Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1390040 | Q40358.1 | 99.576 | 236 | 1 | 0 | 1 | 236 | 1 | 236 | 1.03e-118 | 348 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1390040 | sp|Q40358|PRP_MEDSA | 99.576 | 236 | 1 | 0 | 1 | 236 | 1 | 236 | 1.29e-121 | 348 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1390040 | A0A072UHK0 | 74.667 | 150 | 33 | 1 | 25 | 174 | 235 | 379 | 6.99e-37 | 142 |
Msa1390040 | A0A072UHK0 | 79.452 | 219 | 35 | 2 | 26 | 234 | 161 | 379 | 1.48e-67 | 222 |
Msa1390040 | A0A072UHK0 | 80.543 | 221 | 33 | 2 | 25 | 235 | 130 | 350 | 7.48e-70 | 228 |
Msa1390040 | A0A072UHK0 | 81.481 | 243 | 35 | 2 | 1 | 233 | 1 | 243 | 5.14e-90 | 280 |
Msa1390040 | A0A072UHK0 | 82.648 | 219 | 28 | 2 | 25 | 233 | 140 | 358 | 1.46e-71 | 232 |
Msa1390040 | A0A072UHK0 | 83.645 | 214 | 30 | 1 | 25 | 233 | 105 | 318 | 2.13e-71 | 232 |
Msa1390040 | A0A072UHK0 | 84.186 | 215 | 29 | 1 | 26 | 235 | 116 | 330 | 1.44e-72 | 235 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0012800 | Msa1390040 | 0.804615 | 1.983746e-49 | -8.615850e-47 |
Msa0012810 | Msa1390040 | 0.803847 | 2.867051e-49 | -8.615850e-47 |
Msa0012820 | Msa1390040 | 0.823514 | 1.329879e-53 | -8.615850e-47 |
Msa0031650 | Msa1390040 | 0.809704 | 1.658570e-50 | -8.615850e-47 |
Msa0033930 | Msa1390040 | -0.804113 | 2.524585e-49 | -8.615850e-47 |
Msa0036580 | Msa1390040 | 0.891063 | 5.588764e-74 | -8.615850e-47 |
Msa0044250 | Msa1390040 | -0.806953 | 6.403602e-50 | -8.615850e-47 |
Msa0048950 | Msa1390040 | 0.806926 | 6.487034e-50 | -8.615850e-47 |
Msa0059880 | Msa1390040 | 0.809659 | 1.696143e-50 | -8.615850e-47 |
Msa0061590 | Msa1390040 | 0.811743 | 6.010674e-51 | -8.615850e-47 |
Msa0061600 | Msa1390040 | 0.840412 | 8.834040e-58 | -8.615850e-47 |
Msa0084390 | Msa1390040 | 0.816875 | 4.414149e-52 | -8.615850e-47 |
Msa0085710 | Msa1390040 | 0.810710 | 1.006545e-50 | -8.615850e-47 |
Msa0087130 | Msa1390040 | -0.802040 | 6.775212e-49 | -8.615850e-47 |
Msa0093530 | Msa1390040 | 0.826355 | 2.838356e-54 | -8.615850e-47 |
Msa0106130 | Msa1390040 | 0.834999 | 2.166256e-56 | -8.615850e-47 |
Msa1349360 | Msa1390040 | -0.800278 | 1.553237e-48 | -8.615850e-47 |
Msa1363690 | Msa1390040 | 0.856904 | 2.346064e-62 | -8.615850e-47 |
Msa1368660 | Msa1390040 | -0.800129 | 1.665610e-48 | -8.615850e-47 |
Msa1370930 | Msa1390040 | 0.866673 | 2.401416e-65 | -8.615850e-47 |
Msa1376070 | Msa1390040 | 0.816627 | 5.016625e-52 | -8.615850e-47 |
Msa1376520 | Msa1390040 | 0.851574 | 8.120934e-61 | -8.615850e-47 |
Msa1377190 | Msa1390040 | 0.803308 | 3.708487e-49 | -8.615850e-47 |
Msa1378950 | Msa1390040 | 0.844338 | 8.043553e-59 | -8.615850e-47 |
Msa1379250 | Msa1390040 | 0.809782 | 1.596313e-50 | -8.615850e-47 |
Msa1382180 | Msa1390040 | 0.812549 | 4.009899e-51 | -8.615850e-47 |
Msa1384980 | Msa1390040 | -0.809607 | 1.740797e-50 | -8.615850e-47 |
Msa1390040 | Msa1393440 | 0.809452 | 1.878794e-50 | -8.615850e-47 |
Msa1390040 | Msa1395580 | -0.829357 | 5.384804e-55 | -8.615850e-47 |
Msa1390040 | Msa1395690 | 0.890165 | 1.260225e-73 | -8.615850e-47 |
Msa1390040 | Msa1396310 | -0.801083 | 1.064551e-48 | -8.615850e-47 |
Msa1390040 | Msa1396550 | 0.868295 | 7.261924e-66 | -8.615850e-47 |
Msa1390040 | Msa1400700 | 0.800729 | 1.257343e-48 | -8.615850e-47 |
Msa1390040 | Msa1407210 | 0.830601 | 2.679776e-55 | -8.615850e-47 |
Msa1390040 | Msa1408190 | -0.822757 | 1.996502e-53 | -8.615850e-47 |
Msa1390040 | Msa1409060 | 0.800988 | 1.112947e-48 | -8.615850e-47 |
Msa1390040 | Msa1410170 | -0.806255 | 8.988832e-50 | -8.615850e-47 |
Msa1390040 | Msa1421120 | 0.804233 | 2.383935e-49 | -8.615850e-47 |
Msa1390040 | Msa1423660 | 0.808816 | 2.572028e-50 | -8.615850e-47 |
Msa1390040 | Msa1425110 | -0.806618 | 7.536345e-50 | -8.615850e-47 |
Msa1390040 | Msa1428990 | -0.801469 | 8.874943e-49 | -8.615850e-47 |
Msa1390040 | Msa1429190 | 0.819951 | 8.870083e-53 | -8.615850e-47 |
Msa1390040 | Msa1435910 | -0.801632 | 8.217048e-49 | -8.615850e-47 |
Msa1390040 | Msa1445780 | 0.830578 | 2.714236e-55 | -8.615850e-47 |
Msa1390040 | Msa1448990 | -0.823587 | 1.278079e-53 | -8.615850e-47 |
Msa1390040 | Msa1451780 | -0.806478 | 8.069287e-50 | -8.615850e-47 |
Msa1390040 | Msa1459630 | -0.801424 | 9.061610e-49 | -8.615850e-47 |
Msa1390040 | Msa1460310 | 0.812259 | 4.638675e-51 | -8.615850e-47 |
Msa1390040 | Msa1463820 | 0.820552 | 6.459143e-53 | -8.615850e-47 |
Msa0618260 | Msa1390040 | -0.809786 | 1.592631e-50 | -8.615850e-47 |
Msa0623750 | Msa1390040 | 0.812630 | 3.849615e-51 | -8.615850e-47 |
Msa0645100 | Msa1390040 | 0.801271 | 9.743577e-49 | -8.615850e-47 |
Msa0645120 | Msa1390040 | 0.831967 | 1.236206e-55 | -8.615850e-47 |
Msa0667640 | Msa1390040 | 0.824683 | 7.066448e-54 | -8.615850e-47 |
Msa0668210 | Msa1390040 | 0.846158 | 2.588996e-59 | -8.615850e-47 |
Msa0668230 | Msa1390040 | 0.802706 | 4.939304e-49 | -8.615850e-47 |
Msa0670220 | Msa1390040 | 0.807563 | 4.754273e-50 | -8.615850e-47 |
Msa0671400 | Msa1390040 | 0.807253 | 5.533096e-50 | -8.615850e-47 |
Msa0672780 | Msa1390040 | 0.991526 | 4.034484e-188 | -8.615850e-47 |
Msa0678620 | Msa1390040 | 0.803037 | 4.220935e-49 | -8.615850e-47 |
Msa0684600 | Msa1390040 | 0.825498 | 4.537280e-54 | -8.615850e-47 |
Msa0711240 | Msa1390040 | 0.825121 | 5.571977e-54 | -8.615850e-47 |
Msa0715260 | Msa1390040 | 0.811337 | 7.361769e-51 | -8.615850e-47 |
Msa0715510 | Msa1390040 | 0.800374 | 1.485430e-48 | -8.615850e-47 |
Msa0716600 | Msa1390040 | 0.852851 | 3.518411e-61 | -8.615850e-47 |
Msa0735340 | Msa1390040 | 0.814428 | 1.548297e-51 | -8.615850e-47 |
Msa0738570 | Msa1390040 | 0.822796 | 1.956055e-53 | -8.615850e-47 |
