Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1173290 | AET02690.2 | 83.285 | 347 | 28 | 1 | 28 | 374 | 12 | 328 | 0.0 | 571 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1173290 | sp|P21745|EA30_VICFA | 63.158 | 152 | 55 | 1 | 211 | 361 | 108 | 259 | 2.59e-63 | 206 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1173290 | G7L8G6 | 83.285 | 347 | 28 | 1 | 28 | 374 | 12 | 328 | 0.0 | 571 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa1173290 | 0.827047 | 1.941062e-54 | -8.615850e-47 |
| Msa0027860 | Msa1173290 | 0.810270 | 1.252938e-50 | -8.615850e-47 |
| Msa0031650 | Msa1173290 | 0.802210 | 6.250572e-49 | -8.615850e-47 |
| Msa0036580 | Msa1173290 | 0.838817 | 2.295981e-57 | -8.615850e-47 |
| Msa0046390 | Msa1173290 | 0.853670 | 2.049815e-61 | -8.615850e-47 |
| Msa0059880 | Msa1173290 | 0.858469 | 8.065823e-63 | -8.615850e-47 |
| Msa0061600 | Msa1173290 | 0.810332 | 1.214949e-50 | -8.615850e-47 |
| Msa0080010 | Msa1173290 | 0.810485 | 1.126302e-50 | -8.615850e-47 |
| Msa0085110 | Msa1173290 | 0.844049 | 9.617432e-59 | -8.615850e-47 |
| Msa0085710 | Msa1173290 | 0.809653 | 1.701105e-50 | -8.615850e-47 |
| Msa0093530 | Msa1173290 | 0.814977 | 1.170147e-51 | -8.615850e-47 |
| Msa0096860 | Msa1173290 | 0.825043 | 5.811399e-54 | -8.615850e-47 |
| Msa0630130 | Msa1173290 | 0.866714 | 2.330062e-65 | -8.615850e-47 |
| Msa0634290 | Msa1173290 | 0.843773 | 1.139882e-58 | -8.615850e-47 |
| Msa0640290 | Msa1173290 | 0.820028 | 8.515553e-53 | -8.615850e-47 |
| Msa0645100 | Msa1173290 | 0.813217 | 2.862711e-51 | -8.615850e-47 |
| Msa0645120 | Msa1173290 | 0.847409 | 1.178023e-59 | -8.615850e-47 |
| Msa0667640 | Msa1173290 | 0.830234 | 3.294718e-55 | -8.615850e-47 |
| Msa0668210 | Msa1173290 | 0.860396 | 2.126350e-63 | -8.615850e-47 |
| Msa0668220 | Msa1173290 | 0.830755 | 2.456586e-55 | -8.615850e-47 |
| Msa0668230 | Msa1173290 | 0.843286 | 1.538825e-58 | -8.615850e-47 |
| Msa0670360 | Msa1173290 | 0.832159 | 1.108162e-55 | -8.615850e-47 |
| Msa0671490 | Msa1173290 | 0.817840 | 2.675884e-52 | -8.615850e-47 |
| Msa0678620 | Msa1173290 | 0.829893 | 3.989263e-55 | -8.615850e-47 |
| Msa0682420 | Msa1173290 | 0.802409 | 5.686563e-49 | -8.615850e-47 |
| Msa0684590 | Msa1173290 | 0.836746 | 7.810258e-57 | -8.615850e-47 |
| Msa0684600 | Msa1173290 | 0.826868 | 2.141769e-54 | -8.615850e-47 |
| Msa0685080 | Msa1173290 | 0.803870 | 2.835921e-49 | -8.615850e-47 |
| Msa0708680 | Msa1173290 | 0.801095 | 1.058129e-48 | -8.615850e-47 |
| Msa0711240 | Msa1173290 | 0.831660 | 1.472097e-55 | -8.615850e-47 |
| Msa0715260 | Msa1173290 | 0.850730 | 1.405285e-60 | -8.615850e-47 |
| Msa0716600 | Msa1173290 | 0.820933 | 5.277938e-53 | -8.615850e-47 |
| Msa0721260 | Msa1173290 | 0.822656 | 2.107608e-53 | -8.615850e-47 |
| Msa0727480 | Msa1173290 | 0.815708 | 8.050314e-52 | -8.615850e-47 |
| Msa0728210 | Msa1173290 | 0.831629 | 1.497519e-55 | -8.615850e-47 |
| Msa0728520 | Msa1173290 | 0.813834 | 2.094081e-51 | -8.615850e-47 |
| Msa0735280 | Msa1173290 | 0.812892 | 3.372224e-51 | -8.615850e-47 |
| Msa0735340 | Msa1173290 | 0.820031 | 8.499873e-53 | -8.615850e-47 |
| Msa0738660 | Msa1173290 | 0.811003 | 8.700034e-51 | -8.615850e-47 |
| Msa0747500 | Msa1173290 | 0.806348 | 8.594276e-50 | -8.615850e-47 |
| Msa0751960 | Msa1173290 | 0.802526 | 5.379872e-49 | -8.615850e-47 |
| Msa0757240 | Msa1173290 | 0.851589 | 8.041225e-61 | -8.615850e-47 |
| Msa0758150 | Msa1173290 | 0.809321 | 2.004657e-50 | -8.615850e-47 |
| Msa0768670 | Msa1173290 | 0.811983 | 5.328669e-51 | -8.615850e-47 |
| Msa0776540 | Msa1173290 | 0.815287 | 9.988188e-52 | -8.615850e-47 |
| Msa0777070 | Msa1173290 | 0.823514 | 1.329841e-53 | -8.615850e-47 |
| Msa0787860 | Msa1173290 | 0.843426 | 1.411138e-58 | -8.615850e-47 |
| Msa0789410 | Msa1173290 | 0.835285 | 1.834361e-56 | -8.615850e-47 |
| Msa0793060 | Msa1173290 | -0.804512 | 2.084756e-49 | -8.615850e-47 |
| Msa0795330 | Msa1173290 | 0.806116 | 9.614276e-50 | -8.615850e-47 |
| Msa0798230 | Msa1173290 | 0.861714 | 8.451433e-64 | -8.615850e-47 |
| Msa0803310 | Msa1173290 | 0.813873 | 2.053435e-51 | -8.615850e-47 |
| Msa0814160 | Msa1173290 | 0.800804 | 1.213600e-48 | -8.615850e-47 |
| Msa0816140 | Msa1173290 | 0.817360 | 3.433489e-52 | -8.615850e-47 |
| Msa0817100 | Msa1173290 | 0.819166 | 1.339792e-52 | -8.615850e-47 |
| Msa0824850 | Msa1173290 | 0.818704 | 1.705481e-52 | -8.615850e-47 |
| Msa0824860 | Msa1173290 | 0.827162 | 1.822265e-54 | -8.615850e-47 |
| Msa0833230 | Msa1173290 | 0.801413 | 9.112284e-49 | -8.615850e-47 |
| Msa0836740 | Msa1173290 | 0.850141 | 2.056826e-60 | -8.615850e-47 |
| Msa0126960 | Msa1173290 | 0.816562 | 5.187694e-52 | -8.615850e-47 |
| Msa0129270 | Msa1173290 | 0.811367 | 7.255483e-51 | -8.615850e-47 |
| Msa0130710 | Msa1173290 | 0.810875 | 9.272529e-51 | -8.615850e-47 |
| Msa0139270 | Msa1173290 | 0.843470 | 1.374086e-58 | -8.615850e-47 |
| Msa0140270 | Msa1173290 | 0.800415 | 1.456756e-48 | -8.615850e-47 |
| Msa0150910 | Msa1173290 | 0.843107 | 1.716569e-58 | -8.615850e-47 |
| Msa0154750 | Msa1173290 | 0.806042 | 9.967777e-50 | -8.615850e-47 |
| Msa0160580 | Msa1173290 | 0.829673 | 4.512646e-55 | -8.615850e-47 |
| Msa0171740 | Msa1173290 | 0.805158 | 1.527589e-49 | -8.615850e-47 |
| Msa0176600 | Msa1173290 | 0.804663 | 1.938816e-49 | -8.615850e-47 |
| Msa0176620 | Msa1173290 | 0.834388 | 3.085186e-56 | -8.615850e-47 |
| Msa0177550 | Msa1173290 | 0.847265 | 1.290278e-59 | -8.615850e-47 |
| Msa0190670 | Msa1173290 | 0.815189 | 1.050070e-51 | -8.615850e-47 |
| Msa0194230 | Msa1173290 | 0.811015 | 8.648403e-51 | -8.615850e-47 |
| Msa0195190 | Msa1173290 | 0.826523 | 2.588618e-54 | -8.615850e-47 |
