Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0207970 | XP_013442068.1 | 88.500 | 200 | 18 | 2 | 1 | 196 | 1 | 199 | 4.99e-103 | 305 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0207970 | sp|P29602|CPC_CUCSA | 49.057 | 106 | 50 | 4 | 28 | 130 | 5 | 109 | 2.92e-23 | 93.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0207970 | A0A072TGI1 | 88.500 | 200 | 18 | 2 | 1 | 196 | 1 | 199 | 2.38e-103 | 305 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0207970 | 0.808196 | 3.488154e-50 | -8.615850e-47 |
| Msa0030800 | Msa0207970 | 0.804963 | 1.678363e-49 | -8.615850e-47 |
| Msa0031650 | Msa0207970 | 0.815001 | 1.156309e-51 | -8.615850e-47 |
| Msa0036580 | Msa0207970 | 0.808366 | 3.208450e-50 | -8.615850e-47 |
| Msa0046680 | Msa0207970 | 0.823365 | 1.440643e-53 | -8.615850e-47 |
| Msa0059880 | Msa0207970 | 0.830988 | 2.152927e-55 | -8.615850e-47 |
| Msa0093530 | Msa0207970 | 0.841398 | 4.868286e-58 | -8.615850e-47 |
| Msa0107830 | Msa0207970 | 0.849191 | 3.788218e-60 | -8.615850e-47 |
| Msa0126960 | Msa0207970 | 0.839468 | 1.556313e-57 | -8.615850e-47 |
| Msa0129290 | Msa0207970 | 0.839575 | 1.459472e-57 | -8.615850e-47 |
| Msa0139270 | Msa0207970 | 0.821864 | 3.218953e-53 | -8.615850e-47 |
| Msa0150910 | Msa0207970 | 0.828380 | 9.284556e-55 | -8.615850e-47 |
| Msa0150920 | Msa0207970 | 0.800425 | 1.450041e-48 | -8.615850e-47 |
| Msa0171740 | Msa0207970 | 0.827503 | 1.509340e-54 | -8.615850e-47 |
| Msa0176620 | Msa0207970 | 0.812566 | 3.974294e-51 | -8.615850e-47 |
| Msa0177550 | Msa0207970 | 0.801794 | 7.610858e-49 | -8.615850e-47 |
| Msa0196420 | Msa0207970 | 0.842000 | 3.377855e-58 | -8.615850e-47 |
| Msa0199860 | Msa0207970 | 0.855482 | 6.124379e-62 | -8.615850e-47 |
| Msa0200080 | Msa0207970 | 0.813348 | 2.678987e-51 | -8.615850e-47 |
| Msa0200090 | Msa0207970 | 0.846347 | 2.299458e-59 | -8.615850e-47 |
| Msa0207930 | Msa0207970 | 0.924771 | 4.509910e-90 | -8.615850e-47 |
| Msa0207970 | Msa0212550 | 0.810470 | 1.134237e-50 | -8.615850e-47 |
| Msa0207970 | Msa0214630 | 0.835470 | 1.647401e-56 | -8.615850e-47 |
| Msa0207970 | Msa0238330 | 0.842413 | 2.626206e-58 | -8.615850e-47 |
| Msa0207970 | Msa0242390 | 0.820678 | 6.042115e-53 | -8.615850e-47 |
| Msa0207970 | Msa0243970 | 0.807355 | 5.262604e-50 | -8.615850e-47 |
| Msa0207970 | Msa0255010 | 0.846792 | 1.738956e-59 | -8.615850e-47 |
| Msa0207970 | Msa0257930 | 0.813996 | 1.929048e-51 | -8.615850e-47 |
| Msa0207970 | Msa0266640 | 0.823875 | 1.094165e-53 | -8.615850e-47 |
| Msa0207970 | Msa0266650 | 0.841311 | 5.131058e-58 | -8.615850e-47 |
| Msa0207970 | Msa0267900 | 0.825637 | 4.205255e-54 | -8.615850e-47 |
| Msa0207970 | Msa0271700 | 0.829955 | 3.853704e-55 | -8.615850e-47 |
| Msa0207970 | Msa0271720 | 0.821786 | 3.354501e-53 | -8.615850e-47 |
| Msa0207970 | Msa0274260 | 0.835331 | 1.785586e-56 | -8.615850e-47 |
| Msa0207970 | Msa0275730 | 0.803593 | 3.237434e-49 | -8.615850e-47 |
| Msa0207970 | Msa0287720 | 0.814973 | 1.172463e-51 | -8.615850e-47 |
| Msa0207970 | Msa0291880 | 0.843291 | 1.533596e-58 | -8.615850e-47 |
| Msa0207970 | Msa0294090 | 0.824339 | 8.514753e-54 | -8.615850e-47 |
| Msa0207970 | Msa0296930 | 0.807231 | 5.591193e-50 | -8.615850e-47 |
| Msa0207970 | Msa0316230 | 0.851628 | 7.840745e-61 | -8.615850e-47 |
| Msa0207970 | Msa0318370 | 0.819386 | 1.193498e-52 | -8.615850e-47 |
| Msa0207970 | Msa0320130 | 0.825134 | 5.532455e-54 | -8.615850e-47 |
| Msa0207970 | Msa0320140 | 0.827159 | 1.824541e-54 | -8.615850e-47 |
| Msa0207970 | Msa0324810 | 0.809183 | 2.146413e-50 | -8.615850e-47 |
| Msa0207970 | Msa0346170 | 0.846343 | 2.305884e-59 | -8.615850e-47 |
| Msa0207970 | Msa0353010 | 0.825460 | 4.631515e-54 | -8.615850e-47 |
| Msa0207970 | Msa0356410 | 0.800669 | 1.292904e-48 | -8.615850e-47 |
| Msa0207970 | Msa0378240 | 0.824988 | 5.987463e-54 | -8.615850e-47 |
| Msa0207970 | Msa0390200 | 0.842166 | 3.051673e-58 | -8.615850e-47 |
| Msa0207970 | Msa0393900 | 0.817227 | 3.678714e-52 | -8.615850e-47 |
| Msa0207970 | Msa0397200 | 0.817461 | 3.259056e-52 | -8.615850e-47 |
| Msa0207970 | Msa0398690 | 0.805795 | 1.123553e-49 | -8.615850e-47 |
| Msa0207970 | Msa0400010 | 0.801058 | 1.077120e-48 | -8.615850e-47 |
| Msa0207970 | Msa0420890 | 0.819542 | 1.099848e-52 | -8.615850e-47 |
| Msa0207970 | Msa0421080 | 0.841725 | 3.991351e-58 | -8.615850e-47 |
| Msa0207970 | Msa0438520 | 0.816405 | 5.623577e-52 | -8.615850e-47 |
| Msa0207970 | Msa0445530 | 0.817614 | 3.009290e-52 | -8.615850e-47 |
| Msa0207970 | Msa0447160 | 0.801063 | 1.074446e-48 | -8.615850e-47 |
| Msa0207970 | Msa0464310 | 0.805239 | 1.469263e-49 | -8.615850e-47 |
| Msa0207970 | Msa0466850 | 0.823811 | 1.132989e-53 | -8.615850e-47 |
| Msa0207970 | Msa0470350 | 0.812837 | 3.468042e-51 | -8.615850e-47 |
| Msa0207970 | Msa0485290 | 0.811535 | 6.668926e-51 | -8.615850e-47 |
| Msa0207970 | Msa0489370 | 0.821482 | 3.943842e-53 | -8.615850e-47 |
| Msa0207970 | Msa0491950 | 0.801102 | 1.054644e-48 | -8.615850e-47 |
| Msa0207970 | Msa0493710 | 0.804069 | 2.578190e-49 | -8.615850e-47 |
| Msa0207970 | Msa0510870 | 0.823970 | 1.039836e-53 | -8.615850e-47 |
| Msa0207970 | Msa0512280 | 0.805066 | 1.597395e-49 | -8.615850e-47 |
| Msa0207970 | Msa0513670 | 0.822191 | 2.702941e-53 | -8.615850e-47 |
| Msa0207970 | Msa0518340 | 0.801767 | 7.710190e-49 | -8.615850e-47 |
| Msa0207970 | Msa0533510 | 0.824568 | 7.520687e-54 | -8.615850e-47 |
| Msa0207970 | Msa0533520 | 0.842005 | 3.366753e-58 | -8.615850e-47 |
| Msa0207970 | Msa0535570 | 0.808995 | 2.354589e-50 | -8.615850e-47 |
| Msa0207970 | Msa0538440 | 0.809730 | 1.637709e-50 | -8.615850e-47 |
| Msa0207970 | Msa0538450 | 0.824734 | 6.876356e-54 | -8.615850e-47 |
| Msa0207970 | Msa0538520 | 0.819385 | 1.193986e-52 | -8.615850e-47 |
| Msa0207970 | Msa0538530 | 0.811617 | 6.400258e-51 | -8.615850e-47 |
| Msa0207970 | Msa0546760 | 0.806121 | 9.595016e-50 | -8.615850e-47 |
| Msa0207970 | Msa0548760 | 0.814559 | 1.448811e-51 | -8.615850e-47 |
| Msa0207970 | Msa0554660 | 0.805176 | 1.514969e-49 | -8.615850e-47 |
| Msa0207970 | Msa0565120 | 0.812947 | 3.280926e-51 | -8.615850e-47 |
| Msa0207970 | Msa0568110 | 0.827333 | 1.657745e-54 | -8.615850e-47 |
| Msa0207970 | Msa0570460 | 0.833656 | 4.705039e-56 | -8.615850e-47 |
| Msa0207970 | Msa0588040 | 0.802758 | 4.819157e-49 | -8.615850e-47 |
| Msa0207970 | Msa0588730 | 0.822417 | 2.395735e-53 | -8.615850e-47 |
| Msa0207970 | Msa0589720 | 0.811829 | 5.755539e-51 | -8.615850e-47 |
| Msa0207970 | Msa0589730 | 0.826839 | 2.175994e-54 | -8.615850e-47 |
| Msa0207970 | Msa0589750 | 0.802079 | 6.651440e-49 | -8.615850e-47 |
| Msa0207970 | Msa0594320 | 0.817736 | 2.824546e-52 | -8.615850e-47 |
| Msa0207970 | Msa0594330 | 0.825561 | 4.383521e-54 | -8.615850e-47 |
| Msa0207970 | Msa0597820 | 0.818536 | 1.862191e-52 | -8.615850e-47 |
| Msa0207970 | Msa0614960 | 0.801178 | 1.017627e-48 | -8.615850e-47 |
