Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0493710 | XP_003626244.1 | 91.536 | 319 | 27 | 0 | 1 | 319 | 1 | 319 | 0.0 | 622 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0493710 | sp|I6YGS0|EPHA_MYCTU | 35.241 | 332 | 183 | 8 | 1 | 316 | 1 | 316 | 3.33e-65 | 211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0493710 | A2Q321 | 91.536 | 319 | 27 | 0 | 1 | 319 | 1 | 319 | 0.0 | 622 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0031650 | Msa0493710 | 0.825776 | 3.898612e-54 | -8.615850e-47 |
| Msa0036580 | Msa0493710 | 0.847668 | 9.996972e-60 | -8.615850e-47 |
| Msa0059880 | Msa0493710 | 0.808926 | 2.435931e-50 | -8.615850e-47 |
| Msa0072030 | Msa0493710 | 0.801472 | 8.862488e-49 | -8.615850e-47 |
| Msa0080010 | Msa0493710 | 0.800389 | 1.474685e-48 | -8.615850e-47 |
| Msa0084160 | Msa0493710 | 0.812860 | 3.427399e-51 | -8.615850e-47 |
| Msa0085710 | Msa0493710 | 0.825598 | 4.294667e-54 | -8.615850e-47 |
| Msa0093530 | Msa0493710 | 0.857870 | 1.215720e-62 | -8.615850e-47 |
| Msa0126960 | Msa0493710 | 0.856123 | 3.978884e-62 | -8.615850e-47 |
| Msa0139270 | Msa0493710 | 0.844938 | 5.543152e-59 | -8.615850e-47 |
| Msa0150910 | Msa0493710 | 0.815418 | 9.341369e-52 | -8.615850e-47 |
| Msa0160580 | Msa0493710 | 0.822806 | 1.945587e-53 | -8.615850e-47 |
| Msa0171740 | Msa0493710 | 0.824770 | 6.740293e-54 | -8.615850e-47 |
| Msa0176620 | Msa0493710 | 0.832936 | 7.113177e-56 | -8.615850e-47 |
| Msa0177550 | Msa0493710 | 0.800423 | 1.451350e-48 | -8.615850e-47 |
| Msa0199860 | Msa0493710 | 0.825628 | 4.225470e-54 | -8.615850e-47 |
| Msa0202060 | Msa0493710 | 0.804163 | 2.464532e-49 | -8.615850e-47 |
| Msa0207970 | Msa0493710 | 0.804069 | 2.578190e-49 | -8.615850e-47 |
| Msa0225910 | Msa0493710 | 0.802794 | 4.737479e-49 | -8.615850e-47 |
| Msa0234120 | Msa0493710 | 0.802748 | 4.842940e-49 | -8.615850e-47 |
| Msa0398690 | Msa0493710 | 0.821676 | 3.558153e-53 | -8.615850e-47 |
| Msa0409490 | Msa0493710 | 0.805034 | 1.621880e-49 | -8.615850e-47 |
| Msa0414480 | Msa0493710 | 0.834987 | 2.180579e-56 | -8.615850e-47 |
| Msa0418150 | Msa0493710 | 0.802404 | 5.702530e-49 | -8.615850e-47 |
| Msa0444400 | Msa0493710 | 0.820818 | 5.609897e-53 | -8.615850e-47 |
| Msa0445530 | Msa0493710 | 0.851503 | 8.507673e-61 | -8.615850e-47 |
| Msa0464300 | Msa0493710 | 0.837066 | 6.470321e-57 | -8.615850e-47 |
| Msa0464310 | Msa0493710 | 0.809370 | 1.956701e-50 | -8.615850e-47 |
| Msa0242390 | Msa0493710 | 0.853373 | 2.493895e-61 | -8.615850e-47 |
| Msa0243970 | Msa0493710 | 0.819113 | 1.376981e-52 | -8.615850e-47 |
| Msa0266640 | Msa0493710 | 0.865897 | 4.229705e-65 | -8.615850e-47 |
| Msa0266650 | Msa0493710 | 0.872519 | 2.989073e-67 | -8.615850e-47 |
| Msa0274260 | Msa0493710 | 0.805454 | 1.324847e-49 | -8.615850e-47 |
| Msa0288270 | Msa0493710 | -0.808180 | 3.515471e-50 | -8.615850e-47 |
| Msa0295520 | Msa0493710 | -0.800738 | 1.252091e-48 | -8.615850e-47 |
| Msa0318370 | Msa0493710 | 0.828886 | 7.004505e-55 | -8.615850e-47 |
| Msa0320130 | Msa0493710 | 0.810414 | 1.166770e-50 | -8.615850e-47 |
| Msa0320140 | Msa0493710 | 0.813323 | 2.712599e-51 | -8.615850e-47 |
| Msa0320150 | Msa0493710 | 0.800890 | 1.165705e-48 | -8.615850e-47 |
| Msa0336640 | Msa0493710 | 0.812515 | 4.077682e-51 | -8.615850e-47 |
| Msa0356200 | Msa0493710 | 0.833829 | 4.259449e-56 | -8.615850e-47 |
| Msa0356250 | Msa0493710 | 0.850891 | 1.265971e-60 | -8.615850e-47 |
| Msa0356320 | Msa0493710 | 0.829213 | 5.838850e-55 | -8.615850e-47 |
| Msa0356380 | Msa0493710 | 0.821474 | 3.961697e-53 | -8.615850e-47 |
| Msa0356410 | Msa0493710 | 0.830217 | 3.326487e-55 | -8.615850e-47 |
| Msa0491950 | Msa0493710 | 0.806892 | 6.598014e-50 | -8.615850e-47 |
| Msa0493710 | Msa0532670 | 0.821257 | 4.445541e-53 | -8.615850e-47 |
| Msa0493710 | Msa0532680 | 0.828167 | 1.044832e-54 | -8.615850e-47 |
| Msa0493710 | Msa0533510 | 0.862750 | 4.061357e-64 | -8.615850e-47 |
| Msa0493710 | Msa0533520 | 0.869345 | 3.320033e-66 | -8.615850e-47 |
| Msa0493710 | Msa0535570 | 0.812773 | 3.581367e-51 | -8.615850e-47 |
| Msa0493710 | Msa0538440 | 0.813498 | 2.483565e-51 | -8.615850e-47 |
| Msa0493710 | Msa0538450 | 0.809652 | 1.702390e-50 | -8.615850e-47 |
| Msa0493710 | Msa0538520 | 0.803608 | 3.214880e-49 | -8.615850e-47 |
| Msa0493710 | Msa0538530 | 0.807770 | 4.297094e-50 | -8.615850e-47 |
| Msa0493710 | Msa0548760 | 0.821902 | 3.153781e-53 | -8.615850e-47 |
| Msa0493710 | Msa0554660 | 0.820321 | 7.294475e-53 | -8.615850e-47 |
| Msa0493710 | Msa0589450 | 0.832228 | 1.065552e-55 | -8.615850e-47 |
| Msa0493710 | Msa0589720 | 0.858466 | 8.082433e-63 | -8.615850e-47 |
| Msa0493710 | Msa0589730 | 0.878852 | 2.007746e-69 | -8.615850e-47 |
| Msa0493710 | Msa0589740 | 0.825695 | 4.074522e-54 | -8.615850e-47 |
| Msa0493710 | Msa0589750 | 0.820316 | 7.314142e-53 | -8.615850e-47 |
| Msa0493710 | Msa0591490 | 0.810068 | 1.384910e-50 | -8.615850e-47 |
| Msa0493710 | Msa0594320 | 0.810899 | 9.164953e-51 | -8.615850e-47 |
| Msa0493710 | Msa0594330 | 0.841282 | 5.223543e-58 | -8.615850e-47 |
| Msa0493710 | Msa0594470 | 0.812844 | 3.454586e-51 | -8.615850e-47 |
| Msa0493710 | Msa0623750 | 0.832691 | 8.179932e-56 | -8.615850e-47 |
| Msa0493710 | Msa0629030 | 0.808081 | 3.689379e-50 | -8.615850e-47 |
| Msa0493710 | Msa0630130 | 0.840535 | 8.200638e-58 | -8.615850e-47 |
| Msa0493710 | Msa0634290 | 0.814148 | 1.785956e-51 | -8.615850e-47 |
| Msa0493710 | Msa0640290 | 0.805220 | 1.482654e-49 | -8.615850e-47 |
