Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0902750 | XP_003609752.1 | 76.684 | 193 | 6 | 1 | 1 | 154 | 1 | 193 | 4.23e-97 | 288 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0902750 | sp|O04834|SAR1A_ARATH | 69.948 | 193 | 19 | 1 | 1 | 154 | 1 | 193 | 1.56e-93 | 271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0902750 | G7JMT4 | 76.684 | 193 | 6 | 1 | 1 | 154 | 1 | 193 | 2.02e-97 | 288 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004920 | Msa0902750 | 0.808744 | 2.663783e-50 | -8.615850e-47 |
| Msa0011170 | Msa0902750 | 0.806146 | 9.476345e-50 | -8.615850e-47 |
| Msa0020930 | Msa0902750 | 0.818422 | 1.977010e-52 | -8.615850e-47 |
| Msa0040450 | Msa0902750 | 0.825188 | 5.372115e-54 | -8.615850e-47 |
| Msa0068680 | Msa0902750 | 0.813483 | 2.501620e-51 | -8.615850e-47 |
| Msa0077610 | Msa0902750 | 0.801658 | 8.114073e-49 | -8.615850e-47 |
| Msa0077670 | Msa0902750 | 0.801186 | 1.014015e-48 | -8.615850e-47 |
| Msa0081930 | Msa0902750 | 0.808584 | 2.882839e-50 | -8.615850e-47 |
| Msa0112750 | Msa0902750 | 0.804802 | 1.813684e-49 | -8.615850e-47 |
| Msa0114060 | Msa0902750 | 0.802025 | 6.823855e-49 | -8.615850e-47 |
| Msa0616020 | Msa0902750 | 0.803741 | 3.016666e-49 | -8.615850e-47 |
| Msa0633840 | Msa0902750 | 0.800636 | 1.313023e-48 | -8.615850e-47 |
| Msa0638070 | Msa0902750 | 0.807334 | 5.317764e-50 | -8.615850e-47 |
| Msa0643180 | Msa0902750 | 0.815913 | 7.246238e-52 | -8.615850e-47 |
| Msa0657970 | Msa0902750 | 0.823209 | 1.566582e-53 | -8.615850e-47 |
| Msa0689800 | Msa0902750 | 0.822536 | 2.247521e-53 | -8.615850e-47 |
| Msa0693380 | Msa0902750 | 0.841290 | 5.197468e-58 | -8.615850e-47 |
| Msa0696640 | Msa0902750 | 0.802525 | 5.383804e-49 | -8.615850e-47 |
| Msa0698400 | Msa0902750 | 0.800830 | 1.198726e-48 | -8.615850e-47 |
| Msa0708520 | Msa0902750 | 0.832558 | 8.825527e-56 | -8.615850e-47 |
| Msa0744040 | Msa0902750 | 0.800626 | 1.319625e-48 | -8.615850e-47 |
| Msa0767300 | Msa0902750 | 0.811425 | 7.045558e-51 | -8.615850e-47 |
| Msa0778520 | Msa0902750 | 0.812537 | 4.033703e-51 | -8.615850e-47 |
| Msa0779320 | Msa0902750 | 0.806214 | 9.172246e-50 | -8.615850e-47 |
| Msa0816590 | Msa0902750 | 0.815968 | 7.042442e-52 | -8.615850e-47 |
| Msa0816700 | Msa0902750 | 0.804982 | 1.662889e-49 | -8.615850e-47 |
| Msa0824660 | Msa0902750 | 0.804639 | 1.961507e-49 | -8.615850e-47 |
| Msa0128020 | Msa0902750 | 0.808498 | 3.007016e-50 | -8.615850e-47 |
| Msa0159930 | Msa0902750 | 0.813861 | 2.065361e-51 | -8.615850e-47 |
| Msa0197660 | Msa0902750 | 0.804141 | 2.490395e-49 | -8.615850e-47 |