| Msa0207970 | Msa0628200 | 0.825182 | 5.387944e-54 | -8.615850e-47 |
| Msa0207970 | Msa0629030 | 0.853309 | 2.601660e-61 | -8.615850e-47 |
| Msa0207970 | Msa0629040 | 0.847984 | 8.182371e-60 | -8.615850e-47 |
| Msa0207970 | Msa0630130 | 0.815246 | 1.019746e-51 | -8.615850e-47 |
| Msa0207970 | Msa0634290 | 0.817045 | 4.041784e-52 | -8.615850e-47 |
| Msa0207970 | Msa0639400 | 0.807837 | 4.158101e-50 | -8.615850e-47 |
| Msa0207970 | Msa0639410 | 0.822037 | 2.934407e-53 | -8.615850e-47 |
| Msa0207970 | Msa0645100 | 0.806385 | 8.441095e-50 | -8.615850e-47 |
| Msa0207970 | Msa0645120 | 0.830827 | 2.358855e-55 | -8.615850e-47 |
| Msa0207970 | Msa0651820 | 0.806675 | 7.331737e-50 | -8.615850e-47 |
| Msa0207970 | Msa0657260 | 0.865346 | 6.310535e-65 | -8.615850e-47 |
| Msa0207970 | Msa0661330 | 0.801032 | 1.090097e-48 | -8.615850e-47 |
| Msa0207970 | Msa0666580 | 0.844970 | 5.433939e-59 | -8.615850e-47 |
| Msa0207970 | Msa0668210 | 0.824644 | 7.219604e-54 | -8.615850e-47 |
| Msa0207970 | Msa0668220 | 0.825065 | 5.744273e-54 | -8.615850e-47 |
| Msa0207970 | Msa0668230 | 0.817362 | 3.430539e-52 | -8.615850e-47 |
| Msa0207970 | Msa0670360 | 0.804069 | 2.578174e-49 | -8.615850e-47 |
| Msa0207970 | Msa0682410 | 0.802948 | 4.402663e-49 | -8.615850e-47 |
| Msa0207970 | Msa0682420 | 0.803393 | 3.561477e-49 | -8.615850e-47 |
| Msa0207970 | Msa0684590 | 0.821277 | 4.397218e-53 | -8.615850e-47 |
| Msa0207970 | Msa0684600 | 0.824566 | 7.531438e-54 | -8.615850e-47 |
| Msa0207970 | Msa0694320 | 0.813585 | 2.375816e-51 | -8.615850e-47 |
| Msa0207970 | Msa0699170 | 0.803556 | 3.294698e-49 | -8.615850e-47 |
| Msa0207970 | Msa0701490 | 0.857263 | 1.838416e-62 | -8.615850e-47 |
| Msa0207970 | Msa0701560 | 0.858136 | 1.013297e-62 | -8.615850e-47 |
| Msa0207970 | Msa0704560 | 0.819473 | 1.140043e-52 | -8.615850e-47 |
| Msa0207970 | Msa0715260 | 0.815394 | 9.453428e-52 | -8.615850e-47 |
| Msa0207970 | Msa0716620 | 0.830982 | 2.160545e-55 | -8.615850e-47 |
| Msa0207970 | Msa0721260 | 0.824823 | 6.549784e-54 | -8.615850e-47 |
| Msa0207970 | Msa0728520 | 0.866356 | 3.027048e-65 | -8.615850e-47 |
| Msa0207970 | Msa0738570 | 0.833749 | 4.459088e-56 | -8.615850e-47 |
| Msa0207970 | Msa0738660 | 0.834695 | 2.582463e-56 | -8.615850e-47 |
| Msa0207970 | Msa0747500 | 0.800014 | 1.757924e-48 | -8.615850e-47 |
| Msa0207970 | Msa0750790 | 0.806683 | 7.301450e-50 | -8.615850e-47 |
| Msa0207970 | Msa0750830 | 0.802898 | 4.508975e-49 | -8.615850e-47 |
| Msa0207970 | Msa0753410 | 0.824458 | 7.983905e-54 | -8.615850e-47 |
| Msa0207970 | Msa0757240 | 0.816007 | 6.901822e-52 | -8.615850e-47 |
| Msa0207970 | Msa0772350 | 0.829541 | 4.858400e-55 | -8.615850e-47 |
| Msa0207970 | Msa0776540 | 0.869481 | 2.999062e-66 | -8.615850e-47 |
| Msa0207970 | Msa0783580 | 0.823039 | 1.716824e-53 | -8.615850e-47 |
| Msa0207970 | Msa0793570 | 0.806675 | 7.329546e-50 | -8.615850e-47 |
| Msa0207970 | Msa0795320 | 0.810551 | 1.089449e-50 | -8.615850e-47 |
| Msa0207970 | Msa0795330 | 0.826346 | 2.853062e-54 | -8.615850e-47 |
| Msa0207970 | Msa0798230 | 0.816473 | 5.430239e-52 | -8.615850e-47 |
| Msa0207970 | Msa0819110 | 0.839090 | 1.950278e-57 | -8.615850e-47 |
| Msa0207970 | Msa0826360 | 0.821567 | 3.769341e-53 | -8.615850e-47 |
| Msa0207970 | Msa0836740 | 0.813817 | 2.112143e-51 | -8.615850e-47 |
| Msa0207970 | Msa0837550 | 0.837523 | 4.944224e-57 | -8.615850e-47 |
| Msa0207970 | Msa0854840 | 0.810871 | 9.290072e-51 | -8.615850e-47 |
| Msa0207970 | Msa0859230 | 0.837218 | 5.919359e-57 | -8.615850e-47 |
| Msa0207970 | Msa0859250 | 0.801332 | 9.464632e-49 | -8.615850e-47 |
| Msa0207970 | Msa0865830 | 0.802617 | 5.153910e-49 | -8.615850e-47 |
| Msa0207970 | Msa0868870 | 0.824604 | 7.377523e-54 | -8.615850e-47 |
| Msa0207970 | Msa0874750 | 0.813179 | 2.918423e-51 | -8.615850e-47 |
| Msa0207970 | Msa0883610 | 0.851849 | 6.787421e-61 | -8.615850e-47 |
| Msa0207970 | Msa0896920 | 0.821523 | 3.859721e-53 | -8.615850e-47 |
| Msa0207970 | Msa0910570 | 0.832182 | 1.094087e-55 | -8.615850e-47 |
| Msa0207970 | Msa0910590 | 0.841704 | 4.042963e-58 | -8.615850e-47 |
| Msa0207970 | Msa0932900 | 0.807849 | 4.134778e-50 | -8.615850e-47 |
| Msa0207970 | Msa0932910 | 0.806198 | 9.243692e-50 | -8.615850e-47 |
| Msa0207970 | Msa0932930 | 0.830743 | 2.473032e-55 | -8.615850e-47 |
| Msa0207970 | Msa0933580 | 0.810157 | 1.325319e-50 | -8.615850e-47 |
| Msa0207970 | Msa0933610 | 0.813592 | 2.367005e-51 | -8.615850e-47 |
| Msa0207970 | Msa0948430 | 0.838712 | 2.444071e-57 | -8.615850e-47 |
| Msa0207970 | Msa0948460 | 0.813476 | 2.510354e-51 | -8.615850e-47 |
| Msa0207970 | Msa0951060 | 0.811314 | 7.449424e-51 | -8.615850e-47 |
| Msa0207970 | Msa0970790 | 0.830004 | 3.748370e-55 | -8.615850e-47 |
| Msa0207970 | Msa0976400 | 0.825318 | 5.003033e-54 | -8.615850e-47 |
| Msa0207970 | Msa0985250 | 0.849397 | 3.320526e-60 | -8.615850e-47 |
| Msa0207970 | Msa0985260 | 0.832441 | 9.436651e-56 | -8.615850e-47 |
| Msa0207970 | Msa0985290 | 0.832666 | 8.299055e-56 | -8.615850e-47 |
| Msa0207970 | Msa0985380 | 0.819158 | 1.344891e-52 | -8.615850e-47 |
| Msa0207970 | Msa1006170 | 0.821882 | 3.187919e-53 | -8.615850e-47 |
| Msa0207970 | Msa1023430 | 0.888184 | 7.393804e-73 | -8.615850e-47 |
| Msa0207970 | Msa1024350 | 0.821546 | 3.811480e-53 | -8.615850e-47 |
| Msa0207970 | Msa1035050 | 0.810022 | 1.417368e-50 | -8.615850e-47 |
| Msa0207970 | Msa1040330 | 0.827350 | 1.642447e-54 | -8.615850e-47 |
| Msa0207970 | Msa1061840 | 0.849651 | 2.820093e-60 | -8.615850e-47 |
| Msa0207970 | Msa1064940 | 0.804434 | 2.164026e-49 | -8.615850e-47 |
| Msa0207970 | Msa1083100 | 0.847325 | 1.242176e-59 | -8.615850e-47 |
| Msa0207970 | Msa1087380 | 0.829303 | 5.551612e-55 | -8.615850e-47 |
| Msa0207970 | Msa1107510 | 0.865316 | 6.451829e-65 | -8.615850e-47 |
| Msa0207970 | Msa1109890 | 0.806316 | 8.729337e-50 | -8.615850e-47 |
| Msa0207970 | Msa1110040 | 0.804266 | 2.346262e-49 | -8.615850e-47 |
| Msa0207970 | Msa1127940 | 0.831794 | 1.363553e-55 | -8.615850e-47 |
| Msa0207970 | Msa1151070 | 0.874889 | 4.744121e-68 | -8.615850e-47 |
| Msa0207970 | Msa1162430 | 0.802722 | 4.901647e-49 | -8.615850e-47 |
| Msa0207970 | Msa1165860 | 0.830092 | 3.568201e-55 | -8.615850e-47 |
| Msa0207970 | Msa1208830 | 0.870675 | 1.220248e-66 | -8.615850e-47 |
| Msa0207970 | Msa1208910 | 0.884613 | 1.650998e-71 | -8.615850e-47 |
| Msa0207970 | Msa1223560 | 0.804072 | 2.574516e-49 | -8.615850e-47 |
| Msa0207970 | Msa1323030 | 0.814516 | 1.480288e-51 | -8.615850e-47 |
| Msa0207970 | Msa1323150 | 0.826989 | 2.003586e-54 | -8.615850e-47 |
| Msa0207970 | Msa1323160 | 0.804158 | 2.470060e-49 | -8.615850e-47 |
| Msa0207970 | Msa1349420 | 0.827781 | 1.294267e-54 | -8.615850e-47 |
| Msa0207970 | Msa1395690 | 0.816359 | 5.760986e-52 | -8.615850e-47 |
| Msa0207970 | Msa1398110 | 0.823141 | 1.625390e-53 | -8.615850e-47 |
| Msa0207970 | Msa1398120 | 0.815690 | 8.122704e-52 | -8.615850e-47 |