| Msa0197750 | Msa1173290 | 0.814756 | 1.309779e-51 | -8.615850e-47 |
| Msa0199860 | Msa1173290 | 0.828883 | 7.017962e-55 | -8.615850e-47 |
| Msa0207640 | Msa1173290 | 0.816768 | 4.664388e-52 | -8.615850e-47 |
| Msa0212550 | Msa1173290 | 0.820903 | 5.364012e-53 | -8.615850e-47 |
| Msa0225910 | Msa1173290 | 0.837021 | 6.644190e-57 | -8.615850e-47 |
| Msa0225920 | Msa1173290 | 0.807255 | 5.526387e-50 | -8.615850e-47 |
| Msa0234120 | Msa1173290 | 0.879085 | 1.661098e-69 | -8.615850e-47 |
| Msa0234130 | Msa1173290 | 0.818550 | 1.848568e-52 | -8.615850e-47 |
| Msa0236610 | Msa1173290 | 0.801957 | 7.046697e-49 | -8.615850e-47 |
| Msa0374040 | Msa1173290 | 0.806116 | 9.617027e-50 | -8.615850e-47 |
| Msa0375550 | Msa1173290 | 0.823051 | 1.705102e-53 | -8.615850e-47 |
| Msa0378390 | Msa1173290 | 0.803076 | 4.141598e-49 | -8.615850e-47 |
| Msa0379500 | Msa1173290 | -0.812113 | 4.991224e-51 | -8.615850e-47 |
| Msa0393900 | Msa1173290 | 0.812022 | 5.224288e-51 | -8.615850e-47 |
| Msa0396700 | Msa1173290 | 0.804155 | 2.473769e-49 | -8.615850e-47 |
| Msa0396790 | Msa1173290 | 0.800876 | 1.173026e-48 | -8.615850e-47 |
| Msa0398690 | Msa1173290 | 0.815739 | 7.922602e-52 | -8.615850e-47 |
| Msa0409490 | Msa1173290 | 0.833005 | 6.836225e-56 | -8.615850e-47 |
| Msa0414480 | Msa1173290 | 0.822858 | 1.891900e-53 | -8.615850e-47 |
| Msa0418150 | Msa1173290 | 0.809548 | 1.792086e-50 | -8.615850e-47 |
| Msa0424240 | Msa1173290 | 0.842347 | 2.733121e-58 | -8.615850e-47 |
| Msa0424300 | Msa1173290 | 0.822549 | 2.232136e-53 | -8.615850e-47 |
| Msa0427740 | Msa1173290 | 0.806989 | 6.291794e-50 | -8.615850e-47 |
| Msa0427970 | Msa1173290 | 0.805133 | 1.546320e-49 | -8.615850e-47 |
| Msa0444400 | Msa1173290 | 0.838821 | 2.290301e-57 | -8.615850e-47 |
| Msa0445530 | Msa1173290 | 0.830025 | 3.704195e-55 | -8.615850e-47 |
| Msa0453970 | Msa1173290 | 0.806848 | 6.738133e-50 | -8.615850e-47 |
| Msa0464300 | Msa1173290 | 0.828542 | 8.486715e-55 | -8.615850e-47 |
| Msa0464310 | Msa1173290 | 0.836602 | 8.498949e-57 | -8.615850e-47 |
| Msa0469450 | Msa1173290 | 0.813476 | 2.510698e-51 | -8.615850e-47 |
| Msa0471210 | Msa1173290 | 0.816184 | 6.302142e-52 | -8.615850e-47 |
| Msa0478400 | Msa1173290 | 0.834195 | 3.448830e-56 | -8.615850e-47 |
| Msa0985250 | Msa1173290 | 0.852250 | 5.222174e-61 | -8.615850e-47 |
| Msa0985260 | Msa1173290 | 0.837177 | 6.062605e-57 | -8.615850e-47 |
| Msa0985290 | Msa1173290 | 0.838080 | 3.555208e-57 | -8.615850e-47 |
| Msa0985700 | Msa1173290 | 0.835264 | 1.856499e-56 | -8.615850e-47 |
| Msa0987550 | Msa1173290 | 0.811026 | 8.599499e-51 | -8.615850e-47 |
| Msa0996940 | Msa1173290 | 0.801626 | 8.238966e-49 | -8.615850e-47 |
| Msa0996980 | Msa1173290 | 0.837092 | 6.372597e-57 | -8.615850e-47 |
| Msa1006030 | Msa1173290 | 0.802514 | 5.411440e-49 | -8.615850e-47 |
| Msa1006170 | Msa1173290 | 0.817366 | 3.423648e-52 | -8.615850e-47 |
| Msa1007930 | Msa1173290 | 0.802132 | 6.487290e-49 | -8.615850e-47 |
| Msa1014120 | Msa1173290 | -0.804393 | 2.207399e-49 | -8.615850e-47 |
| Msa1021620 | Msa1173290 | 0.800723 | 1.260968e-48 | -8.615850e-47 |
| Msa1024350 | Msa1173290 | 0.830403 | 2.995804e-55 | -8.615850e-47 |
| Msa1024420 | Msa1173290 | 0.808817 | 2.570786e-50 | -8.615850e-47 |
| Msa1026050 | Msa1173290 | 0.811543 | 6.641401e-51 | -8.615850e-47 |
| Msa1026170 | Msa1173290 | 0.832833 | 7.544370e-56 | -8.615850e-47 |
| Msa1046220 | Msa1173290 | 0.833039 | 6.706079e-56 | -8.615850e-47 |
| Msa1048390 | Msa1173290 | 0.808655 | 2.784166e-50 | -8.615850e-47 |
| Msa1061670 | Msa1173290 | 0.831059 | 2.068724e-55 | -8.615850e-47 |
| Msa1061760 | Msa1173290 | 0.803490 | 3.400297e-49 | -8.615850e-47 |
| Msa1064930 | Msa1173290 | 0.805663 | 1.197662e-49 | -8.615850e-47 |
| Msa1064940 | Msa1173290 | 0.845201 | 4.707638e-59 | -8.615850e-47 |
| Msa1083100 | Msa1173290 | 0.810732 | 9.957147e-51 | -8.615850e-47 |
| Msa1087370 | Msa1173290 | 0.822188 | 2.707817e-53 | -8.615850e-47 |
| Msa1087380 | Msa1173290 | 0.863187 | 2.976167e-64 | -8.615850e-47 |
| Msa1099640 | Msa1173290 | 0.811777 | 5.908227e-51 | -8.615850e-47 |
| Msa1100330 | Msa1173290 | 0.808370 | 3.201759e-50 | -8.615850e-47 |
| Msa1106960 | Msa1173290 | 0.820302 | 7.371635e-53 | -8.615850e-47 |
| Msa0242390 | Msa1173290 | 0.836921 | 7.049519e-57 | -8.615850e-47 |
| Msa0243970 | Msa1173290 | 0.826946 | 2.051802e-54 | -8.615850e-47 |
| Msa0243990 | Msa1173290 | 0.812050 | 5.153276e-51 | -8.615850e-47 |
| Msa0245660 | Msa1173290 | 0.824313 | 8.638676e-54 | -8.615850e-47 |
| Msa0252930 | Msa1173290 | 0.819037 | 1.432911e-52 | -8.615850e-47 |
| Msa0266640 | Msa1173290 | 0.867973 | 9.216816e-66 | -8.615850e-47 |
| Msa0266650 | Msa1173290 | 0.856337 | 3.445019e-62 | -8.615850e-47 |
| Msa0274250 | Msa1173290 | 0.829410 | 5.230240e-55 | -8.615850e-47 |
| Msa0274260 | Msa1173290 | 0.840799 | 6.996333e-58 | -8.615850e-47 |
| Msa0278460 | Msa1173290 | 0.803847 | 2.867704e-49 | -8.615850e-47 |
| Msa0278950 | Msa1173290 | 0.861248 | 1.172466e-63 | -8.615850e-47 |
| Msa0278960 | Msa1173290 | 0.802431 | 5.629504e-49 | -8.615850e-47 |
| Msa0287720 | Msa1173290 | 0.808147 | 3.573313e-50 | -8.615850e-47 |
| Msa0295520 | Msa1173290 | -0.815949 | 7.111124e-52 | -8.615850e-47 |
| Msa0297650 | Msa1173290 | 0.800511 | 1.392986e-48 | -8.615850e-47 |
| Msa0314440 | Msa1173290 | 0.804635 | 1.964700e-49 | -8.615850e-47 |
| Msa0315300 | Msa1173290 | 0.800947 | 1.134830e-48 | -8.615850e-47 |
| Msa0318360 | Msa1173290 | 0.804912 | 1.720217e-49 | -8.615850e-47 |
| Msa0318370 | Msa1173290 | 0.873410 | 1.502752e-67 | -8.615850e-47 |
| Msa0319830 | Msa1173290 | 0.800348 | 1.503527e-48 | -8.615850e-47 |