| Msa0493710 | Msa0645120 | 0.800767 | 1.234822e-48 | -8.615850e-47 |
| Msa0493710 | Msa0666580 | 0.806545 | 7.807592e-50 | -8.615850e-47 |
| Msa0493710 | Msa0667640 | 0.809016 | 2.329941e-50 | -8.615850e-47 |
| Msa0493710 | Msa0668210 | 0.874499 | 6.437472e-68 | -8.615850e-47 |
| Msa0493710 | Msa0668230 | 0.823127 | 1.636947e-53 | -8.615850e-47 |
| Msa0493710 | Msa0670360 | 0.802302 | 5.984819e-49 | -8.615850e-47 |
| Msa0493710 | Msa0672780 | 0.800263 | 1.564211e-48 | -8.615850e-47 |
| Msa0493710 | Msa0684590 | 0.816236 | 6.137741e-52 | -8.615850e-47 |
| Msa0493710 | Msa0684600 | 0.806309 | 8.755527e-50 | -8.615850e-47 |
| Msa0493710 | Msa0711240 | 0.800868 | 1.177887e-48 | -8.615850e-47 |
| Msa0493710 | Msa0715260 | 0.820964 | 5.192211e-53 | -8.615850e-47 |
| Msa0493710 | Msa0721260 | 0.842237 | 2.922483e-58 | -8.615850e-47 |
| Msa0493710 | Msa0727480 | 0.802605 | 5.181596e-49 | -8.615850e-47 |
| Msa0493710 | Msa0728520 | 0.845989 | 2.878887e-59 | -8.615850e-47 |
| Msa0493710 | Msa0735340 | 0.808841 | 2.540642e-50 | -8.615850e-47 |
| Msa0493710 | Msa0738660 | 0.809300 | 2.025166e-50 | -8.615850e-47 |
| Msa0493710 | Msa0747500 | 0.818064 | 2.382013e-52 | -8.615850e-47 |
| Msa0493710 | Msa0753410 | 0.814585 | 1.429399e-51 | -8.615850e-47 |
| Msa0493710 | Msa0757240 | 0.820130 | 8.071302e-53 | -8.615850e-47 |
| Msa0493710 | Msa0758150 | 0.802981 | 4.333800e-49 | -8.615850e-47 |
| Msa0493710 | Msa0776540 | 0.848669 | 5.289392e-60 | -8.615850e-47 |
| Msa0493710 | Msa0787860 | 0.840714 | 7.361196e-58 | -8.615850e-47 |
| Msa0493710 | Msa0789410 | 0.800654 | 1.302270e-48 | -8.615850e-47 |
| Msa0493710 | Msa0793570 | 0.802836 | 4.644621e-49 | -8.615850e-47 |
| Msa0493710 | Msa0795330 | 0.819687 | 1.018839e-52 | -8.615850e-47 |
| Msa0493710 | Msa0798230 | 0.820623 | 6.220875e-53 | -8.615850e-47 |
| Msa0493710 | Msa0814660 | 0.801137 | 1.037569e-48 | -8.615850e-47 |
| Msa0493710 | Msa0816140 | 0.843030 | 1.800044e-58 | -8.615850e-47 |
| Msa0493710 | Msa0817100 | 0.818250 | 2.161529e-52 | -8.615850e-47 |
| Msa0493710 | Msa0824850 | 0.852567 | 4.242469e-61 | -8.615850e-47 |
| Msa0493710 | Msa0824860 | 0.808357 | 3.222663e-50 | -8.615850e-47 |
| Msa0493710 | Msa0836740 | 0.820644 | 6.150184e-53 | -8.615850e-47 |
| Msa0493710 | Msa0854860 | 0.802269 | 6.077746e-49 | -8.615850e-47 |
| Msa0493710 | Msa0863840 | 0.808107 | 3.642638e-50 | -8.615850e-47 |
| Msa0493710 | Msa0863850 | 0.816249 | 6.094663e-52 | -8.615850e-47 |
| Msa0493710 | Msa0863860 | 0.844531 | 7.137144e-59 | -8.615850e-47 |
| Msa0493710 | Msa0864160 | 0.841966 | 3.447782e-58 | -8.615850e-47 |
| Msa0493710 | Msa0868870 | 0.807059 | 6.080086e-50 | -8.615850e-47 |
| Msa0493710 | Msa0883610 | 0.827263 | 1.722774e-54 | -8.615850e-47 |
| Msa0493710 | Msa0886370 | 0.837543 | 4.885198e-57 | -8.615850e-47 |
| Msa0493710 | Msa0896920 | 0.853122 | 2.943106e-61 | -8.615850e-47 |
| Msa0493710 | Msa0896950 | 0.803169 | 3.962827e-49 | -8.615850e-47 |
| Msa0493710 | Msa0896990 | 0.815199 | 1.044996e-51 | -8.615850e-47 |
| Msa0493710 | Msa0902340 | 0.804730 | 1.877312e-49 | -8.615850e-47 |
| Msa0493710 | Msa0910570 | 0.833518 | 5.092952e-56 | -8.615850e-47 |
| Msa0493710 | Msa0932910 | 0.807419 | 5.102907e-50 | -8.615850e-47 |
| Msa0493710 | Msa0932930 | 0.823373 | 1.434272e-53 | -8.615850e-47 |
| Msa0493710 | Msa0948460 | 0.812199 | 4.779770e-51 | -8.615850e-47 |
| Msa0493710 | Msa0951060 | 0.816672 | 4.902072e-52 | -8.615850e-47 |
| Msa0493710 | Msa0962290 | 0.807161 | 5.785451e-50 | -8.615850e-47 |
| Msa0493710 | Msa0970790 | 0.829497 | 4.979429e-55 | -8.615850e-47 |
| Msa0493710 | Msa0985250 | 0.819540 | 1.100680e-52 | -8.615850e-47 |
| Msa0493710 | Msa0985260 | 0.816809 | 4.567562e-52 | -8.615850e-47 |
| Msa0493710 | Msa0985290 | 0.831678 | 1.456635e-55 | -8.615850e-47 |
| Msa0493710 | Msa0987550 | 0.809077 | 2.261108e-50 | -8.615850e-47 |
| Msa0493710 | Msa0996940 | 0.816403 | 5.629392e-52 | -8.615850e-47 |
| Msa0493710 | Msa0996980 | 0.820799 | 5.665634e-53 | -8.615850e-47 |
| Msa0493710 | Msa1007930 | 0.802492 | 5.469258e-49 | -8.615850e-47 |
| Msa0493710 | Msa1024420 | 0.802017 | 6.849568e-49 | -8.615850e-47 |
| Msa0493710 | Msa1026170 | 0.801824 | 7.504992e-49 | -8.615850e-47 |
| Msa0493710 | Msa1046220 | 0.824793 | 6.658426e-54 | -8.615850e-47 |
| Msa0493710 | Msa1048390 | 0.801141 | 1.035624e-48 | -8.615850e-47 |
| Msa0493710 | Msa1061670 | 0.811376 | 7.220483e-51 | -8.615850e-47 |
| Msa0493710 | Msa1064940 | 0.821735 | 3.446776e-53 | -8.615850e-47 |
| Msa0493710 | Msa1074490 | 0.802878 | 4.552431e-49 | -8.615850e-47 |
| Msa0493710 | Msa1083100 | 0.813771 | 2.161680e-51 | -8.615850e-47 |
| Msa0493710 | Msa1087380 | 0.805178 | 1.513392e-49 | -8.615850e-47 |
| Msa0493710 | Msa1099640 | 0.834563 | 2.788384e-56 | -8.615850e-47 |
| Msa0493710 | Msa1099650 | 0.800320 | 1.523265e-48 | -8.615850e-47 |
| Msa0493710 | Msa1106960 | 0.802656 | 5.057369e-49 | -8.615850e-47 |
| Msa0493710 | Msa1109540 | 0.801917 | 7.180202e-49 | -8.615850e-47 |
| Msa0493710 | Msa1110040 | 0.823046 | 1.710005e-53 | -8.615850e-47 |
| Msa0493710 | Msa1138110 | 0.828242 | 1.002162e-54 | -8.615850e-47 |
| Msa0493710 | Msa1153690 | 0.821190 | 4.605444e-53 | -8.615850e-47 |
| Msa0493710 | Msa1173290 | 0.831590 | 1.531770e-55 | -8.615850e-47 |
| Msa0493710 | Msa1206330 | 0.806995 | 6.274422e-50 | -8.615850e-47 |
| Msa0493710 | Msa1206380 | 0.806061 | 9.875530e-50 | -8.615850e-47 |
| Msa0493710 | Msa1208830 | 0.835915 | 1.270679e-56 | -8.615850e-47 |