| Msa0207970 | Msa1399430 | -0.839539 | 1.491729e-57 | -8.615850e-47 |
| Msa0207970 | Msa1412360 | 0.801492 | 8.776303e-49 | -8.615850e-47 |
| Msa0207970 | Msa1419210 | 0.854104 | 1.537286e-61 | -8.615850e-47 |
| Msa0207970 | Msa1427000 | 0.819826 | 9.473024e-53 | -8.615850e-47 |
| Msa0207970 | Msa1438160 | 0.838355 | 3.020981e-57 | -8.615850e-47 |
| Msa0207970 | Msa1439780 | 0.819787 | 9.667871e-53 | -8.615850e-47 |
| Msa0207970 | Msa1445900 | 0.804246 | 2.368895e-49 | -8.615850e-47 |
| Msa0207970 | Msa1449470 | 0.804282 | 2.327663e-49 | -8.615850e-47 |
| Msa0207970 | Msa1459930 | 0.819292 | 1.253890e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0207970 | MtrunA17_Chr2g0306461 | 88.500 | 200 | 18 | 2 | 1 | 196 | 1 | 199 | 4.59e-107 | 305 |
| Msa0207970 | MtrunA17_Chr4g0033131 | 51.741 | 201 | 64 | 5 | 1 | 197 | 1 | 172 | 9.89e-59 | 182 |
| Msa0207970 | MtrunA17_Chr4g0033531 | 51.741 | 201 | 64 | 5 | 1 | 197 | 1 | 172 | 9.89e-59 | 182 |
| Msa0207970 | MtrunA17_Chr4g0064041 | 47.917 | 144 | 72 | 3 | 1 | 141 | 1 | 144 | 2.57e-35 | 127 |
| Msa0207970 | MtrunA17_Chr4g0064041 | 49.000 | 100 | 50 | 1 | 28 | 126 | 191 | 290 | 3.90e-27 | 105 |
| Msa0207970 | MtrunA17_Chr6g0483981 | 41.808 | 177 | 93 | 5 | 9 | 175 | 8 | 184 | 1.25e-32 | 122 |
| Msa0207970 | MtrunA17_Chr4g0064031 | 44.755 | 143 | 62 | 5 | 17 | 155 | 17 | 146 | 1.11e-31 | 112 |
| Msa0207970 | MtrunA17_Chr3g0132441 | 44.231 | 104 | 54 | 1 | 23 | 126 | 21 | 120 | 3.40e-25 | 96.7 |
| Msa0207970 | MtrunA17_Chr8g0387804 | 37.984 | 129 | 77 | 3 | 1 | 127 | 1 | 128 | 1.01e-23 | 91.3 |
| Msa0207970 | MtrunA17_Chr2g0324721 | 34.066 | 182 | 112 | 5 | 1 | 178 | 1 | 178 | 1.37e-23 | 92.8 |
| Msa0207970 | MtrunA17_Chr2g0331181 | 37.762 | 143 | 84 | 4 | 11 | 151 | 9 | 148 | 3.43e-23 | 91.7 |
| Msa0207970 | MtrunA17_Chr3g0132431 | 37.692 | 130 | 71 | 2 | 23 | 152 | 21 | 140 | 8.11e-23 | 90.5 |
| Msa0207970 | MtrunA17_Chr2g0323021 | 35.878 | 131 | 79 | 2 | 8 | 137 | 5 | 131 | 7.24e-21 | 86.3 |
| Msa0207970 | MtrunA17_Chr2g0317231 | 35.433 | 127 | 77 | 3 | 3 | 128 | 2 | 124 | 2.38e-20 | 88.2 |
| Msa0207970 | MtrunA17_Chr8g0335531 | 34.884 | 172 | 91 | 5 | 7 | 163 | 1 | 166 | 3.67e-20 | 83.6 |
| Msa0207970 | MtrunA17_Chr3g0132701 | 39.062 | 128 | 70 | 4 | 1 | 126 | 1 | 122 | 6.11e-20 | 83.6 |
| Msa0207970 | MtrunA17_Chr8g0360371 | 35.461 | 141 | 78 | 5 | 10 | 148 | 7 | 136 | 8.89e-20 | 84.7 |
| Msa0207970 | MtrunA17_Chr3g0132511 | 39.062 | 128 | 70 | 4 | 1 | 126 | 1 | 122 | 9.16e-20 | 83.2 |
| Msa0207970 | MtrunA17_Chr5g0394321 | 30.818 | 159 | 102 | 4 | 8 | 165 | 7 | 158 | 2.11e-19 | 81.6 |
| Msa0207970 | MtrunA17_Chr4g0062341 | 29.193 | 161 | 106 | 3 | 9 | 167 | 13 | 167 | 1.90e-18 | 79.0 |
| Msa0207970 | MtrunA17_Chr4g0062311 | 29.193 | 161 | 106 | 3 | 9 | 167 | 13 | 167 | 1.90e-18 | 79.0 |
| Msa0207970 | MtrunA17_Chr1g0150131 | 32.877 | 146 | 86 | 4 | 7 | 148 | 12 | 149 | 1.99e-18 | 79.0 |
| Msa0207970 | MtrunA17_Chr6g0481491 | 34.711 | 121 | 75 | 1 | 10 | 130 | 10 | 126 | 2.24e-18 | 79.3 |
| Msa0207970 | MtrunA17_Chr4g0040291 | 34.694 | 147 | 83 | 5 | 24 | 163 | 21 | 161 | 9.78e-18 | 77.0 |
| Msa0207970 | MtrunA17_Chr3g0136871 | 35.036 | 137 | 83 | 3 | 25 | 155 | 24 | 160 | 1.03e-17 | 77.0 |
| Msa0207970 | MtrunA17_Chr2g0301431 | 36.975 | 119 | 64 | 4 | 7 | 124 | 14 | 122 | 1.30e-17 | 75.1 |
| Msa0207970 | MtrunA17_Chr8g0335571 | 38.318 | 107 | 60 | 2 | 25 | 129 | 21 | 123 | 2.34e-17 | 76.6 |
| Msa0207970 | MtrunA17_Chr8g0385021 | 33.333 | 123 | 78 | 3 | 7 | 126 | 1 | 122 | 5.88e-17 | 76.6 |
| Msa0207970 | MtrunA17_Chr7g0253761 | 32.500 | 120 | 75 | 3 | 10 | 127 | 7 | 122 | 6.41e-17 | 74.7 |
| Msa0207970 | MtrunA17_Chr8g0385031 | 33.333 | 123 | 78 | 3 | 7 | 126 | 1 | 122 | 6.73e-17 | 77.0 |
| Msa0207970 | MtrunA17_Chr1g0196801 | 32.117 | 137 | 87 | 2 | 25 | 159 | 20 | 152 | 1.13e-16 | 74.3 |
| Msa0207970 | MtrunA17_Chr2g0319611 | 28.333 | 240 | 110 | 8 | 20 | 197 | 18 | 257 | 2.46e-16 | 74.7 |
| Msa0207970 | MtrunA17_Chr3g0125791 | 38.095 | 105 | 57 | 3 | 21 | 124 | 26 | 123 | 3.96e-16 | 71.2 |
| Msa0207970 | MtrunA17_Chr7g0253631 | 34.426 | 122 | 74 | 3 | 8 | 127 | 5 | 122 | 4.02e-16 | 73.9 |
| Msa0207970 | MtrunA17_Chr8g0380901 | 32.000 | 125 | 77 | 3 | 1 | 124 | 1 | 118 | 4.47e-16 | 71.2 |
| Msa0207970 | MtrunA17_Chr6g0458331 | 35.833 | 120 | 72 | 3 | 17 | 135 | 29 | 144 | 5.79e-16 | 72.0 |
| Msa0207970 | MtrunA17_Chr2g0324711 | 30.645 | 124 | 83 | 2 | 4 | 126 | 1 | 122 | 8.25e-16 | 74.3 |
| Msa0207970 | MtrunA17_Chr4g0039721 | 27.564 | 156 | 104 | 3 | 9 | 156 | 13 | 167 | 1.75e-15 | 71.2 |
| Msa0207970 | MtrunA17_Chr1g0211101 | 31.783 | 129 | 78 | 5 | 7 | 132 | 14 | 135 | 2.67e-15 | 70.5 |
| Msa0207970 | MtrunA17_Chr8g0380711 | 36.792 | 106 | 58 | 4 | 21 | 124 | 21 | 119 | 4.15e-15 | 68.6 |
| Msa0207970 | MtrunA17_Chr1g0205701 | 26.623 | 154 | 110 | 2 | 12 | 164 | 9 | 160 | 6.70e-15 | 69.7 |
| Msa0207970 | MtrunA17_Chr3g0132411 | 34.848 | 132 | 80 | 2 | 3 | 132 | 38 | 165 | 1.98e-14 | 68.2 |
| Msa0207970 | MtrunA17_Chr7g0253641 | 32.773 | 119 | 74 | 3 | 10 | 126 | 7 | 121 | 2.40e-14 | 68.9 |
| Msa0207970 | MtrunA17_Chr6g0459441 | 36.893 | 103 | 60 | 3 | 25 | 126 | 23 | 121 | 2.48e-14 | 68.2 |
| Msa0207970 | MtrunA17_Chr1g0185541 | 47.458 | 59 | 31 | 0 | 69 | 127 | 13 | 71 | 6.34e-14 | 64.3 |
| Msa0207970 | MtrunA17_Chr3g0125761 | 31.667 | 120 | 74 | 3 | 6 | 124 | 11 | 123 | 2.20e-13 | 64.3 |
| Msa0207970 | MtrunA17_Chr4g0041811 | 26.500 | 200 | 125 | 5 | 4 | 183 | 6 | 203 | 3.77e-13 | 65.5 |
| Msa0207970 | MtrunA17_Chr7g0253701 | 29.600 | 125 | 81 | 4 | 8 | 129 | 5 | 125 | 5.43e-13 | 63.9 |
| Msa0207970 | MtrunA17_Chr7g0253671 | 29.600 | 125 | 81 | 4 | 8 | 129 | 5 | 125 | 5.43e-13 | 63.9 |
| Msa0207970 | MtrunA17_Chr6g0453921 | 33.103 | 145 | 82 | 7 | 9 | 149 | 18 | 151 | 2.22e-12 | 62.8 |
| Msa0207970 | MtrunA17_Chr7g0256441 | 32.353 | 136 | 71 | 4 | 25 | 155 | 24 | 143 | 2.77e-12 | 61.6 |
| Msa0207970 | MtrunA17_Chr6g0453801 | 30.939 | 181 | 99 | 8 | 1 | 178 | 10 | 167 | 4.84e-12 | 61.6 |
| Msa0207970 | MtrunA17_Chr7g0253731 | 29.730 | 111 | 72 | 3 | 12 | 120 | 8 | 114 | 5.11e-12 | 61.2 |
| Msa0207970 | MtrunA17_Chr7g0253681 | 28.571 | 126 | 82 | 4 | 8 | 129 | 5 | 126 | 7.22e-12 | 60.8 |
| Msa0207970 | MtrunA17_Chr8g0385041 | 28.571 | 119 | 81 | 3 | 9 | 126 | 6 | 121 | 1.08e-11 | 62.4 |
| Msa0207970 | MtrunA17_Chr2g0289741 | 28.302 | 159 | 106 | 5 | 3 | 158 | 1 | 154 | 1.46e-11 | 60.5 |
| Msa0207970 | MtrunA17_Chr4g0073901 | 28.289 | 152 | 103 | 4 | 9 | 157 | 9 | 157 | 5.63e-11 | 58.9 |
| Msa0207970 | MtrunA17_Chr4g0073921 | 31.298 | 131 | 83 | 4 | 6 | 129 | 2 | 132 | 7.75e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0207970 | AT5G20230.1 | 37.079 | 178 | 95 | 5 | 27 | 192 | 24 | 196 | 4.89e-23 | 91.7 |
| Msa0207970 | AT2G32300.1 | 40.000 | 140 | 78 | 4 | 5 | 143 | 4 | 138 | 6.06e-23 | 92.8 |
| Msa0207970 | AT5G53870.2 | 35.638 | 188 | 112 | 5 | 7 | 188 | 10 | 194 | 9.55e-23 | 94.0 |