| Msa0322460 | Msa1173290 | 0.820095 | 8.220452e-53 | -8.615850e-47 |
| Msa0346170 | Msa1173290 | 0.800045 | 1.732577e-48 | -8.615850e-47 |
| Msa0349910 | Msa1173290 | 0.807358 | 5.256951e-50 | -8.615850e-47 |
| Msa0356200 | Msa1173290 | 0.843298 | 1.526959e-58 | -8.615850e-47 |
| Msa0356240 | Msa1173290 | 0.805525 | 1.279753e-49 | -8.615850e-47 |
| Msa0356250 | Msa1173290 | 0.835789 | 1.367752e-56 | -8.615850e-47 |
| Msa0356380 | Msa1173290 | 0.833546 | 5.013214e-56 | -8.615850e-47 |
| Msa0356410 | Msa1173290 | 0.839415 | 1.606260e-57 | -8.615850e-47 |
| Msa0361700 | Msa1173290 | 0.843043 | 1.786217e-58 | -8.615850e-47 |
| Msa1107320 | Msa1173290 | 0.812813 | 3.510003e-51 | -8.615850e-47 |
| Msa1109880 | Msa1173290 | 0.820492 | 6.667293e-53 | -8.615850e-47 |
| Msa1109890 | Msa1173290 | 0.845363 | 4.254943e-59 | -8.615850e-47 |
| Msa1110040 | Msa1173290 | 0.862965 | 3.487895e-64 | -8.615850e-47 |
| Msa1112630 | Msa1173290 | 0.800293 | 1.542420e-48 | -8.615850e-47 |
| Msa1124440 | Msa1173290 | -0.802584 | 5.234484e-49 | -8.615850e-47 |
| Msa1138110 | Msa1173290 | 0.828879 | 7.032612e-55 | -8.615850e-47 |
| Msa1147030 | Msa1173290 | 0.804691 | 1.913406e-49 | -8.615850e-47 |
| Msa1150860 | Msa1173290 | 0.809748 | 1.623353e-50 | -8.615850e-47 |
| Msa1150880 | Msa1173290 | 0.810795 | 9.650713e-51 | -8.615850e-47 |
| Msa1152330 | Msa1173290 | 0.802015 | 6.855019e-49 | -8.615850e-47 |
| Msa1153690 | Msa1173290 | 0.872952 | 2.141431e-67 | -8.615850e-47 |
| Msa1173290 | Msa1177090 | 0.823970 | 1.039858e-53 | -8.615850e-47 |
| Msa1173290 | Msa1208830 | 0.821187 | 4.613949e-53 | -8.615850e-47 |
| Msa1173290 | Msa1208910 | 0.829453 | 5.104024e-55 | -8.615850e-47 |
| Msa1173290 | Msa1214960 | 0.811678 | 6.208334e-51 | -8.615850e-47 |
| Msa1173290 | Msa1216600 | 0.800558 | 1.362031e-48 | -8.615850e-47 |
| Msa1173290 | Msa1219780 | 0.814547 | 1.457383e-51 | -8.615850e-47 |
| Msa1173290 | Msa1221170 | 0.863084 | 3.204598e-64 | -8.615850e-47 |
| Msa1173290 | Msa1246420 | -0.801657 | 8.118722e-49 | -8.615850e-47 |
| Msa1173290 | Msa1263370 | 0.801717 | 7.892989e-49 | -8.615850e-47 |
| Msa1173290 | Msa1265500 | 0.861711 | 8.468025e-64 | -8.615850e-47 |
| Msa1173290 | Msa1266710 | 0.818501 | 1.896627e-52 | -8.615850e-47 |
| Msa1173290 | Msa1299280 | 0.805924 | 1.055266e-49 | -8.615850e-47 |
| Msa1173290 | Msa1299310 | 0.804328 | 2.276931e-49 | -8.615850e-47 |
| Msa1173290 | Msa1319190 | 0.802924 | 4.452364e-49 | -8.615850e-47 |
| Msa1173290 | Msa1323030 | 0.836651 | 8.259371e-57 | -8.615850e-47 |
| Msa1173290 | Msa1323150 | 0.888492 | 5.626416e-73 | -8.615850e-47 |
| Msa1173290 | Msa1323160 | 0.838500 | 2.771225e-57 | -8.615850e-47 |
| Msa1173290 | Msa1341030 | 0.855167 | 7.566909e-62 | -8.615850e-47 |
| Msa1173290 | Msa1349420 | 0.805449 | 1.327690e-49 | -8.615850e-47 |
| Msa1173290 | Msa1355330 | 0.815860 | 7.444001e-52 | -8.615850e-47 |
| Msa1173290 | Msa1355340 | 0.822597 | 2.175393e-53 | -8.615850e-47 |
| Msa1173290 | Msa1361500 | 0.823554 | 1.301521e-53 | -8.615850e-47 |
| Msa1173290 | Msa1362520 | 0.808576 | 2.894202e-50 | -8.615850e-47 |
| Msa1173290 | Msa1373560 | 0.837364 | 5.428963e-57 | -8.615850e-47 |
| Msa1173290 | Msa1378950 | 0.810896 | 9.175909e-51 | -8.615850e-47 |
| Msa1173290 | Msa1379250 | 0.824825 | 6.542691e-54 | -8.615850e-47 |
| Msa1173290 | Msa1382180 | 0.800412 | 1.459079e-48 | -8.615850e-47 |
| Msa1173290 | Msa1386120 | 0.812494 | 4.121652e-51 | -8.615850e-47 |
| Msa1173290 | Msa1395690 | 0.837280 | 5.706322e-57 | -8.615850e-47 |
| Msa1173290 | Msa1398110 | 0.823509 | 1.333271e-53 | -8.615850e-47 |
| Msa1173290 | Msa1407210 | 0.811218 | 7.813320e-51 | -8.615850e-47 |
| Msa1173290 | Msa1411550 | 0.825639 | 4.201032e-54 | -8.615850e-47 |
| Msa1173290 | Msa1419390 | 0.832892 | 7.291662e-56 | -8.615850e-47 |
| Msa1173290 | Msa1427670 | 0.812028 | 5.209262e-51 | -8.615850e-47 |
| Msa1173290 | Msa1431870 | -0.805864 | 1.086580e-49 | -8.615850e-47 |
| Msa1173290 | Msa1441300 | 0.826209 | 3.075301e-54 | -8.615850e-47 |
| Msa1173290 | Msa1445780 | 0.806562 | 7.745515e-50 | -8.615850e-47 |
| Msa1173290 | Msa1446090 | 0.807384 | 5.188483e-50 | -8.615850e-47 |
| Msa1173290 | Msa1448150 | 0.845486 | 3.942161e-59 | -8.615850e-47 |
| Msa1173290 | Msa1453650 | 0.802374 | 5.782069e-49 | -8.615850e-47 |
| Msa1173290 | Msa1459610 | 0.820107 | 8.166214e-53 | -8.615850e-47 |
| Msa0490060 | Msa1173290 | 0.804185 | 2.438333e-49 | -8.615850e-47 |
| Msa0491800 | Msa1173290 | 0.805896 | 1.069799e-49 | -8.615850e-47 |
| Msa0491950 | Msa1173290 | 0.810079 | 1.377668e-50 | -8.615850e-47 |
| Msa0493710 | Msa1173290 | 0.831590 | 1.531770e-55 | -8.615850e-47 |
| Msa0502940 | Msa1173290 | 0.817236 | 3.660732e-52 | -8.615850e-47 |
| Msa0515130 | Msa1173290 | 0.806917 | 6.517782e-50 | -8.615850e-47 |
| Msa0515930 | Msa1173290 | 0.813574 | 2.389173e-51 | -8.615850e-47 |
| Msa0518570 | Msa1173290 | 0.807299 | 5.408972e-50 | -8.615850e-47 |
| Msa0520430 | Msa1173290 | 0.801272 | 9.737001e-49 | -8.615850e-47 |
| Msa0532610 | Msa1173290 | 0.801690 | 7.994108e-49 | -8.615850e-47 |
| Msa0532670 | Msa1173290 | 0.817936 | 2.545655e-52 | -8.615850e-47 |
| Msa0532680 | Msa1173290 | 0.811654 | 6.283775e-51 | -8.615850e-47 |
| Msa0533510 | Msa1173290 | 0.864358 | 1.288155e-64 | -8.615850e-47 |
| Msa0533520 | Msa1173290 | 0.856792 | 2.531431e-62 | -8.615850e-47 |
| Msa0535570 | Msa1173290 | 0.808449 | 3.081030e-50 | -8.615850e-47 |
| Msa0538440 | Msa1173290 | 0.831595 | 1.526784e-55 | -8.615850e-47 |
| Msa0538450 | Msa1173290 | 0.867981 | 9.161181e-66 | -8.615850e-47 |
| Msa0538520 | Msa1173290 | 0.859393 | 4.265967e-63 | -8.615850e-47 |
| Msa0538530 | Msa1173290 | 0.823860 | 1.103451e-53 | -8.615850e-47 |