| Msa0205850 | Msa0902750 | 0.808638 | 2.806843e-50 | -8.615850e-47 |
| Msa0220580 | Msa0902750 | 0.815440 | 9.233007e-52 | -8.615850e-47 |
| Msa0366240 | Msa0902750 | 0.813382 | 2.632936e-51 | -8.615850e-47 |
| Msa0410650 | Msa0902750 | 0.810438 | 1.152723e-50 | -8.615850e-47 |
| Msa0432770 | Msa0902750 | 0.801183 | 1.015338e-48 | -8.615850e-47 |
| Msa0433640 | Msa0902750 | 0.804394 | 2.206265e-49 | -8.615850e-47 |
| Msa0470690 | Msa0902750 | 0.804042 | 2.611323e-49 | -8.615850e-47 |
| Msa0479170 | Msa0902750 | 0.807733 | 4.376761e-50 | -8.615850e-47 |
| Msa0239800 | Msa0902750 | 0.810201 | 1.296550e-50 | -8.615850e-47 |
| Msa0244860 | Msa0902750 | 0.813671 | 2.275130e-51 | -8.615850e-47 |
| Msa0264150 | Msa0902750 | 0.800061 | 1.719476e-48 | -8.615850e-47 |
| Msa0276920 | Msa0902750 | 0.801268 | 9.755378e-49 | -8.615850e-47 |
| Msa0282250 | Msa0902750 | 0.808401 | 3.153359e-50 | -8.615850e-47 |
| Msa0283450 | Msa0902750 | 0.812239 | 4.686708e-51 | -8.615850e-47 |
| Msa0283520 | Msa0902750 | 0.817206 | 3.719176e-52 | -8.615850e-47 |
| Msa0288100 | Msa0902750 | 0.800511 | 1.392820e-48 | -8.615850e-47 |
| Msa0309770 | Msa0902750 | 0.830774 | 2.429558e-55 | -8.615850e-47 |
| Msa0317510 | Msa0902750 | 0.810432 | 1.156310e-50 | -8.615850e-47 |
| Msa0332000 | Msa0902750 | 0.810772 | 9.763447e-51 | -8.615850e-47 |
| Msa0333720 | Msa0902750 | -0.805812 | 1.114218e-49 | -8.615850e-47 |
| Msa0336250 | Msa0902750 | 0.800021 | 1.752235e-48 | -8.615850e-47 |
| Msa0484780 | Msa0902750 | 0.839901 | 1.200974e-57 | -8.615850e-47 |
| Msa0505770 | Msa0902750 | 0.804303 | 2.304907e-49 | -8.615850e-47 |
| Msa0507680 | Msa0902750 | 0.823939 | 1.057085e-53 | -8.615850e-47 |
| Msa0512900 | Msa0902750 | 0.807337 | 5.310972e-50 | -8.615850e-47 |
| Msa0521540 | Msa0902750 | 0.801409 | 9.127617e-49 | -8.615850e-47 |
| Msa0523460 | Msa0902750 | 0.809176 | 2.153873e-50 | -8.615850e-47 |
| Msa0526890 | Msa0902750 | 0.812129 | 4.951037e-51 | -8.615850e-47 |
| Msa0546680 | Msa0902750 | 0.811378 | 7.213756e-51 | -8.615850e-47 |
| Msa0552490 | Msa0902750 | 0.811765 | 5.944911e-51 | -8.615850e-47 |
| Msa0557070 | Msa0902750 | 0.807229 | 5.598067e-50 | -8.615850e-47 |
| Msa0563840 | Msa0902750 | 0.803513 | 3.362717e-49 | -8.615850e-47 |
| Msa0577500 | Msa0902750 | 0.806384 | 8.444046e-50 | -8.615850e-47 |
| Msa0593650 | Msa0902750 | 0.813932 | 1.993047e-51 | -8.615850e-47 |
| Msa0876200 | Msa0902750 | 0.827825 | 1.263033e-54 | -8.615850e-47 |
| Msa0902750 | Msa0938220 | 0.803192 | 3.920128e-49 | -8.615850e-47 |
| Msa0902750 | Msa0945970 | 0.810086 | 1.372848e-50 | -8.615850e-47 |
