219-64105238 Msa0464300:CDS 45.0%
GATGCTGCCATCAATATTGG+TGG + chr3_3:64105222-64105241 Msa0464300:CDS 45.0%
!! TTCAGGAGGTGTTACAACGA+TGG + chr3_3:64105441-64105460 Msa0464300:intron 45.0%
!! GTTGGTGGTGCTATTAATGG+TGG + chr3_3:64105673-64105692 Msa0464300:CDS 45.0%
ACACGACCCAAAATGAGCAT+GGG - chr3_3:64105712-64105731 None:intergenic 45.0%
AACACGACCCAAAATGAGCA+TGG - chr3_3:64105713-64105732 None:intergenic 45.0%
! GGTCGTGTTTTTCTTGGGTT+TGG + chr3_3:64105724-64105743 Msa0464300:CDS 45.0%
!! GTTTTTCTTGGGTTTGGGGT+CGG + chr3_3:64105730-64105749 Msa0464300:CDS 45.0%
CTGAAATTGCTCCCCCAAAA+TGG + chr3_3:64106050-64106069 Msa0464300:CDS 45.0%
!!! TAAAAGCGCCTCGCCATTTT+GGG - chr3_3:64106066-64106085 None:intergenic 45.0%
!!! TTAAAAGCGCCTCGCCATTT+TGG - chr3_3:64106067-64106086 None:intergenic 45.0%
CTCAGGTTCAATATCTACGG+AGG - chr3_3:64106314-64106333 None:intergenic 45.0%
!! AAGAGAGTATCGACCTCACT+TGG + chr3_3:64106405-64106424 Msa0464300:CDS 45.0%
TGTTGATCCCGGTAAGTTGT+TGG - chr3_3:64106456-64106475 None:intergenic 45.0%
ACCTAACCTCTTCCATTCTG+TGG + chr3_3:64106492-64106511 Msa0464300:CDS 45.0%
CCTAACCTCTTCCATTCTGT+GGG + chr3_3:64106493-64106512 Msa0464300:CDS 45.0%
! GCTAACGGATCCAAGTACAA+TGG - chr3_3:64106548-64106567 None:intergenic 45.0%
GTGTCTAACCTTATCTCTGC+CGG + chr3_3:64106571-64106590 Msa0464300:CDS 45.0%
CAACAAAACCGGCAGAGATA+AGG - chr3_3:64106582-64106601 None:intergenic 45.0%
!!! GCCGGTTTTGTTGATCGATT+TGG + chr3_3:64106589-64106608 Msa0464300:CDS 45.0%
GACAAACATCATAATGCCCC+CGG - chr3_3:64106635-64106654 None:intergenic 45.0%
CCAACCAGCATAGAACAAGA+AGG - chr3_3:64107051-64107070 None:intergenic 45.0%
CCTTCTTGTTCTATGCTGGT+TGG + chr3_3:64107048-64107067 Msa0464300:CDS 45.0%
! ACATGCATCGTTGCTGCTTC+CGG + chr3_3:64105270-64105289 Msa0464300:CDS 50.0%
! GCTTCCGGTGGTCTTCTTTT+TGG + chr3_3:64105285-64105304 Msa0464300:CDS 50.0%
GGTGACTTTGCTAGCTGCAA+GGG - chr3_3:64105602-64105621 None:intergenic 50.0%
GTTTCTTCGACCATACCACG+CGG - chr3_3:64105623-64105642 None:intergenic 50.0%
GGTGGTGCCCTCTTTATTGT+TGG + chr3_3:64105655-64105674 Msa0464300:CDS 50.0%
GGTGCCCTCTTTATTGTTGG+TGG + chr3_3:64105658-64105677 Msa0464300:CDS 50.0%
!!! AAAAGCGCCTCGCCATTTTG+GGG - chr3_3:64106065-64106084 None:intergenic 50.0%
!! TGGCGAGGCGCTTTTAATAC+CGG + chr3_3:64106070-64106089 Msa0464300:CDS 50.0%
GCTGCAGGCTGCATAAACTA+CGG + chr3_3:64106124-64106143 Msa0464300:CDS 50.0%
ACGTTCGACTAAGCTGTTGG+GGG - chr3_3:64106245-64106264 None:intergenic 50.0%