| Msa0548760 | Msa1173290 | 0.840711 | 7.377869e-58 | -8.615850e-47 |
| Msa0554660 | Msa1173290 | 0.815928 | 7.190008e-52 | -8.615850e-47 |
| Msa0555920 | Msa1173290 | 0.805616 | 1.225196e-49 | -8.615850e-47 |
| Msa0589450 | Msa1173290 | 0.810962 | 8.878957e-51 | -8.615850e-47 |
| Msa0589720 | Msa1173290 | 0.845970 | 2.912348e-59 | -8.615850e-47 |
| Msa0589730 | Msa1173290 | 0.863436 | 2.492324e-64 | -8.615850e-47 |
| Msa0589740 | Msa1173290 | 0.844232 | 8.586360e-59 | -8.615850e-47 |
| Msa0589750 | Msa1173290 | 0.842651 | 2.270489e-58 | -8.615850e-47 |
| Msa0591490 | Msa1173290 | 0.823874 | 1.094725e-53 | -8.615850e-47 |
| Msa0594320 | Msa1173290 | 0.853115 | 2.958363e-61 | -8.615850e-47 |
| Msa0594330 | Msa1173290 | 0.836370 | 9.740152e-57 | -8.615850e-47 |
| Msa0599600 | Msa1173290 | 0.809602 | 1.744703e-50 | -8.615850e-47 |
| Msa0854840 | Msa1173290 | 0.824647 | 7.206925e-54 | -8.615850e-47 |
| Msa0854860 | Msa1173290 | 0.811870 | 5.637994e-51 | -8.615850e-47 |
| Msa0859230 | Msa1173290 | 0.808074 | 3.703140e-50 | -8.615850e-47 |
| Msa0863840 | Msa1173290 | 0.828200 | 1.026258e-54 | -8.615850e-47 |
| Msa0863850 | Msa1173290 | 0.832394 | 9.691429e-56 | -8.615850e-47 |
| Msa0863860 | Msa1173290 | 0.826851 | 2.161553e-54 | -8.615850e-47 |
| Msa0864160 | Msa1173290 | 0.826799 | 2.225238e-54 | -8.615850e-47 |
| Msa0868870 | Msa1173290 | 0.837055 | 6.513024e-57 | -8.615850e-47 |
| Msa0883610 | Msa1173290 | 0.851983 | 6.217395e-61 | -8.615850e-47 |
| Msa0883640 | Msa1173290 | 0.835290 | 1.829188e-56 | -8.615850e-47 |
| Msa0886370 | Msa1173290 | 0.846560 | 2.011323e-59 | -8.615850e-47 |
| Msa0896920 | Msa1173290 | 0.855929 | 4.535341e-62 | -8.615850e-47 |
| Msa0896950 | Msa1173290 | 0.825064 | 5.747659e-54 | -8.615850e-47 |
| Msa0896990 | Msa1173290 | 0.806333 | 8.653880e-50 | -8.615850e-47 |
| Msa0902340 | Msa1173290 | 0.843305 | 1.520854e-58 | -8.615850e-47 |
| Msa0910570 | Msa1173290 | 0.834487 | 2.914058e-56 | -8.615850e-47 |
| Msa0910590 | Msa1173290 | 0.807150 | 5.818548e-50 | -8.615850e-47 |
| Msa0910830 | Msa1173290 | 0.837484 | 5.057321e-57 | -8.615850e-47 |
| Msa0913500 | Msa1173290 | 0.803117 | 4.062222e-49 | -8.615850e-47 |
| Msa0913550 | Msa1173290 | 0.800612 | 1.327930e-48 | -8.615850e-47 |
| Msa0932900 | Msa1173290 | 0.832755 | 7.886216e-56 | -8.615850e-47 |
| Msa0932910 | Msa1173290 | 0.825723 | 4.011576e-54 | -8.615850e-47 |
| Msa0932930 | Msa1173290 | 0.861749 | 8.244065e-64 | -8.615850e-47 |
| Msa0933580 | Msa1173290 | 0.811708 | 6.116244e-51 | -8.615850e-47 |
| Msa0933610 | Msa1173290 | 0.845195 | 4.726390e-59 | -8.615850e-47 |
| Msa0941120 | Msa1173290 | 0.807126 | 5.886707e-50 | -8.615850e-47 |
| Msa0948430 | Msa1173290 | 0.804496 | 2.100764e-49 | -8.615850e-47 |
| Msa0948460 | Msa1173290 | 0.806957 | 6.391926e-50 | -8.615850e-47 |
| Msa0950090 | Msa1173290 | 0.802919 | 4.463961e-49 | -8.615850e-47 |
| Msa0951060 | Msa1173290 | 0.855211 | 7.345490e-62 | -8.615850e-47 |
| Msa0960090 | Msa1173290 | 0.836238 | 1.052057e-56 | -8.615850e-47 |
| Msa0962290 | Msa1173290 | 0.810150 | 1.329777e-50 | -8.615850e-47 |
| Msa0967820 | Msa1173290 | 0.822326 | 2.514826e-53 | -8.615850e-47 |
| Msa0970790 | Msa1173290 | 0.823110 | 1.652357e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1173290 | MtrunA17_Chr8g0355831 | 83.285 | 347 | 28 | 1 | 28 | 374 | 49 | 365 | 0.0 | 570 |
| Msa1173290 | MtrunA17_Chr8g0355841 | 59.672 | 305 | 91 | 7 | 79 | 374 | 242 | 523 | 1.95e-113 | 340 |
| Msa1173290 | MtrunA17_Chr8g0355841 | 49.045 | 157 | 67 | 3 | 30 | 180 | 51 | 200 | 3.33e-37 | 140 |
| Msa1173290 | MtrunA17_Chr8g0355331 | 49.239 | 394 | 146 | 9 | 28 | 374 | 49 | 435 | 8.51e-112 | 333 |
| Msa1173290 | MtrunA17_Chr8g0355321 | 49.102 | 334 | 99 | 7 | 28 | 361 | 41 | 303 | 1.92e-98 | 294 |
| Msa1173290 | MtrunA17_Chr8g0355311 | 63.819 | 199 | 61 | 2 | 176 | 374 | 14 | 201 | 4.06e-88 | 264 |
| Msa1173290 | MtrunA17_Chr8g0355861 | 73.125 | 160 | 43 | 0 | 215 | 374 | 115 | 274 | 4.86e-87 | 264 |
| Msa1173290 | MtrunA17_Chr8g0355861 | 57.576 | 66 | 28 | 0 | 31 | 96 | 53 | 118 | 1.38e-16 | 79.0 |
| Msa1173290 | MtrunA17_Chr8g0355871 | 66.286 | 175 | 57 | 1 | 200 | 374 | 64 | 236 | 1.36e-79 | 244 |
| Msa1173290 | MtrunA17_Chr1g0168781 | 60.606 | 165 | 60 | 2 | 211 | 374 | 109 | 269 | 1.91e-67 | 214 |
| Msa1173290 | MtrunA17_Chr2g0318901 | 55.333 | 150 | 66 | 1 | 213 | 361 | 111 | 260 | 5.00e-57 | 187 |
| Msa1173290 | MtrunA17_Chr2g0318931 | 55.263 | 152 | 65 | 2 | 213 | 361 | 120 | 271 | 6.60e-55 | 182 |
| Msa1173290 | MtrunA17_Chr2g0318871 | 53.333 | 150 | 69 | 1 | 213 | 361 | 111 | 260 | 9.45e-52 | 173 |
| Msa1173290 | MtrunA17_Chr3g0139431 | 38.919 | 185 | 98 | 5 | 191 | 360 | 137 | 321 | 1.12e-33 | 127 |
| Msa1173290 | MtrunA17_Chr1g0146631 | 44.138 | 145 | 75 | 4 | 221 | 359 | 179 | 323 | 2.29e-33 | 126 |
| Msa1173290 | MtrunA17_Chr1g0147331 | 44.138 | 145 | 75 | 4 | 221 | 359 | 179 | 323 | 2.59e-33 | 126 |
| Msa1173290 | MtrunA17_Chr1g0147261 | 43.972 | 141 | 74 | 4 | 223 | 358 | 157 | 297 | 3.30e-33 | 125 |
| Msa1173290 | MtrunA17_Chr1g0147251 | 42.958 | 142 | 76 | 4 | 222 | 358 | 99 | 240 | 6.07e-32 | 120 |
| Msa1173290 | MtrunA17_Chr1g0147301 | 41.781 | 146 | 78 | 4 | 221 | 359 | 138 | 283 | 5.05e-31 | 119 |
| Msa1173290 | MtrunA17_Chr1g0147291 | 41.781 | 146 | 78 | 4 | 221 | 359 | 120 | 265 | 1.61e-30 | 117 |
| Msa1173290 | MtrunA17_Chr1g0147311 | 41.781 | 146 | 78 | 4 | 221 | 359 | 209 | 354 | 4.64e-30 | 118 |
| Msa1173290 | MtrunA17_Chr1g0147271 | 41.781 | 146 | 78 | 4 | 221 | 359 | 238 | 383 | 4.87e-30 | 119 |
| Msa1173290 | MtrunA17_Chr1g0147321 | 41.379 | 145 | 78 | 4 | 221 | 358 | 91 | 235 | 1.27e-29 | 114 |