| Msa0207970 | AT2G32300.2 | 40.000 | 140 | 78 | 4 | 5 | 143 | 34 | 168 | 1.63e-22 | 92.4 |
| Msa0207970 | AT5G53870.1 | 35.638 | 188 | 112 | 5 | 7 | 188 | 10 | 194 | 1.72e-22 | 93.6 |
| Msa0207970 | AT2G25060.1 | 36.667 | 150 | 84 | 4 | 12 | 150 | 14 | 163 | 1.50e-21 | 87.4 |
| Msa0207970 | AT3G20570.1 | 33.511 | 188 | 113 | 6 | 5 | 182 | 3 | 188 | 4.11e-20 | 84.3 |
| Msa0207970 | AT4G27520.1 | 31.757 | 148 | 92 | 4 | 3 | 143 | 5 | 150 | 9.84e-20 | 85.9 |
| Msa0207970 | AT3G17675.1 | 29.134 | 127 | 85 | 2 | 2 | 127 | 6 | 128 | 3.47e-19 | 79.7 |
| Msa0207970 | AT4G28365.1 | 31.034 | 203 | 118 | 9 | 6 | 197 | 8 | 199 | 1.51e-18 | 80.1 |
| Msa0207970 | AT1G72230.1 | 39.669 | 121 | 68 | 2 | 46 | 164 | 37 | 154 | 2.11e-18 | 79.3 |
| Msa0207970 | AT4G31840.1 | 29.050 | 179 | 101 | 4 | 19 | 195 | 18 | 172 | 7.92e-18 | 77.4 |
| Msa0207970 | AT5G07475.1 | 30.000 | 150 | 96 | 3 | 1 | 148 | 1 | 143 | 1.11e-17 | 77.4 |
| Msa0207970 | AT3G60270.1 | 36.000 | 100 | 60 | 1 | 30 | 129 | 28 | 123 | 3.02e-17 | 76.3 |
| Msa0207970 | AT2G26720.1 | 33.582 | 134 | 78 | 4 | 9 | 138 | 14 | 140 | 1.08e-16 | 75.1 |
| Msa0207970 | AT3G27200.1 | 28.800 | 125 | 83 | 3 | 4 | 126 | 1 | 121 | 7.49e-16 | 72.4 |
| Msa0207970 | AT5G26330.1 | 32.520 | 123 | 78 | 3 | 7 | 126 | 1 | 121 | 8.04e-15 | 69.7 |
| Msa0207970 | AT2G31050.1 | 34.815 | 135 | 78 | 4 | 8 | 138 | 12 | 140 | 1.37e-14 | 69.3 |
| Msa0207970 | AT1G79800.1 | 32.609 | 138 | 84 | 3 | 9 | 138 | 15 | 151 | 6.73e-14 | 67.4 |
| Msa0207970 | AT3G18590.1 | 32.540 | 126 | 76 | 4 | 5 | 126 | 6 | 126 | 7.57e-14 | 67.4 |
| Msa0207970 | AT1G22480.1 | 41.772 | 79 | 46 | 0 | 53 | 131 | 40 | 118 | 1.15e-13 | 66.6 |
| Msa0207970 | AT4G32490.1 | 30.935 | 139 | 88 | 5 | 3 | 138 | 5 | 138 | 1.29e-13 | 67.4 |
| Msa0207970 | AT3G60280.1 | 34.286 | 105 | 65 | 1 | 25 | 129 | 21 | 121 | 7.19e-13 | 65.1 |
| Msa0207970 | AT5G14345.1 | 30.189 | 106 | 72 | 2 | 35 | 139 | 23 | 127 | 9.52e-13 | 63.2 |
| Msa0207970 | AT5G57920.1 | 27.273 | 121 | 86 | 2 | 8 | 126 | 3 | 123 | 1.09e-12 | 63.9 |
| Msa0207970 | AT5G57920.3 | 23.529 | 170 | 113 | 4 | 1 | 153 | 18 | 187 | 1.53e-12 | 64.3 |
| Msa0207970 | AT4G30590.1 | 32.039 | 103 | 68 | 2 | 30 | 130 | 30 | 132 | 1.85e-12 | 63.5 |
| Msa0207970 | AT2G44790.1 | 34.810 | 158 | 96 | 4 | 46 | 197 | 42 | 198 | 5.86e-12 | 62.4 |
| Msa0207970 | AT1G48940.1 | 29.412 | 119 | 78 | 3 | 10 | 126 | 11 | 125 | 6.59e-12 | 61.6 |
| Msa0207970 | AT5G15350.1 | 34.965 | 143 | 78 | 7 | 12 | 150 | 12 | 143 | 7.28e-12 | 61.6 |
| Msa0207970 | AT5G57920.2 | 31.313 | 99 | 66 | 2 | 30 | 126 | 24 | 122 | 1.15e-11 | 61.2 |
| Msa0207970 | AT2G27035.1 | 32.667 | 150 | 86 | 7 | 8 | 154 | 8 | 145 | 3.86e-11 | 59.3 |
| Msa0207970 | AT2G02850.1 | 30.000 | 120 | 74 | 4 | 8 | 124 | 14 | 126 | 7.39e-11 | 57.8 |
Find 69 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGTGTGGTTTGTGTTTC+AGG | 0.165810 | 2_1:+41183533 | None:intergenic |
| AAACTTTAACGCTTAGCTTT+TGG | 0.290349 | 2_1:+41181836 | None:intergenic |
| TTAGTATTTGATATACATAT+TGG | 0.336692 | 2_1:-41181512 | Msa0207970:three_prime_UTR |
| GGTGATGGAGGAGTTGCATC+AGG | 0.366204 | 2_1:+41181691 | None:intergenic |
| AATTGCAACATCAATCAAAA+TGG | 0.366532 | 2_1:-41181952 | Msa0207970:CDS |
| CTGTTAAGAGTAACTCTTGC+TGG | 0.373715 | 2_1:+41181910 | None:intergenic |
| TAGTATTTGATATACATATT+GGG | 0.374527 | 2_1:-41181511 | Msa0207970:three_prime_UTR |
| CTGGTCCTGTTGTTATGACT+TGG | 0.377013 | 2_1:+41181929 | None:intergenic |
| ACCATTCAAGGTCATTGTTC+CGG | 0.394011 | 2_1:-41181862 | Msa0207970:CDS |
| ATTGCTTGAATTGAATTTGA+AGG | 0.406033 | 2_1:+41183597 | None:intergenic |
| ATAAACACAAGTACTCAAAC+AGG | 0.409733 | 2_1:-41183561 | Msa0207970:five_prime_UTR |
| ATGATAACCGCAATGAGAAC+AGG | 0.411992 | 2_1:+41181637 | None:intergenic |
| TAAATTGTTAAAAGAGTGGT+TGG | 0.426559 | 2_1:+41183732 | None:intergenic |
| CGGTAATATAAAATGAAAAC+AGG | 0.427295 | 2_1:+41181404 | None:intergenic |
| GGAGTAGATGTAGGAGGAGT+AGG | 0.442205 | 2_1:+41181787 | None:intergenic |
| AGAGTTACTCTTAACAGAAC+TGG | 0.466599 | 2_1:-41181904 | Msa0207970:CDS |
| ACCGGAACAATGACCTTGAA+TGG | 0.487199 | 2_1:+41181861 | None:intergenic |
| GTAGGAGGAGTAGGAGAAGG+AGG | 0.487629 | 2_1:+41181796 | None:intergenic |
| CGGCGAAGGTGTTCCTCCGC+TGG | 0.488502 | 2_1:+41181729 | None:intergenic |
| CCTCCGCTGGTAGGTGGAGT+AGG | 0.489177 | 2_1:+41181742 | None:intergenic |
| TTGTTTGAATGTATTATTGG+CGG | 0.499396 | 2_1:+41183351 | None:intergenic |
| CATACTGTTGGAGGCACCAC+TGG | 0.499434 | 2_1:-41183418 | Msa0207970:CDS |
| AATGGCCAAGTCATAACAAC+AGG | 0.504661 | 2_1:-41181934 | Msa0207970:CDS |
| ACGAGAGTGGTAGCTGAGCC+TGG | 0.506000 | 2_1:+41181670 | None:intergenic |
| AGGAGTTGCATCAGGGCCGG+TGG | 0.506469 | 2_1:+41181699 | None:intergenic |
| TAAAACGAAGCGCCGCCACT+TGG | 0.519955 | 2_1:+41183385 | None:intergenic |
| TAATTAAATTGTTAAAAGAG+TGG | 0.521418 | 2_1:+41183728 | None:intergenic |
| GATTAATAAAAGTTGTACTA+CGG | 0.523216 | 2_1:-41181446 | Msa0207970:three_prime_UTR |
| GTAGGAGGAGGAGTAGATGT+AGG | 0.523768 | 2_1:+41181778 | None:intergenic |
| TTCAGCAACAGTGTGGCCTC+CGG | 0.526784 | 2_1:+41181996 | None:intergenic |
| TCTACTCCTCCTCCTACATC+AGG | 0.528805 | 2_1:-41181772 | Msa0207970:CDS |
| AGGAGAAGGAGGAGAAGTCG+AGG | 0.539764 | 2_1:+41181807 | None:intergenic |
| CACTGTTGCTGAAGTAAGCA+AGG | 0.543847 | 2_1:-41181986 | Msa0207970:CDS |
| TCAGGGCCGGTGGGAGATGA+CGG | 0.548510 | 2_1:+41181709 | None:intergenic |
| GAAGCAGCAGATCATACTGT+TGG | 0.548866 | 2_1:-41183430 | Msa0207970:CDS |
| GAAGGTGTTCCTCCGCTGGT+AGG | 0.551016 | 2_1:+41181733 | None:intergenic |
| AGTCAAGCAAGCACATCAAA+CGG | 0.551650 | 2_1:+41181535 | None:intergenic |
| GATGTAGGAGGAGTAGGAGA+AGG | 0.553864 | 2_1:+41181793 | None:intergenic |
| GGTGTTCCTCCGCTGGTAGG+TGG | 0.555413 | 2_1:+41181736 | None:intergenic |
| GTAGGAGTAGTTCCTGATGT+AGG | 0.559933 | 2_1:+41181760 | None:intergenic |
| GTGGTAGCTGAGCCTGGTGA+TGG | 0.561174 | 2_1:+41181676 | None:intergenic |
| TTCAAACAAAACGATGTCCT+AGG | 0.564087 | 2_1:-41183337 | Msa0207970:intron |
| TGGAGGAGTTGCATCAGGGC+CGG | 0.566001 | 2_1:+41181696 | None:intergenic |
| GATGCAACTCCTCCATCACC+AGG | 0.578460 | 2_1:-41181688 | Msa0207970:CDS |
| GGAGGAGGAGTAGATGTAGG+AGG | 0.578805 | 2_1:+41181781 | None:intergenic |
| GGAGTTGCATCAGGGCCGGT+GGG | 0.580673 | 2_1:+41181700 | None:intergenic |
| GTAGTTCCTGATGTAGGAGG+AGG | 0.581223 | 2_1:+41181766 | None:intergenic |
| ATTATATATAGAGGATTGAG+AGG | 0.584728 | 2_1:+41183638 | None:intergenic |
| CCGGTGGGAGATGACGGCGA+AGG | 0.587429 | 2_1:+41181715 | None:intergenic |
| AAATTGTTAAAAGAGTGGTT+GGG | 0.588570 | 2_1:+41183733 | None:intergenic |
| GCAGCAGATCATACTGTTGG+AGG | 0.591168 | 2_1:-41183427 | Msa0207970:CDS |
| TACGTTCCCTGTTCTCATTG+CGG | 0.597691 | 2_1:-41181644 | Msa0207970:CDS |
| ATTCAAGGTCATTGTTCCGG+TGG | 0.607111 | 2_1:-41181859 | Msa0207970:CDS |
| GGTTGGAGTGTTCCAAGTGG+CGG | 0.608033 | 2_1:-41183397 | Msa0207970:CDS |