CACGTTCGACTAAGCTGTTG+GGG - chr3_3:64106246-64106265 None:intergenic 50.0%
CCACGTTCGACTAAGCTGTT+GGG - chr3_3:64106247-64106266 None:intergenic 50.0%
ACCACGTTCGACTAAGCTGT+TGG - chr3_3:64106248-64106267 None:intergenic 50.0%
! GTATCGACCTCACTTGGTGA+TGG + chr3_3:64106411-64106430 Msa0464300:CDS 50.0%
GAAAGCGACGATGTTGATCC+CGG - chr3_3:64106467-64106486 None:intergenic 50.0%
CCCACAGAATGGAAGAGGTT+AGG - chr3_3:64106496-64106515 None:intergenic 50.0%
CTCTTCCATTCTGTGGGCTT+GGG + chr3_3:64106499-64106518 Msa0464300:CDS 50.0%
TGTGTCCATTGTGCTAGCAG+TGG + chr3_3:64106779-64106798 Msa0464300:CDS 50.0%
AGACACCACTGCTAGCACAA+TGG - chr3_3:64106787-64106806 None:intergenic 50.0%
ATTGTGCTAGCAGTGGTGTC+TGG + chr3_3:64106786-64106805 Msa0464300:CDS 50.0%
!!! TGCTGGTTTTGGTTGGTCGT+GGG + chr3_3:64106878-64106897 Msa0464300:CDS 50.0%
GGAGCCTTCTTGTTCTATGC+TGG + chr3_3:64107044-64107063 Msa0464300:CDS 50.0%
! ACATGCATCGTTGCTGCTTC+CGG + chr3_3:64105270-64105289 Msa0464300:CDS 50.0%
! GCTTCCGGTGGTCTTCTTTT+TGG + chr3_3:64105285-64105304 Msa0464300:CDS 50.0%
GGTGACTTTGCTAGCTGCAA+GGG - chr3_3:64105602-64105621 None:intergenic 50.0%
GTTTCTTCGACCATACCACG+CGG - chr3_3:64105623-64105642 None:intergenic 50.0%
GGTGGTGCCCTCTTTATTGT+TGG + chr3_3:64105655-64105674 Msa0464300:CDS 50.0%
GGTGCCCTCTTTATTGTTGG+TGG + chr3_3:64105658-64105677 Msa0464300:CDS 50.0%
!!! AAAAGCGCCTCGCCATTTTG+GGG - chr3_3:64106065-64106084 None:intergenic 50.0%
!! TGGCGAGGCGCTTTTAATAC+CGG + chr3_3:64106070-64106089 Msa0464300:CDS 50.0%
GCTGCAGGCTGCATAAACTA+CGG + chr3_3:64106124-64106143 Msa0464300:CDS 50.0%
ACGTTCGACTAAGCTGTTGG+GGG - chr3_3:64106245-64106264 None:intergenic 50.0%
CACGTTCGACTAAGCTGTTG+GGG - chr3_3:64106246-64106265 None:intergenic 50.0%
CCACGTTCGACTAAGCTGTT+GGG - chr3_3:64106247-64106266 None:intergenic 50.0%
ACCACGTTCGACTAAGCTGT+TGG - chr3_3:64106248-64106267 None:intergenic 50.0%
! GTATCGACCTCACTTGGTGA+TGG + chr3_3:64106411-64106430 Msa0464300:CDS 50.0%
GAAAGCGACGATGTTGATCC+CGG - chr3_3:64106467-64106486 None:intergenic 50.0%
CCCACAGAATGGAAGAGGTT+AGG - chr3_3:64106496-64106515 None:intergenic 50.0%
CTCTTCCATTCTGTGGGCTT+GGG + chr3_3:64106499-64106518 Msa0464300:CDS 50.0%
TGTGTCCATTGTGCTAGCAG+TGG + chr3_3:64106779-64106798 Msa0464300:CDS 50.0%
AGACACCACTGCTAGCACAA+TGG - chr3_3:64106787-64106806 None:intergenic 50.0%
ATTGTGCTAGCAGTGGTGTC+TGG + chr3_3:64106786-64106805 Msa0464300:CDS 50.0%
!!! TGCTGGTTTTGGTTGGTCGT+GGG + chr3_3:64106878-64106897 Msa0464300:CDS 50.0%