Msa0738660 | Msa1390040 | 0.803178 | 3.945337e-49 | -8.615850e-47 |
Msa0747500 | Msa1390040 | 0.842144 | 3.093894e-58 | -8.615850e-47 |
Msa0750940 | Msa1390040 | -0.806076 | 9.802955e-50 | -8.615850e-47 |
Msa0757240 | Msa1390040 | 0.808857 | 2.520672e-50 | -8.615850e-47 |
Msa0757990 | Msa1390040 | 0.827337 | 1.653903e-54 | -8.615850e-47 |
Msa0758000 | Msa1390040 | 0.812987 | 3.214865e-51 | -8.615850e-47 |
Msa0758150 | Msa1390040 | 0.830446 | 2.922971e-55 | -8.615850e-47 |
Msa0776340 | Msa1390040 | 0.834032 | 3.789796e-56 | -8.615850e-47 |
Msa0777210 | Msa1390040 | 0.805706 | 1.172735e-49 | -8.615850e-47 |
Msa0783580 | Msa1390040 | 0.831744 | 1.403439e-55 | -8.615850e-47 |
Msa0791300 | Msa1390040 | 0.802610 | 5.169552e-49 | -8.615850e-47 |
Msa0793060 | Msa1390040 | -0.822584 | 2.191276e-53 | -8.615850e-47 |
Msa0794090 | Msa1390040 | 0.819051 | 1.422832e-52 | -8.615850e-47 |
Msa0798230 | Msa1390040 | 0.810005 | 1.429163e-50 | -8.615850e-47 |
Msa0813840 | Msa1390040 | 0.801567 | 8.472676e-49 | -8.615850e-47 |
Msa0814350 | Msa1390040 | 0.816864 | 4.437933e-52 | -8.615850e-47 |
Msa0817100 | Msa1390040 | 0.840512 | 8.314521e-58 | -8.615850e-47 |
Msa0819110 | Msa1390040 | 0.837079 | 6.422502e-57 | -8.615850e-47 |
Msa0824860 | Msa1390040 | 0.800883 | 1.169595e-48 | -8.615850e-47 |
Msa0831320 | Msa1390040 | 0.808383 | 3.182416e-50 | -8.615850e-47 |
Msa0836740 | Msa1390040 | 0.810625 | 1.050265e-50 | -8.615850e-47 |
Msa0841980 | Msa1390040 | -0.802036 | 6.787340e-49 | -8.615850e-47 |
Msa0126960 | Msa1390040 | 0.827691 | 1.360038e-54 | -8.615850e-47 |
Msa0129270 | Msa1390040 | 0.849413 | 3.285826e-60 | -8.615850e-47 |
Msa0130710 | Msa1390040 | 0.800531 | 1.379412e-48 | -8.615850e-47 |
Msa0132250 | Msa1390040 | 0.813626 | 2.327384e-51 | -8.615850e-47 |
Msa0139270 | Msa1390040 | 0.893604 | 5.386854e-75 | -8.615850e-47 |
Msa0148430 | Msa1390040 | -0.802958 | 4.382446e-49 | -8.615850e-47 |
Msa0150910 | Msa1390040 | 0.801119 | 1.046568e-48 | -8.615850e-47 |
Msa0152650 | Msa1390040 | 0.809729 | 1.638674e-50 | -8.615850e-47 |
Msa0164630 | Msa1390040 | -0.810672 | 1.026111e-50 | -8.615850e-47 |
Msa0171740 | Msa1390040 | 0.808998 | 2.351540e-50 | -8.615850e-47 |
Msa0176600 | Msa1390040 | 0.803767 | 2.978529e-49 | -8.615850e-47 |
Msa0176620 | Msa1390040 | 0.896275 | 4.313322e-76 | -8.615850e-47 |
Msa0219810 | Msa1390040 | 0.812629 | 3.851762e-51 | -8.615850e-47 |
Msa0236610 | Msa1390040 | 0.819604 | 1.064602e-52 | -8.615850e-47 |
Msa1226600 | Msa1390040 | -0.802263 | 6.095177e-49 | -8.615850e-47 |
Msa1235760 | Msa1390040 | -0.827332 | 1.658273e-54 | -8.615850e-47 |
Msa1235770 | Msa1390040 | -0.832860 | 7.427350e-56 | -8.615850e-47 |
Msa1259560 | Msa1390040 | 0.803959 | 2.717335e-49 | -8.615850e-47 |
Msa1259570 | Msa1390040 | 0.800054 | 1.725584e-48 | -8.615850e-47 |
Msa1265500 | Msa1390040 | 0.826895 | 2.110516e-54 | -8.615850e-47 |
Msa1266710 | Msa1390040 | 0.831328 | 1.776106e-55 | -8.615850e-47 |
Msa1286950 | Msa1390040 | -0.821539 | 3.826972e-53 | -8.615850e-47 |
Msa1299310 | Msa1390040 | 0.831152 | 1.962837e-55 | -8.615850e-47 |
Msa1302010 | Msa1390040 | 0.810251 | 1.264816e-50 | -8.615850e-47 |
Msa1319230 | Msa1390040 | -0.813954 | 1.970938e-51 | -8.615850e-47 |
Msa1329770 | Msa1390040 | 0.830362 | 3.064523e-55 | -8.615850e-47 |
Msa1335500 | Msa1390040 | 0.843298 | 1.526743e-58 | -8.615850e-47 |
Msa1336100 | Msa1390040 | 0.811681 | 6.199385e-51 | -8.615850e-47 |
Msa1339490 | Msa1390040 | 0.804338 | 2.265857e-49 | -8.615850e-47 |
Msa0365870 | Msa1390040 | -0.801685 | 8.013184e-49 | -8.615850e-47 |
Msa0375430 | Msa1390040 | -0.802564 | 5.284935e-49 | -8.615850e-47 |
Msa0375550 | Msa1390040 | 0.800207 | 1.605796e-48 | -8.615850e-47 |
Msa0389830 | Msa1390040 | -0.802221 | 6.219331e-49 | -8.615850e-47 |
Msa0396970 | Msa1390040 | -0.800480 | 1.413081e-48 | -8.615850e-47 |
Msa0397000 | Msa1390040 | -0.803591 | 3.240592e-49 | -8.615850e-47 |
Msa0424240 | Msa1390040 | 0.837730 | 4.373791e-57 | -8.615850e-47 |
Msa0424300 | Msa1390040 | 0.833801 | 4.328837e-56 | -8.615850e-47 |
Msa0431940 | Msa1390040 | -0.804369 | 2.233362e-49 | -8.615850e-47 |
Msa0432390 | Msa1390040 | -0.804914 | 1.718517e-49 | -8.615850e-47 |
Msa0471210 | Msa1390040 | 0.818990 | 1.469200e-52 | -8.615850e-47 |
Msa0478400 | Msa1390040 | 0.828279 | 9.818361e-55 | -8.615850e-47 |
Msa0985250 | Msa1390040 | 0.877333 | 6.837597e-69 | -8.615850e-47 |
Msa0985260 | Msa1390040 | 0.840622 | 7.781543e-58 | -8.615850e-47 |
Msa0985290 | Msa1390040 | 0.843211 | 1.611307e-58 | -8.615850e-47 |
Msa0985380 | Msa1390040 | 0.801897 | 7.247182e-49 | -8.615850e-47 |
Msa0985700 | Msa1390040 | 0.814733 | 1.325891e-51 | -8.615850e-47 |
Msa0986620 | Msa1390040 | -0.800723 | 1.260833e-48 | -8.615850e-47 |
Msa0987550 | Msa1390040 | 0.876114 | 1.805175e-68 | -8.615850e-47 |
Msa0996940 | Msa1390040 | 0.856117 | 3.995881e-62 | -8.615850e-47 |
Msa0999480 | Msa1390040 | -0.809616 | 1.732348e-50 | -8.615850e-47 |
Msa1003240 | Msa1390040 | 0.807270 | 5.487840e-50 | -8.615850e-47 |
Msa1030430 | Msa1390040 | -0.808644 | 2.798238e-50 | -8.615850e-47 |
Msa1037060 | Msa1390040 | 0.805037 | 1.619372e-49 | -8.615850e-47 |
Msa1040330 | Msa1390040 | 0.819409 | 1.179221e-52 | -8.615850e-47 |
Msa1046220 | Msa1390040 | 0.846356 | 2.286129e-59 | -8.615850e-47 |
Msa1067910 | Msa1390040 | -0.829954 | 3.854150e-55 | -8.615850e-47 |
Msa1076830 | Msa1390040 | 0.811581 | 6.518515e-51 | -8.615850e-47 |
Msa1077940 | Msa1390040 | 0.832406 | 9.625861e-56 | -8.615850e-47 |
Msa1083100 | Msa1390040 | 0.863790 | 1.936072e-64 | -8.615850e-47 |
Msa1087200 | Msa1390040 | 0.824599 | 7.397707e-54 | -8.615850e-47 |