| CTGTTGGAGGCACCACTGGT+TGG | 0.613559 | 2_1:-41183414 | Msa0207970:CDS |
| GTGATGGAGGAGTTGCATCA+GGG | 0.617363 | 2_1:+41181692 | None:intergenic |
| TGCTTACTTCAGCAACAGTG+TGG | 0.617452 | 2_1:+41181989 | None:intergenic |
| GGAGTAGTTCCTGATGTAGG+AGG | 0.617793 | 2_1:+41181763 | None:intergenic |
| GTAGCTGAGCCTGGTGATGG+AGG | 0.629395 | 2_1:+41181679 | None:intergenic |
| AAACAATCAAAGACTAACGA+TGG | 0.649277 | 2_1:+41181486 | None:intergenic |
| CCTTCGCCGTCATCTCCCAC+CGG | 0.651978 | 2_1:-41181715 | Msa0207970:CDS |
| TGATAACCGCAATGAGAACA+GGG | 0.653429 | 2_1:+41181638 | None:intergenic |
| AAACACAAGTACTCAAACAG+GGG | 0.657375 | 2_1:-41183559 | Msa0207970:five_prime_UTR |
| ACTTGGAACACTCCAACCAG+TGG | 0.663713 | 2_1:+41183402 | None:intergenic |
| TAAACACAAGTACTCAAACA+GGG | 0.672991 | 2_1:-41183560 | Msa0207970:five_prime_UTR |
| AGGGAACGTAGCAACGAGAG+TGG | 0.679886 | 2_1:+41181657 | None:intergenic |
| ACTCCTACTCCACCTACCAG+CGG | 0.712883 | 2_1:-41181745 | Msa0207970:CDS |
| ACTGGTTGGAGTGTTCCAAG+TGG | 0.717431 | 2_1:-41183400 | Msa0207970:CDS |
| CCTACTCCACCTACCAGCGG+AGG | 0.722083 | 2_1:-41181742 | Msa0207970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGTTTACTATAAAATATA+TGG | + | chr2_1:41182069-41182088 | None:intergenic | 10.0% |
| !! | TATTGAATATTGAATATTTA+AGG | - | chr2_1:41182407-41182426 | Msa0207970:intron | 10.0% |
| !! | ATTGAATATTGAATATTTAA+GGG | - | chr2_1:41182408-41182427 | Msa0207970:intron | 10.0% |
| !! | TTTGTTTACTATAAAATATA+TGG | + | chr2_1:41182069-41182088 | None:intergenic | 10.0% |
| !! | TATTGAATATTGAATATTTA+AGG | - | chr2_1:41182407-41182426 | Msa0207970:intron | 10.0% |
| !! | ATTGAATATTGAATATTTAA+GGG | - | chr2_1:41182408-41182427 | Msa0207970:intron | 10.0% |
| !! | TAATTAAATTGTTAAAAGAG+TGG | + | chr2_1:41181346-41181365 | None:intergenic | 15.0% |
| !!! | TTTTAGTTGATTATATATAG+AGG | + | chr2_1:41181445-41181464 | None:intergenic | 15.0% |
| !! | TTCAAAAGATAATCTAAATA+TGG | + | chr2_1:41181987-41182006 | None:intergenic | 15.0% |
| !! | TCAATATTCAATATTCTAAA+TGG | + | chr2_1:41182400-41182419 | None:intergenic | 15.0% |
| !!! | ATTTTTTTAAAGTTGTCTAA+TGG | + | chr2_1:41182581-41182600 | None:intergenic | 15.0% |
| !! | TTAGTATTTGATATACATAT+TGG | - | chr2_1:41183559-41183578 | Msa0207970:five_prime_UTR | 15.0% |
| !! | TAGTATTTGATATACATATT+GGG | - | chr2_1:41183560-41183579 | Msa0207970:five_prime_UTR | 15.0% |
| !! | AATTTGTATAACAAAAACAA+GGG | + | chr2_1:41183694-41183713 | None:intergenic | 15.0% |
| !!! | TAATTTGTATAACAAAAACA+AGG | + | chr2_1:41183695-41183714 | None:intergenic | 15.0% |
| !! | TAATTAAATTGTTAAAAGAG+TGG | + | chr2_1:41181346-41181365 | None:intergenic | 15.0% |
| !!! | TTTTAGTTGATTATATATAG+AGG | + | chr2_1:41181445-41181464 | None:intergenic | 15.0% |
| !! | TTCAAAAGATAATCTAAATA+TGG | + | chr2_1:41181987-41182006 | None:intergenic | 15.0% |
| !! | TCAATATTCAATATTCTAAA+TGG | + | chr2_1:41182400-41182419 | None:intergenic | 15.0% |
| !!! | ATTTTTTTAAAGTTGTCTAA+TGG | + | chr2_1:41182581-41182600 | None:intergenic | 15.0% |
| !! | TTAGTATTTGATATACATAT+TGG | - | chr2_1:41183559-41183578 | Msa0207970:five_prime_UTR | 15.0% |
| !! | TAGTATTTGATATACATATT+GGG | - | chr2_1:41183560-41183579 | Msa0207970:five_prime_UTR | 15.0% |
| !! | AATTTGTATAACAAAAACAA+GGG | + | chr2_1:41183694-41183713 | None:intergenic | 15.0% |
| !!! | TAATTTGTATAACAAAAACA+AGG | + | chr2_1:41183695-41183714 | None:intergenic | 15.0% |
| !!! | GTTTTGTTTGAATGTATTAT+TGG | + | chr2_1:41181726-41181745 | None:intergenic | 20.0% |
| !!! | TAAATCTTATCTTTTGTGTT+TGG | - | chr2_1:41181856-41181875 | Msa0207970:CDS | 20.0% |
| !!! | AAATCTTATCTTTTGTGTTT+GGG | - | chr2_1:41181857-41181876 | Msa0207970:CDS | 20.0% |
| !! | TCAACTATCAAAATCTAATA+TGG | + | chr2_1:41182125-41182144 | None:intergenic | 20.0% |
| !!! | TCTGTTGATAATTAAATCAA+TGG | - | chr2_1:41182146-41182165 | Msa0207970:intron | 20.0% |
| !!! | TTTGTTATTCTGTAATAAGT+TGG | + | chr2_1:41182337-41182356 | None:intergenic | 20.0% |
| !! | TGAATAAACACTTAATAAAG+AGG | + | chr2_1:41182635-41182654 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTCTTCAAGTCAT+CGG | - | chr2_1:41182740-41182759 | Msa0207970:intron | 20.0% |
| !!! | TCTTTTACATCTTGAAAATA+GGG | + | chr2_1:41182971-41182990 | None:intergenic | 20.0% |
| !! | AAAATGGGACTATTAAAATA+AGG | + | chr2_1:41183020-41183039 | None:intergenic | 20.0% |
| !!! | TATTTTATATGTACCATTCA+AGG | - | chr2_1:41183197-41183216 | Msa0207970:intron | 20.0% |
| !!! | AACATATTGTTCTAGATTTT+TGG | - | chr2_1:41183458-41183477 | Msa0207970:CDS | 20.0% |
| !! | GATTAATAAAAGTTGTACTA+CGG | - | chr2_1:41183625-41183644 | Msa0207970:five_prime_UTR | 20.0% |
| !!! | GTTTTGTTTGAATGTATTAT+TGG | + | chr2_1:41181726-41181745 | None:intergenic | 20.0% |
| !!! | TAAATCTTATCTTTTGTGTT+TGG | - | chr2_1:41181856-41181875 | Msa0207970:CDS | 20.0% |
| !!! | AAATCTTATCTTTTGTGTTT+GGG | - | chr2_1:41181857-41181876 | Msa0207970:CDS | 20.0% |
| !! | TCAACTATCAAAATCTAATA+TGG | + | chr2_1:41182125-41182144 | None:intergenic | 20.0% |
| !!! | TCTGTTGATAATTAAATCAA+TGG | - | chr2_1:41182146-41182165 | Msa0207970:intron | 20.0% |
| !!! | TTTGTTATTCTGTAATAAGT+TGG | + | chr2_1:41182337-41182356 | None:intergenic | 20.0% |
| !! | TGAATAAACACTTAATAAAG+AGG | + | chr2_1:41182635-41182654 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTCTTCAAGTCAT+CGG | - | chr2_1:41182740-41182759 | Msa0207970:intron | 20.0% |
| !!! | TCTTTTACATCTTGAAAATA+GGG | + | chr2_1:41182971-41182990 | None:intergenic | 20.0% |
| !! | AAAATGGGACTATTAAAATA+AGG | + | chr2_1:41183020-41183039 | None:intergenic | 20.0% |
| !!! | TATTTTATATGTACCATTCA+AGG | - | chr2_1:41183197-41183216 | Msa0207970:intron | 20.0% |
| !!! | AACATATTGTTCTAGATTTT+TGG | - | chr2_1:41183458-41183477 | Msa0207970:CDS | 20.0% |
| !! | GATTAATAAAAGTTGTACTA+CGG | - | chr2_1:41183625-41183644 | Msa0207970:five_prime_UTR | 20.0% |
| ! | ATTATATATAGAGGATTGAG+AGG | + | chr2_1:41181436-41181455 | None:intergenic | 25.0% |
| ! | ATTGCTTGAATTGAATTTGA+AGG | + | chr2_1:41181477-41181496 | None:intergenic | 25.0% |
| !!! | TTAACTGAGACATGTTTTTA+TGG | + | chr2_1:41181565-41181584 | None:intergenic | 25.0% |
| ! | TTGTTTGAATGTATTATTGG+CGG | + | chr2_1:41181723-41181742 | None:intergenic | 25.0% |
| !! | ATTTAGTTCCAAGTTTGTTT+AGG | + | chr2_1:41181841-41181860 | None:intergenic | 25.0% |
| !! | TAGATTATCTTTTGAACAGA+TGG | - | chr2_1:41181991-41182010 | Msa0207970:CDS | 25.0% |
| !! | TCCATTTTCCATTTAGAAAA+TGG | - | chr2_1:41182480-41182499 | Msa0207970:intron | 25.0% |
| !! | TCCATTTTCTAAATGGAAAA+TGG | + | chr2_1:41182484-41182503 | None:intergenic | 25.0% |
| !!! | GATTACATTTTTTGTTGTTG+AGG | + | chr2_1:41182787-41182806 | None:intergenic | 25.0% |
| ! | CTATTGTTAGAATAAGCAAT+TGG | + | chr2_1:41182836-41182855 | None:intergenic | 25.0% |
| !! | CTCTTTTACATCTTGAAAAT+AGG | + | chr2_1:41182972-41182991 | None:intergenic | 25.0% |