| Msa0902750 | Msa0979010 | 0.828569 | 8.358430e-55 | -8.615850e-47 |
| Msa0902750 | Msa1013410 | 0.854409 | 1.254624e-61 | -8.615850e-47 |
| Msa0902750 | Msa1082500 | 0.860544 | 1.918651e-63 | -8.615850e-47 |
| Msa0902750 | Msa1085200 | 0.811879 | 5.614551e-51 | -8.615850e-47 |
| Msa0902750 | Msa1093520 | 0.903645 | 2.799424e-79 | -8.615850e-47 |
| Msa0902750 | Msa1131220 | 0.820208 | 7.746272e-53 | -8.615850e-47 |
| Msa0902750 | Msa1165520 | 0.809202 | 2.125663e-50 | -8.615850e-47 |
| Msa0902750 | Msa1172670 | 0.801367 | 9.311212e-49 | -8.615850e-47 |
| Msa0902750 | Msa1201560 | 0.806582 | 7.670895e-50 | -8.615850e-47 |
| Msa0902750 | Msa1214890 | 0.801138 | 1.037132e-48 | -8.615850e-47 |
| Msa0902750 | Msa1228590 | 0.800651 | 1.304290e-48 | -8.615850e-47 |
| Msa0902750 | Msa1238930 | 0.803054 | 4.185776e-49 | -8.615850e-47 |
| Msa0902750 | Msa1255040 | -0.801314 | 9.544499e-49 | -8.615850e-47 |
| Msa0902750 | Msa1270610 | 0.820503 | 6.625860e-53 | -8.615850e-47 |
| Msa0902750 | Msa1283860 | 0.803985 | 2.683487e-49 | -8.615850e-47 |
| Msa0902750 | Msa1305340 | 0.806552 | 7.784372e-50 | -8.615850e-47 |
| Msa0902750 | Msa1306840 | 0.803999 | 2.666475e-49 | -8.615850e-47 |
| Msa0902750 | Msa1340260 | 0.818066 | 2.379227e-52 | -8.615850e-47 |
| Msa0902750 | Msa1340270 | 0.808546 | 2.937038e-50 | -8.615850e-47 |
| Msa0902750 | Msa1340650 | 0.814366 | 1.598037e-51 | -8.615850e-47 |
| Msa0902750 | Msa1343070 | 0.814519 | 1.478095e-51 | -8.615850e-47 |
| Msa0902750 | Msa1371430 | 0.815376 | 9.540991e-52 | -8.615850e-47 |
| Msa0902750 | Msa1409870 | 0.814097 | 1.832551e-51 | -8.615850e-47 |
| Msa0902750 | Msa1420140 | 0.804550 | 2.047466e-49 | -8.615850e-47 |
| Msa0902750 | Msa1425100 | 0.800106 | 1.683491e-48 | -8.615850e-47 |
| Msa0902750 | Msa1460050 | 0.804772 | 1.840299e-49 | -8.615850e-47 |
| Msa0902750 | Msa1463670 | 0.804115 | 2.521691e-49 | -8.615850e-47 |
| Msa0902750 | Msa1464810 | 0.808240 | 3.413075e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0902750 | MtrunA17_Chr4g0068171 | 76.684 | 193 | 6 | 1 | 1 | 154 | 1 | 193 | 3.89e-101 | 288 |
| Msa0902750 | MtrunA17_Chr2g0294701 | 73.057 | 193 | 13 | 1 | 1 | 154 | 1 | 193 | 7.51e-98 | 280 |
| Msa0902750 | MtrunA17_Chr7g0271761 | 69.430 | 193 | 20 | 1 | 1 | 154 | 1 | 193 | 4.01e-94 | 270 |
| Msa0902750 | MtrunA17_Chr8g0373271 | 35.246 | 122 | 68 | 1 | 32 | 153 | 67 | 177 | 1.35e-15 | 70.1 |
| Msa0902750 | MtrunA17_Chr5g0434561 | 43.210 | 81 | 46 | 0 | 32 | 112 | 71 | 151 | 2.74e-15 | 69.3 |