| Msa1173290 | MtrunA17_Chr1g0147241 | 41.259 | 143 | 79 | 4 | 221 | 358 | 168 | 310 | 1.10e-27 | 110 |
| Msa1173290 | MtrunA17_Chr3g0144421 | 36.735 | 147 | 84 | 5 | 223 | 360 | 156 | 302 | 2.74e-19 | 87.4 |
| Msa1173290 | MtrunA17_Chr3g0138231 | 33.784 | 148 | 88 | 4 | 223 | 360 | 119 | 266 | 5.51e-17 | 80.5 |
| Msa1173290 | MtrunA17_Chr3g0144391 | 33.108 | 148 | 89 | 5 | 223 | 360 | 358 | 505 | 5.53e-17 | 82.4 |
| Msa1173290 | MtrunA17_Chr4g0034821 | 35.135 | 148 | 86 | 5 | 223 | 360 | 144 | 291 | 9.03e-17 | 80.1 |
| Msa1173290 | MtrunA17_Chr3g0144411 | 34.459 | 148 | 87 | 5 | 223 | 360 | 391 | 538 | 2.70e-16 | 80.5 |
| Msa1173290 | MtrunA17_Chr4g0034731 | 34.667 | 150 | 86 | 7 | 223 | 360 | 283 | 432 | 3.25e-16 | 79.7 |
| Msa1173290 | MtrunA17_Chr3g0144451 | 35.135 | 148 | 86 | 5 | 223 | 360 | 128 | 275 | 4.15e-16 | 77.8 |
| Msa1173290 | MtrunA17_Chr4g0034721 | 33.333 | 150 | 88 | 6 | 223 | 360 | 427 | 576 | 9.78e-15 | 75.5 |
| Msa1173290 | MtrunA17_Chr4g0034451 | 34.000 | 150 | 87 | 8 | 223 | 360 | 377 | 526 | 3.01e-14 | 73.9 |
| Msa1173290 | MtrunA17_Chr4g0076231 | 28.188 | 149 | 98 | 4 | 223 | 362 | 12 | 160 | 8.81e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1173290 | AT5G25610.1 | 42.361 | 144 | 75 | 5 | 223 | 358 | 246 | 389 | 2.63e-30 | 120 |
| Msa1173290 | AT1G49320.1 | 32.680 | 153 | 88 | 7 | 222 | 359 | 126 | 278 | 1.30e-14 | 73.9 |
| Msa1173290 | AT1G70370.2 | 29.730 | 148 | 96 | 4 | 223 | 362 | 479 | 626 | 1.39e-12 | 69.3 |
| Msa1173290 | AT1G70370.1 | 29.730 | 148 | 96 | 4 | 223 | 362 | 479 | 626 | 1.39e-12 | 69.3 |
Find 70 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCAAACCAAATGATAATTT+TGG | 0.085839 | 8_1:-3670616 | Msa1173290:CDS |
| GTTGAACATCTGAATGTTTA+TGG | 0.183060 | 8_1:+3670836 | None:intergenic |
| AGAACTTCATAGAGCATATT+AGG | 0.203878 | 8_1:+3670031 | None:intergenic |
| GATAAACCAAACGATAATAT+TGG | 0.268790 | 8_1:-3670526 | Msa1173290:CDS |
| AACTTCTGTAGCACATAAAT+TGG | 0.273421 | 8_1:-3670410 | Msa1173290:CDS |
| GTGGAGGAAGTGAGGAAAAT+AGG | 0.284501 | 8_1:-3670214 | Msa1173290:CDS |
| CCCAAAATTATCATTTGGTT+TGG | 0.311201 | 8_1:+3670615 | None:intergenic |
| TGGCAAACGGGGACAGTTCC+AGG | 0.325210 | 8_1:+3669998 | None:intergenic |
| TCTCTTCTCCTATAGCTGAT+TGG | 0.337940 | 8_1:+3670347 | None:intergenic |
| CCTCCACCACATATTGGTTA+TGG | 0.338011 | 8_1:+3670230 | None:intergenic |
| TCACTTCCTCCACCACATAT+TGG | 0.352694 | 8_1:+3670224 | None:intergenic |
| TGGTTTGGCTATTTCTTCTT+CGG | 0.358722 | 8_1:+3670630 | None:intergenic |
| AGAATCCCAAAATTATCATT+TGG | 0.368127 | 8_1:+3670610 | None:intergenic |
| GGAACCAGTGTGCCTATTAA+AGG | 0.380879 | 8_1:-3670934 | Msa1173290:CDS |
| GCAAAAGCAAGTCAACCTTT+TGG | 0.382257 | 8_1:-3670733 | Msa1173290:CDS |
| ATTCTTTCCAAGCTTTGAAA+TGG | 0.382606 | 8_1:+3670285 | None:intergenic |
| ACAATCAAAGGGACATTTAC+CGG | 0.389225 | 8_1:-3670809 | Msa1173290:CDS |
| TTCTCGTCTTGACCTTTAAT+AGG | 0.393806 | 8_1:+3670922 | None:intergenic |
| ATAATCCCAATATTATCGTT+TGG | 0.396432 | 8_1:+3670520 | None:intergenic |
| AAGTCGTCGTCGCGTTGATC+TGG | 0.400613 | 8_1:+3670134 | None:intergenic |
| TTTGAACATGACCTCTATCC+TGG | 0.405378 | 8_1:-3670880 | Msa1173290:CDS |
| TACCTCAACTGAAGACGAAA+TGG | 0.408342 | 8_1:-3670548 | Msa1173290:CDS |
| GTCAAGACGAGAAGCAATAC+TGG | 0.411820 | 8_1:-3670912 | Msa1173290:CDS |
| ATAAACCAAACGATAATATT+GGG | 0.414213 | 8_1:-3670525 | Msa1173290:CDS |
| GTCCCCGTTTGCCATTTCAT+TGG | 0.423156 | 8_1:-3669989 | Msa1173290:CDS |
| CACCATATGTTAATTCCAAA+AGG | 0.424973 | 8_1:+3670718 | None:intergenic |
| TAGCTTTGTTGCCAATGAAA+TGG | 0.425489 | 8_1:+3669978 | None:intergenic |
| TTGCCAATGAAATGGCAAAC+GGG | 0.434579 | 8_1:+3669986 | None:intergenic |
| TTGGCAACAAAGCTATTGCT+TGG | 0.442688 | 8_1:-3669970 | Msa1173290:CDS |
| GACTCGCTCACAACATCGTT+GGG | 0.450233 | 8_1:+3669944 | None:intergenic |
| TTGGCTATTTCTTCTTCGGT+TGG | 0.453372 | 8_1:+3670634 | None:intergenic |
| TTGAACATCTGAATGTTTAT+GGG | 0.455900 | 8_1:+3670837 | None:intergenic |
| GTCCCATTGGTGGCCTCTGA+TGG | 0.460470 | 8_1:-3670106 | Msa1173290:CDS |
| GTTGCCAATGAAATGGCAAA+CGG | 0.479257 | 8_1:+3669985 | None:intergenic |
| CACATTCTTCACAGCTATTG+TGG | 0.482566 | 8_1:-3670373 | Msa1173290:CDS |
| TGTGGGAACCAATCAGCTAT+AGG | 0.484994 | 8_1:-3670355 | Msa1173290:CDS |
| GAGATGGTCTAGAATCTAGA+TGG | 0.497797 | 8_1:+3669904 | None:intergenic |
| GAAGTTCTCAAAGTCAAGCC+TGG | 0.500864 | 8_1:-3670016 | Msa1173290:CDS |
| CAACGCGACGACGACTTACA+TGG | 0.501706 | 8_1:-3670128 | Msa1173290:CDS |
| ATATACGATTATCATAAGTT+CGG | 0.506894 | 8_1:-3670988 | Msa1173290:CDS |
| ACATTCTTCACAGCTATTGT+GGG | 0.507388 | 8_1:-3670372 | Msa1173290:CDS |
| TGGCAACAAAGCTATTGCTT+GGG | 0.507858 | 8_1:-3669969 | Msa1173290:CDS |
| ATCCATTTCGTCTTCAGTTG+AGG | 0.510474 | 8_1:+3670546 | None:intergenic |
| GACTTACATGGTCCCATTGG+TGG | 0.514027 | 8_1:-3670116 | Msa1173290:CDS |
| CCACCATGATACAAGAGGTA+TGG | 0.515111 | 8_1:-3670056 | Msa1173290:CDS |
| TTTGGGATTCTCGTATGGAC+TGG | 0.516241 | 8_1:-3670598 | Msa1173290:CDS |
| TGTTCAACCATCACAATCAA+AGG | 0.518549 | 8_1:-3670821 | Msa1173290:CDS |
| TATGATTCTTCCGTATGTGT+TGG | 0.524078 | 8_1:-3671022 | Msa1173290:CDS |
| GATCCATACCTCTTGTATCA+TGG | 0.527661 | 8_1:+3670053 | None:intergenic |
| TTCCATCAGAGGCCACCAAT+GGG | 0.528807 | 8_1:+3670104 | None:intergenic |
| GTTCCATCAGAGGCCACCAA+TGG | 0.539101 | 8_1:+3670103 | None:intergenic |
| AAATGTCCCTTTGATTGTGA+TGG | 0.539817 | 8_1:+3670814 | None:intergenic |
| GGACTCGCTCACAACATCGT+TGG | 0.544354 | 8_1:+3669943 | None:intergenic |
| AATCGATATTCGAGTTCGAA+TGG | 0.549093 | 8_1:+3670471 | None:intergenic |
| CCATAACCAATATGTGGTGG+AGG | 0.557428 | 8_1:-3670230 | Msa1173290:CDS |