| ! | AATTGAAAACTGAAATTGGA+AGG | + | chr2_1:41183052-41183071 | None:intergenic | 25.0% |
| ! | GCAAAATTGAAAACTGAAAT+TGG | + | chr2_1:41183056-41183075 | None:intergenic | 25.0% |
| !! | ATTTCAGTTTTCAATTTTGC+CGG | - | chr2_1:41183056-41183075 | Msa0207970:intron | 25.0% |
| ! | AATTGCAACATCAATCAAAA+TGG | - | chr2_1:41183119-41183138 | Msa0207970:intron | 25.0% |
| ! | CGGTAATATAAAATGAAAAC+AGG | + | chr2_1:41183670-41183689 | None:intergenic | 25.0% |
| ! | ATTATATATAGAGGATTGAG+AGG | + | chr2_1:41181436-41181455 | None:intergenic | 25.0% |
| ! | ATTGCTTGAATTGAATTTGA+AGG | + | chr2_1:41181477-41181496 | None:intergenic | 25.0% |
| !!! | TTAACTGAGACATGTTTTTA+TGG | + | chr2_1:41181565-41181584 | None:intergenic | 25.0% |
| ! | TTGTTTGAATGTATTATTGG+CGG | + | chr2_1:41181723-41181742 | None:intergenic | 25.0% |
| !! | ATTTAGTTCCAAGTTTGTTT+AGG | + | chr2_1:41181841-41181860 | None:intergenic | 25.0% |
| !! | TAGATTATCTTTTGAACAGA+TGG | - | chr2_1:41181991-41182010 | Msa0207970:CDS | 25.0% |
| !! | TCCATTTTCCATTTAGAAAA+TGG | - | chr2_1:41182480-41182499 | Msa0207970:intron | 25.0% |
| !! | TCCATTTTCTAAATGGAAAA+TGG | + | chr2_1:41182484-41182503 | None:intergenic | 25.0% |
| !!! | GATTACATTTTTTGTTGTTG+AGG | + | chr2_1:41182787-41182806 | None:intergenic | 25.0% |
| ! | CTATTGTTAGAATAAGCAAT+TGG | + | chr2_1:41182836-41182855 | None:intergenic | 25.0% |
| !! | CTCTTTTACATCTTGAAAAT+AGG | + | chr2_1:41182972-41182991 | None:intergenic | 25.0% |
| ! | AATTGAAAACTGAAATTGGA+AGG | + | chr2_1:41183052-41183071 | None:intergenic | 25.0% |
| ! | GCAAAATTGAAAACTGAAAT+TGG | + | chr2_1:41183056-41183075 | None:intergenic | 25.0% |
| !! | ATTTCAGTTTTCAATTTTGC+CGG | - | chr2_1:41183056-41183075 | Msa0207970:intron | 25.0% |
| ! | AATTGCAACATCAATCAAAA+TGG | - | chr2_1:41183119-41183138 | Msa0207970:intron | 25.0% |
| ! | CGGTAATATAAAATGAAAAC+AGG | + | chr2_1:41183670-41183689 | None:intergenic | 25.0% |
| ATAAACACAAGTACTCAAAC+AGG | - | chr2_1:41181510-41181529 | Msa0207970:three_prime_UTR | 30.0% | |
| TAAACACAAGTACTCAAACA+GGG | - | chr2_1:41181511-41181530 | Msa0207970:three_prime_UTR | 30.0% | |
| !! | ATGTTTTTATGGTTGTTGTG+TGG | + | chr2_1:41181554-41181573 | None:intergenic | 30.0% |
| TACATTCTCCTAAACAAACT+TGG | - | chr2_1:41181830-41181849 | Msa0207970:CDS | 30.0% | |
| ! | ATTTTCAGTTTGATGTTCCA+TGG | - | chr2_1:41181907-41181926 | Msa0207970:CDS | 30.0% |
| ! | TTTTGAACAGATGGTTGTAA+CGG | - | chr2_1:41182000-41182019 | Msa0207970:CDS | 30.0% |
| CAGTATCGTGAACTTAAAAT+TGG | + | chr2_1:41182190-41182209 | None:intergenic | 30.0% | |
| ATTACAGAATAACAAACCCT+AGG | - | chr2_1:41182341-41182360 | Msa0207970:intron | 30.0% | |
| !! | TCTGAAATGTTGGTTTATAG+TGG | - | chr2_1:41182439-41182458 | Msa0207970:intron | 30.0% |
| TTTCTAAATGGAAAATGGAG+AGG | + | chr2_1:41182479-41182498 | None:intergenic | 30.0% | |
| ! | GATCTTCTCCATTTTCTAAA+TGG | + | chr2_1:41182491-41182510 | None:intergenic | 30.0% |
| ATGTAATCTAACGTGTGATT+TGG | - | chr2_1:41182799-41182818 | Msa0207970:intron | 30.0% | |
| TTTACATCTTGAAAATAGGG+AGG | + | chr2_1:41182968-41182987 | None:intergenic | 30.0% | |
| ! | GGAAGGCACAATAAAAAAAT+GGG | + | chr2_1:41183035-41183054 | None:intergenic | 30.0% |
| ! | TGGAAGGCACAATAAAAAAA+TGG | + | chr2_1:41183036-41183055 | None:intergenic | 30.0% |
| !! | AAACTTTAACGCTTAGCTTT+TGG | + | chr2_1:41183238-41183257 | None:intergenic | 30.0% |
| AAACAATCAAAGACTAACGA+TGG | + | chr2_1:41183588-41183607 | None:intergenic | 30.0% | |
| TGTATAACAAAAACAAGGGT+CGG | + | chr2_1:41183690-41183709 | None:intergenic | 30.0% | |
| ATAAACACAAGTACTCAAAC+AGG | - | chr2_1:41181510-41181529 | Msa0207970:three_prime_UTR | 30.0% | |
| TAAACACAAGTACTCAAACA+GGG | - | chr2_1:41181511-41181530 | Msa0207970:three_prime_UTR | 30.0% | |
| !! | ATGTTTTTATGGTTGTTGTG+TGG | + | chr2_1:41181554-41181573 | None:intergenic | 30.0% |
| TACATTCTCCTAAACAAACT+TGG | - | chr2_1:41181830-41181849 | Msa0207970:CDS | 30.0% | |
| ! | ATTTTCAGTTTGATGTTCCA+TGG | - | chr2_1:41181907-41181926 | Msa0207970:CDS | 30.0% |
| ! | TTTTGAACAGATGGTTGTAA+CGG | - | chr2_1:41182000-41182019 | Msa0207970:CDS | 30.0% |
| CAGTATCGTGAACTTAAAAT+TGG | + | chr2_1:41182190-41182209 | None:intergenic | 30.0% | |
| ATTACAGAATAACAAACCCT+AGG | - | chr2_1:41182341-41182360 | Msa0207970:intron | 30.0% | |
| !! | TCTGAAATGTTGGTTTATAG+TGG | - | chr2_1:41182439-41182458 | Msa0207970:intron | 30.0% |
| TTTCTAAATGGAAAATGGAG+AGG | + | chr2_1:41182479-41182498 | None:intergenic | 30.0% | |
| ! | GATCTTCTCCATTTTCTAAA+TGG | + | chr2_1:41182491-41182510 | None:intergenic | 30.0% |
| ATGTAATCTAACGTGTGATT+TGG | - | chr2_1:41182799-41182818 | Msa0207970:intron | 30.0% | |
| TTTACATCTTGAAAATAGGG+AGG | + | chr2_1:41182968-41182987 | None:intergenic | 30.0% | |
| ! | GGAAGGCACAATAAAAAAAT+GGG | + | chr2_1:41183035-41183054 | None:intergenic | 30.0% |
| ! | TGGAAGGCACAATAAAAAAA+TGG | + | chr2_1:41183036-41183055 | None:intergenic | 30.0% |
| !! | AAACTTTAACGCTTAGCTTT+TGG | + | chr2_1:41183238-41183257 | None:intergenic | 30.0% |
| AAACAATCAAAGACTAACGA+TGG | + | chr2_1:41183588-41183607 | None:intergenic | 30.0% | |
| TGTATAACAAAAACAAGGGT+CGG | + | chr2_1:41183690-41183709 | None:intergenic | 30.0% | |
| AAACACAAGTACTCAAACAG+GGG | - | chr2_1:41181512-41181531 | Msa0207970:three_prime_UTR | 35.0% | |
| TTCAAACAAAACGATGTCCT+AGG | - | chr2_1:41181734-41181753 | Msa0207970:CDS | 35.0% | |
| TTATTATTATTGGGCCACCA+TGG | + | chr2_1:41181927-41181946 | None:intergenic | 35.0% | |
| !! | GGTAACAAACTCTGAAATGT+TGG | - | chr2_1:41182429-41182448 | Msa0207970:intron | 35.0% |
| !! | AAATGTTGGTTTATAGTGGC+AGG | - | chr2_1:41182443-41182462 | Msa0207970:intron | 35.0% |
| !! | AATGTTGGTTTATAGTGGCA+GGG | - | chr2_1:41182444-41182463 | Msa0207970:intron | 35.0% |
| TGGAGAAGATCATAACTCAA+TGG | - | chr2_1:41182500-41182519 | Msa0207970:intron | 35.0% | |
| AAGATCATAACTCAATGGCA+GGG | - | chr2_1:41182505-41182524 | Msa0207970:intron | 35.0% | |
| TGTTGAATTAGAGCAGAGTT+TGG | + | chr2_1:41182682-41182701 | None:intergenic | 35.0% | |
| AGAGTTACTCTTAACAGAAC+TGG | - | chr2_1:41183167-41183186 | Msa0207970:intron | 35.0% | |
| AAACACAAGTACTCAAACAG+GGG | - | chr2_1:41181512-41181531 | Msa0207970:three_prime_UTR | 35.0% | |
| TTCAAACAAAACGATGTCCT+AGG | - | chr2_1:41181734-41181753 | Msa0207970:CDS | 35.0% | |
| TTATTATTATTGGGCCACCA+TGG | + | chr2_1:41181927-41181946 | None:intergenic | 35.0% | |
| !! | GGTAACAAACTCTGAAATGT+TGG | - | chr2_1:41182429-41182448 | Msa0207970:intron | 35.0% |
| !! | AAATGTTGGTTTATAGTGGC+AGG | - | chr2_1:41182443-41182462 | Msa0207970:intron | 35.0% |
| !! | AATGTTGGTTTATAGTGGCA+GGG | - | chr2_1:41182444-41182463 | Msa0207970:intron | 35.0% |
| TGGAGAAGATCATAACTCAA+TGG | - | chr2_1:41182500-41182519 | Msa0207970:intron | 35.0% | |
| AAGATCATAACTCAATGGCA+GGG | - | chr2_1:41182505-41182524 | Msa0207970:intron | 35.0% | |
| TGTTGAATTAGAGCAGAGTT+TGG | + | chr2_1:41182682-41182701 | None:intergenic | 35.0% | |