| Msa0902750 | MtrunA17_Chr4g0012371 | 33.333 | 123 | 70 | 1 | 32 | 154 | 52 | 162 | 3.29e-15 | 68.9 |
| Msa0902750 | MtrunA17_Chr4g0072861 | 27.273 | 176 | 77 | 2 | 18 | 154 | 15 | 178 | 4.50e-14 | 66.2 |
| Msa0902750 | MtrunA17_Chr2g0287721 | 40.741 | 81 | 48 | 0 | 32 | 112 | 75 | 155 | 9.43e-14 | 65.9 |
| Msa0902750 | MtrunA17_Chr5g0401071 | 33.333 | 123 | 70 | 1 | 32 | 154 | 71 | 181 | 1.17e-13 | 65.1 |
| Msa0902750 | MtrunA17_Chr5g0401761 | 29.839 | 124 | 71 | 2 | 32 | 153 | 68 | 177 | 4.72e-13 | 63.5 |
| Msa0902750 | MtrunA17_Chr5g0395631 | 29.268 | 123 | 75 | 1 | 32 | 154 | 68 | 178 | 4.80e-13 | 63.5 |
| Msa0902750 | MtrunA17_Chr4g0039591 | 29.268 | 123 | 75 | 1 | 32 | 154 | 68 | 178 | 5.41e-13 | 63.5 |
| Msa0902750 | MtrunA17_Chr6g0450081 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 1.46e-11 | 59.3 |
| Msa0902750 | MtrunA17_Chr5g0413451 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 1.48e-11 | 59.3 |
| Msa0902750 | MtrunA17_Chr5g0413441 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 1.48e-11 | 59.3 |
| Msa0902750 | MtrunA17_Chr1g0194261 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 1.54e-11 | 59.3 |
| Msa0902750 | MtrunA17_Chr7g0270301 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 1.66e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0902750 | AT4G02080.1 | 69.948 | 193 | 19 | 1 | 1 | 154 | 1 | 193 | 1.59e-94 | 271 |
| Msa0902750 | AT3G62560.1 | 70.312 | 192 | 18 | 1 | 1 | 153 | 1 | 192 | 2.09e-93 | 269 |
| Msa0902750 | AT1G56330.1 | 70.312 | 192 | 18 | 1 | 1 | 153 | 1 | 192 | 8.58e-93 | 267 |
| Msa0902750 | AT1G09180.1 | 66.839 | 193 | 25 | 1 | 1 | 154 | 1 | 193 | 5.61e-87 | 253 |
| Msa0902750 | AT1G02620.1 | 84.685 | 111 | 17 | 0 | 44 | 154 | 12 | 122 | 4.81e-68 | 202 |
| Msa0902750 | AT3G49870.2 | 36.585 | 123 | 66 | 1 | 32 | 154 | 52 | 162 | 4.43e-18 | 76.6 |
| Msa0902750 | AT3G49870.1 | 36.585 | 123 | 66 | 1 | 32 | 154 | 71 | 181 | 7.62e-18 | 76.6 |
| Msa0902750 | AT5G67560.1 | 35.772 | 123 | 67 | 1 | 32 | 154 | 71 | 181 | 4.33e-17 | 74.3 |
| Msa0902750 | AT2G18390.1 | 36.066 | 122 | 67 | 1 | 32 | 153 | 67 | 177 | 1.23e-16 | 73.2 |
| Msa0902750 | AT5G37680.2 | 45.122 | 82 | 45 | 0 | 32 | 113 | 24 | 105 | 2.86e-16 | 71.2 |
| Msa0902750 | AT5G37680.1 | 45.122 | 82 | 45 | 0 | 32 | 113 | 71 | 152 | 5.40e-16 | 71.6 |
| Msa0902750 | AT3G49860.1 | 43.373 | 83 | 47 | 0 | 32 | 114 | 63 | 145 | 2.48e-15 | 69.7 |
| Msa0902750 | AT2G24765.1 | 27.841 | 176 | 76 | 2 | 18 | 154 | 15 | 178 | 1.21e-13 | 65.5 |
| Msa0902750 | AT5G17060.2 | 30.081 | 123 | 74 | 1 | 32 | 154 | 68 | 178 | 9.33e-13 | 63.2 |