| Msa0493710 | Msa1208910 | 0.844261 | 8.436118e-59 | -8.615850e-47 |
| Msa0493710 | Msa1221170 | 0.828232 | 1.008115e-54 | -8.615850e-47 |
| Msa0493710 | Msa1233650 | 0.805409 | 1.353696e-49 | -8.615850e-47 |
| Msa0493710 | Msa1265500 | 0.829166 | 5.993854e-55 | -8.615850e-47 |
| Msa0493710 | Msa1323150 | 0.812575 | 3.957404e-51 | -8.615850e-47 |
| Msa0493710 | Msa1339490 | 0.803670 | 3.119704e-49 | -8.615850e-47 |
| Msa0493710 | Msa1355330 | 0.823259 | 1.524761e-53 | -8.615850e-47 |
| Msa0493710 | Msa1378950 | 0.811080 | 8.372082e-51 | -8.615850e-47 |
| Msa0493710 | Msa1395690 | 0.831647 | 1.482849e-55 | -8.615850e-47 |
| Msa0493710 | Msa1398110 | 0.841420 | 4.803869e-58 | -8.615850e-47 |
| Msa0493710 | Msa1411550 | 0.818459 | 1.938285e-52 | -8.615850e-47 |
| Msa0493710 | Msa1419210 | 0.809971 | 1.453110e-50 | -8.615850e-47 |
| Msa0493710 | Msa1448150 | 0.803324 | 3.681189e-49 | -8.615850e-47 |
| Msa0493710 | Msa1453650 | 0.806162 | 9.405721e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0493710 | MtrunA17_Chr7g0272501 | 91.536 | 319 | 27 | 0 | 1 | 319 | 1 | 319 | 0.0 | 622 |
| Msa0493710 | MtrunA17_Chr7g0272531 | 91.223 | 319 | 28 | 0 | 1 | 319 | 31 | 349 | 0.0 | 619 |
| Msa0493710 | MtrunA17_Chr7g0272171 | 89.028 | 319 | 35 | 0 | 1 | 319 | 1 | 319 | 0.0 | 602 |
| Msa0493710 | MtrunA17_Chr7g0272181 | 86.520 | 319 | 43 | 0 | 1 | 319 | 1 | 319 | 0.0 | 585 |
| Msa0493710 | MtrunA17_Chr7g0272481 | 85.580 | 319 | 46 | 0 | 1 | 319 | 1 | 319 | 0.0 | 582 |
| Msa0493710 | MtrunA17_Chr7g0272431 | 76.012 | 321 | 73 | 2 | 1 | 319 | 1 | 319 | 0.0 | 514 |
| Msa0493710 | MtrunA17_Chr7g0272441 | 76.012 | 321 | 73 | 2 | 1 | 319 | 1 | 319 | 0.0 | 506 |
| Msa0493710 | MtrunA17_Chr7g0272451 | 74.608 | 319 | 78 | 2 | 1 | 319 | 1 | 316 | 0.0 | 503 |
| Msa0493710 | MtrunA17_Chr4g0000111 | 71.827 | 323 | 86 | 3 | 1 | 319 | 1 | 322 | 2.06e-180 | 501 |
| Msa0493710 | MtrunA17_Chr7g0269471 | 61.755 | 319 | 120 | 2 | 1 | 319 | 1 | 317 | 2.71e-141 | 401 |
| Msa0493710 | MtrunA17_Chr4g0067581 | 60.125 | 321 | 124 | 3 | 1 | 319 | 37 | 355 | 8.16e-141 | 402 |
| Msa0493710 | MtrunA17_Chr8g0372491 | 47.649 | 319 | 163 | 3 | 1 | 319 | 3 | 317 | 8.89e-106 | 311 |
| Msa0493710 | MtrunA17_Chr7g0272471 | 83.333 | 156 | 26 | 0 | 1 | 156 | 1 | 156 | 5.41e-97 | 283 |
| Msa0493710 | MtrunA17_Chr1g0192291 | 73.585 | 159 | 38 | 2 | 1 | 156 | 1 | 158 | 1.50e-85 | 254 |
| Msa0493710 | MtrunA17_Chr2g0324141 | 35.514 | 321 | 193 | 6 | 1 | 318 | 1 | 310 | 1.89e-64 | 206 |
| Msa0493710 | MtrunA17_Chr4g0047701 | 35.826 | 321 | 191 | 6 | 1 | 318 | 1 | 309 | 2.24e-63 | 203 |
| Msa0493710 | MtrunA17_Chr2g0324161 | 34.891 | 321 | 195 | 7 | 1 | 318 | 1 | 310 | 3.54e-61 | 197 |
| Msa0493710 | MtrunA17_Chr4g0047681 | 34.891 | 321 | 194 | 6 | 1 | 318 | 1 | 309 | 1.64e-60 | 196 |
| Msa0493710 | MtrunA17_Chr3g0086531 | 90.411 | 73 | 7 | 0 | 80 | 152 | 1 | 73 | 5.65e-45 | 148 |
| Msa0493710 | MtrunA17_Chr7g0272461 | 64.151 | 106 | 34 | 2 | 178 | 281 | 2 | 105 | 8.76e-40 | 137 |
| Msa0493710 | MtrunA17_Chr7g0272391 | 59.829 | 117 | 25 | 2 | 161 | 276 | 1 | 96 | 9.05e-38 | 130 |
| Msa0493710 | MtrunA17_Chr7g0272511 | 86.842 | 38 | 5 | 0 | 278 | 315 | 29 | 66 | 4.56e-16 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0493710 | AT3G05600.1 | 60.802 | 324 | 122 | 4 | 1 | 319 | 1 | 324 | 1.34e-147 | 418 |
| Msa0493710 | AT4G02340.1 | 58.307 | 319 | 130 | 3 | 1 | 319 | 1 | 316 | 4.11e-138 | 394 |
| Msa0493710 | AT2G26740.1 | 60.248 | 322 | 121 | 4 | 4 | 319 | 1 | 321 | 8.93e-126 | 363 |
| Msa0493710 | AT2G26750.1 | 58.879 | 321 | 126 | 4 | 4 | 319 | 1 | 320 | 2.50e-121 | 351 |
| Msa0493710 | AT4G15960.1 | 52.308 | 325 | 148 | 3 | 1 | 319 | 51 | 374 | 6.41e-121 | 352 |
| Msa0493710 | AT3G05600.2 | 62.551 | 243 | 86 | 4 | 1 | 238 | 1 | 243 | 3.15e-109 | 318 |
| Msa0493710 | AT4G15955.3 | 49.693 | 326 | 126 | 4 | 5 | 319 | 6 | 304 | 4.23e-106 | 312 |
| Msa0493710 | AT3G51000.1 | 46.789 | 327 | 153 | 6 | 3 | 319 | 4 | 319 | 6.15e-102 | 302 |
| Msa0493710 | AT4G15955.2 | 58.621 | 174 | 62 | 2 | 5 | 168 | 6 | 179 | 5.51e-69 | 213 |
| Msa0493710 | AT4G15955.1 | 58.788 | 165 | 58 | 2 | 5 | 159 | 6 | 170 | 8.55e-65 | 202 |
Find 112 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGTTTCTTCATGGCTTCC+TGG | 0.181967 | 3_4:+19582132 | Msa0493710:CDS |
| CCAATTGTCTTGTTTCTTCA+TGG | 0.206846 | 3_4:+19582124 | Msa0493710:CDS |
| ATTATTAGGTACGATATTAT+TGG | 0.234206 | 3_4:-19584478 | None:intergenic |
| ATACATTATTTAGAGTTAAA+TGG | 0.239442 | 3_4:-19584418 | None:intergenic |
| TTATTATATATGTAGATTTC+AGG | 0.260713 | 3_4:+19582495 | Msa0493710:CDS |
| AAAATGCATATTGCTGAAAA+AGG | 0.266560 | 3_4:+19582091 | Msa0493710:CDS |
| TACTCTCCCTTGGGAAATAT+TGG | 0.280214 | 3_4:-19583689 | None:intergenic |
| TTCATGGCTTCCTGGAACTC+TGG | 0.312133 | 3_4:+19582140 | Msa0493710:CDS |
| ACCACAGGAACCAGGCAAAA+TGG | 0.316985 | 3_4:+19583595 | Msa0493710:intron |
| GCCCTCACAGCTCGGAAAAC+TGG | 0.342370 | 3_4:+19583662 | Msa0493710:CDS |
| TGTTTCTTGTGGCTCATGAT+TGG | 0.349713 | 3_4:+19582335 | Msa0493710:CDS |
| ATATTTCCCAAGGGAGAGTA+TGG | 0.351665 | 3_4:+19583692 | Msa0493710:CDS |
| TAAAAGGGGTCAGTGAAAAT+TGG | 0.353502 | 3_4:+19584544 | Msa0493710:three_prime_UTR |
| GTTTCTTGTGGCTCATGATT+GGG | 0.353911 | 3_4:+19582336 | Msa0493710:CDS |
| GTCTCCAAATTTGAGAAAAC+AGG | 0.360081 | 3_4:+19583785 | Msa0493710:CDS |
| GACAATCACTTCTTCCAGAT+TGG | 0.360761 | 3_4:-19584213 | None:intergenic |
| CATGATTGGGGTGCTATCAT+TGG | 0.366163 | 3_4:+19582349 | Msa0493710:CDS |