Msa1096280 | Msa1390040 | -0.803621 | 3.194229e-49 | -8.615850e-47 |
Msa0243970 | Msa1390040 | 0.804343 | 2.260658e-49 | -8.615850e-47 |
Msa0243990 | Msa1390040 | 0.812380 | 4.365349e-51 | -8.615850e-47 |
Msa0253410 | Msa1390040 | -0.810235 | 1.274883e-50 | -8.615850e-47 |
Msa0264940 | Msa1390040 | 0.817875 | 2.628158e-52 | -8.615850e-47 |
Msa0266640 | Msa1390040 | 0.855395 | 6.494729e-62 | -8.615850e-47 |
Msa0266650 | Msa1390040 | 0.835725 | 1.419713e-56 | -8.615850e-47 |
Msa0275570 | Msa1390040 | 0.812134 | 4.939631e-51 | -8.615850e-47 |
Msa0278940 | Msa1390040 | 0.808967 | 2.386766e-50 | -8.615850e-47 |
Msa0295520 | Msa1390040 | -0.804829 | 1.790220e-49 | -8.615850e-47 |
Msa0297650 | Msa1390040 | 0.813318 | 2.719820e-51 | -8.615850e-47 |
Msa0301460 | Msa1390040 | -0.803196 | 3.913234e-49 | -8.615850e-47 |
Msa0302990 | Msa1390040 | 0.812171 | 4.848762e-51 | -8.615850e-47 |
Msa0304870 | Msa1390040 | -0.809049 | 2.293071e-50 | -8.615850e-47 |
Msa0315300 | Msa1390040 | 0.813283 | 2.768600e-51 | -8.615850e-47 |
Msa0336640 | Msa1390040 | 0.818379 | 2.021911e-52 | -8.615850e-47 |
Msa0341260 | Msa1390040 | -0.808714 | 2.704481e-50 | -8.615850e-47 |
Msa0356200 | Msa1390040 | 0.808648 | 2.792932e-50 | -8.615850e-47 |
Msa0356250 | Msa1390040 | 0.824912 | 6.240428e-54 | -8.615850e-47 |
Msa1109890 | Msa1390040 | 0.818521 | 1.876812e-52 | -8.615850e-47 |
Msa1126910 | Msa1390040 | -0.801876 | 7.321806e-49 | -8.615850e-47 |
Msa1127940 | Msa1390040 | 0.803575 | 3.265144e-49 | -8.615850e-47 |
Msa1138600 | Msa1390040 | -0.820153 | 7.973307e-53 | -8.615850e-47 |
Msa1156670 | Msa1390040 | 0.800329 | 1.516539e-48 | -8.615850e-47 |
Msa1165860 | Msa1390040 | 0.809652 | 1.702182e-50 | -8.615850e-47 |
Msa1166020 | Msa1390040 | -0.801216 | 9.996773e-49 | -8.615850e-47 |
Msa1166280 | Msa1390040 | -0.804384 | 2.217226e-49 | -8.615850e-47 |
Msa1166520 | Msa1390040 | -0.805983 | 1.025548e-49 | -8.615850e-47 |
Msa1175590 | Msa1390040 | -0.802073 | 6.670273e-49 | -8.615850e-47 |
Msa1178970 | Msa1390040 | -0.816113 | 6.537132e-52 | -8.615850e-47 |
Msa1209790 | Msa1390040 | -0.803766 | 2.979837e-49 | -8.615850e-47 |
Msa1209800 | Msa1390040 | -0.803525 | 3.344578e-49 | -8.615850e-47 |
Msa1211160 | Msa1390040 | 0.832469 | 9.285341e-56 | -8.615850e-47 |
Msa1211320 | Msa1390040 | 0.817214 | 3.704393e-52 | -8.615850e-47 |
Msa1214960 | Msa1390040 | 0.809741 | 1.629174e-50 | -8.615850e-47 |
Msa1219780 | Msa1390040 | 0.838225 | 3.262702e-57 | -8.615850e-47 |
Msa1221170 | Msa1390040 | 0.821696 | 3.518799e-53 | -8.615850e-47 |
Msa1222030 | Msa1390040 | 0.816549 | 5.223034e-52 | -8.615850e-47 |
Msa0491760 | Msa1390040 | 0.803504 | 3.377268e-49 | -8.615850e-47 |
Msa0515930 | Msa1390040 | 0.830616 | 2.657043e-55 | -8.615850e-47 |
Msa0532670 | Msa1390040 | 0.815615 | 8.440627e-52 | -8.615850e-47 |
Msa0532680 | Msa1390040 | 0.813536 | 2.436080e-51 | -8.615850e-47 |
Msa0533510 | Msa1390040 | 0.855000 | 8.460204e-62 | -8.615850e-47 |
Msa0533520 | Msa1390040 | 0.834616 | 2.703685e-56 | -8.615850e-47 |
Msa0538650 | Msa1390040 | 0.922145 | 1.437318e-88 | -8.615850e-47 |
Msa0548760 | Msa1390040 | 0.826564 | 2.532002e-54 | -8.615850e-47 |
Msa0548970 | Msa1390040 | 0.800180 | 1.626102e-48 | -8.615850e-47 |
Msa0581190 | Msa1390040 | -0.807604 | 4.660565e-50 | -8.615850e-47 |
Msa0589450 | Msa1390040 | 0.837343 | 5.496766e-57 | -8.615850e-47 |
Msa0589720 | Msa1390040 | 0.840010 | 1.124425e-57 | -8.615850e-47 |
Msa0589730 | Msa1390040 | 0.815859 | 7.449248e-52 | -8.615850e-47 |
Msa0589740 | Msa1390040 | 0.817956 | 2.519477e-52 | -8.615850e-47 |
Msa0589750 | Msa1390040 | 0.801692 | 7.987706e-49 | -8.615850e-47 |
Msa0594470 | Msa1390040 | 0.841017 | 6.131388e-58 | -8.615850e-47 |
Msa0854380 | Msa1390040 | 0.810070 | 1.384037e-50 | -8.615850e-47 |
Msa0854860 | Msa1390040 | 0.830914 | 2.245532e-55 | -8.615850e-47 |
Msa0859230 | Msa1390040 | 0.827855 | 1.242495e-54 | -8.615850e-47 |
Msa0863840 | Msa1390040 | 0.802126 | 6.502770e-49 | -8.615850e-47 |
Msa0883610 | Msa1390040 | 0.852512 | 4.398588e-61 | -8.615850e-47 |
Msa0883640 | Msa1390040 | 0.812813 | 3.510631e-51 | -8.615850e-47 |
Msa0886370 | Msa1390040 | 0.868142 | 8.132161e-66 | -8.615850e-47 |
Msa0896920 | Msa1390040 | 0.806401 | 8.373694e-50 | -8.615850e-47 |
Msa0896990 | Msa1390040 | 0.843450 | 1.390906e-58 | -8.615850e-47 |
Msa0902340 | Msa1390040 | 0.814865 | 1.239162e-51 | -8.615850e-47 |
Msa0910570 | Msa1390040 | 0.837709 | 4.429308e-57 | -8.615850e-47 |
Msa0910590 | Msa1390040 | 0.863606 | 2.207536e-64 | -8.615850e-47 |
Msa0910830 | Msa1390040 | 0.810240 | 1.271515e-50 | -8.615850e-47 |
Msa0913500 | Msa1390040 | 0.847168 | 1.371393e-59 | -8.615850e-47 |
Msa0932930 | Msa1390040 | 0.820446 | 6.830568e-53 | -8.615850e-47 |
Msa0948430 | Msa1390040 | 0.856679 | 2.733064e-62 | -8.615850e-47 |
Msa0948460 | Msa1390040 | 0.810946 | 8.950216e-51 | -8.615850e-47 |
Msa0951060 | Msa1390040 | 0.901089 | 3.809252e-78 | -8.615850e-47 |
Msa0960090 | Msa1390040 | 0.813864 | 2.062641e-51 | -8.615850e-47 |
Msa0962260 | Msa1390040 | 0.829764 | 4.289478e-55 | -8.615850e-47 |
Msa0967450 | Msa1390040 | -0.810536 | 1.098079e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1390040 | MtrunA17_Chr4g0013401 | 77.239 | 268 | 26 | 5 | 1 | 233 | 1 | 268 | 2.37e-90 | 273 |
Msa1390040 | MtrunA17_Chr4g0013401 | 88.073 | 218 | 16 | 2 | 26 | 233 | 116 | 333 | 4.32e-80 | 246 |
Msa1390040 | MtrunA17_Chr4g0013401 | 83.628 | 226 | 22 | 1 | 25 | 235 | 140 | 365 | 1.91e-77 | 239 |
Msa1390040 | MtrunA17_Chr4g0013401 | 86.603 | 209 | 28 | 0 | 25 | 233 | 105 | 313 | 3.06e-76 | 236 |
Msa1390040 | MtrunA17_Chr4g0013401 | 85.116 | 215 | 27 | 1 | 26 | 235 | 171 | 385 | 3.30e-76 | 236 |