| AGAGTTACTCTTAACAGAAC+TGG | - | chr2_1:41183167-41183186 | Msa0207970:intron | 35.0% | |
| ! | TGTTGTGTGGTTTGTGTTTC+AGG | + | chr2_1:41181541-41181560 | None:intergenic | 40.0% |
| ! | CGCTTCGTTTTACTCAGATT+GGG | - | chr2_1:41181697-41181716 | Msa0207970:CDS | 40.0% |
| GCATATACACAAACTCACCT+AGG | + | chr2_1:41181754-41181773 | None:intergenic | 40.0% | |
| TTCAGTTTGATGTTCCATGG+TGG | - | chr2_1:41181910-41181929 | Msa0207970:CDS | 40.0% | |
| CAGAATAACAAACCCTAGGT+TGG | - | chr2_1:41182345-41182364 | Msa0207970:intron | 40.0% | |
| GAAGATCATAACTCAATGGC+AGG | - | chr2_1:41182504-41182523 | Msa0207970:intron | 40.0% | |
| GTATGAAGAAGTGGAGGATA+TGG | + | chr2_1:41182539-41182558 | None:intergenic | 40.0% | |
| CTATAGGTATGAAGAAGTGG+AGG | + | chr2_1:41182545-41182564 | None:intergenic | 40.0% | |
| ACGCTATAGGTATGAAGAAG+TGG | + | chr2_1:41182548-41182567 | None:intergenic | 40.0% | |
| ! | TCAGTTTTCAATTTTGCCGG+AGG | - | chr2_1:41183059-41183078 | Msa0207970:intron | 40.0% |
| AATGGCCAAGTCATAACAAC+AGG | - | chr2_1:41183137-41183156 | Msa0207970:intron | 40.0% | |
| CTGTTAAGAGTAACTCTTGC+TGG | + | chr2_1:41183164-41183183 | None:intergenic | 40.0% | |
| ACCATTCAAGGTCATTGTTC+CGG | - | chr2_1:41183209-41183228 | Msa0207970:intron | 40.0% | |
| TGATAACCGCAATGAGAACA+GGG | + | chr2_1:41183436-41183455 | None:intergenic | 40.0% | |
| ATGATAACCGCAATGAGAAC+AGG | + | chr2_1:41183437-41183456 | None:intergenic | 40.0% | |
| AGTCAAGCAAGCACATCAAA+CGG | + | chr2_1:41183539-41183558 | None:intergenic | 40.0% | |
| ! | TGTTGTGTGGTTTGTGTTTC+AGG | + | chr2_1:41181541-41181560 | None:intergenic | 40.0% |
| ! | CGCTTCGTTTTACTCAGATT+GGG | - | chr2_1:41181697-41181716 | Msa0207970:CDS | 40.0% |
| GCATATACACAAACTCACCT+AGG | + | chr2_1:41181754-41181773 | None:intergenic | 40.0% | |
| TTCAGTTTGATGTTCCATGG+TGG | - | chr2_1:41181910-41181929 | Msa0207970:CDS | 40.0% | |
| CAGAATAACAAACCCTAGGT+TGG | - | chr2_1:41182345-41182364 | Msa0207970:intron | 40.0% | |
| GAAGATCATAACTCAATGGC+AGG | - | chr2_1:41182504-41182523 | Msa0207970:intron | 40.0% | |
| GTATGAAGAAGTGGAGGATA+TGG | + | chr2_1:41182539-41182558 | None:intergenic | 40.0% | |
| CTATAGGTATGAAGAAGTGG+AGG | + | chr2_1:41182545-41182564 | None:intergenic | 40.0% | |
| ACGCTATAGGTATGAAGAAG+TGG | + | chr2_1:41182548-41182567 | None:intergenic | 40.0% | |
| ! | TCAGTTTTCAATTTTGCCGG+AGG | - | chr2_1:41183059-41183078 | Msa0207970:intron | 40.0% |
| AATGGCCAAGTCATAACAAC+AGG | - | chr2_1:41183137-41183156 | Msa0207970:intron | 40.0% | |
| CTGTTAAGAGTAACTCTTGC+TGG | + | chr2_1:41183164-41183183 | None:intergenic | 40.0% | |
| ACCATTCAAGGTCATTGTTC+CGG | - | chr2_1:41183209-41183228 | Msa0207970:intron | 40.0% | |
| TGATAACCGCAATGAGAACA+GGG | + | chr2_1:41183436-41183455 | None:intergenic | 40.0% | |
| ATGATAACCGCAATGAGAAC+AGG | + | chr2_1:41183437-41183456 | None:intergenic | 40.0% | |
| AGTCAAGCAAGCACATCAAA+CGG | + | chr2_1:41183539-41183558 | None:intergenic | 40.0% | |
| GAAGCAGCAGATCATACTGT+TGG | - | chr2_1:41181641-41181660 | Msa0207970:CDS | 45.0% | |
| ! | GCGCTTCGTTTTACTCAGAT+TGG | - | chr2_1:41181696-41181715 | Msa0207970:CDS | 45.0% |
| !! | AGCTCAGTTGGTAACTCAGT+TGG | - | chr2_1:41182369-41182388 | Msa0207970:intron | 45.0% |
| TGCTTACTTCAGCAACAGTG+TGG | + | chr2_1:41183085-41183104 | None:intergenic | 45.0% | |
| CACTGTTGCTGAAGTAAGCA+AGG | - | chr2_1:41183085-41183104 | Msa0207970:intron | 45.0% | |
| CTGGTCCTGTTGTTATGACT+TGG | + | chr2_1:41183145-41183164 | None:intergenic | 45.0% | |
| ACCGGAACAATGACCTTGAA+TGG | + | chr2_1:41183213-41183232 | None:intergenic | 45.0% | |
| ATTCAAGGTCATTGTTCCGG+TGG | - | chr2_1:41183212-41183231 | Msa0207970:intron | 45.0% | |
| GTAGGAGTAGTTCCTGATGT+AGG | + | chr2_1:41183314-41183333 | None:intergenic | 45.0% | |
| TACGTTCCCTGTTCTCATTG+CGG | - | chr2_1:41183427-41183446 | Msa0207970:CDS | 45.0% | |
| GAAGCAGCAGATCATACTGT+TGG | - | chr2_1:41181641-41181660 | Msa0207970:CDS | 45.0% | |
| ! | GCGCTTCGTTTTACTCAGAT+TGG | - | chr2_1:41181696-41181715 | Msa0207970:CDS | 45.0% |
| !! | AGCTCAGTTGGTAACTCAGT+TGG | - | chr2_1:41182369-41182388 | Msa0207970:intron | 45.0% |
| TGCTTACTTCAGCAACAGTG+TGG | + | chr2_1:41183085-41183104 | None:intergenic | 45.0% | |
| CACTGTTGCTGAAGTAAGCA+AGG | - | chr2_1:41183085-41183104 | Msa0207970:intron | 45.0% | |
| CTGGTCCTGTTGTTATGACT+TGG | + | chr2_1:41183145-41183164 | None:intergenic | 45.0% | |
| ACCGGAACAATGACCTTGAA+TGG | + | chr2_1:41183213-41183232 | None:intergenic | 45.0% | |
| ATTCAAGGTCATTGTTCCGG+TGG | - | chr2_1:41183212-41183231 | Msa0207970:intron | 45.0% | |
| GTAGGAGTAGTTCCTGATGT+AGG | + | chr2_1:41183314-41183333 | None:intergenic | 45.0% | |
| TACGTTCCCTGTTCTCATTG+CGG | - | chr2_1:41183427-41183446 | Msa0207970:CDS | 45.0% | |
| !! | ATCATTAATTTATTATTATT+GGG | + | chr2_1:41181936-41181955 | None:intergenic | 5.0% |
| !! | TATCATTAATTTATTATTAT+TGG | + | chr2_1:41181937-41181956 | None:intergenic | 5.0% |
| !! | AATAATAATAAATTAATGAT+AGG | - | chr2_1:41181936-41181955 | Msa0207970:CDS | 5.0% |
| !!! | ACAAATTATATATTTTTTTT+AGG | - | chr2_1:41183707-41183726 | Msa0207970:five_prime_UTR | 5.0% |
| !! | ATCATTAATTTATTATTATT+GGG | + | chr2_1:41181936-41181955 | None:intergenic | 5.0% |
| !! | TATCATTAATTTATTATTAT+TGG | + | chr2_1:41181937-41181956 | None:intergenic | 5.0% |
| !! | AATAATAATAAATTAATGAT+AGG | - | chr2_1:41181936-41181955 | Msa0207970:CDS | 5.0% |
| !!! | ACAAATTATATATTTTTTTT+AGG | - | chr2_1:41183707-41183726 | Msa0207970:five_prime_UTR | 5.0% |
| GCAGCAGATCATACTGTTGG+AGG | - | chr2_1:41181644-41181663 | Msa0207970:CDS | 50.0% | |
| ACTTGGAACACTCCAACCAG+TGG | + | chr2_1:41181672-41181691 | None:intergenic | 50.0% | |
| ! | ACTGGTTGGAGTGTTCCAAG+TGG | - | chr2_1:41181671-41181690 | Msa0207970:CDS | 50.0% |
| CCAACTGAGCTACCAACCTA+GGG | + | chr2_1:41182360-41182379 | None:intergenic | 50.0% | |
| ACCAACTGAGCTACCAACCT+AGG | + | chr2_1:41182361-41182380 | None:intergenic | 50.0% | |
| TGGCTAAACTCGCACGCTAT+AGG | + | chr2_1:41182561-41182580 | None:intergenic | 50.0% | |
| !! | AACGCTTAGCTTTTGGCCAC+CGG | + | chr2_1:41183231-41183250 | None:intergenic | 50.0% |
| GATGTAGGAGGAGTAGGAGA+AGG | + | chr2_1:41183281-41183300 | None:intergenic | 50.0% | |
| GGAGTAGATGTAGGAGGAGT+AGG | + | chr2_1:41183287-41183306 | None:intergenic | 50.0% | |
| GTAGGAGGAGGAGTAGATGT+AGG | + | chr2_1:41183296-41183315 | None:intergenic | 50.0% | |
| TCTACTCCTCCTCCTACATC+AGG | - | chr2_1:41183299-41183318 | Msa0207970:intron | 50.0% | |
| GTAGTTCCTGATGTAGGAGG+AGG | + | chr2_1:41183308-41183327 | None:intergenic | 50.0% | |
| GGAGTAGTTCCTGATGTAGG+AGG | + | chr2_1:41183311-41183330 | None:intergenic | 50.0% | |
| ! | GTGATGGAGGAGTTGCATCA+GGG | + | chr2_1:41183382-41183401 | None:intergenic | 50.0% |
| GCAGCAGATCATACTGTTGG+AGG | - | chr2_1:41181644-41181663 | Msa0207970:CDS | 50.0% | |
| ACTTGGAACACTCCAACCAG+TGG | + | chr2_1:41181672-41181691 | None:intergenic | 50.0% | |