| AAAAGACTTGTTACAACAAT+GGG | 0.366484 | 3_4:-19584517 | None:intergenic |
| CCCAAGGGAGAGTATGGAAC+TGG | 0.372941 | 3_4:+19583698 | Msa0493710:CDS |
| TCCTGGAACTCTGGTATTCA+TGG | 0.376261 | 3_4:+19582149 | Msa0493710:CDS |
| GGTAAGGTGTCAGGAGTATC+CGG | 0.384128 | 3_4:-19583728 | None:intergenic |
| AGCCAAGAGGGTAAGGTGTC+AGG | 0.390169 | 3_4:-19583737 | None:intergenic |
| TTTGAGAAAACAGGCTTCAC+TGG | 0.397561 | 3_4:+19583794 | Msa0493710:CDS |
| TCAGTGAAAATTGGTGCATT+AGG | 0.398465 | 3_4:+19584553 | Msa0493710:three_prime_UTR |
| CTCTTGTTTGTCAATTTCTC+CGG | 0.400945 | 3_4:-19581838 | None:intergenic |
| GAAGAAGTGATTGTCCAAAA+AGG | 0.401350 | 3_4:+19584221 | Msa0493710:CDS |
| GATGCCATGCATGCTGCTTA+TGG | 0.401538 | 3_4:+19582466 | Msa0493710:CDS |
| CTCCTGACACCTTACCCTCT+TGG | 0.407073 | 3_4:+19583735 | Msa0493710:CDS |
| TTGCTGCTAAGTCTAATTCC+TGG | 0.421733 | 3_4:+19584343 | Msa0493710:three_prime_UTR |
| GCCATGAATACCAGAGTTCC+AGG | 0.422356 | 3_4:-19582150 | None:intergenic |
| TTACTTGTATTGCAGAAATT+GGG | 0.423076 | 3_4:+19584058 | Msa0493710:intron |
| GTGCCTGTGAAATTCATTAC+AGG | 0.432209 | 3_4:+19584116 | Msa0493710:CDS |
| CAAGGAAGATGTGCCCAATC+TGG | 0.434486 | 3_4:+19584199 | Msa0493710:CDS |
| TCACCATAGCCACGAAGATC+AGG | 0.444071 | 3_4:-19582220 | None:intergenic |
| CAGCTACACAGGGTTTCATA+TGG | 0.449902 | 3_4:+19582267 | Msa0493710:CDS |
| ACAATCACTTCTTCCAGATT+GGG | 0.454843 | 3_4:-19584212 | None:intergenic |
| CTAGTGGGAATATACTGTAT+TGG | 0.458467 | 3_4:+19581916 | Msa0493710:five_prime_UTR |
| CCATGAAGAAACAAGACAAT+TGG | 0.459751 | 3_4:-19582124 | None:intergenic |
| AACGTAGGTGGTTGGTTAGC+CGG | 0.463569 | 3_4:+19581819 | Msa0493710:five_prime_UTR |
| GCTCCTGATCTTCGTGGCTA+TGG | 0.464887 | 3_4:+19582217 | Msa0493710:CDS |
| CCCAGTTCCATACTCTCCCT+TGG | 0.465033 | 3_4:-19583699 | None:intergenic |
| ATACACCTCACTAAACTTGA+AGG | 0.465604 | 3_4:+19584154 | Msa0493710:CDS |
| TTCTGTAAGCCAAGAGGGTA+AGG | 0.471828 | 3_4:-19583744 | None:intergenic |
| GCCATAAAATTAAAATATGT+TGG | 0.487497 | 3_4:-19581948 | None:intergenic |
| CCAGTTCCATACTCTCCCTT+GGG | 0.505497 | 3_4:-19583698 | None:intergenic |
| TACACAGGGTTTCATATGGT+TGG | 0.511886 | 3_4:+19582271 | Msa0493710:CDS |
| GCTACCGTGTCATAGTTAGA+TGG | 0.513735 | 3_4:-19584650 | None:intergenic |
| CACAGAACAGTGGAAGTGAA+TGG | 0.515742 | 3_4:+19582064 | Msa0493710:CDS |
| GTGTAGCTGCTTATTGAAGA+TGG | 0.516512 | 3_4:-19582253 | None:intergenic |
| TCTTCAATAAGCAGCTACAC+AGG | 0.519820 | 3_4:+19582256 | Msa0493710:CDS |
| CAAAAGACTTGTTACAACAA+TGG | 0.521341 | 3_4:-19584518 | None:intergenic |
| GGGAGCTAAGAGCTACAATC+TGG | 0.528583 | 3_4:-19582177 | None:intergenic |
| GTGGTGATGATACTTTATAA+TGG | 0.531130 | 3_4:-19581982 | None:intergenic |
| TTTAGGGTTTCTTCGGAGCA+AGG | 0.536936 | 3_4:-19582431 | None:intergenic |
| GAGCCACGGCATGGTAGCCG+AGG | 0.537610 | 3_4:-19582198 | None:intergenic |
| TTTCTTGTGGCTCATGATTG+GGG | 0.538324 | 3_4:+19582337 | Msa0493710:CDS |
| AGGCAAAATGGAAGCTGAGA+TGG | 0.540634 | 3_4:+19583607 | Msa0493710:CDS |
| GCTTATTGAAGATGGAGAAT+CGG | 0.544508 | 3_4:-19582245 | None:intergenic |
| TCTCCCTTGGGAAATATTGG+AGG | 0.546141 | 3_4:-19583686 | None:intergenic |
| ATCTCCATAAGCAGCATGCA+TGG | 0.554133 | 3_4:-19582470 | None:intergenic |
| GATATTATTGGCGACCCTTG+TGG | 0.557208 | 3_4:-19584466 | None:intergenic |
| ATTGTAGCTCTTAGCTCCCT+CGG | 0.557522 | 3_4:+19582181 | Msa0493710:CDS |
| ATTAACAAAACGTAGGTGGT+TGG | 0.560040 | 3_4:+19581811 | Msa0493710:five_prime_UTR |
| CTCCCTCGGCTACCATGCCG+TGG | 0.565985 | 3_4:+19582195 | Msa0493710:CDS |
| ATTGGGGTGCTATCATTGGT+TGG | 0.568173 | 3_4:+19582353 | Msa0493710:CDS |
| GCCGTGGCTCCTGATCTTCG+TGG | 0.568982 | 3_4:+19582211 | Msa0493710:CDS |
| GAGCTGATGGCACCATGGAA+TGG | 0.569405 | 3_4:+19584080 | Msa0493710:CDS |
| TGGTTCATACCACAGGAACC+AGG | 0.570796 | 3_4:+19583587 | Msa0493710:intron |
| GAAGGAATATATCCATGGTG+GGG | 0.572924 | 3_4:+19584172 | Msa0493710:CDS |
| GTTAGTTACACTGAGAGAGA+TGG | 0.573652 | 3_4:+19582030 | Msa0493710:exon |
| TTAGGGTTTCTTCGGAGCAA+GGG | 0.576719 | 3_4:-19582430 | None:intergenic |
| TGAAGGAATATATCCATGGT+GGG | 0.577926 | 3_4:+19584171 | Msa0493710:CDS |
| TCATCTTCTGTAAGCCAAGA+GGG | 0.578236 | 3_4:-19583749 | None:intergenic |
| TCACCTGTAATGAATTTCAC+AGG | 0.581259 | 3_4:-19584119 | None:intergenic |
| TGGTCCTCCAATATTTCCCA+AGG | 0.588717 | 3_4:+19583682 | Msa0493710:CDS |
| AAGGAATATATCCATGGTGG+GGG | 0.588801 | 3_4:+19584173 | Msa0493710:CDS |
| GGCTCAAAATAGCTTCCACA+AGG | 0.589720 | 3_4:+19584451 | Msa0493710:three_prime_UTR |
| GAAGCTGAGATGGCTGAAGT+TGG | 0.590883 | 3_4:+19583617 | Msa0493710:CDS |
| CTTCAATAAGCAGCTACACA+GGG | 0.595237 | 3_4:+19582257 | Msa0493710:CDS |
| ATGGAATGGAGTGAAAATCA+AGG | 0.596236 | 3_4:+19584094 | Msa0493710:CDS |
| ATTTATTAACAAAACGTAGG+TGG | 0.597519 | 3_4:+19581807 | Msa0493710:five_prime_UTR |
| GTATGGAACTGGGTTCGACC+CGG | 0.604103 | 3_4:+19583709 | Msa0493710:CDS |
| ATAATTTATTAACAAAACGT+AGG | 0.604638 | 3_4:+19581804 | Msa0493710:five_prime_UTR |
| GAAGATCAGGAGCCACGGCA+TGG | 0.605772 | 3_4:-19582207 | None:intergenic |
| GAGAAAACAGGCTTCACTGG+AGG | 0.606396 | 3_4:+19583797 | Msa0493710:CDS |
| CAATACAGTATATTCCCACT+AGG | 0.609225 | 3_4:-19581915 | None:intergenic |
| AACTTGAAGGAATATATCCA+TGG | 0.609632 | 3_4:+19584167 | Msa0493710:CDS |
| CCAAGGGAGAGTATGGAACT+GGG | 0.609678 | 3_4:+19583699 | Msa0493710:CDS |
| TTGCAGAAATTGGGAGCTGA+TGG | 0.610067 | 3_4:+19584067 | Msa0493710:intron |
| ATTTGGAGACATAATAAGCA+AGG | 0.610704 | 3_4:-19583772 | None:intergenic |