Msa1390040 | MtrunA17_Chr4g0013401 | 85.915 | 213 | 25 | 1 | 26 | 233 | 161 | 373 | 8.66e-75 | 233 |
Msa1390040 | MtrunA17_Chr4g0013401 | 83.929 | 224 | 21 | 3 | 25 | 233 | 130 | 353 | 1.84e-74 | 232 |
Msa1390040 | MtrunA17_Chr4g0013401 | 82.326 | 215 | 33 | 1 | 26 | 235 | 211 | 425 | 1.49e-72 | 227 |
Msa1390040 | MtrunA17_Chr4g0013401 | 83.568 | 213 | 30 | 1 | 26 | 233 | 201 | 413 | 3.50e-72 | 226 |
Msa1390040 | MtrunA17_Chr4g0013401 | 81.776 | 214 | 34 | 1 | 26 | 234 | 221 | 434 | 6.68e-72 | 225 |
Msa1390040 | MtrunA17_Chr4g0013401 | 80.500 | 200 | 39 | 0 | 25 | 224 | 235 | 434 | 5.53e-65 | 207 |
Msa1390040 | MtrunA17_Chr4g0013371 | 81.203 | 266 | 17 | 1 | 1 | 233 | 1 | 266 | 6.29e-88 | 262 |
Msa1390040 | MtrunA17_Chr4g0013371 | 91.667 | 216 | 13 | 1 | 26 | 236 | 84 | 299 | 8.07e-87 | 259 |
Msa1390040 | MtrunA17_Chr4g0013371 | 81.818 | 66 | 7 | 1 | 25 | 90 | 238 | 298 | 4.10e-14 | 70.1 |
Msa1390040 | MtrunA17_Chr4g0013411 | 70.992 | 262 | 46 | 2 | 1 | 232 | 1 | 262 | 9.40e-81 | 251 |
Msa1390040 | MtrunA17_Chr4g0013411 | 76.959 | 217 | 45 | 1 | 24 | 235 | 269 | 485 | 2.21e-67 | 217 |
Msa1390040 | MtrunA17_Chr4g0013411 | 75.664 | 226 | 40 | 3 | 25 | 235 | 220 | 445 | 8.70e-67 | 215 |
Msa1390040 | MtrunA17_Chr4g0013411 | 75.926 | 216 | 47 | 1 | 23 | 233 | 253 | 468 | 1.61e-66 | 214 |
Msa1390040 | MtrunA17_Chr4g0013411 | 77.626 | 219 | 39 | 2 | 25 | 233 | 180 | 398 | 2.83e-66 | 214 |
Msa1390040 | MtrunA17_Chr4g0013411 | 77.315 | 216 | 44 | 1 | 25 | 235 | 110 | 325 | 4.10e-66 | 213 |
Msa1390040 | MtrunA17_Chr4g0013411 | 76.744 | 215 | 45 | 1 | 24 | 233 | 324 | 538 | 4.37e-66 | 213 |
Msa1390040 | MtrunA17_Chr4g0013411 | 76.852 | 216 | 45 | 1 | 23 | 233 | 213 | 428 | 4.96e-66 | 213 |
Msa1390040 | MtrunA17_Chr4g0013411 | 76.712 | 219 | 41 | 2 | 25 | 233 | 190 | 408 | 5.70e-66 | 213 |
Msa1390040 | MtrunA17_Chr4g0013411 | 77.103 | 214 | 44 | 1 | 25 | 233 | 295 | 508 | 6.54e-66 | 213 |
Msa1390040 | MtrunA17_Chr4g0013411 | 78.365 | 208 | 45 | 0 | 25 | 232 | 240 | 447 | 1.11e-65 | 212 |
Msa1390040 | MtrunA17_Chr4g0013411 | 76.636 | 214 | 45 | 1 | 25 | 233 | 335 | 548 | 1.14e-65 | 212 |
Msa1390040 | MtrunA17_Chr4g0013411 | 76.852 | 216 | 45 | 1 | 23 | 233 | 93 | 308 | 1.79e-65 | 212 |
Msa1390040 | MtrunA17_Chr4g0013411 | 76.712 | 219 | 41 | 2 | 25 | 233 | 130 | 348 | 1.32e-64 | 209 |
Msa1390040 | MtrunA17_Chr4g0013411 | 73.820 | 233 | 41 | 4 | 23 | 235 | 153 | 385 | 1.34e-64 | 209 |
Msa1390040 | MtrunA17_Chr4g0013411 | 76.256 | 219 | 42 | 2 | 25 | 233 | 140 | 358 | 3.17e-64 | 208 |
Msa1390040 | MtrunA17_Chr4g0013411 | 75.377 | 199 | 44 | 1 | 26 | 224 | 356 | 549 | 5.33e-58 | 192 |
Msa1390040 | MtrunA17_Chr4g0013411 | 75.000 | 176 | 39 | 1 | 24 | 194 | 374 | 549 | 1.29e-50 | 172 |
Msa1390040 | MtrunA17_Chr4g0013411 | 71.304 | 115 | 33 | 0 | 121 | 235 | 26 | 140 | 7.39e-27 | 107 |
Msa1390040 | MtrunA17_Chr4g0013411 | 61.458 | 96 | 32 | 1 | 9 | 104 | 459 | 549 | 4.29e-16 | 77.0 |
Msa1390040 | MtrunA17_Chr4g0013441 | 78.571 | 210 | 45 | 0 | 24 | 233 | 261 | 470 | 1.26e-68 | 218 |
Msa1390040 | MtrunA17_Chr4g0013441 | 70.539 | 241 | 49 | 4 | 15 | 233 | 15 | 255 | 2.36e-66 | 212 |
Msa1390040 | MtrunA17_Chr4g0013441 | 77.033 | 209 | 43 | 1 | 25 | 233 | 277 | 480 | 1.18e-64 | 208 |
Msa1390040 | MtrunA17_Chr4g0013441 | 73.778 | 225 | 47 | 3 | 23 | 235 | 193 | 417 | 5.37e-64 | 206 |
Msa1390040 | MtrunA17_Chr4g0013441 | 65.263 | 95 | 28 | 1 | 9 | 103 | 391 | 480 | 6.90e-18 | 82.0 |
Msa1390040 | MtrunA17_Chr4g0013391 | 65.990 | 197 | 15 | 1 | 1 | 145 | 1 | 197 | 2.21e-41 | 140 |
Msa1390040 | MtrunA17_Chr4g0013391 | 66.474 | 173 | 6 | 1 | 116 | 236 | 26 | 198 | 5.98e-40 | 136 |
Msa1390040 | MtrunA17_Chr6g0452831 | 43.396 | 159 | 90 | 0 | 38 | 196 | 69 | 227 | 2.59e-33 | 120 |
Msa1390040 | MtrunA17_Chr6g0452831 | 43.396 | 159 | 90 | 0 | 48 | 206 | 69 | 227 | 4.41e-33 | 120 |
Msa1390040 | MtrunA17_Chr6g0452831 | 42.331 | 163 | 92 | 1 | 24 | 186 | 67 | 227 | 1.04e-32 | 119 |
Msa1390040 | MtrunA17_Chr6g0452831 | 43.396 | 159 | 90 | 0 | 63 | 221 | 69 | 227 | 2.83e-32 | 118 |
Msa1390040 | MtrunA17_Chr6g0452831 | 43.871 | 155 | 87 | 0 | 37 | 191 | 73 | 227 | 7.69e-32 | 117 |
Msa1390040 | MtrunA17_Chr6g0452831 | 43.871 | 155 | 87 | 0 | 62 | 216 | 73 | 227 | 1.24e-31 | 116 |
Msa1390040 | MtrunA17_Chr6g0452831 | 43.871 | 155 | 87 | 0 | 72 | 226 | 73 | 227 | 1.44e-31 | 116 |
Msa1390040 | MtrunA17_Chr6g0452831 | 44.156 | 154 | 86 | 0 | 77 | 230 | 73 | 226 | 1.74e-31 | 115 |
Msa1390040 | MtrunA17_Chr6g0452831 | 43.871 | 155 | 87 | 0 | 57 | 211 | 73 | 227 | 1.98e-31 | 115 |
Msa1390040 | MtrunA17_Chr6g0452831 | 43.506 | 154 | 87 | 0 | 82 | 235 | 73 | 226 | 2.40e-31 | 115 |
Msa1390040 | MtrunA17_Chr6g0452831 | 42.138 | 159 | 92 | 0 | 23 | 181 | 69 | 227 | 2.55e-31 | 115 |
Msa1390040 | MtrunA17_Chr6g0452831 | 43.871 | 155 | 87 | 0 | 47 | 201 | 73 | 227 | 1.48e-30 | 113 |
Msa1390040 | MtrunA17_Chr6g0452831 | 43.357 | 143 | 81 | 0 | 93 | 235 | 69 | 211 | 6.07e-28 | 106 |
Msa1390040 | MtrunA17_Chr4g0013431 | 63.780 | 127 | 38 | 2 | 1 | 124 | 1 | 122 | 1.89e-30 | 109 |
Msa1390040 | MtrunA17_Chr4g0013431 | 56.701 | 97 | 24 | 1 | 146 | 224 | 26 | 122 | 1.73e-15 | 70.5 |
Msa1390040 | MtrunA17_Chr4g0013431 | 60.825 | 97 | 25 | 1 | 121 | 204 | 26 | 122 | 3.03e-15 | 69.7 |
Msa1390040 | MtrunA17_Chr4g0013431 | 63.265 | 98 | 28 | 1 | 95 | 184 | 25 | 122 | 9.99e-15 | 68.6 |
Msa1390040 | MtrunA17_Chr4g0013431 | 59.794 | 97 | 26 | 1 | 111 | 194 | 26 | 122 | 1.82e-14 | 67.8 |
Msa1390040 | MtrunA17_Chr4g0013431 | 56.701 | 97 | 24 | 1 | 155 | 233 | 25 | 121 | 6.18e-14 | 66.2 |
Msa1390040 | MtrunA17_Chr4g0013541 | 47.321 | 112 | 50 | 3 | 1 | 112 | 1 | 103 | 3.66e-17 | 74.7 |