GGAGCCTTCTTGTTCTATGC+TGG + chr3_3:64107044-64107063 Msa0464300:CDS 50.0%
CGGTGACTTTGCTAGCTGCA+AGG - chr3_3:64105603-64105622 None:intergenic 55.0%
AGCAAAGTCACCGCGTGGTA+TGG + chr3_3:64105610-64105629 Msa0464300:CDS 55.0%
GATACAATGGTGCGGCCTGT+TGG - chr3_3:64106027-64106046 None:intergenic 55.0%
ATTGCTCCCCCAAAATGGCG+AGG + chr3_3:64106055-64106074 Msa0464300:CDS 55.0%
!! AAAGCGCCTCGCCATTTTGG+GGG - chr3_3:64106064-64106083 None:intergenic 55.0%
TCTCCATCCCCATGTGTGCT+TGG - chr3_3:64106155-64106174 None:intergenic 55.0%
TGGGGATGGAGACTCTCTCT+TGG + chr3_3:64106163-64106182 Msa0464300:CDS 55.0%
!! TGTTGGGGGTGTCCGTTATG+AGG - chr3_3:64106231-64106250 None:intergenic 55.0%
CCCAACAGCTTAGTCGAACG+TGG + chr3_3:64106244-64106263 Msa0464300:CDS 55.0%
GCGAATGCCATCACCAAGTG+AGG - chr3_3:64106421-64106440 None:intergenic 55.0%
CCAAGCCCACAGAATGGAAG+AGG - chr3_3:64106501-64106520 None:intergenic 55.0%
CCTCTTCCATTCTGTGGGCT+TGG + chr3_3:64106498-64106517 Msa0464300:CDS 55.0%
CATGTCCCAAGCCCACAGAA+TGG - chr3_3:64106507-64106526 None:intergenic 55.0%
TCTGTGGGCTTGGGACATGA+TGG + chr3_3:64106508-64106527 Msa0464300:CDS 55.0%
! GCAGTGGTGTCTGGTGTTGA+TGG + chr3_3:64106795-64106814 Msa0464300:CDS 55.0%
!!! CTGCTGGTTTTGGTTGGTCG+TGG + chr3_3:64106877-64106896 Msa0464300:CDS 55.0%
!!! GCTGGTTTTGGTTGGTCGTG+GGG + chr3_3:64106879-64106898 Msa0464300:CDS 55.0%
CGGTGACTTTGCTAGCTGCA+AGG - chr3_3:64105603-64105622 None:intergenic 55.0%
AGCAAAGTCACCGCGTGGTA+TGG + chr3_3:64105610-64105629 Msa0464300:CDS 55.0%
GATACAATGGTGCGGCCTGT+TGG - chr3_3:64106027-64106046 None:intergenic 55.0%
ATTGCTCCCCCAAAATGGCG+AGG + chr3_3:64106055-64106074 Msa0464300:CDS 55.0%
!! AAAGCGCCTCGCCATTTTGG+GGG - chr3_3:64106064-64106083 None:intergenic 55.0%
TCTCCATCCCCATGTGTGCT+TGG - chr3_3:64106155-64106174 None:intergenic 55.0%
TGGGGATGGAGACTCTCTCT+TGG + chr3_3:64106163-64106182 Msa0464300:CDS 55.0%
!! TGTTGGGGGTGTCCGTTATG+AGG - chr3_3:64106231-64106250 None:intergenic 55.0%
CCCAACAGCTTAGTCGAACG+TGG + chr3_3:64106244-64106263 Msa0464300:CDS 55.0%
GCGAATGCCATCACCAAGTG+AGG - chr3_3:64106421-64106440 None:intergenic 55.0%
CCAAGCCCACAGAATGGAAG+AGG - chr3_3:64106501-64106520 None:intergenic 55.0%
CCTCTTCCATTCTGTGGGCT+TGG + chr3_3:64106498-64106517 Msa0464300:CDS 55.0%
CATGTCCCAAGCCCACAGAA+TGG - chr3_3:64106507-64106526 None:intergenic 55.0%
TCTGTGGGCTTGGGACATGA+TGG + chr3_3:64106508-64106527 Msa0464300:CDS 55.0%
! GCAGTGGTGTCTGGTGTTGA+TGG + chr3_3:64106795-64106814 Msa0464300:CDS 55.0%