| Msa0902750 | AT5G17060.1 | 30.081 | 123 | 74 | 1 | 32 | 154 | 68 | 178 | 9.33e-13 | 63.2 |
| Msa0902750 | AT5G52210.1 | 40.217 | 92 | 51 | 1 | 21 | 112 | 68 | 155 | 1.53e-12 | 62.8 |
| Msa0902750 | AT5G52210.2 | 40.217 | 92 | 51 | 1 | 21 | 112 | 68 | 155 | 1.53e-12 | 62.8 |
| Msa0902750 | AT3G03120.1 | 30.081 | 123 | 74 | 2 | 32 | 154 | 68 | 178 | 1.93e-11 | 59.7 |
| Msa0902750 | AT5G14670.2 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 2.04e-11 | 59.3 |
| Msa0902750 | AT5G14670.3 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 2.04e-11 | 59.3 |
| Msa0902750 | AT3G62290.3 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 2.11e-11 | 59.3 |
| Msa0902750 | AT3G62290.1 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 2.11e-11 | 59.3 |
| Msa0902750 | AT3G62290.2 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 2.11e-11 | 59.3 |
| Msa0902750 | AT1G10630.1 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 2.26e-11 | 59.3 |
| Msa0902750 | AT1G10630.2 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 2.26e-11 | 59.3 |
| Msa0902750 | AT1G23490.1 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 2.36e-11 | 59.3 |
| Msa0902750 | AT1G70490.2 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 2.36e-11 | 59.3 |
| Msa0902750 | AT1G70490.7 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 2.36e-11 | 59.3 |
| Msa0902750 | AT1G70490.4 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 2.36e-11 | 59.3 |
| Msa0902750 | AT1G70490.3 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 2.36e-11 | 59.3 |
| Msa0902750 | AT1G70490.1 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 2.36e-11 | 59.3 |
| Msa0902750 | AT1G70490.6 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 2.36e-11 | 59.3 |
| Msa0902750 | AT1G70490.5 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 2.36e-11 | 59.3 |
| Msa0902750 | AT2G47170.2 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 2.36e-11 | 59.3 |
| Msa0902750 | AT2G47170.1 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 2.36e-11 | 59.3 |
| Msa0902750 | AT2G47170.3 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 2.36e-11 | 59.3 |
| Msa0902750 | AT5G14670.1 | 28.226 | 124 | 73 | 2 | 32 | 153 | 68 | 177 | 2.44e-11 | 59.3 |
| Msa0902750 | AT2G15310.1 | 28.689 | 122 | 75 | 1 | 32 | 153 | 68 | 177 | 2.95e-11 | 59.3 |
Find 146 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTCTATCATTGTAAATTT+TGG | 0.043503 | 6_1:-102526879 | None:intergenic |
| TAACCCTAGGAATAAAATTT+TGG | 0.136968 | 6_1:-102522621 | None:intergenic |
| TGAGCCAGCTTGCTGATTTC+AGG | 0.142562 | 6_1:-102524355 | None:intergenic |