Msa1390040 | MtrunA17_Chr3g0082981 | 49.474 | 95 | 46 | 1 | 1 | 93 | 13 | 107 | 2.37e-15 | 70.1 |
Msa1390040 | MtrunA17_Chr4g0013551 | 43.519 | 108 | 40 | 4 | 1 | 99 | 1 | 96 | 1.26e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1390040 | AT3G22142.1 | 51.244 | 201 | 98 | 0 | 24 | 224 | 1101 | 1301 | 1.50e-49 | 174 |
Msa1390040 | AT3G22142.1 | 50.244 | 205 | 102 | 0 | 25 | 229 | 1097 | 1301 | 4.82e-49 | 172 |
Msa1390040 | AT3G22142.1 | 50.754 | 199 | 98 | 0 | 33 | 231 | 1100 | 1298 | 6.97e-48 | 169 |
Msa1390040 | AT3G22142.1 | 47.368 | 228 | 104 | 1 | 24 | 235 | 1065 | 1292 | 1.24e-47 | 168 |
Msa1390040 | AT3G22142.1 | 50.754 | 199 | 98 | 0 | 35 | 233 | 1097 | 1295 | 1.72e-47 | 168 |
Msa1390040 | AT3G22142.1 | 48.661 | 224 | 99 | 1 | 29 | 236 | 1050 | 1273 | 2.03e-47 | 168 |
Msa1390040 | AT3G22142.1 | 46.215 | 251 | 94 | 2 | 24 | 233 | 995 | 1245 | 2.24e-47 | 168 |
Msa1390040 | AT3G22142.1 | 46.983 | 232 | 103 | 1 | 24 | 235 | 1161 | 1392 | 3.69e-47 | 167 |
Msa1390040 | AT3G22142.1 | 46.983 | 232 | 103 | 1 | 24 | 235 | 1126 | 1357 | 2.26e-46 | 165 |
Msa1390040 | AT3G22142.1 | 44.961 | 258 | 99 | 3 | 21 | 235 | 1005 | 1262 | 3.66e-46 | 164 |
Msa1390040 | AT3G22142.1 | 46.552 | 232 | 104 | 1 | 24 | 235 | 1136 | 1367 | 4.48e-46 | 164 |
Msa1390040 | AT3G22142.1 | 45.690 | 232 | 106 | 1 | 24 | 235 | 1111 | 1342 | 6.04e-46 | 164 |
Msa1390040 | AT3G22142.1 | 46.552 | 232 | 104 | 1 | 24 | 235 | 1151 | 1382 | 1.98e-45 | 162 |
Msa1390040 | AT3G22142.1 | 46.352 | 233 | 103 | 2 | 21 | 231 | 1141 | 1373 | 2.47e-45 | 162 |
Msa1390040 | AT3G22142.1 | 46.473 | 241 | 98 | 2 | 24 | 233 | 985 | 1225 | 5.87e-45 | 160 |
Msa1390040 | AT3G22142.1 | 47.032 | 219 | 101 | 1 | 24 | 227 | 1176 | 1394 | 9.49e-42 | 151 |
Msa1390040 | AT3G22142.1 | 42.537 | 268 | 98 | 3 | 24 | 235 | 880 | 1147 | 3.67e-39 | 144 |
Msa1390040 | AT3G22142.1 | 40.794 | 277 | 98 | 3 | 25 | 235 | 916 | 1192 | 9.25e-39 | 143 |
Msa1390040 | AT3G22142.1 | 51.196 | 209 | 102 | 0 | 24 | 232 | 1186 | 1394 | 1.32e-38 | 142 |
Msa1390040 | AT3G22142.1 | 40.000 | 275 | 100 | 3 | 26 | 235 | 572 | 846 | 6.91e-38 | 140 |
Msa1390040 | AT3G22142.1 | 40.659 | 273 | 101 | 3 | 24 | 235 | 890 | 1162 | 2.48e-37 | 139 |
Msa1390040 | AT3G22142.1 | 39.781 | 274 | 100 | 3 | 27 | 235 | 508 | 781 | 3.68e-37 | 138 |
Msa1390040 | AT3G22142.1 | 39.855 | 276 | 101 | 3 | 25 | 235 | 666 | 941 | 1.11e-36 | 137 |
Msa1390040 | AT3G22142.1 | 42.802 | 257 | 96 | 3 | 27 | 232 | 908 | 1164 | 1.70e-36 | 136 |
Msa1390040 | AT3G22142.1 | 45.495 | 222 | 101 | 1 | 24 | 225 | 625 | 846 | 2.52e-36 | 136 |
Msa1390040 | AT3G22142.1 | 38.971 | 272 | 101 | 3 | 24 | 230 | 510 | 781 | 4.00e-36 | 135 |
Msa1390040 | AT3G22142.1 | 38.909 | 275 | 103 | 3 | 26 | 235 | 517 | 791 | 4.53e-36 | 135 |
Msa1390040 | AT3G22142.1 | 40.221 | 271 | 102 | 3 | 25 | 235 | 501 | 771 | 4.80e-36 | 135 |
Msa1390040 | AT3G22142.1 | 39.416 | 274 | 101 | 3 | 27 | 235 | 673 | 946 | 5.23e-36 | 135 |
Msa1390040 | AT3G22142.1 | 40.074 | 272 | 103 | 3 | 24 | 235 | 530 | 801 | 9.40e-36 | 134 |
Msa1390040 | AT3G22142.1 | 38.909 | 275 | 103 | 3 | 24 | 233 | 520 | 794 | 9.59e-36 | 134 |
Msa1390040 | AT3G22142.1 | 38.909 | 275 | 103 | 3 | 24 | 233 | 640 | 914 | 1.15e-35 | 134 |
Msa1390040 | AT3G22142.1 | 37.906 | 277 | 107 | 3 | 24 | 235 | 685 | 961 | 4.29e-35 | 132 |
Msa1390040 | AT3G22142.1 | 38.929 | 280 | 101 | 3 | 24 | 233 | 630 | 909 | 5.41e-35 | 132 |
Msa1390040 | AT3G22142.1 | 43.902 | 246 | 92 | 3 | 34 | 233 | 875 | 1120 | 5.41e-35 | 132 |
Msa1390040 | AT3G22142.1 | 38.462 | 273 | 103 | 3 | 24 | 231 | 675 | 947 | 7.28e-35 | 132 |
Msa1390040 | AT3G22142.1 | 37.979 | 287 | 103 | 3 | 24 | 235 | 735 | 1021 | 1.05e-34 | 131 |
Msa1390040 | AT3G22142.1 | 37.979 | 287 | 103 | 3 | 24 | 235 | 745 | 1031 | 2.04e-34 | 130 |
Msa1390040 | AT3G22142.1 | 38.710 | 279 | 101 | 3 | 27 | 235 | 758 | 1036 | 3.05e-34 | 130 |
Msa1390040 | AT3G22142.1 | 42.692 | 260 | 94 | 3 | 26 | 230 | 822 | 1081 | 1.03e-33 | 128 |
Msa1390040 | AT3G22142.1 | 38.519 | 270 | 91 | 3 | 36 | 230 | 452 | 721 | 2.18e-33 | 127 |
Msa1390040 | AT3G22142.1 | 37.868 | 272 | 104 | 3 | 24 | 230 | 695 | 966 | 5.08e-33 | 126 |
Msa1390040 | AT3G22142.1 | 35.762 | 302 | 104 | 4 | 24 | 235 | 455 | 756 | 6.78e-33 | 126 |
Msa1390040 | AT3G22142.1 | 36.688 | 308 | 99 | 5 | 24 | 235 | 830 | 1137 | 2.68e-32 | 124 |
Msa1390040 | AT3G22142.1 | 41.538 | 260 | 92 | 3 | 36 | 235 | 822 | 1081 | 5.04e-32 | 124 |
Msa1390040 | AT3G22142.1 | 37.710 | 297 | 100 | 4 | 24 | 235 | 415 | 711 | 5.19e-32 | 124 |
Msa1390040 | AT3G22142.1 | 37.209 | 301 | 99 | 4 | 25 | 235 | 401 | 701 | 8.55e-32 | 123 |
Msa1390040 | AT3G22142.1 | 38.745 | 271 | 104 | 4 | 25 | 235 | 328 | 596 | 2.53e-31 | 121 |
Msa1390040 | AT3G22142.1 | 34.385 | 317 | 103 | 4 | 24 | 235 | 375 | 691 | 2.75e-29 | 115 |
Msa1390040 | AT3G22142.1 | 33.548 | 310 | 106 | 4 | 24 | 233 | 350 | 659 | 4.43e-28 | 112 |
Msa1390040 | AT3G22142.1 | 34.194 | 310 | 104 | 5 | 24 | 233 | 355 | 664 | 4.74e-28 | 112 |
Msa1390040 | AT3G22142.1 | 33.333 | 288 | 108 | 7 | 29 | 235 | 247 | 531 | 5.75e-22 | 94.7 |
Msa1390040 | AT3G22142.1 | 38.528 | 231 | 104 | 3 | 34 | 226 | 202 | 432 | 1.02e-20 | 91.3 |
Msa1390040 | AT3G22142.1 | 41.256 | 223 | 112 | 4 | 29 | 235 | 202 | 421 | 5.78e-16 | 77.4 |
Msa1390040 | AT1G54970.1 | 45.918 | 196 | 81 | 9 | 1 | 189 | 3 | 180 | 7.46e-22 | 92.4 |
Msa1390040 | AT1G54970.1 | 53.548 | 155 | 62 | 7 | 86 | 236 | 29 | 177 | 1.70e-19 | 85.9 |
Find 92 sgRNAs with CRISPR-Local
Find 111 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAGACTGGAGGTTTCTCAAC+TGG | 0.297152 | tig0021307:-95179 | None:intergenic |