!!! CTGCTGGTTTTGGTTGGTCG+TGG + chr3_3:64106877-64106896 Msa0464300:CDS 55.0%
!!! GCTGGTTTTGGTTGGTCGTG+GGG + chr3_3:64106879-64106898 Msa0464300:CDS 55.0%
! GGCTGGTGGGGTATTTGCTG+TGG + chr3_3:64105188-64105207 Msa0464300:CDS 60.0%
! TGCATCGTTGCTGCTTCCGG+TGG + chr3_3:64105273-64105292 Msa0464300:CDS 60.0%
CAGCTAGCAAAGTCACCGCG+TGG + chr3_3:64105605-64105624 Msa0464300:CDS 60.0%
!! GGAGTTGGTGTAGTCGCTGC+AGG + chr3_3:64106109-64106128 Msa0464300:CDS 60.0%
CCATCCCCATGTGTGCTTGG+CGG - chr3_3:64106152-64106171 None:intergenic 60.0%
!! GGGGGTGTCCGTTATGAGGA+AGG - chr3_3:64106227-64106246 None:intergenic 60.0%
! GGCTGGTGGGGTATTTGCTG+TGG + chr3_3:64105188-64105207 Msa0464300:CDS 60.0%
! TGCATCGTTGCTGCTTCCGG+TGG + chr3_3:64105273-64105292 Msa0464300:CDS 60.0%
CAGCTAGCAAAGTCACCGCG+TGG + chr3_3:64105605-64105624 Msa0464300:CDS 60.0%
!! GGAGTTGGTGTAGTCGCTGC+AGG + chr3_3:64106109-64106128 Msa0464300:CDS 60.0%
CCATCCCCATGTGTGCTTGG+CGG - chr3_3:64106152-64106171 None:intergenic 60.0%
!! GGGGGTGTCCGTTATGAGGA+AGG - chr3_3:64106227-64106246 None:intergenic 60.0%
ACGGCACCGCCAAGCACACA+TGG + chr3_3:64106143-64106162 Msa0464300:CDS 65.0%
CGGCACCGCCAAGCACACAT+GGG + chr3_3:64106144-64106163 Msa0464300:CDS 65.0%
GGCACCGCCAAGCACACATG+GGG + chr3_3:64106145-64106164 Msa0464300:CDS 65.0%
CCGCCAAGCACACATGGGGA+TGG + chr3_3:64106149-64106168 Msa0464300:CDS 65.0%
GGTCGTGGGGCCCTCTAACA+TGG + chr3_3:64106892-64106911 Msa0464300:CDS 65.0%
ACGGCACCGCCAAGCACACA+TGG + chr3_3:64106143-64106162 Msa0464300:CDS 65.0%
CGGCACCGCCAAGCACACAT+GGG + chr3_3:64106144-64106163 Msa0464300:CDS 65.0%
GGCACCGCCAAGCACACATG+GGG + chr3_3:64106145-64106164 Msa0464300:CDS 65.0%
CCGCCAAGCACACATGGGGA+TGG + chr3_3:64106149-64106168 Msa0464300:CDS 65.0%
GGTCGTGGGGCCCTCTAACA+TGG + chr3_3:64106892-64106911 Msa0464300:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 64105186 64107214 64105186 ID=Msa0464300;Name=Msa0464300
chr3_3 mRNA 64105186 64107214 64105186 ID=Msa0464300-mRNA-1;Parent=Msa0464300;Name=Msa0464300-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|0|0|1|1|1|4|0|510
chr3_3 exon 64105186 64105327 64105186 ID=Msa0464300-mRNA-1:exon:14062;Parent=Msa0464300-mRNA-1
chr3_3 exon 64105446 64105765 64105446 ID=Msa0464300-mRNA-1:exon:14063;Parent=Msa0464300-mRNA-1
chr3_3 exon 64106031 64106660 64106031 ID=Msa0464300-mRNA-1:exon:14064;Parent=Msa0464300-mRNA-1
chr3_3 exon 64106774 64107214 64106774 ID=Msa0464300-mRNA-1:exon:14065;Parent=Msa0464300-mRNA-1