| GACGACTTACATGGTCCCAT+TGG | 0.562984 | 8_1:-3670119 | Msa1173290:CDS |
| TCGTCGTCGCGTTGATCTGG+TGG | 0.566424 | 8_1:+3670137 | None:intergenic |
| TTTAGATTTAGTTCCATCAG+AGG | 0.572728 | 8_1:+3670093 | None:intergenic |
| GTTCAACCATCACAATCAAA+GGG | 0.579182 | 8_1:-3670820 | Msa1173290:CDS |
| GAATCTAGATGGCACAAGGA+TGG | 0.598117 | 8_1:+3669915 | None:intergenic |
| TTACTAGTAACCAACACATA+CGG | 0.620776 | 8_1:+3671012 | None:intergenic |
| TCAAAGCCATAACCAATATG+TGG | 0.621401 | 8_1:-3670236 | Msa1173290:CDS |
| AATATGTGGTGGAGGAAGTG+AGG | 0.624031 | 8_1:-3670222 | Msa1173290:CDS |
| ATTTGCCACCATGATACAAG+AGG | 0.631842 | 8_1:-3670061 | Msa1173290:CDS |
| GATGGCACAAGGATGGTCAT+CGG | 0.631882 | 8_1:+3669922 | None:intergenic |
| TGCCAATGAAATGGCAAACG+GGG | 0.634412 | 8_1:+3669987 | None:intergenic |
| AAGCCATAACCAATATGTGG+TGG | 0.637454 | 8_1:-3670233 | Msa1173290:CDS |
| TTGACCTTTAATAGGCACAC+TGG | 0.639214 | 8_1:+3670930 | None:intergenic |
| TCTAGAATCTAGATGGCACA+AGG | 0.668341 | 8_1:+3669911 | None:intergenic |
| CCATACCTCTTGTATCATGG+TGG | 0.689437 | 8_1:+3670056 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAGCAAATCAATTTTT+TGG | - | chr8_1:3670156-3670175 | Msa1173290:CDS | 15.0% |
| !!! | ATAATATTGGGATTATTTTA+TGG | - | chr8_1:3670427-3670446 | Msa1173290:CDS | 15.0% |
| !!! | AAAAAAGCAAATCAATTTTT+TGG | - | chr8_1:3670156-3670175 | Msa1173290:CDS | 15.0% |
| !!! | ATAATATTGGGATTATTTTA+TGG | - | chr8_1:3670427-3670446 | Msa1173290:CDS | 15.0% |
| !! | ATATACGATTATCATAAGTT+CGG | - | chr8_1:3669952-3669971 | Msa1173290:CDS | 20.0% |
| !! | ATAAACCAAACGATAATATT+GGG | - | chr8_1:3670415-3670434 | Msa1173290:CDS | 20.0% |
| !! | TCATAGAATGAATCTAAAAA+AGG | - | chr8_1:3670767-3670786 | Msa1173290:CDS | 20.0% |
| !! | ATATACGATTATCATAAGTT+CGG | - | chr8_1:3669952-3669971 | Msa1173290:CDS | 20.0% |
| !! | ATAAACCAAACGATAATATT+GGG | - | chr8_1:3670415-3670434 | Msa1173290:CDS | 20.0% |
| !! | TCATAGAATGAATCTAAAAA+AGG | - | chr8_1:3670767-3670786 | Msa1173290:CDS | 20.0% |
| ! | TTGAACATCTGAATGTTTAT+GGG | + | chr8_1:3670106-3670125 | None:intergenic | 25.0% |
| !!! | AATTGATTTGCTTTTTTGAC+CGG | + | chr8_1:3670153-3670172 | None:intergenic | 25.0% |
| !!! | AACCTTTTGGAATTAACATA+TGG | - | chr8_1:3670220-3670239 | Msa1173290:CDS | 25.0% |
| !!! | TTTTGGAATTAACATATGGT+GGG | - | chr8_1:3670224-3670243 | Msa1173290:CDS | 25.0% |
| ! | GAAAAACCAAAAATACTGTT+AGG | - | chr8_1:3670261-3670280 | Msa1173290:CDS | 25.0% |
| !! | CCAAACCAAATGATAATTTT+GGG | - | chr8_1:3670325-3670344 | Msa1173290:CDS | 25.0% |
| ! | AGAATCCCAAAATTATCATT+TGG | + | chr8_1:3670333-3670352 | None:intergenic | 25.0% |
| ! | GATAAACCAAACGATAATAT+TGG | - | chr8_1:3670414-3670433 | Msa1173290:CDS | 25.0% |
| ! | ATAATCCCAATATTATCGTT+TGG | + | chr8_1:3670423-3670442 | None:intergenic | 25.0% |
| ! | AGAATGAATCTAAAAAAGGT+TGG | - | chr8_1:3670771-3670790 | Msa1173290:CDS | 25.0% |
| ! | TTGAACATCTGAATGTTTAT+GGG | + | chr8_1:3670106-3670125 | None:intergenic | 25.0% |
| !!! | AATTGATTTGCTTTTTTGAC+CGG | + | chr8_1:3670153-3670172 | None:intergenic | 25.0% |
| !!! | AACCTTTTGGAATTAACATA+TGG | - | chr8_1:3670220-3670239 | Msa1173290:CDS | 25.0% |
| !!! | TTTTGGAATTAACATATGGT+GGG | - | chr8_1:3670224-3670243 | Msa1173290:CDS | 25.0% |
| ! | GAAAAACCAAAAATACTGTT+AGG | - | chr8_1:3670261-3670280 | Msa1173290:CDS | 25.0% |
| !! | CCAAACCAAATGATAATTTT+GGG | - | chr8_1:3670325-3670344 | Msa1173290:CDS | 25.0% |
| ! | AGAATCCCAAAATTATCATT+TGG | + | chr8_1:3670333-3670352 | None:intergenic | 25.0% |
| ! | GATAAACCAAACGATAATAT+TGG | - | chr8_1:3670414-3670433 | Msa1173290:CDS | 25.0% |
| ! | ATAATCCCAATATTATCGTT+TGG | + | chr8_1:3670423-3670442 | None:intergenic | 25.0% |
| ! | AGAATGAATCTAAAAAAGGT+TGG | - | chr8_1:3670771-3670790 | Msa1173290:CDS | 25.0% |
| TTACTAGTAACCAACACATA+CGG | + | chr8_1:3669931-3669950 | None:intergenic | 30.0% | |
| ! | CATAAGTTCGGAATTTTGTT+TGG | - | chr8_1:3669964-3669983 | Msa1173290:CDS | 30.0% |
| !!! | GGAATTTTGTTTGGTTTTGA+TGG | - | chr8_1:3669973-3669992 | Msa1173290:CDS | 30.0% |
| GTTGAACATCTGAATGTTTA+TGG | + | chr8_1:3670107-3670126 | None:intergenic | 30.0% | |
| !!! | AATTTTTTGGAACTCGCAAA+TGG | - | chr8_1:3670169-3670188 | Msa1173290:CDS | 30.0% |
| CACCATATGTTAATTCCAAA+AGG | + | chr8_1:3670225-3670244 | None:intergenic | 30.0% | |
| !!! | CTTTTGGAATTAACATATGG+TGG | - | chr8_1:3670223-3670242 | Msa1173290:CDS | 30.0% |
| ! | TGAGTTCCTAACAGTATTTT+TGG | + | chr8_1:3670270-3670289 | None:intergenic | 30.0% |
| ! | GCCAAACCAAATGATAATTT+TGG | - | chr8_1:3670324-3670343 | Msa1173290:CDS | 30.0% |
| CCCAAAATTATCATTTGGTT+TGG | + | chr8_1:3670328-3670347 | None:intergenic | 30.0% | |
| !!! | ATAATTTTGGGATTCTCGTA+TGG | - | chr8_1:3670337-3670356 | Msa1173290:CDS | 30.0% |
| !! | ATTGGGATTATTTTATGGAC+TGG | - | chr8_1:3670432-3670451 | Msa1173290:CDS | 30.0% |
| AACTTCTGTAGCACATAAAT+TGG | - | chr8_1:3670530-3670549 | Msa1173290:CDS | 30.0% | |
| !! | AATTTTGCCATTTCAAAGCT+TGG | - | chr8_1:3670648-3670667 | Msa1173290:CDS | 30.0% |
| !! | ATTCTTTCCAAGCTTTGAAA+TGG | + | chr8_1:3670658-3670677 | None:intergenic | 30.0% |
| ! | TTTAGATTTAGTTCCATCAG+AGG | + | chr8_1:3670850-3670869 | None:intergenic | 30.0% |
| AGAACTTCATAGAGCATATT+AGG | + | chr8_1:3670912-3670931 | None:intergenic | 30.0% | |
| TTACTAGTAACCAACACATA+CGG | + | chr8_1:3669931-3669950 | None:intergenic | 30.0% | |
| ! | CATAAGTTCGGAATTTTGTT+TGG | - | chr8_1:3669964-3669983 | Msa1173290:CDS | 30.0% |
| !!! | GGAATTTTGTTTGGTTTTGA+TGG | - | chr8_1:3669973-3669992 | Msa1173290:CDS | 30.0% |
| GTTGAACATCTGAATGTTTA+TGG | + | chr8_1:3670107-3670126 | None:intergenic | 30.0% | |
| !!! | AATTTTTTGGAACTCGCAAA+TGG | - | chr8_1:3670169-3670188 | Msa1173290:CDS | 30.0% |