AACCGGAGGCTTGTCATAAT+TGG | 0.298691 | tig0021307:-94622 | None:intergenic |
GTCGAGAAGCCACCAGTTTA+CGG | 0.299440 | tig0021307:+95227 | Msa1390040:CDS |
TGCTCTCTTTGTCATCCCTC+AGG | 0.337569 | tig0021307:+94593 | Msa1390040:CDS |
ACTACTGGTGGCTTGTAAAC+TGG | 0.353333 | tig0021307:-94879 | None:intergenic |
TACACTGGTGGTTGGTAAAC+CGG | 0.382977 | tig0021307:-94639 | None:intergenic |
ACTACTGGTGGCTTGTAAAC+TGG | 0.391650 | tig0021307:-95059 | None:intergenic |
TCAACTGGTGGCTTGTAGAC+TGG | 0.401548 | tig0021307:-94924 | None:intergenic |
TCAACTGGTGGCTTGTAAAC+AGG | 0.402499 | tig0021307:-94999 | None:intergenic |
TACACAGGTGGCTTCTCTAC+AGG | 0.405035 | tig0021307:-94699 | None:intergenic |
CTCAACTGGAGGCTTGTAAA+CGG | 0.405571 | tig0021307:-95120 | None:intergenic |
TCAACTGGTGGCTTATACAC+TGG | 0.412257 | tig0021307:-94654 | None:intergenic |
TAAACAGGAGGTTTGTAAAC+CGG | 0.417330 | tig0021307:-94789 | None:intergenic |
TACACCGGTGGCTTGTAAAC+AGG | 0.419007 | tig0021307:-94804 | None:intergenic |
TAGACTGGAGGCTTCTCAAC+TGG | 0.423306 | tig0021307:-95134 | None:intergenic |
AGACTGGAGGTTTCTCAACT+GGG | 0.425047 | tig0021307:-95178 | None:intergenic |
TGGTGAGGAGGTCCGTAAAC+TGG | 0.427954 | tig0021307:-95239 | None:intergenic |
TAAACAGGAGGCTTGTAAAC+AGG | 0.429228 | tig0021307:-94984 | None:intergenic |
TAAACTGGTGGCTTCTCGAC+TGG | 0.430061 | tig0021307:-95224 | None:intergenic |
TAGACTGGAGGCTTCTCAAC+TGG | 0.434291 | tig0021307:-94939 | None:intergenic |
TCGACTGGAGGCTTGTAAAC+TGG | 0.436990 | tig0021307:-95209 | None:intergenic |
TACACCGGAGGCTTGTAAAC+AGG | 0.441057 | tig0021307:-95029 | None:intergenic |
TAAACTGGTGGCTTGTAGAC+TGG | 0.441265 | tig0021307:-95194 | None:intergenic |
TAAACGGGTGGCTTGTAGAC+TGG | 0.441414 | tig0021307:-95104 | None:intergenic |
TAAACAGGTGGCTTGTAGAC+TGG | 0.443434 | tig0021307:-95149 | None:intergenic |
TATACCGGAGGCTTGTAAAC+AGG | 0.449409 | tig0021307:-94849 | None:intergenic |
TAAACAGGAGGCTTCTCAAC+TGG | 0.459812 | tig0021307:-94834 | None:intergenic |
TAAACAGGAGGCTTCTCAAC+TGG | 0.459812 | tig0021307:-95014 | None:intergenic |
TCAACTGGTGGCTTGTACAC+CGG | 0.460751 | tig0021307:-94819 | None:intergenic |
TACACCGGTGGCTTGTAGAC+TGG | 0.463097 | tig0021307:-94954 | None:intergenic |
TATACAGGTGGCTTCACTAC+TGG | 0.464722 | tig0021307:-94894 | None:intergenic |
GCTCTCTTTGTCATCCCTCA+GGG | 0.466378 | tig0021307:+94594 | Msa1390040:CDS |
TAGACTGGAGGCTTGTATAC+AGG | 0.470954 | tig0021307:-94909 | None:intergenic |
TAGACTGGAGGCTTGTATAC+AGG | 0.470954 | tig0021307:-95089 | None:intergenic |
TCAACTGGAGGCTTGTAAAC+GGG | 0.476504 | tig0021307:-95119 | None:intergenic |
TAAACTGGTGGCTTGTACAC+CGG | 0.484891 | tig0021307:-95044 | None:intergenic |
GCCTCCTGTTTACAAGCCTC+CGG | 0.502841 | tig0021307:+95025 | Msa1390040:CDS |
GCCTCCTGTTTACAAGCCTC+CGG | 0.504860 | tig0021307:+94845 | Msa1390040:CDS |
AAACAGGAGGTTTGTAAACC+GGG | 0.508037 | tig0021307:-94788 | None:intergenic |
TATACAGGTGGCTTAACTAC+TGG | 0.513910 | tig0021307:-95074 | None:intergenic |
TACACAGGTGGCTTATACAC+AGG | 0.513962 | tig0021307:-94714 | None:intergenic |
TGCCAATTATGACAAGCCTC+CGG | 0.514734 | tig0021307:+94620 | Msa1390040:CDS |
AAGCAGCACAAGGAAGTTTG+AGG | 0.519715 | tig0021307:-94565 | None:intergenic |
TAAACTGGAGGCTTGTATAC+CGG | 0.526226 | tig0021307:-94864 | None:intergenic |
TAAACAGGAGGCTTGTACAC+CGG | 0.529016 | tig0021307:-94969 | None:intergenic |
GACTGGAGGTTTCTCAACTG+GGG | 0.534766 | tig0021307:-95177 | None:intergenic |
ACACAGGTGGCTTCTCTACA+GGG | 0.554240 | tig0021307:-94698 | None:intergenic |
GGGAACTATGGGTGGTGAGG+AGG | 0.563963 | tig0021307:-95251 | None:intergenic |
ACTGGAGGTTTCTCAACTGG+GGG | 0.581297 | tig0021307:-95176 | None:intergenic |
CGAGGGAACTATGGGTGGTG+AGG | 0.583741 | tig0021307:-95254 | None:intergenic |
ACCTCCTGTTTACAAGCCAC+CGG | 0.585895 | tig0021307:+94800 | Msa1390040:CDS |
GCCTCCAGTCTACAAGCCAC+CGG | 0.597241 | tig0021307:+94950 | Msa1390040:CDS |
ACTGGAGGCTTCTCAACTGG+TGG | 0.597757 | tig0021307:-94936 | None:intergenic |
ACAGGTGGCTTCACTACTGG+TGG | 0.613745 | tig0021307:-94891 | None:intergenic |
ACTGGTGGCTTCTCGACTGG+AGG | 0.616423 | tig0021307:-95221 | None:intergenic |
AACAGGAGGTTTGTAAACCG+GGG | 0.616438 | tig0021307:-94787 | None:intergenic |
ACTGGTGGCTTGTAGACTGG+AGG | 0.619678 | tig0021307:-94921 | None:intergenic |
ACTGGAGGCTTGTAAACTGG+TGG | 0.629358 | tig0021307:-95206 | None:intergenic |
GCCACCTGTGTACAAGCCCC+CGG | 0.630519 | tig0021307:+94725 | Msa1390040:CDS |
ACTGGTGGCTTATACACTGG+TGG | 0.631560 | tig0021307:-94651 | None:intergenic |
TCATAATTGGCAAGACCCTG+AGG | 0.637663 | tig0021307:-94609 | None:intergenic |
ACCGGTGGCTTGTAAACAGG+AGG | 0.639427 | tig0021307:-94801 | None:intergenic |
TGAGGAGGTCCGTAAACTGG+TGG | 0.639666 | tig0021307:-95236 | None:intergenic |
ACAGGAGGCTTCTCAACTGG+TGG | 0.640818 | tig0021307:-94831 | None:intergenic |
ACAGGAGGCTTCTCAACTGG+TGG | 0.640818 | tig0021307:-95011 | None:intergenic |
ACCGGAGGCTTGTAAACAGG+AGG | 0.642069 | tig0021307:-94846 | None:intergenic |
CATAATTGGCAAGACCCTGA+GGG | 0.642655 | tig0021307:-94608 | None:intergenic |
ACAGGTGGCTTCTCTACAGG+GGG | 0.643712 | tig0021307:-94696 | None:intergenic |
ACCGGTGGCTTGTAGACTGG+AGG | 0.645740 | tig0021307:-94951 | None:intergenic |
ACTGGTGGCTTGTACACCGG+TGG | 0.645745 | tig0021307:-94816 | None:intergenic |
ACTGGAGGCTTCTCAACTGG+AGG | 0.646341 | tig0021307:-95131 | None:intergenic |
ACCGGAGGCTTGTAAACAGG+AGG | 0.649300 | tig0021307:-95026 | None:intergenic |
ACTGGAGGCTTGTAAACGGG+TGG | 0.650242 | tig0021307:-95116 | None:intergenic |
GTGGCTTATACACTGGTGGT+TGG | 0.651466 | tig0021307:-94647 | None:intergenic |
ACTGGTGGCTTGTAGACTGG+AGG | 0.655799 | tig0021307:-95191 | None:intergenic |