| CACACGCAACTATAAGAACC+AGG | 0.612035 | 3_4:-19584361 | None:intergenic |
| AGCCACGGCATGGTAGCCGA+GGG | 0.617386 | 3_4:-19582197 | None:intergenic |
| GTAAGGTGTCAGGAGTATCC+GGG | 0.618284 | 3_4:-19583727 | None:intergenic |
| ACGGTAGCAGTTCAAACACT+TGG | 0.618482 | 3_4:+19584665 | Msa0493710:three_prime_UTR |
| GGGAACACTGAGACAAACAT+AGG | 0.620100 | 3_4:-19582410 | None:intergenic |
| TTGAAGGAATATATCCATGG+TGG | 0.621968 | 3_4:+19584170 | Msa0493710:CDS |
| CAACAATCAAGAAGCAGCAG+AGG | 0.622672 | 3_4:+19584256 | Msa0493710:CDS |
| GCCACGAAGATCAGGAGCCA+CGG | 0.626919 | 3_4:-19582212 | None:intergenic |
| ATATTCCTTCAAGTTTAGTG+AGG | 0.634199 | 3_4:-19584159 | None:intergenic |
| CGGAGAAATTGACAAACAAG+AGG | 0.637219 | 3_4:+19581839 | Msa0493710:five_prime_UTR |
| AGCTAAGAGCTACAATCTGG+TGG | 0.642643 | 3_4:-19582174 | None:intergenic |
| TGTTGATCAAGTGTTTCTTG+TGG | 0.646029 | 3_4:+19582324 | Msa0493710:CDS |
| ATTGGGAGCTGATGGCACCA+TGG | 0.649732 | 3_4:+19584075 | Msa0493710:CDS |
| TGTCGGGGCGAAACATGCAA+AGG | 0.661179 | 3_4:-19582378 | None:intergenic |
| GTCATCTTCTGTAAGCCAAG+AGG | 0.661237 | 3_4:-19583750 | None:intergenic |
| ACCGTGTCATAGTTAGATGG+AGG | 0.676765 | 3_4:-19584647 | None:intergenic |
| AGGAATAGAACACAGAACAG+TGG | 0.676997 | 3_4:+19582054 | Msa0493710:CDS |
| GTTACACTGAGAGAGATGGA+AGG | 0.677077 | 3_4:+19582034 | Msa0493710:exon |
| GAAAATCAATAAGTGCAACA+AGG | 0.701740 | 3_4:-19582297 | None:intergenic |
| TCCTCCATCTAACTATGACA+CGG | 0.704529 | 3_4:+19584646 | Msa0493710:three_prime_UTR |
| GGTCCTCCAATATTTCCCAA+GGG | 0.706108 | 3_4:+19583683 | Msa0493710:CDS |
| GCTCAAAATAGCTTCCACAA+GGG | 0.727477 | 3_4:+19584452 | Msa0493710:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATTTATTTTTTTTGAATA+AGG | - | chr3_4:19581893-19581912 | None:intergenic | 10.0% |
| !! | GTTAAATTAAATATATTATG+TGG | - | chr3_4:19583093-19583112 | None:intergenic | 10.0% |
| !! | ATAATTTATTAACAAAACGT+AGG | + | chr3_4:19581804-19581823 | Msa0493710:five_prime_UTR | 15.0% |
| !!! | CATTTATTTTTGTTTTCATT+TGG | - | chr3_4:19581867-19581886 | None:intergenic | 15.0% |
| !!! | ACCAACATATTTTAATTTTA+TGG | + | chr3_4:19581947-19581966 | Msa0493710:five_prime_UTR | 15.0% |
| !!! | AACATATTTTAATTTTATGG+CGG | + | chr3_4:19581950-19581969 | Msa0493710:five_prime_UTR | 15.0% |
| !! | TTATTATATATGTAGATTTC+AGG | + | chr3_4:19582495-19582514 | Msa0493710:CDS | 15.0% |
| !! | GAAAATGTTTATTAGAATTT+AGG | + | chr3_4:19582595-19582614 | Msa0493710:intron | 15.0% |
| !!! | TATTTTAAATTTTGTGATCA+CGG | + | chr3_4:19582701-19582720 | Msa0493710:intron | 15.0% |
| !!! | ATTTAATCTTTTTTTAATGG+TGG | + | chr3_4:19582840-19582859 | Msa0493710:intron | 15.0% |
| !!! | ATGGAAATAAATTGTAATTT+TGG | - | chr3_4:19583031-19583050 | None:intergenic | 15.0% |
| !! | AAAATTACAATTTATTTCCA+TGG | + | chr3_4:19583030-19583049 | Msa0493710:intron | 15.0% |
| !! | TAATTTAGTGTTAAAATTTG+AGG | - | chr3_4:19583056-19583075 | None:intergenic | 15.0% |
| !! | TCTGATTCAAAATATTATAT+TGG | - | chr3_4:19583503-19583522 | None:intergenic | 15.0% |
| !!! | ATACATTATTTAGAGTTAAA+TGG | - | chr3_4:19584421-19584440 | None:intergenic | 15.0% |
| !!! | AAATAATGTATGTATCTTTT+TGG | + | chr3_4:19584430-19584449 | Msa0493710:three_prime_UTR | 15.0% |
| !!! | TATGTATGTTTTGTATTATT+AGG | - | chr3_4:19584495-19584514 | None:intergenic | 15.0% |
| !! | AAAAAATAAATGTTTCCTAG+TGG | + | chr3_4:19581900-19581919 | Msa0493710:five_prime_UTR | 20.0% |
| !! | AAAAATAAATGTTTCCTAGT+GGG | + | chr3_4:19581901-19581920 | Msa0493710:five_prime_UTR | 20.0% |
| !! | GCCATAAAATTAAAATATGT+TGG | - | chr3_4:19581951-19581970 | None:intergenic | 20.0% |
| !!! | GAAATTTCAATATTTTGATG+TGG | - | chr3_4:19582004-19582023 | None:intergenic | 20.0% |
| !! | GGAAAATTAGTAGTAATTTA+AGG | - | chr3_4:19582532-19582551 | None:intergenic | 20.0% |
| !!! | ATATTATGTGGTTTAGAATA+TGG | - | chr3_4:19583081-19583100 | None:intergenic | 20.0% |
| !! | TTAATTTAACAGTCTAGATT+TGG | + | chr3_4:19583103-19583122 | Msa0493710:intron | 20.0% |
| !! | GAGTAATATTGAATATGTTA+AGG | + | chr3_4:19583311-19583330 | Msa0493710:intron | 20.0% |
| !! | TTTGTTTATGTAAAAAGAAG+TGG | + | chr3_4:19583527-19583546 | Msa0493710:intron | 20.0% |
| !! | GTATTGTCAACATATATTTA+TGG | - | chr3_4:19583887-19583906 | None:intergenic | 20.0% |
| !!! | TATATGTTGACAATACTTTT+TGG | + | chr3_4:19583891-19583910 | Msa0493710:intron | 20.0% |
| !! | ATTATTAGGTACGATATTAT+TGG | - | chr3_4:19584481-19584500 | None:intergenic | 20.0% |
| !!! | AACAAGTCTTTTGAATTAAA+AGG | + | chr3_4:19584528-19584547 | Msa0493710:three_prime_UTR | 20.0% |
| !!! | ACAAGTCTTTTGAATTAAAA+GGG | + | chr3_4:19584529-19584548 | Msa0493710:three_prime_UTR | 20.0% |
| ! | ATTTATTAACAAAACGTAGG+TGG | + | chr3_4:19581807-19581826 | Msa0493710:five_prime_UTR | 25.0% |
| ! | AAAATGCATATTGCTGAAAA+AGG | + | chr3_4:19582091-19582110 | Msa0493710:CDS | 25.0% |
| ! | TAAATATATCCAAACAAGAG+TGG | - | chr3_4:19582553-19582572 | None:intergenic | 25.0% |
| ! | TTTGGATATATTTATTCGAG+AGG | + | chr3_4:19582559-19582578 | Msa0493710:intron | 25.0% |
| !! | GTTTATTAGAATTTAGGACA+TGG | + | chr3_4:19582601-19582620 | Msa0493710:intron | 25.0% |
| ! | AAATACCAATATTCGATTGA+AGG | + | chr3_4:19582730-19582749 | Msa0493710:intron | 25.0% |
| ! | TAAATCCTTCAATCGAATAT+TGG | - | chr3_4:19582738-19582757 | None:intergenic | 25.0% |
| !!! | ATCAATTTTGATTCGATTGA+AGG | + | chr3_4:19582757-19582776 | Msa0493710:intron | 25.0% |
| ! | AGTATAGTCTATATCAAAAG+AGG | + | chr3_4:19583207-19583226 | Msa0493710:intron | 25.0% |