| TCCAGCTCTTTCTTTGATTC+TGG | 0.177361 | 6_1:-102523365 | None:intergenic |
| CCTGAAGATCCGTAACATTT+TGG | 0.186186 | 6_1:-102526577 | None:intergenic |
| CGTTCAGAAGTCAAATATTT+TGG | 0.194320 | 6_1:+102523942 | Msa0902750:three_prime_UTR |
| GCTTTCTCAGTATATTAAAT+AGG | 0.199871 | 6_1:+102523616 | Msa0902750:CDS |
| ACTGCAACTGGTTCACTTAA+TGG | 0.213496 | 6_1:-102526497 | None:intergenic |
| TATACTTTGCTCATGTAAAT+TGG | 0.251390 | 6_1:+102523715 | Msa0902750:three_prime_UTR |
| ATTTCCTTATTCTAAAATTT+AGG | 0.269179 | 6_1:+102524245 | Msa0902750:three_prime_UTR |
| GGAGTCATAAAGATTAATTT+TGG | 0.288659 | 6_1:-102523522 | None:intergenic |
| TAGCATTAGGACACGTATTC+AGG | 0.296692 | 6_1:+102526145 | Msa0902750:three_prime_UTR |
| GCCAGTGCACAAGGAATTTC+AGG | 0.300628 | 6_1:+102525337 | Msa0902750:three_prime_UTR |
| ATTGTAAGTTAAGTAGTTAT+TGG | 0.307541 | 6_1:+102524277 | Msa0902750:three_prime_UTR |
| AGAATAAGGAAATGATATAA+AGG | 0.321012 | 6_1:-102524235 | None:intergenic |
| CCTGATAATGGAGAGATTCT+AGG | 0.325252 | 6_1:+102526066 | Msa0902750:three_prime_UTR |
| CGTAATATTGATTATCATAC+TGG | 0.328135 | 6_1:+102524397 | Msa0902750:three_prime_UTR |
| AATGTACCTTTCCTTATCTT+AGG | 0.333519 | 6_1:+102523416 | Msa0902750:CDS |
| AATCTAACCATGCTGATTTC+AGG | 0.335531 | 6_1:-102525504 | None:intergenic |
| TCCTTTGGTTAACAATCTTC+AGG | 0.337795 | 6_1:+102523901 | Msa0902750:three_prime_UTR |
| ATTGGATAATAATAGTTAAA+TGG | 0.341144 | 6_1:+102523733 | Msa0902750:three_prime_UTR |
| TCCAGACTCTACGAGCAATT+TGG | 0.346671 | 6_1:-102522664 | None:intergenic |
| TGACTCCAATGTCCGTCCTT+TGG | 0.348016 | 6_1:+102523538 | Msa0902750:CDS |
| CTGCAACTGGTTCACTTAAT+GGG | 0.354500 | 6_1:-102526496 | None:intergenic |
| CCAAAATGTTACGGATCTTC+AGG | 0.360126 | 6_1:+102526577 | Msa0902750:three_prime_UTR |
| CAGTATGATAATCAATATTA+CGG | 0.362689 | 6_1:-102524396 | None:intergenic |
| CTATAGCATTAGATGCTTCA+TGG | 0.368182 | 6_1:-102526125 | None:intergenic |
| CTAGGGTTAGATAATGCTTT+GGG | 0.376830 | 6_1:+102522635 | Msa0902750:CDS |
| ACCAAATTGCTCGTAGAGTC+TGG | 0.380274 | 6_1:+102522663 | Msa0902750:CDS |
| GCATCTAATGCTATAGCATT+AGG | 0.384398 | 6_1:+102526132 | Msa0902750:three_prime_UTR |
| GTTACCTCCAAAGTGTCCTT+TGG | 0.391743 | 6_1:-102524584 | None:intergenic |
| TACAAATGCTTTGTGTTTGT+TGG | 0.395096 | 6_1:+102523870 | Msa0902750:three_prime_UTR |
| CCTAGGGTTAGATAATGCTT+TGG | 0.395113 | 6_1:+102522634 | Msa0902750:CDS |
| AACACGTTTGGCAGACAATT+AGG | 0.396341 | 6_1:+102524072 | Msa0902750:three_prime_UTR |
| CCTAGAATCTCTCCATTATC+AGG | 0.396965 | 6_1:-102526066 | None:intergenic |