ACAGGAGGCTTGTAAACAGG+AGG | 0.656540 | tig0021307:-94981 | None:intergenic |
CTACCCGAGGGAACTATGGG+TGG | 0.657162 | tig0021307:-95259 | None:intergenic |
CACAGGTGGCTTCTCTACAG+GGG | 0.659499 | tig0021307:-94697 | None:intergenic |
ACTGGAGGCTTGTATACAGG+TGG | 0.663475 | tig0021307:-94906 | None:intergenic |
ACTGGAGGCTTGTATACAGG+TGG | 0.663475 | tig0021307:-95086 | None:intergenic |
ACAGGTGGCTTAACTACTGG+TGG | 0.665885 | tig0021307:-95071 | None:intergenic |
ACAGGAGGTTTGTAAACCGG+GGG | 0.670551 | tig0021307:-94786 | None:intergenic |
ACTGGTGGCTTGTAAACAGG+AGG | 0.672730 | tig0021307:-94996 | None:intergenic |
ACTGGAGGCTTGTATACCGG+AGG | 0.673497 | tig0021307:-94861 | None:intergenic |
ACGGGTGGCTTGTAGACTGG+AGG | 0.678574 | tig0021307:-95101 | None:intergenic |
ACTGGTGGCTTGTAAACTGG+TGG | 0.678967 | tig0021307:-95056 | None:intergenic |
ACAGGAGGCTTGTACACCGG+TGG | 0.679752 | tig0021307:-94966 | None:intergenic |
ACTGGTGGCTTGTAAACTGG+AGG | 0.680586 | tig0021307:-94876 | None:intergenic |
ACAGGTGGCTTGTAGACTGG+AGG | 0.680593 | tig0021307:-95146 | None:intergenic |
ACTGGTGGCTTGTACACCGG+AGG | 0.694758 | tig0021307:-95041 | None:intergenic |
ACAGGTGGCTTATACACAGG+TGG | 0.704202 | tig0021307:-94711 | None:intergenic |
ACTGGTGGTTGGTAAACCGG+AGG | 0.711189 | tig0021307:-94636 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
TAAACAGGAGGTTTGTAAAC+CGG | - | tig0021307:94792-94811 | None:intergenic | 35.0% | |
AAACAGGAGGTTTGTAAACC+GGG | - | tig0021307:94791-94810 | None:intergenic | 40.0% | |
TAAACTGGAGGCTTGTATAC+CGG | - | tig0021307:94867-94886 | None:intergenic | 40.0% | |
TAAACAGGAGGCTTGTAAAC+AGG | - | tig0021307:94987-95006 | None:intergenic | 40.0% | |
TATACAGGTGGCTTAACTAC+TGG | - | tig0021307:95077-95096 | None:intergenic | 40.0% | |
AAGCAGCACAAGGAAGTTTG+AGG | - | tig0021307:94568-94587 | None:intergenic | 45.0% | |
GAGCAAAAAGAAGCAGCACA+AGG | - | tig0021307:94578-94597 | None:intergenic | 45.0% | |
CATAATTGGCAAGACCCTGA+GGG | - | tig0021307:94611-94630 | None:intergenic | 45.0% | |
TCATAATTGGCAAGACCCTG+AGG | - | tig0021307:94612-94631 | None:intergenic | 45.0% | |
TGCCAATTATGACAAGCCTC+CGG | + | tig0021307:94620-94639 | Msa1390040:CDS | 45.0% | |
AACCGGAGGCTTGTCATAAT+TGG | - | tig0021307:94625-94644 | None:intergenic | 45.0% | |
!! | TACACTGGTGGTTGGTAAAC+CGG | - | tig0021307:94642-94661 | None:intergenic | 45.0% |
TCAACTGGTGGCTTATACAC+TGG | - | tig0021307:94657-94676 | None:intergenic | 45.0% | |
TACACAGGTGGCTTATACAC+AGG | - | tig0021307:94717-94736 | None:intergenic | 45.0% | |
! | TACACAGGTGGCTTTTCTAC+CGG | - | tig0021307:94747-94766 | None:intergenic | 45.0% |
AACAGGAGGTTTGTAAACCG+GGG | - | tig0021307:94790-94809 | None:intergenic | 45.0% | |
TAAACAGGAGGCTTCTCAAC+TGG | - | tig0021307:94837-94856 | None:intergenic | 45.0% | |
TATACCGGAGGCTTGTAAAC+AGG | - | tig0021307:94852-94871 | None:intergenic | 45.0% | |
! | ACTACTGGTGGCTTGTAAAC+TGG | - | tig0021307:94882-94901 | None:intergenic | 45.0% |
TATACAGGTGGCTTCACTAC+TGG | - | tig0021307:94897-94916 | None:intergenic | 45.0% | |
TAGACTGGAGGCTTGTATAC+AGG | - | tig0021307:94912-94931 | None:intergenic | 45.0% | |
TAAACAGGAGGCTTGTACAC+CGG | - | tig0021307:94972-94991 | None:intergenic | 45.0% | |
! | TCAACTGGTGGCTTGTAAAC+AGG | - | tig0021307:95002-95021 | None:intergenic | 45.0% |
TAAACAGGAGGCTTCTCAAC+TGG | - | tig0021307:94837-94856 | None:intergenic | 45.0% | |
! | TAAACTGGTGGCTTGTACAC+CGG | - | tig0021307:95047-95066 | None:intergenic | 45.0% |
! | ACTACTGGTGGCTTGTAAAC+TGG | - | tig0021307:94882-94901 | None:intergenic | 45.0% |
TAGACTGGAGGCTTGTATAC+AGG | - | tig0021307:94912-94931 | None:intergenic | 45.0% | |
TCAACTGGAGGCTTGTAAAC+GGG | - | tig0021307:95122-95141 | None:intergenic | 45.0% | |
CTCAACTGGAGGCTTGTAAA+CGG | - | tig0021307:95123-95142 | None:intergenic | 45.0% | |
! | TAAACAGGTGGCTTGTAGAC+TGG | - | tig0021307:95152-95171 | None:intergenic | 45.0% |
AGACTGGAGGTTTCTCAACT+GGG | - | tig0021307:95181-95200 | None:intergenic | 45.0% | |
TAGACTGGAGGTTTCTCAAC+TGG | - | tig0021307:95182-95201 | None:intergenic | 45.0% | |
! | TAAACTGGTGGCTTGTAGAC+TGG | - | tig0021307:95197-95216 | None:intergenic | 45.0% |
TGCTCTCTTTGTCATCCCTC+AGG | + | tig0021307:94593-94612 | Msa1390040:CDS | 50.0% | |
GCTCTCTTTGTCATCCCTCA+GGG | + | tig0021307:94594-94613 | Msa1390040:CDS | 50.0% | |
GTGGCTTATACACTGGTGGT+TGG | - | tig0021307:94650-94669 | None:intergenic | 50.0% | |
ACTGGTGGCTTATACACTGG+TGG | - | tig0021307:94654-94673 | None:intergenic | 50.0% | |
TAGACAGGGGGTTTCTCAAC+TGG | - | tig0021307:94672-94691 | None:intergenic | 50.0% | |
TACAGGGGGTTTGTAGACAG+GGG | - | tig0021307:94685-94704 | None:intergenic | 50.0% | |
CTACAGGGGGTTTGTAGACA+GGG | - | tig0021307:94686-94705 | None:intergenic | 50.0% | |
TCTACAGGGGGTTTGTAGAC+AGG | - | tig0021307:94687-94706 | None:intergenic | 50.0% | |
ACACAGGTGGCTTCTCTACA+GGG | - | tig0021307:94701-94720 | None:intergenic | 50.0% | |
TACACAGGTGGCTTCTCTAC+AGG | - | tig0021307:94702-94721 | None:intergenic | 50.0% | |
ACAGGTGGCTTATACACAGG+TGG | - | tig0021307:94714-94733 | None:intergenic | 50.0% | |
! | ACACAGGTGGCTTTTCTACC+GGG | - | tig0021307:94746-94765 | None:intergenic | 50.0% |
ACAGGAGGTTTGTAAACCGG+GGG | - | tig0021307:94789-94808 | None:intergenic | 50.0% | |
ACCTCCTGTTTACAAGCCAC+CGG | + | tig0021307:94800-94819 | Msa1390040:CDS | 50.0% | |
! | TACACCGGTGGCTTGTAAAC+AGG | - | tig0021307:94807-94826 | None:intergenic | 50.0% |
! | TCAACTGGTGGCTTGTACAC+CGG | - | tig0021307:94822-94841 | None:intergenic | 50.0% |
! | ACTGGTGGCTTGTAAACTGG+AGG | - | tig0021307:94879-94898 | None:intergenic | 50.0% |