| ! | TATTGAATATGTTAAGGTAC+CGG | + | chr3_4:19583317-19583336 | Msa0493710:intron | 25.0% |
| ! | ATGATATGTAGCTAAAAGAA+AGG | - | chr3_4:19583427-19583446 | None:intergenic | 25.0% |
| !! | CTGAATAACATAATTGCTTT+TGG | + | chr3_4:19583567-19583586 | Msa0493710:intron | 25.0% |
| ! | AATATAACATGTATACGTGT+CGG | - | chr3_4:19584005-19584024 | None:intergenic | 25.0% |
| ! | ATTACTTGTATTGCAGAAAT+TGG | + | chr3_4:19584057-19584076 | Msa0493710:intron | 25.0% |
| ! | TTACTTGTATTGCAGAAATT+GGG | + | chr3_4:19584058-19584077 | Msa0493710:intron | 25.0% |
| !!! | AAAAGACTTGTTACAACAAT+GGG | - | chr3_4:19584520-19584539 | None:intergenic | 25.0% |
| !! | CAAGTCTTTTGAATTAAAAG+GGG | + | chr3_4:19584530-19584549 | Msa0493710:three_prime_UTR | 25.0% |
| ! | GTGGTGATGATACTTTATAA+TGG | - | chr3_4:19581985-19582004 | None:intergenic | 30.0% |
| ATTGCTGAAAAAGGAAAACA+AGG | + | chr3_4:19582100-19582119 | Msa0493710:CDS | 30.0% | |
| GAAAATCAATAAGTGCAACA+AGG | - | chr3_4:19582300-19582319 | None:intergenic | 30.0% | |
| !!! | TGTTGCACTTATTGATTTTC+TGG | + | chr3_4:19582300-19582319 | Msa0493710:CDS | 30.0% |
| !!! | GTTGCACTTATTGATTTTCT+GGG | + | chr3_4:19582301-19582320 | Msa0493710:CDS | 30.0% |
| !! | AACATAGGCTTTGATTTTGT+CGG | - | chr3_4:19582398-19582417 | None:intergenic | 30.0% |
| !!! | TCTTGATTTTAGGGTTTCTT+CGG | - | chr3_4:19582441-19582460 | None:intergenic | 30.0% |
| ! | CATCAACTGTCTTGATTTTA+GGG | - | chr3_4:19582450-19582469 | None:intergenic | 30.0% |
| ! | ACTAATTTTCCACTCTTGTT+TGG | + | chr3_4:19582541-19582560 | Msa0493710:intron | 30.0% |
| TATTTATTCGAGAGGACTTA+TGG | + | chr3_4:19582567-19582586 | Msa0493710:intron | 30.0% | |
| !!! | AATCTTTTTTTAATGGTGGC+CGG | + | chr3_4:19582844-19582863 | Msa0493710:intron | 30.0% |
| GACAATGCATAATATATGCA+AGG | - | chr3_4:19582885-19582904 | None:intergenic | 30.0% | |
| AAATTGAAACCAACATCCAT+GGG | - | chr3_4:19582972-19582991 | None:intergenic | 30.0% | |
| GTGCTTATAATATAAGAGTC+AGG | - | chr3_4:19583165-19583184 | None:intergenic | 30.0% | |
| TATCAAAAGAGGAAACCTTA+TGG | + | chr3_4:19583218-19583237 | Msa0493710:intron | 30.0% | |
| !!! | GATTTGTTGTGCATTTTGTA+AGG | + | chr3_4:19583289-19583308 | Msa0493710:intron | 30.0% |
| TCATGCAATACTAAAGTTGA+TGG | - | chr3_4:19583366-19583385 | None:intergenic | 30.0% | |
| AGTATTGCATGACTTCATAA+TGG | + | chr3_4:19583374-19583393 | Msa0493710:intron | 30.0% | |
| GGTCATACTTCAAAATTTAG+AGG | - | chr3_4:19583451-19583470 | None:intergenic | 30.0% | |
| !! | GATACGATTCATTTTGAGTA+GGG | - | chr3_4:19583472-19583491 | None:intergenic | 30.0% |
| ATTTGGAGACATAATAAGCA+AGG | - | chr3_4:19583775-19583794 | None:intergenic | 30.0% | |
| ! | ATATTCCTTCAAGTTTAGTG+AGG | - | chr3_4:19584162-19584181 | None:intergenic | 30.0% |
| AACTTGAAGGAATATATCCA+TGG | + | chr3_4:19584167-19584186 | Msa0493710:CDS | 30.0% | |
| !! | CAAAAGACTTGTTACAACAA+TGG | - | chr3_4:19584521-19584540 | None:intergenic | 30.0% |
| ATTAACAAAACGTAGGTGGT+TGG | + | chr3_4:19581811-19581830 | Msa0493710:five_prime_UTR | 35.0% | |
| ! | CTCTTGTTTGTCAATTTCTC+CGG | - | chr3_4:19581841-19581860 | None:intergenic | 35.0% |
| CAATACAGTATATTCCCACT+AGG | - | chr3_4:19581918-19581937 | None:intergenic | 35.0% | |
| CTAGTGGGAATATACTGTAT+TGG | + | chr3_4:19581916-19581935 | Msa0493710:five_prime_UTR | 35.0% | |
| CCATGAAGAAACAAGACAAT+TGG | - | chr3_4:19582127-19582146 | None:intergenic | 35.0% | |
| !! | CCAATTGTCTTGTTTCTTCA+TGG | + | chr3_4:19582124-19582143 | Msa0493710:CDS | 35.0% |
| GCTTATTGAAGATGGAGAAT+CGG | - | chr3_4:19582248-19582267 | None:intergenic | 35.0% | |
| TGTTGATCAAGTGTTTCTTG+TGG | + | chr3_4:19582324-19582343 | Msa0493710:CDS | 35.0% | |
| !! | ACATAGGCTTTGATTTTGTC+GGG | - | chr3_4:19582397-19582416 | None:intergenic | 35.0% |
| ! | GCATCAACTGTCTTGATTTT+AGG | - | chr3_4:19582451-19582470 | None:intergenic | 35.0% |
| !!! | ATCTTTTTTTAATGGTGGCC+GGG | + | chr3_4:19582845-19582864 | Msa0493710:intron | 35.0% |
| ! | ATTTTTCTCTCATAGTCCCA+TGG | + | chr3_4:19582953-19582972 | Msa0493710:intron | 35.0% |
| GAAATTGAAACCAACATCCA+TGG | - | chr3_4:19582973-19582992 | None:intergenic | 35.0% | |
| ! | AGTGTTAAAATTTGAGGCCA+TGG | - | chr3_4:19583050-19583069 | None:intergenic | 35.0% |
| TATCTTACGCCTGATGTTAA+TGG | + | chr3_4:19583137-19583156 | Msa0493710:intron | 35.0% | |
| GAATTAACTGGTCAACCATA+AGG | - | chr3_4:19583236-19583255 | None:intergenic | 35.0% | |
| !! | TGCTTGCTTCTAGAATTAAC+TGG | - | chr3_4:19583248-19583267 | None:intergenic | 35.0% |
| CCAAAATAAGACAACTTGAC+CGG | - | chr3_4:19583339-19583358 | None:intergenic | 35.0% | |
| !!! | CGGTCAAGTTGTCTTATTTT+GGG | + | chr3_4:19583337-19583356 | Msa0493710:intron | 35.0% |
| !! | CGATACGATTCATTTTGAGT+AGG | - | chr3_4:19583473-19583492 | None:intergenic | 35.0% |
| GTCTCCAAATTTGAGAAAAC+AGG | + | chr3_4:19583785-19583804 | Msa0493710:CDS | 35.0% | |
| ! | GAAGCCTGTTTTCTCAAATT+TGG | - | chr3_4:19583792-19583811 | None:intergenic | 35.0% |
| ! | TTTTGTTCTTTGTGCTACCT+CGG | + | chr3_4:19583853-19583872 | Msa0493710:intron | 35.0% |
| TATTTATGGAAAACAACCCG+AGG | - | chr3_4:19583873-19583892 | None:intergenic | 35.0% | |
| ! | TTGATTTTCACTCCATTCCA+TGG | - | chr3_4:19584095-19584114 | None:intergenic | 35.0% |
| ATGGAATGGAGTGAAAATCA+AGG | + | chr3_4:19584094-19584113 | Msa0493710:CDS | 35.0% | |
| TCACCTGTAATGAATTTCAC+AGG | - | chr3_4:19584122-19584141 | None:intergenic | 35.0% | |
| ATACACCTCACTAAACTTGA+AGG | + | chr3_4:19584154-19584173 | Msa0493710:CDS | 35.0% | |