| ! | ACTGGTTGGAGTGTTCCAAG+TGG | - | chr2_1:41181671-41181690 | Msa0207970:CDS | 50.0% |
| CCAACTGAGCTACCAACCTA+GGG | + | chr2_1:41182360-41182379 | None:intergenic | 50.0% | |
| ACCAACTGAGCTACCAACCT+AGG | + | chr2_1:41182361-41182380 | None:intergenic | 50.0% | |
| TGGCTAAACTCGCACGCTAT+AGG | + | chr2_1:41182561-41182580 | None:intergenic | 50.0% | |
| !! | AACGCTTAGCTTTTGGCCAC+CGG | + | chr2_1:41183231-41183250 | None:intergenic | 50.0% |
| GATGTAGGAGGAGTAGGAGA+AGG | + | chr2_1:41183281-41183300 | None:intergenic | 50.0% | |
| GGAGTAGATGTAGGAGGAGT+AGG | + | chr2_1:41183287-41183306 | None:intergenic | 50.0% | |
| GTAGGAGGAGGAGTAGATGT+AGG | + | chr2_1:41183296-41183315 | None:intergenic | 50.0% | |
| TCTACTCCTCCTCCTACATC+AGG | - | chr2_1:41183299-41183318 | Msa0207970:intron | 50.0% | |
| GTAGTTCCTGATGTAGGAGG+AGG | + | chr2_1:41183308-41183327 | None:intergenic | 50.0% | |
| GGAGTAGTTCCTGATGTAGG+AGG | + | chr2_1:41183311-41183330 | None:intergenic | 50.0% | |
| ! | GTGATGGAGGAGTTGCATCA+GGG | + | chr2_1:41183382-41183401 | None:intergenic | 50.0% |
| !! | CATACTGTTGGAGGCACCAC+TGG | - | chr2_1:41181653-41181672 | Msa0207970:CDS | 55.0% |
| ! | GGTTGGAGTGTTCCAAGTGG+CGG | - | chr2_1:41181674-41181693 | Msa0207970:CDS | 55.0% |
| !! | TAAAACGAAGCGCCGCCACT+TGG | + | chr2_1:41181689-41181708 | None:intergenic | 55.0% |
| !! | CCCTAGGTTGGTAGCTCAGT+TGG | - | chr2_1:41182357-41182376 | Msa0207970:intron | 55.0% |
| TTCAGCAACAGTGTGGCCTC+CGG | + | chr2_1:41183078-41183097 | None:intergenic | 55.0% | |
| AGGAGAAGGAGGAGAAGTCG+AGG | + | chr2_1:41183267-41183286 | None:intergenic | 55.0% | |
| GTAGGAGGAGTAGGAGAAGG+AGG | + | chr2_1:41183278-41183297 | None:intergenic | 55.0% | |
| GGAGGAGGAGTAGATGTAGG+AGG | + | chr2_1:41183293-41183312 | None:intergenic | 55.0% | |
| ACTCCTACTCCACCTACCAG+CGG | - | chr2_1:41183326-41183345 | Msa0207970:intron | 55.0% | |
| !! | GGTGATGGAGGAGTTGCATC+AGG | + | chr2_1:41183383-41183402 | None:intergenic | 55.0% |
| GATGCAACTCCTCCATCACC+AGG | - | chr2_1:41183383-41183402 | Msa0207970:CDS | 55.0% | |
| AGGGAACGTAGCAACGAGAG+TGG | + | chr2_1:41183417-41183436 | None:intergenic | 55.0% | |
| !! | CATACTGTTGGAGGCACCAC+TGG | - | chr2_1:41181653-41181672 | Msa0207970:CDS | 55.0% |
| ! | GGTTGGAGTGTTCCAAGTGG+CGG | - | chr2_1:41181674-41181693 | Msa0207970:CDS | 55.0% |
| !! | TAAAACGAAGCGCCGCCACT+TGG | + | chr2_1:41181689-41181708 | None:intergenic | 55.0% |
| !! | CCCTAGGTTGGTAGCTCAGT+TGG | - | chr2_1:41182357-41182376 | Msa0207970:intron | 55.0% |
| TTCAGCAACAGTGTGGCCTC+CGG | + | chr2_1:41183078-41183097 | None:intergenic | 55.0% | |
| AGGAGAAGGAGGAGAAGTCG+AGG | + | chr2_1:41183267-41183286 | None:intergenic | 55.0% | |
| GTAGGAGGAGTAGGAGAAGG+AGG | + | chr2_1:41183278-41183297 | None:intergenic | 55.0% | |
| GGAGGAGGAGTAGATGTAGG+AGG | + | chr2_1:41183293-41183312 | None:intergenic | 55.0% | |
| ACTCCTACTCCACCTACCAG+CGG | - | chr2_1:41183326-41183345 | Msa0207970:intron | 55.0% | |
| !! | GGTGATGGAGGAGTTGCATC+AGG | + | chr2_1:41183383-41183402 | None:intergenic | 55.0% |
| GATGCAACTCCTCCATCACC+AGG | - | chr2_1:41183383-41183402 | Msa0207970:CDS | 55.0% | |
| AGGGAACGTAGCAACGAGAG+TGG | + | chr2_1:41183417-41183436 | None:intergenic | 55.0% | |
| !! | CTGTTGGAGGCACCACTGGT+TGG | - | chr2_1:41181657-41181676 | Msa0207970:CDS | 60.0% |
| !! | GAAGGTGTTCCTCCGCTGGT+AGG | + | chr2_1:41183341-41183360 | None:intergenic | 60.0% |
| TGGAGGAGTTGCATCAGGGC+CGG | + | chr2_1:41183378-41183397 | None:intergenic | 60.0% | |
| !! | GTAGCTGAGCCTGGTGATGG+AGG | + | chr2_1:41183395-41183414 | None:intergenic | 60.0% |
| GTGGTAGCTGAGCCTGGTGA+TGG | + | chr2_1:41183398-41183417 | None:intergenic | 60.0% | |
| ACGAGAGTGGTAGCTGAGCC+TGG | + | chr2_1:41183404-41183423 | None:intergenic | 60.0% | |
| !! | CTGTTGGAGGCACCACTGGT+TGG | - | chr2_1:41181657-41181676 | Msa0207970:CDS | 60.0% |
| !! | GAAGGTGTTCCTCCGCTGGT+AGG | + | chr2_1:41183341-41183360 | None:intergenic | 60.0% |
| TGGAGGAGTTGCATCAGGGC+CGG | + | chr2_1:41183378-41183397 | None:intergenic | 60.0% | |
| !! | GTAGCTGAGCCTGGTGATGG+AGG | + | chr2_1:41183395-41183414 | None:intergenic | 60.0% |
| GTGGTAGCTGAGCCTGGTGA+TGG | + | chr2_1:41183398-41183417 | None:intergenic | 60.0% | |
| ACGAGAGTGGTAGCTGAGCC+TGG | + | chr2_1:41183404-41183423 | None:intergenic | 60.0% | |
| CCTCCGCTGGTAGGTGGAGT+AGG | + | chr2_1:41183332-41183351 | None:intergenic | 65.0% | |
| CCTACTCCACCTACCAGCGG+AGG | - | chr2_1:41183329-41183348 | Msa0207970:intron | 65.0% | |
| GGTGTTCCTCCGCTGGTAGG+TGG | + | chr2_1:41183338-41183357 | None:intergenic | 65.0% | |
| CCTTCGCCGTCATCTCCCAC+CGG | - | chr2_1:41183356-41183375 | Msa0207970:CDS | 65.0% | |
| TCAGGGCCGGTGGGAGATGA+CGG | + | chr2_1:41183365-41183384 | None:intergenic | 65.0% | |
| GGAGTTGCATCAGGGCCGGT+GGG | + | chr2_1:41183374-41183393 | None:intergenic | 65.0% | |
| AGGAGTTGCATCAGGGCCGG+TGG | + | chr2_1:41183375-41183394 | None:intergenic | 65.0% | |
| CCTCCGCTGGTAGGTGGAGT+AGG | + | chr2_1:41183332-41183351 | None:intergenic | 65.0% | |
| CCTACTCCACCTACCAGCGG+AGG | - | chr2_1:41183329-41183348 | Msa0207970:intron | 65.0% | |
| GGTGTTCCTCCGCTGGTAGG+TGG | + | chr2_1:41183338-41183357 | None:intergenic | 65.0% | |
| CCTTCGCCGTCATCTCCCAC+CGG | - | chr2_1:41183356-41183375 | Msa0207970:CDS | 65.0% | |
| TCAGGGCCGGTGGGAGATGA+CGG | + | chr2_1:41183365-41183384 | None:intergenic | 65.0% | |
| GGAGTTGCATCAGGGCCGGT+GGG | + | chr2_1:41183374-41183393 | None:intergenic | 65.0% | |
| AGGAGTTGCATCAGGGCCGG+TGG | + | chr2_1:41183375-41183394 | None:intergenic | 65.0% | |
| !! | CGGCGAAGGTGTTCCTCCGC+TGG | + | chr2_1:41183345-41183364 | None:intergenic | 70.0% |
| ! | CCGGTGGGAGATGACGGCGA+AGG | + | chr2_1:41183359-41183378 | None:intergenic | 70.0% |
| !! | CGGCGAAGGTGTTCCTCCGC+TGG | + | chr2_1:41183345-41183364 | None:intergenic | 70.0% |
| ! | CCGGTGGGAGATGACGGCGA+AGG | + | chr2_1:41183359-41183378 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 41181340 | 41183753 | 41181340 | ID=Msa0207970;Name=Msa0207970 |
| chr2_1 | mRNA | 41181340 | 41183753 | 41181340 | ID=Msa0207970-mRNA-1;Parent=Msa0207970;Name=Msa0207970-mRNA-1;_AED=0.00;_eAED=0.00;_QI=232|1|1|1|1|1|2|281|197 |
| chr2_1 | exon | 41181340 | 41182030 | 41181340 | ID=Msa0207970-mRNA-1:exon:12639;Parent=Msa0207970-mRNA-1 |
| chr2_1 | exon | 41183338 | 41183753 | 41183338 | ID=Msa0207970-mRNA-1:exon:12638;Parent=Msa0207970-mRNA-1 |
| chr2_1 | five_prime_UTR | 41183522 | 41183753 | 41183522 | ID=Msa0207970-mRNA-1:five_prime_utr;Parent=Msa0207970-mRNA-1 |
| chr2_1 | CDS | 41183338 | 41183521 | 41183338 | ID=Msa0207970-mRNA-1:cds;Parent=Msa0207970-mRNA-1 |
| chr2_1 | CDS | 41181621 | 41182030 | 41181621 | ID=Msa0207970-mRNA-1:cds;Parent=Msa0207970-mRNA-1 |
| chr2_1 | three_prime_UTR | 41181340 | 41181620 | 41181340 | ID=Msa0207970-mRNA-1:three_prime_utr;Parent=Msa0207970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