| CACCATATGTTAATTCCAAA+AGG | + | chr8_1:3670225-3670244 | None:intergenic | 30.0% | |
| !!! | CTTTTGGAATTAACATATGG+TGG | - | chr8_1:3670223-3670242 | Msa1173290:CDS | 30.0% |
| ! | TGAGTTCCTAACAGTATTTT+TGG | + | chr8_1:3670270-3670289 | None:intergenic | 30.0% |
| ! | GCCAAACCAAATGATAATTT+TGG | - | chr8_1:3670324-3670343 | Msa1173290:CDS | 30.0% |
| CCCAAAATTATCATTTGGTT+TGG | + | chr8_1:3670328-3670347 | None:intergenic | 30.0% | |
| !!! | ATAATTTTGGGATTCTCGTA+TGG | - | chr8_1:3670337-3670356 | Msa1173290:CDS | 30.0% |
| !! | ATTGGGATTATTTTATGGAC+TGG | - | chr8_1:3670432-3670451 | Msa1173290:CDS | 30.0% |
| AACTTCTGTAGCACATAAAT+TGG | - | chr8_1:3670530-3670549 | Msa1173290:CDS | 30.0% | |
| !! | AATTTTGCCATTTCAAAGCT+TGG | - | chr8_1:3670648-3670667 | Msa1173290:CDS | 30.0% |
| !! | ATTCTTTCCAAGCTTTGAAA+TGG | + | chr8_1:3670658-3670677 | None:intergenic | 30.0% |
| ! | TTTAGATTTAGTTCCATCAG+AGG | + | chr8_1:3670850-3670869 | None:intergenic | 30.0% |
| AGAACTTCATAGAGCATATT+AGG | + | chr8_1:3670912-3670931 | None:intergenic | 30.0% | |
| TTCTCGTCTTGACCTTTAAT+AGG | + | chr8_1:3670021-3670040 | None:intergenic | 35.0% | |
| !!! | TCATTTTTTTGCCAGGATAG+AGG | + | chr8_1:3670074-3670093 | None:intergenic | 35.0% |
| TGTTCAACCATCACAATCAA+AGG | - | chr8_1:3670119-3670138 | Msa1173290:CDS | 35.0% | |
| GTTCAACCATCACAATCAAA+GGG | - | chr8_1:3670120-3670139 | Msa1173290:CDS | 35.0% | |
| AAATGTCCCTTTGATTGTGA+TGG | + | chr8_1:3670129-3670148 | None:intergenic | 35.0% | |
| ACAATCAAAGGGACATTTAC+CGG | - | chr8_1:3670131-3670150 | Msa1173290:CDS | 35.0% | |
| !! | TGGTTTGGCTATTTCTTCTT+CGG | + | chr8_1:3670313-3670332 | None:intergenic | 35.0% |
| ! | AATCGATATTCGAGTTCGAA+TGG | + | chr8_1:3670472-3670491 | None:intergenic | 35.0% |
| ACATTCTTCACAGCTATTGT+GGG | - | chr8_1:3670568-3670587 | Msa1173290:CDS | 35.0% | |
| TCAAAGCCATAACCAATATG+TGG | - | chr8_1:3670704-3670723 | Msa1173290:CDS | 35.0% | |
| !! | TAGCTTTGTTGCCAATGAAA+TGG | + | chr8_1:3670965-3670984 | None:intergenic | 35.0% |
| TTCTCGTCTTGACCTTTAAT+AGG | + | chr8_1:3670021-3670040 | None:intergenic | 35.0% | |
| !!! | TCATTTTTTTGCCAGGATAG+AGG | + | chr8_1:3670074-3670093 | None:intergenic | 35.0% |
| TGTTCAACCATCACAATCAA+AGG | - | chr8_1:3670119-3670138 | Msa1173290:CDS | 35.0% | |
| GTTCAACCATCACAATCAAA+GGG | - | chr8_1:3670120-3670139 | Msa1173290:CDS | 35.0% | |
| AAATGTCCCTTTGATTGTGA+TGG | + | chr8_1:3670129-3670148 | None:intergenic | 35.0% | |
| ACAATCAAAGGGACATTTAC+CGG | - | chr8_1:3670131-3670150 | Msa1173290:CDS | 35.0% | |
| !! | TGGTTTGGCTATTTCTTCTT+CGG | + | chr8_1:3670313-3670332 | None:intergenic | 35.0% |
| ! | AATCGATATTCGAGTTCGAA+TGG | + | chr8_1:3670472-3670491 | None:intergenic | 35.0% |
| ACATTCTTCACAGCTATTGT+GGG | - | chr8_1:3670568-3670587 | Msa1173290:CDS | 35.0% | |
| TCAAAGCCATAACCAATATG+TGG | - | chr8_1:3670704-3670723 | Msa1173290:CDS | 35.0% | |
| !! | TAGCTTTGTTGCCAATGAAA+TGG | + | chr8_1:3670965-3670984 | None:intergenic | 35.0% |
| TTGACCTTTAATAGGCACAC+TGG | + | chr8_1:3670013-3670032 | None:intergenic | 40.0% | |
| TTTGAACATGACCTCTATCC+TGG | - | chr8_1:3670060-3670079 | Msa1173290:CDS | 40.0% | |
| TCCTGGCAAAAAAATGAGCT+TGG | - | chr8_1:3670077-3670096 | Msa1173290:CDS | 40.0% | |
| CCTGGCAAAAAAATGAGCTT+GGG | - | chr8_1:3670078-3670097 | Msa1173290:CDS | 40.0% | |
| ! | GCAAAAGCAAGTCAACCTTT+TGG | - | chr8_1:3670207-3670226 | Msa1173290:CDS | 40.0% |
| !! | TTGGCTATTTCTTCTTCGGT+TGG | + | chr8_1:3670309-3670328 | None:intergenic | 40.0% |
| TACCTCAACTGAAGACGAAA+TGG | - | chr8_1:3670392-3670411 | Msa1173290:CDS | 40.0% | |
| ATCCATTTCGTCTTCAGTTG+AGG | + | chr8_1:3670397-3670416 | None:intergenic | 40.0% | |
| CACATTCTTCACAGCTATTG+TGG | - | chr8_1:3670567-3670586 | Msa1173290:CDS | 40.0% | |
| TCTCTTCTCCTATAGCTGAT+TGG | + | chr8_1:3670596-3670615 | None:intergenic | 40.0% | |
| AAGCCATAACCAATATGTGG+TGG | - | chr8_1:3670707-3670726 | Msa1173290:CDS | 40.0% | |
| ATTTGCCACCATGATACAAG+AGG | - | chr8_1:3670879-3670898 | Msa1173290:CDS | 40.0% | |
| GATCCATACCTCTTGTATCA+TGG | + | chr8_1:3670890-3670909 | None:intergenic | 40.0% | |
| TTGCCAATGAAATGGCAAAC+GGG | + | chr8_1:3670957-3670976 | None:intergenic | 40.0% | |
| GTTGCCAATGAAATGGCAAA+CGG | + | chr8_1:3670958-3670977 | None:intergenic | 40.0% | |
| TTGGCAACAAAGCTATTGCT+TGG | - | chr8_1:3670970-3670989 | Msa1173290:CDS | 40.0% | |
| TGGCAACAAAGCTATTGCTT+GGG | - | chr8_1:3670971-3670990 | Msa1173290:CDS | 40.0% | |
| TTGACCTTTAATAGGCACAC+TGG | + | chr8_1:3670013-3670032 | None:intergenic | 40.0% | |
| TTTGAACATGACCTCTATCC+TGG | - | chr8_1:3670060-3670079 | Msa1173290:CDS | 40.0% | |
| TCCTGGCAAAAAAATGAGCT+TGG | - | chr8_1:3670077-3670096 | Msa1173290:CDS | 40.0% | |
| CCTGGCAAAAAAATGAGCTT+GGG | - | chr8_1:3670078-3670097 | Msa1173290:CDS | 40.0% | |
| ! | GCAAAAGCAAGTCAACCTTT+TGG | - | chr8_1:3670207-3670226 | Msa1173290:CDS | 40.0% |
| !! | TTGGCTATTTCTTCTTCGGT+TGG | + | chr8_1:3670309-3670328 | None:intergenic | 40.0% |
| TACCTCAACTGAAGACGAAA+TGG | - | chr8_1:3670392-3670411 | Msa1173290:CDS | 40.0% | |
| ATCCATTTCGTCTTCAGTTG+AGG | + | chr8_1:3670397-3670416 | None:intergenic | 40.0% | |
| CACATTCTTCACAGCTATTG+TGG | - | chr8_1:3670567-3670586 | Msa1173290:CDS | 40.0% | |
| TCTCTTCTCCTATAGCTGAT+TGG | + | chr8_1:3670596-3670615 | None:intergenic | 40.0% | |
| AAGCCATAACCAATATGTGG+TGG | - | chr8_1:3670707-3670726 | Msa1173290:CDS | 40.0% | |
| ATTTGCCACCATGATACAAG+AGG | - | chr8_1:3670879-3670898 | Msa1173290:CDS | 40.0% | |
| GATCCATACCTCTTGTATCA+TGG | + | chr8_1:3670890-3670909 | None:intergenic | 40.0% | |
| TTGCCAATGAAATGGCAAAC+GGG | + | chr8_1:3670957-3670976 | None:intergenic | 40.0% | |