| TTGAAGGAATATATCCATGG+TGG | + | chr3_4:19584170-19584189 | Msa0493710:CDS | 35.0% | |
| TGAAGGAATATATCCATGGT+GGG | + | chr3_4:19584171-19584190 | Msa0493710:CDS | 35.0% | |
| ACAATCACTTCTTCCAGATT+GGG | - | chr3_4:19584215-19584234 | None:intergenic | 35.0% | |
| GAAGAAGTGATTGTCCAAAA+AGG | + | chr3_4:19584221-19584240 | Msa0493710:CDS | 35.0% | |
| TAAAAGGGGTCAGTGAAAAT+TGG | + | chr3_4:19584544-19584563 | Msa0493710:three_prime_UTR | 35.0% | |
| TCAGTGAAAATTGGTGCATT+AGG | + | chr3_4:19584553-19584572 | Msa0493710:three_prime_UTR | 35.0% | |
| CGGAGAAATTGACAAACAAG+AGG | + | chr3_4:19581839-19581858 | Msa0493710:five_prime_UTR | 40.0% | |
| GTTAGTTACACTGAGAGAGA+TGG | + | chr3_4:19582030-19582049 | Msa0493710:exon | 40.0% | |
| AGGAATAGAACACAGAACAG+TGG | + | chr3_4:19582054-19582073 | Msa0493710:CDS | 40.0% | |
| GTGTAGCTGCTTATTGAAGA+TGG | - | chr3_4:19582256-19582275 | None:intergenic | 40.0% | |
| TCTTCAATAAGCAGCTACAC+AGG | + | chr3_4:19582256-19582275 | Msa0493710:CDS | 40.0% | |
| CTTCAATAAGCAGCTACACA+GGG | + | chr3_4:19582257-19582276 | Msa0493710:CDS | 40.0% | |
| TACACAGGGTTTCATATGGT+TGG | + | chr3_4:19582271-19582290 | Msa0493710:CDS | 40.0% | |
| TGTTTCTTGTGGCTCATGAT+TGG | + | chr3_4:19582335-19582354 | Msa0493710:CDS | 40.0% | |
| GTTTCTTGTGGCTCATGATT+GGG | + | chr3_4:19582336-19582355 | Msa0493710:CDS | 40.0% | |
| TTTCTTGTGGCTCATGATTG+GGG | + | chr3_4:19582337-19582356 | Msa0493710:CDS | 40.0% | |
| !! | CATAGGCTTTGATTTTGTCG+GGG | - | chr3_4:19582396-19582415 | None:intergenic | 40.0% |
| !!! | TCTTTTTTTAATGGTGGCCG+GGG | + | chr3_4:19582846-19582865 | Msa0493710:intron | 40.0% |
| CATAATATATGCAAGGTCCG+AGG | - | chr3_4:19582878-19582897 | None:intergenic | 40.0% | |
| AGTCAGGATCCATTAACATC+AGG | - | chr3_4:19583149-19583168 | None:intergenic | 40.0% | |
| !!! | CCGGTCAAGTTGTCTTATTT+TGG | + | chr3_4:19583336-19583355 | Msa0493710:intron | 40.0% |
| !!! | TTGCTTTTGGTTCATACCAC+AGG | + | chr3_4:19583580-19583599 | Msa0493710:intron | 40.0% |
| TAAAAAATGCCCTCACAGCT+CGG | + | chr3_4:19583654-19583673 | Msa0493710:CDS | 40.0% | |
| TACTCTCCCTTGGGAAATAT+TGG | - | chr3_4:19583692-19583711 | None:intergenic | 40.0% | |
| ATATTTCCCAAGGGAGAGTA+TGG | + | chr3_4:19583692-19583711 | Msa0493710:CDS | 40.0% | |
| TCATCTTCTGTAAGCCAAGA+GGG | - | chr3_4:19583752-19583771 | None:intergenic | 40.0% | |
| TTTGAGAAAACAGGCTTCAC+TGG | + | chr3_4:19583794-19583813 | Msa0493710:CDS | 40.0% | |
| TTTGTTCTTTGTGCTACCTC+GGG | + | chr3_4:19583854-19583873 | Msa0493710:intron | 40.0% | |
| GTGCCTGTGAAATTCATTAC+AGG | + | chr3_4:19584116-19584135 | Msa0493710:CDS | 40.0% | |
| GAAGGAATATATCCATGGTG+GGG | + | chr3_4:19584172-19584191 | Msa0493710:CDS | 40.0% | |
| AAGGAATATATCCATGGTGG+GGG | + | chr3_4:19584173-19584192 | Msa0493710:CDS | 40.0% | |
| GACAATCACTTCTTCCAGAT+TGG | - | chr3_4:19584216-19584235 | None:intergenic | 40.0% | |
| AGTGATTGTCCAAAAAGGAG+TGG | + | chr3_4:19584226-19584245 | Msa0493710:CDS | 40.0% | |
| TTGCTGCTAAGTCTAATTCC+TGG | + | chr3_4:19584343-19584362 | Msa0493710:three_prime_UTR | 40.0% | |
| GCTCAAAATAGCTTCCACAA+GGG | + | chr3_4:19584452-19584471 | Msa0493710:three_prime_UTR | 40.0% | |
| TCCTCCATCTAACTATGACA+CGG | + | chr3_4:19584646-19584665 | Msa0493710:three_prime_UTR | 40.0% | |
| GTTACACTGAGAGAGATGGA+AGG | + | chr3_4:19582034-19582053 | Msa0493710:exon | 45.0% | |
| CACAGAACAGTGGAAGTGAA+TGG | + | chr3_4:19582064-19582083 | Msa0493710:CDS | 45.0% | |
| ! | CTTGTTTCTTCATGGCTTCC+TGG | + | chr3_4:19582132-19582151 | Msa0493710:CDS | 45.0% |
| TCCTGGAACTCTGGTATTCA+TGG | + | chr3_4:19582149-19582168 | Msa0493710:CDS | 45.0% | |
| AGCTAAGAGCTACAATCTGG+TGG | - | chr3_4:19582177-19582196 | None:intergenic | 45.0% | |
| ATTGTAGCTCTTAGCTCCCT+CGG | + | chr3_4:19582181-19582200 | Msa0493710:CDS | 45.0% | |
| CAGCTACACAGGGTTTCATA+TGG | + | chr3_4:19582267-19582286 | Msa0493710:CDS | 45.0% | |
| ! | CATGATTGGGGTGCTATCAT+TGG | + | chr3_4:19582349-19582368 | Msa0493710:CDS | 45.0% |
| ! | ATTGGGGTGCTATCATTGGT+TGG | + | chr3_4:19582353-19582372 | Msa0493710:CDS | 45.0% |
| GGGAACACTGAGACAAACAT+AGG | - | chr3_4:19582413-19582432 | None:intergenic | 45.0% | |
| TTAGGGTTTCTTCGGAGCAA+GGG | - | chr3_4:19582433-19582452 | None:intergenic | 45.0% | |
| ! | TTTAGGGTTTCTTCGGAGCA+AGG | - | chr3_4:19582434-19582453 | None:intergenic | 45.0% |
| ATCTCCATAAGCAGCATGCA+TGG | - | chr3_4:19582473-19582492 | None:intergenic | 45.0% | |
| CTTTGTGAGCTTAGCTCAGT+TGG | - | chr3_4:19582912-19582931 | None:intergenic | 45.0% | |
| TCTCATAGTCCCATGGATGT+TGG | + | chr3_4:19582960-19582979 | Msa0493710:intron | 45.0% | |
| TCTCCTTTCACGTGAGAGAT+CGG | + | chr3_4:19582991-19583010 | Msa0493710:intron | 45.0% | |
| ! | TTCTAGAAGCAAGCATGACG+CGG | + | chr3_4:19583253-19583272 | Msa0493710:intron | 45.0% |
| ! | ATCTCAGCTTCCATTTTGCC+TGG | - | chr3_4:19583608-19583627 | None:intergenic | 45.0% |
| AGGCAAAATGGAAGCTGAGA+TGG | + | chr3_4:19583607-19583626 | Msa0493710:CDS | 45.0% | |
| TGGTCCTCCAATATTTCCCA+AGG | + | chr3_4:19583682-19583701 | Msa0493710:CDS | 45.0% | |
| GGTCCTCCAATATTTCCCAA+GGG | + | chr3_4:19583683-19583702 | Msa0493710:CDS | 45.0% | |
| TCTCCCTTGGGAAATATTGG+AGG | - | chr3_4:19583689-19583708 | None:intergenic | 45.0% | |
| TTCTGTAAGCCAAGAGGGTA+AGG | - | chr3_4:19583747-19583766 | None:intergenic | 45.0% | |
| GTCATCTTCTGTAAGCCAAG+AGG | - | chr3_4:19583753-19583772 | None:intergenic | 45.0% | |
| TTGCAGAAATTGGGAGCTGA+TGG | + | chr3_4:19584067-19584086 | Msa0493710:intron | 45.0% | |