chr3_3 CDS 64105186 64105327 64105186 ID=Msa0464300-mRNA-1:cds;Parent=Msa0464300-mRNA-1
chr3_3 CDS 64105446 64105765 64105446 ID=Msa0464300-mRNA-1:cds;Parent=Msa0464300-mRNA-1
chr3_3 CDS 64106031 64106660 64106031 ID=Msa0464300-mRNA-1:cds;Parent=Msa0464300-mRNA-1
chr3_3 CDS 64106774 64107214 64106774 ID=Msa0464300-mRNA-1:cds;Parent=Msa0464300-mRNA-1
Gene Sequence

>Msa0464300

ATGGCTGGTGGGGTATTTGCTGTGGATAGTACACCAGATGCTGCCATCAATATTGGTGGCAAGATAACACTCTCAATCATCATTACATGCATCGTTGCTGCTTCCGGTGGTCTTCTTTTTGGATATGACATTGGAATTTCAGGAGGTGTTACAACGATGGTGCCCTTTCTTCAAAAATTCTTTCCAGATATTTTAAGGAAGGCAGCTGGTGCTGAAGTGAATATGTATTGTGTGTATGATAGTCAAACATTGACATTATTTACGTCTTCTCTTTATCTAGCTGGATTAGTGTCATCCCTTGCAGCTAGCAAAGTCACCGCGTGGTATGGTCGAAGAAACGTCATCATAATAGGTGGTGCCCTCTTTATTGTTGGTGGTGCTATTAATGGTGGTTCGGAAAATATTCCCATGCTCATTTTGGGTCGTGTTTTTCTTGGGTTTGGGGTCGGTTTCACTAATCAAGCCGCACCATTGTATCTATCTGAAATTGCTCCCCCAAAATGGCGAGGCGCTTTTAATACCGGCTTTCAATTCTTTTTGGGAGTTGGTGTAGTCGCTGCAGGCTGCATAAACTACGGCACCGCCAAGCACACATGGGGATGGAGACTCTCTCTTGGACTTGCAGTAGTGCCTGCAGTTGTAATGACAATTGGTTCCTTCCTCATAACGGACACCCCCAACAGCTTAGTCGAACGTGGTAAGATAGAGCAAGCTAAAAAAGCCTTACGCAAAATTAGAGGATCCTCCGTAGATATTGAACCTGAGTTAGAAGAACTTATTAAGTCAATAGAACTTGCAAAATCAGTGAAACAAGAGCCCTTTAAAACCATATTAAAAAGAGAGTATCGACCTCACTTGGTGATGGCATTCGCAATCCCGTTTTTCCAACAACTTACCGGGATCAACATCGTCGCTTTCTATTCACCTAACCTCTTCCATTCTGTGGGCTTGGGACATGATGGCGCTTTAATTTCTGCCATTGTACTTGGATCCGTTAGCCTTGTGTCTAACCTTATCTCTGCCGGTTTTGTTGATCGATTTGGTCGAAGAATCTTGTTCATAACCGGGGGCATTATGATGTTTGTCTGCTTGATTGCTGTGTCCATTGTGCTAGCAGTGGTGTCTGGTGTTGATGGTACAAATGACATATCCAAGGGGAATGCAATATTAGTATTGGTGCTATTATGTTTATACTCTGCTGGTTTTGGTTGGTCGTGGGGCCCTCTAACATGGCTTATTCCAAGTGAGATTTTCCCTGTAAATATAAGAACCACAGGACAAAGCATAGCTATTGCTATACAGTTCATAATAGTATTTGTGCTATCACAAACATTCTTGACAATGTTATGTCACTTTAAGTTTGGAGCCTTCTTGTTCTATGCTGGTTGGGTTGTTGTGATGACTCTTTTTATTATATTTTTCTTGCCTGAGACTAAAGGAATTCCCTTGGATTCAATGTACACCATATGGGGAAAACATTGGTTTTGGTGTCGATTTGTTAAAGGAGAAGATGGTCAAGAAAATCATCCATGA

Protein sequence

>Msa0464300

MAGGVFAVDSTPDAAINIGGKITLSIIITCIVAASGGLLFGYDIGISGGVTTMVPFLQKFFPDILRKAAGAEVNMYCVYDSQTLTLFTSSLYLAGLVSSLAASKVTAWYGRRNVIIIGGALFIVGGAINGGSENIPMLILGRVFLGFGVGFTNQAAPLYLSEIAPPKWRGAFNTGFQFFLGVGVVAAGCINYGTAKHTWGWRLSLGLAVVPAVVMTIGSFLITDTPNSLVERGKIEQAKKALRKIRGSSVDIEPELEELIKSIELAKSVKQEPFKTILKREYRPHLVMAFAIPFFQQLTGINIVAFYSPNLFHSVGLGHDGALISAIVLGSVSLVSNLISAGFVDRFGRRILFITGGIMMFVCLIAVSIVLAVVSGVDGTNDISKGNAILVLVLLCLYSAGFGWSWGPLTWLIPSEIFPVNIRTTGQSIAIAIQFIIVFVLSQTFLTMLCHFKFGAFLFYAGWVVVMTLFIIFFLPETKGIPLDSMYTIWGKHWFWCRFVKGEDGQENHP*