| GTTGCCAATGAAATGGCAAA+CGG | + | chr8_1:3670958-3670977 | None:intergenic | 40.0% | |
| TTGGCAACAAAGCTATTGCT+TGG | - | chr8_1:3670970-3670989 | Msa1173290:CDS | 40.0% | |
| TGGCAACAAAGCTATTGCTT+GGG | - | chr8_1:3670971-3670990 | Msa1173290:CDS | 40.0% | |
| GGAACCAGTGTGCCTATTAA+AGG | - | chr8_1:3670006-3670025 | Msa1173290:CDS | 45.0% | |
| GTCAAGACGAGAAGCAATAC+TGG | - | chr8_1:3670028-3670047 | Msa1173290:CDS | 45.0% | |
| !!! | CCCAAGCTCATTTTTTTGCC+AGG | + | chr8_1:3670081-3670100 | None:intergenic | 45.0% |
| ! | TTTGGGATTCTCGTATGGAC+TGG | - | chr8_1:3670342-3670361 | Msa1173290:CDS | 45.0% |
| TGTGGGAACCAATCAGCTAT+AGG | - | chr8_1:3670585-3670604 | Msa1173290:CDS | 45.0% | |
| ! | CCTCCACCACATATTGGTTA+TGG | + | chr8_1:3670713-3670732 | None:intergenic | 45.0% |
| CCATAACCAATATGTGGTGG+AGG | - | chr8_1:3670710-3670729 | Msa1173290:CDS | 45.0% | |
| TCACTTCCTCCACCACATAT+TGG | + | chr8_1:3670719-3670738 | None:intergenic | 45.0% | |
| ! | AATATGTGGTGGAGGAAGTG+AGG | - | chr8_1:3670718-3670737 | Msa1173290:CDS | 45.0% |
| GTGGAGGAAGTGAGGAAAAT+AGG | - | chr8_1:3670726-3670745 | Msa1173290:CDS | 45.0% | |
| CCATACCTCTTGTATCATGG+TGG | + | chr8_1:3670887-3670906 | None:intergenic | 45.0% | |
| CCACCATGATACAAGAGGTA+TGG | - | chr8_1:3670884-3670903 | Msa1173290:CDS | 45.0% | |
| GAAGTTCTCAAAGTCAAGCC+TGG | - | chr8_1:3670924-3670943 | Msa1173290:CDS | 45.0% | |
| TGCCAATGAAATGGCAAACG+GGG | + | chr8_1:3670956-3670975 | None:intergenic | 45.0% | |
| GGAACCAGTGTGCCTATTAA+AGG | - | chr8_1:3670006-3670025 | Msa1173290:CDS | 45.0% | |
| GTCAAGACGAGAAGCAATAC+TGG | - | chr8_1:3670028-3670047 | Msa1173290:CDS | 45.0% | |
| !!! | CCCAAGCTCATTTTTTTGCC+AGG | + | chr8_1:3670081-3670100 | None:intergenic | 45.0% |
| ! | TTTGGGATTCTCGTATGGAC+TGG | - | chr8_1:3670342-3670361 | Msa1173290:CDS | 45.0% |
| TGTGGGAACCAATCAGCTAT+AGG | - | chr8_1:3670585-3670604 | Msa1173290:CDS | 45.0% | |
| ! | CCTCCACCACATATTGGTTA+TGG | + | chr8_1:3670713-3670732 | None:intergenic | 45.0% |
| CCATAACCAATATGTGGTGG+AGG | - | chr8_1:3670710-3670729 | Msa1173290:CDS | 45.0% | |
| TCACTTCCTCCACCACATAT+TGG | + | chr8_1:3670719-3670738 | None:intergenic | 45.0% | |
| ! | AATATGTGGTGGAGGAAGTG+AGG | - | chr8_1:3670718-3670737 | Msa1173290:CDS | 45.0% |
| GTGGAGGAAGTGAGGAAAAT+AGG | - | chr8_1:3670726-3670745 | Msa1173290:CDS | 45.0% | |
| CCATACCTCTTGTATCATGG+TGG | + | chr8_1:3670887-3670906 | None:intergenic | 45.0% | |
| CCACCATGATACAAGAGGTA+TGG | - | chr8_1:3670884-3670903 | Msa1173290:CDS | 45.0% | |
| GAAGTTCTCAAAGTCAAGCC+TGG | - | chr8_1:3670924-3670943 | Msa1173290:CDS | 45.0% | |
| TGCCAATGAAATGGCAAACG+GGG | + | chr8_1:3670956-3670975 | None:intergenic | 45.0% | |
| !!! | GGTTTTGATGGTGCAGAGAG+CGG | - | chr8_1:3669985-3670004 | Msa1173290:CDS | 50.0% |
| GACGACTTACATGGTCCCAT+TGG | - | chr8_1:3670821-3670840 | Msa1173290:CDS | 50.0% | |
| GACTTACATGGTCCCATTGG+TGG | - | chr8_1:3670824-3670843 | Msa1173290:CDS | 50.0% | |
| TTCCATCAGAGGCCACCAAT+GGG | + | chr8_1:3670839-3670858 | None:intergenic | 50.0% | |
| ! | GTCCCCGTTTGCCATTTCAT+TGG | - | chr8_1:3670951-3670970 | Msa1173290:CDS | 50.0% |
| GACTCGCTCACAACATCGTT+GGG | + | chr8_1:3670999-3671018 | None:intergenic | 50.0% | |
| GATGGCACAAGGATGGTCAT+CGG | + | chr8_1:3671021-3671040 | None:intergenic | 50.0% | |
| !!! | GGTTTTGATGGTGCAGAGAG+CGG | - | chr8_1:3669985-3670004 | Msa1173290:CDS | 50.0% |
| GACGACTTACATGGTCCCAT+TGG | - | chr8_1:3670821-3670840 | Msa1173290:CDS | 50.0% | |
| GACTTACATGGTCCCATTGG+TGG | - | chr8_1:3670824-3670843 | Msa1173290:CDS | 50.0% | |
| TTCCATCAGAGGCCACCAAT+GGG | + | chr8_1:3670839-3670858 | None:intergenic | 50.0% | |
| ! | GTCCCCGTTTGCCATTTCAT+TGG | - | chr8_1:3670951-3670970 | Msa1173290:CDS | 50.0% |
| GACTCGCTCACAACATCGTT+GGG | + | chr8_1:3670999-3671018 | None:intergenic | 50.0% | |
| GATGGCACAAGGATGGTCAT+CGG | + | chr8_1:3671021-3671040 | None:intergenic | 50.0% | |
| ! | AAGTCGTCGTCGCGTTGATC+TGG | + | chr8_1:3670809-3670828 | None:intergenic | 55.0% |
| CAACGCGACGACGACTTACA+TGG | - | chr8_1:3670812-3670831 | Msa1173290:CDS | 55.0% | |
| GTTCCATCAGAGGCCACCAA+TGG | + | chr8_1:3670840-3670859 | None:intergenic | 55.0% | |
| GGACTCGCTCACAACATCGT+TGG | + | chr8_1:3671000-3671019 | None:intergenic | 55.0% | |
| ! | AAGTCGTCGTCGCGTTGATC+TGG | + | chr8_1:3670809-3670828 | None:intergenic | 55.0% |
| CAACGCGACGACGACTTACA+TGG | - | chr8_1:3670812-3670831 | Msa1173290:CDS | 55.0% | |
| GTTCCATCAGAGGCCACCAA+TGG | + | chr8_1:3670840-3670859 | None:intergenic | 55.0% | |
| GGACTCGCTCACAACATCGT+TGG | + | chr8_1:3671000-3671019 | None:intergenic | 55.0% | |
| ! | TCGTCGTCGCGTTGATCTGG+TGG | + | chr8_1:3670806-3670825 | None:intergenic | 60.0% |
| ! | GTCCCATTGGTGGCCTCTGA+TGG | - | chr8_1:3670834-3670853 | Msa1173290:CDS | 60.0% |
| TGGCAAACGGGGACAGTTCC+AGG | + | chr8_1:3670945-3670964 | None:intergenic | 60.0% | |
| ! | TCGTCGTCGCGTTGATCTGG+TGG | + | chr8_1:3670806-3670825 | None:intergenic | 60.0% |
| ! | GTCCCATTGGTGGCCTCTGA+TGG | - | chr8_1:3670834-3670853 | Msa1173290:CDS | 60.0% |
| TGGCAAACGGGGACAGTTCC+AGG | + | chr8_1:3670945-3670964 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 3669919 | 3671043 | 3669919 | ID=Msa1173290;Name=Msa1173290 |
| chr8_1 | mRNA | 3669919 | 3671043 | 3669919 | ID=Msa1173290-mRNA-1;Parent=Msa1173290;Name=Msa1173290-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|-1|0|1|-1|1|1|0|374 |
| chr8_1 | exon | 3669919 | 3671043 | 3669919 | ID=Msa1173290-mRNA-1:exon:1277;Parent=Msa1173290-mRNA-1 |
| chr8_1 | CDS | 3669919 | 3671043 | 3669919 | ID=Msa1173290-mRNA-1:cds;Parent=Msa1173290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