| CAACAATCAAGAAGCAGCAG+AGG | + | chr3_4:19584256-19584275 | Msa0493710:CDS | 45.0% | |
| CACACGCAACTATAAGAACC+AGG | - | chr3_4:19584364-19584383 | None:intergenic | 45.0% | |
| GGCTCAAAATAGCTTCCACA+AGG | + | chr3_4:19584451-19584470 | Msa0493710:three_prime_UTR | 45.0% | |
| GATATTATTGGCGACCCTTG+TGG | - | chr3_4:19584469-19584488 | None:intergenic | 45.0% | |
| ACCGTGTCATAGTTAGATGG+AGG | - | chr3_4:19584650-19584669 | None:intergenic | 45.0% | |
| GCTACCGTGTCATAGTTAGA+TGG | - | chr3_4:19584653-19584672 | None:intergenic | 45.0% | |
| ACGGTAGCAGTTCAAACACT+TGG | + | chr3_4:19584665-19584684 | Msa0493710:three_prime_UTR | 45.0% | |
| !!! | TTTATTTAATCTTTTTTTAA+TGG | + | chr3_4:19582837-19582856 | Msa0493710:intron | 5.0% |
| ! | AACGTAGGTGGTTGGTTAGC+CGG | + | chr3_4:19581819-19581838 | Msa0493710:five_prime_UTR | 50.0% |
| TTCATGGCTTCCTGGAACTC+TGG | + | chr3_4:19582140-19582159 | Msa0493710:CDS | 50.0% | |
| GCCATGAATACCAGAGTTCC+AGG | - | chr3_4:19582153-19582172 | None:intergenic | 50.0% | |
| GGGAGCTAAGAGCTACAATC+TGG | - | chr3_4:19582180-19582199 | None:intergenic | 50.0% | |
| TCACCATAGCCACGAAGATC+AGG | - | chr3_4:19582223-19582242 | None:intergenic | 50.0% | |
| ! | GATGCCATGCATGCTGCTTA+TGG | + | chr3_4:19582466-19582485 | Msa0493710:CDS | 50.0% |
| TGGTTCATACCACAGGAACC+AGG | + | chr3_4:19583587-19583606 | Msa0493710:intron | 50.0% | |
| ACCACAGGAACCAGGCAAAA+TGG | + | chr3_4:19583595-19583614 | Msa0493710:intron | 50.0% | |
| ! | TCCATTTTGCCTGGTTCCTG+TGG | - | chr3_4:19583599-19583618 | None:intergenic | 50.0% |
| GAAGCTGAGATGGCTGAAGT+TGG | + | chr3_4:19583617-19583636 | Msa0493710:CDS | 50.0% | |
| ! | ACCAGTTTTCCGAGCTGTGA+GGG | - | chr3_4:19583666-19583685 | None:intergenic | 50.0% |
| CCAGTTCCATACTCTCCCTT+GGG | - | chr3_4:19583701-19583720 | None:intergenic | 50.0% | |
| ! | CCAAGGGAGAGTATGGAACT+GGG | + | chr3_4:19583699-19583718 | Msa0493710:CDS | 50.0% |
| !! | GTAAGGTGTCAGGAGTATCC+GGG | - | chr3_4:19583730-19583749 | None:intergenic | 50.0% |
| !! | GGTAAGGTGTCAGGAGTATC+CGG | - | chr3_4:19583731-19583750 | None:intergenic | 50.0% |
| GAGAAAACAGGCTTCACTGG+AGG | + | chr3_4:19583797-19583816 | Msa0493710:CDS | 50.0% | |
| ! | TATCCATGGTGGGGGATTCA+AGG | + | chr3_4:19584181-19584200 | Msa0493710:CDS | 50.0% |
| CAAGGAAGATGTGCCCAATC+TGG | + | chr3_4:19584199-19584218 | Msa0493710:CDS | 50.0% | |
| ! | TGTAGTGCGCCACTCCTTTT+TGG | - | chr3_4:19584238-19584257 | None:intergenic | 50.0% |
| GCTCCTGATCTTCGTGGCTA+TGG | + | chr3_4:19582217-19582236 | Msa0493710:CDS | 55.0% | |
| TGTCGGGGCGAAACATGCAA+AGG | - | chr3_4:19582381-19582400 | None:intergenic | 55.0% | |
| AAGGTCCGAGGTTCAAACCC+CGG | - | chr3_4:19582866-19582885 | None:intergenic | 55.0% | |
| ! | GCACCGATCTCTCACGTGAA+AGG | - | chr3_4:19582997-19583016 | None:intergenic | 55.0% |
| ! | GACCAGTTTTCCGAGCTGTG+AGG | - | chr3_4:19583667-19583686 | None:intergenic | 55.0% |
| ! | CCCAAGGGAGAGTATGGAAC+TGG | + | chr3_4:19583698-19583717 | Msa0493710:CDS | 55.0% |
| CCCAGTTCCATACTCTCCCT+TGG | - | chr3_4:19583702-19583721 | None:intergenic | 55.0% | |
| GTATGGAACTGGGTTCGACC+CGG | + | chr3_4:19583709-19583728 | Msa0493710:CDS | 55.0% | |
| CTCCTGACACCTTACCCTCT+TGG | + | chr3_4:19583735-19583754 | Msa0493710:CDS | 55.0% | |
| ! | AGCCAAGAGGGTAAGGTGTC+AGG | - | chr3_4:19583740-19583759 | None:intergenic | 55.0% |
| ATTGGGAGCTGATGGCACCA+TGG | + | chr3_4:19584075-19584094 | Msa0493710:CDS | 55.0% | |
| GAGCTGATGGCACCATGGAA+TGG | + | chr3_4:19584080-19584099 | Msa0493710:CDS | 55.0% | |
| CTTCCTTGAATCCCCCACCA+TGG | - | chr3_4:19584187-19584206 | None:intergenic | 55.0% | |
| GAAGATCAGGAGCCACGGCA+TGG | - | chr3_4:19582210-19582229 | None:intergenic | 60.0% | |
| GCCACGAAGATCAGGAGCCA+CGG | - | chr3_4:19582215-19582234 | None:intergenic | 60.0% | |
| GCCCTCACAGCTCGGAAAAC+TGG | + | chr3_4:19583662-19583681 | Msa0493710:CDS | 60.0% | |
| AGCCACGGCATGGTAGCCGA+GGG | - | chr3_4:19582200-19582219 | None:intergenic | 65.0% | |
| GCCGTGGCTCCTGATCTTCG+TGG | + | chr3_4:19582211-19582230 | Msa0493710:CDS | 65.0% | |
| GGTGGCCGGGGTTTGAACCT+CGG | + | chr3_4:19582858-19582877 | Msa0493710:intron | 65.0% | |
| CTCCCTCGGCTACCATGCCG+TGG | + | chr3_4:19582195-19582214 | Msa0493710:CDS | 70.0% | |
| GAGCCACGGCATGGTAGCCG+AGG | - | chr3_4:19582201-19582220 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 19581802 | 19584694 | 19581802 | ID=Msa0493710;Name=Msa0493710 |
| chr3_4 | mRNA | 19581802 | 19584694 | 19581802 | ID=Msa0493710-mRNA-1;Parent=Msa0493710;Name=Msa0493710-mRNA-1;_AED=0.04;_eAED=0.04;_QI=247|1|1|1|1|1|3|375|319 |
| chr3_4 | exon | 19581802 | 19582516 | 19581802 | ID=Msa0493710-mRNA-1:exon:5255;Parent=Msa0493710-mRNA-1 |
| chr3_4 | exon | 19583602 | 19583846 | 19583602 | ID=Msa0493710-mRNA-1:exon:5256;Parent=Msa0493710-mRNA-1 |
| chr3_4 | exon | 19584073 | 19584694 | 19584073 | ID=Msa0493710-mRNA-1:exon:5257;Parent=Msa0493710-mRNA-1 |
| chr3_4 | five_prime_UTR | 19581802 | 19582048 | 19581802 | ID=Msa0493710-mRNA-1:five_prime_utr;Parent=Msa0493710-mRNA-1 |
| chr3_4 | CDS | 19582049 | 19582516 | 19582049 | ID=Msa0493710-mRNA-1:cds;Parent=Msa0493710-mRNA-1 |
| chr3_4 | CDS | 19583602 | 19583846 | 19583602 | ID=Msa0493710-mRNA-1:cds;Parent=Msa0493710-mRNA-1 |
| chr3_4 | CDS | 19584073 | 19584319 | 19584073 | ID=Msa0493710-mRNA-1:cds;Parent=Msa0493710-mRNA-1 |
| chr3_4 | three_prime_UTR | 19584320 | 19584694 | 19584320 | ID=Msa0493710-mRNA-1:three_prime_utr;Parent=Msa0493710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