ACTGGAGGCTTGTATACAGG+TGG | - | tig0021307:94909-94928 | None:intergenic | 50.0% | |
! | TCAACTGGTGGCTTGTAGAC+TGG | - | tig0021307:94927-94946 | None:intergenic | 50.0% |
TAGACTGGAGGCTTCTCAAC+TGG | - | tig0021307:94942-94961 | None:intergenic | 50.0% | |
ACAGGAGGCTTGTAAACAGG+AGG | - | tig0021307:94984-95003 | None:intergenic | 50.0% | |
! | ACTGGTGGCTTGTAAACAGG+AGG | - | tig0021307:94999-95018 | None:intergenic | 50.0% |
TACACCGGAGGCTTGTAAAC+AGG | - | tig0021307:95032-95051 | None:intergenic | 50.0% | |
! | ACTGGTGGCTTGTAAACTGG+TGG | - | tig0021307:94879-94898 | None:intergenic | 50.0% |
ACAGGTGGCTTAACTACTGG+TGG | - | tig0021307:95074-95093 | None:intergenic | 50.0% | |
ACTGGAGGCTTGTATACAGG+TGG | - | tig0021307:94909-94928 | None:intergenic | 50.0% | |
! | TAAACGGGTGGCTTGTAGAC+TGG | - | tig0021307:95107-95126 | None:intergenic | 50.0% |
TAGACTGGAGGCTTCTCAAC+TGG | - | tig0021307:94942-94961 | None:intergenic | 50.0% | |
TCAACTGGGGGCTTGTAAAC+AGG | - | tig0021307:95167-95186 | None:intergenic | 50.0% | |
ACTGGAGGTTTCTCAACTGG+GGG | - | tig0021307:95179-95198 | None:intergenic | 50.0% | |
GACTGGAGGTTTCTCAACTG+GGG | - | tig0021307:95180-95199 | None:intergenic | 50.0% | |
ACTGGAGGCTTGTAAACTGG+TGG | - | tig0021307:95209-95228 | None:intergenic | 50.0% | |
TCGACTGGAGGCTTGTAAAC+TGG | - | tig0021307:95212-95231 | None:intergenic | 50.0% | |
TAAACTGGTGGCTTCTCGAC+TGG | - | tig0021307:95227-95246 | None:intergenic | 50.0% | |
GTCGAGAAGCCACCAGTTTA+CGG | + | tig0021307:95227-95246 | Msa1390040:CDS | 50.0% | |
!! | ACTGGTGGTTGGTAAACCGG+AGG | - | tig0021307:94639-94658 | None:intergenic | 55.0% |
ACAGGGGGTTTCTCAACTGG+TGG | - | tig0021307:94669-94688 | None:intergenic | 55.0% | |
ACAGGGGGTTTGTAGACAGG+GGG | - | tig0021307:94684-94703 | None:intergenic | 55.0% | |
ACAGGTGGCTTCTCTACAGG+GGG | - | tig0021307:94699-94718 | None:intergenic | 55.0% | |
CACAGGTGGCTTCTCTACAG+GGG | - | tig0021307:94700-94719 | None:intergenic | 55.0% | |
! | ACAGGTGGCTTTTCTACCGG+GGG | - | tig0021307:94744-94763 | None:intergenic | 55.0% |
! | CACAGGTGGCTTTTCTACCG+GGG | - | tig0021307:94745-94764 | None:intergenic | 55.0% |
ACAGGGGGTTTGTACACAGG+TGG | - | tig0021307:94759-94778 | None:intergenic | 55.0% | |
ACGACAGGGGGTTTGTACAC+AGG | - | tig0021307:94762-94781 | None:intergenic | 55.0% | |
AAACCGGGGGTTTCACGACA+GGG | - | tig0021307:94776-94795 | None:intergenic | 55.0% | |
TAAACCGGGGGTTTCACGAC+AGG | - | tig0021307:94777-94796 | None:intergenic | 55.0% | |
! | ACCGGTGGCTTGTAAACAGG+AGG | - | tig0021307:94804-94823 | None:intergenic | 55.0% |
ACAGGAGGCTTCTCAACTGG+TGG | - | tig0021307:94834-94853 | None:intergenic | 55.0% | |
GCCTCCTGTTTACAAGCCTC+CGG | + | tig0021307:94845-94864 | Msa1390040:CDS | 55.0% | |
ACCGGAGGCTTGTAAACAGG+AGG | - | tig0021307:94849-94868 | None:intergenic | 55.0% | |
ACTGGAGGCTTGTATACCGG+AGG | - | tig0021307:94864-94883 | None:intergenic | 55.0% | |
ACAGGTGGCTTCACTACTGG+TGG | - | tig0021307:94894-94913 | None:intergenic | 55.0% | |
! | ACTGGTGGCTTGTAGACTGG+AGG | - | tig0021307:94924-94943 | None:intergenic | 55.0% |
ACTGGAGGCTTCTCAACTGG+TGG | - | tig0021307:94939-94958 | None:intergenic | 55.0% | |
! | TACACCGGTGGCTTGTAGAC+TGG | - | tig0021307:94957-94976 | None:intergenic | 55.0% |
ACAGGAGGCTTCTCAACTGG+TGG | - | tig0021307:94834-94853 | None:intergenic | 55.0% | |
GCCTCCTGTTTACAAGCCTC+CGG | + | tig0021307:94845-94864 | Msa1390040:CDS | 55.0% | |
ACCGGAGGCTTGTAAACAGG+AGG | - | tig0021307:94849-94868 | None:intergenic | 55.0% | |
ACTGGAGGCTTGTAAACGGG+TGG | - | tig0021307:95119-95138 | None:intergenic | 55.0% | |
ACTGGAGGCTTCTCAACTGG+AGG | - | tig0021307:94939-94958 | None:intergenic | 55.0% | |
! | ACAGGTGGCTTGTAGACTGG+AGG | - | tig0021307:95149-95168 | None:intergenic | 55.0% |
ACTGGGGGCTTGTAAACAGG+TGG | - | tig0021307:95164-95183 | None:intergenic | 55.0% | |
! | ACTGGTGGCTTGTAGACTGG+AGG | - | tig0021307:94924-94943 | None:intergenic | 55.0% |
TGAGGAGGTCCGTAAACTGG+TGG | - | tig0021307:95239-95258 | None:intergenic | 55.0% | |
TGGTGAGGAGGTCCGTAAAC+TGG | - | tig0021307:95242-95261 | None:intergenic | 55.0% | |
TCTACCGGGGGCTTGTACAC+AGG | - | tig0021307:94732-94751 | None:intergenic | 60.0% | |
AACCGGGGGTTTCACGACAG+GGG | - | tig0021307:94775-94794 | None:intergenic | 60.0% | |
! | ACTGGTGGCTTGTACACCGG+TGG | - | tig0021307:94819-94838 | None:intergenic | 60.0% |
GCCTCCAGTCTACAAGCCAC+CGG | + | tig0021307:94920-94939 | Msa1390040:CDS | 60.0% | |
! | ACCGGTGGCTTGTAGACTGG+AGG | - | tig0021307:94954-94973 | None:intergenic | 60.0% |
ACAGGAGGCTTGTACACCGG+TGG | - | tig0021307:94969-94988 | None:intergenic | 60.0% | |
! | ACTGGTGGCTTGTACACCGG+AGG | - | tig0021307:94819-94838 | None:intergenic | 60.0% |
! | ACGGGTGGCTTGTAGACTGG+AGG | - | tig0021307:95104-95123 | None:intergenic | 60.0% |
ACTGGTGGCTTCTCGACTGG+AGG | - | tig0021307:95224-95243 | None:intergenic | 60.0% | |
GCCACCTGTGTACAAGCCCC+CGG | + | tig0021307:94725-94744 | Msa1390040:CDS | 65.0% | |
ACCGGGGGCTTGTACACAGG+TGG | - | tig0021307:94729-94748 | None:intergenic | 65.0% | |
ACCCCCTGTCGTGAAACCCC+CGG | + | tig0021307:94770-94789 | Msa1390040:CDS | 65.0% | |
ACCGGGGGTTTCACGACAGG+GGG | - | tig0021307:94774-94793 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0021307 | gene | 94558 | 95268 | 94558 | ID=Msa1390040;Name=Msa1390040 |
tig0021307 | mRNA | 94558 | 95268 | 94558 | ID=Msa1390040-mRNA-1;Parent=Msa1390040;Name=Msa1390040-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|236 |
tig0021307 | exon | 94558 | 95268 | 94558 | ID=Msa1390040-mRNA-1:exon:11952;Parent=Msa1390040-mRNA-1 |
tig0021307 | CDS | 94558 | 95268 | 94558 | ID=Msa1390040-mRNA-1:cds;Parent=Msa1390040-mRNA-1 |
Gene Sequence |
Protein sequence |