| AATTGCAGAATTAATAATAG+TGG | 0.399953 | 6_1:+102523838 | Msa0902750:three_prime_UTR |
| TGGGAAGATTAGACTGCAAC+TGG | 0.404507 | 6_1:-102526509 | None:intergenic |
| TATGGAATTCTTGCCACCCT+TGG | 0.405501 | 6_1:+102522581 | Msa0902750:CDS |
| TTGATATACAGACCTGATAA+TGG | 0.414145 | 6_1:+102526054 | Msa0902750:three_prime_UTR |
| CTTTCTCAGTATATTAAATA+GGG | 0.415038 | 6_1:+102523617 | Msa0902750:CDS |
| CAATCTTGTTTCCTAAGATA+AGG | 0.427363 | 6_1:-102523427 | None:intergenic |
| AGTATGATAATCAATATTAC+GGG | 0.429672 | 6_1:-102524395 | None:intergenic |
| AGTAGTTATTGGTATTATGC+AGG | 0.433487 | 6_1:+102524288 | Msa0902750:three_prime_UTR |
| GATTGCCACTGATCTGATAA+TGG | 0.437463 | 6_1:+102526654 | Msa0902750:three_prime_UTR |
| AGTCCTAGACCTTGTGTGAA+TGG | 0.442848 | 6_1:-102525013 | None:intergenic |
| TGGTTCAAGTTCAACACGTT+TGG | 0.445935 | 6_1:+102524060 | Msa0902750:three_prime_UTR |
| ACAAATGCTTTGTGTTTGTT+GGG | 0.446006 | 6_1:+102523871 | Msa0902750:three_prime_UTR |
| GCTTTAGATCAGCTTATGCC+TGG | 0.451191 | 6_1:+102524325 | Msa0902750:three_prime_UTR |
| ATTCAGAATCCTGTAAAAGA+AGG | 0.453387 | 6_1:+102526616 | Msa0902750:three_prime_UTR |
| GTACCTCATCTATACTGTAT+TGG | 0.453782 | 6_1:+102525280 | Msa0902750:three_prime_UTR |
| AATCAGCAAGCTGGCTCAAA+GGG | 0.462946 | 6_1:+102524360 | Msa0902750:three_prime_UTR |
| ATTGTTCGCAAGATGGGATA+TGG | 0.464211 | 6_1:+102523578 | Msa0902750:CDS |
| TACTGTATTGGAGACGCAAA+TGG | 0.467562 | 6_1:+102525292 | Msa0902750:three_prime_UTR |
| TCATCATCTGATGCAGCATA+AGG | 0.468650 | 6_1:-102523455 | None:intergenic |
| AAGGGAGAAAGGTGAAAAGG+AGG | 0.480204 | 6_1:+102525728 | Msa0902750:three_prime_UTR |
| TGTAGTATTGTTCGCAAGAT+GGG | 0.483741 | 6_1:+102523572 | Msa0902750:CDS |
| GATGCTGCACTAATAGCAAC+TGG | 0.484442 | 6_1:+102524983 | Msa0902750:three_prime_UTR |
| CTCCAATGTCCGTCCTTTGG+AGG | 0.487360 | 6_1:+102523541 | Msa0902750:CDS |
| TAGGGACTTCCAAAATGTTA+CGG | 0.491221 | 6_1:+102526568 | Msa0902750:three_prime_UTR |
| GGATGAGTGAAACATGCAGC+TGG | 0.497795 | 6_1:-102525483 | None:intergenic |
| AAAGTGGCCTAGTTTATCAC+TGG | 0.499108 | 6_1:+102526816 | Msa0902750:three_prime_UTR |
| TAAGGAGCCAAAGGACACTT+TGG | 0.499940 | 6_1:+102524577 | Msa0902750:three_prime_UTR |
| TCACCTTTCTCCCTTGCTTG+AGG | 0.500335 | 6_1:-102525720 | None:intergenic |
| TTGTTGGGCAGTGCTTCCTT+TGG | 0.501317 | 6_1:+102523886 | Msa0902750:three_prime_UTR |
| AGCAAGGGAGAAAGGTGAAA+AGG | 0.501828 | 6_1:+102525725 | Msa0902750:three_prime_UTR |
| CAGCCTCAAGCAAGGGAGAA+AGG | 0.504880 | 6_1:+102525717 | Msa0902750:intron |
| GGCTTGACTAACTTCACTAC+AGG | 0.510272 | 6_1:+102523494 | Msa0902750:CDS |
| AGGGAGAAAGGTGAAAAGGA+GGG | 0.510730 | 6_1:+102525729 | Msa0902750:three_prime_UTR |
| ACCTGAAATTCCTTGTGCAC+TGG | 0.512161 | 6_1:-102525338 | None:intergenic |
| AAATCAGCAAGCTGGCTCAA+AGG | 0.512433 | 6_1:+102524359 | Msa0902750:three_prime_UTR |
| CTGATTTCAGGATCAAATCC+AGG | 0.516995 | 6_1:-102524343 | None:intergenic |
| TCAATAAGTTCGATCAAGAC+AGG | 0.518596 | 6_1:-102524545 | None:intergenic |
| AAAATTTGCAGCCTCAAGCA+AGG | 0.522301 | 6_1:+102525709 | Msa0902750:intron |
| GTGTAGTATTGTTCGCAAGA+TGG | 0.522465 | 6_1:+102523571 | Msa0902750:CDS |
| CAATACAAGTAACATTCGTC+GGG | 0.526016 | 6_1:-102526680 | None:intergenic |
| TTGCTAATATTTCATTTCGG+AGG | 0.526725 | 6_1:+102524158 | Msa0902750:three_prime_UTR |
| ATAAACTAGGCCACTTTCAA+AGG | 0.529134 | 6_1:-102526810 | None:intergenic |
| CCTAGTTGTAGTTATCGAGA+AGG | 0.532785 | 6_1:+102526787 | Msa0902750:three_prime_UTR |
| TGCAGTAATGTTAAGACACT+TGG | 0.533131 | 6_1:+102523994 | Msa0902750:three_prime_UTR |
| GCTCCATTCACACAAGGTCT+AGG | 0.533671 | 6_1:+102525010 | Msa0902750:three_prime_UTR |
| AAAAGAAGGGAACCGTTTGA+AGG | 0.534181 | 6_1:+102526630 | Msa0902750:three_prime_UTR |
| TGCTAATATTTCATTTCGGA+GGG | 0.534526 | 6_1:+102524159 | Msa0902750:three_prime_UTR |
| CCTTCTCGATAACTACAACT+AGG | 0.534760 | 6_1:-102526787 | None:intergenic |
| TTCTTGCCACCCTTGGTCTG+TGG | 0.534886 | 6_1:+102522588 | Msa0902750:CDS |
| TAGTTCTGAAACATGCATGT+AGG | 0.538317 | 6_1:+102523776 | Msa0902750:three_prime_UTR |
| ACACGCATGCGCTCGTCCAC+AGG | 0.538640 | 6_1:-102525158 | None:intergenic |
| TCAATACAAGTAACATTCGT+CGG | 0.539217 | 6_1:-102526681 | None:intergenic |
| GCTCATGCCGCCAGTGCACA+AGG | 0.540940 | 6_1:+102525328 | Msa0902750:three_prime_UTR |
| ATCGAGAAGGCCTTTGAAAG+TGG | 0.543539 | 6_1:+102526800 | Msa0902750:three_prime_UTR |
| TCAAGAACCTCGGACAGAGT+TGG | 0.543981 | 6_1:-102526307 | None:intergenic |
| CTTATAGATCACACCTGCAA+GGG | 0.545313 | 6_1:+102524514 | Msa0902750:intron |
| ATGCGTGTAATTGATGCAAA+TGG | 0.545518 | 6_1:+102525173 | Msa0902750:three_prime_UTR |
| AATTGATGCAAATGGAAAGC+TGG | 0.545580 | 6_1:+102525181 | Msa0902750:three_prime_UTR |
| CAGTGGCAATCTCCTTCAAA+CGG | 0.546179 | 6_1:-102526642 | None:intergenic |
| TCCAGAATCAAAGAAAGAGC+TGG | 0.549416 | 6_1:+102523364 | Msa0902750:CDS |
| GTTGTCCCTCTCTGTCAAGA+TGG | 0.549948 | 6_1:+102524040 | Msa0902750:three_prime_UTR |
| AAAGCCCTAGCAGAAAATGA+AGG | 0.551065 | 6_1:+102525795 | Msa0902750:three_prime_UTR |
| GGAGCCAAAGGACACTTTGG+AGG | 0.553800 | 6_1:+102524580 | Msa0902750:three_prime_UTR |
| CTTCTTGCTGATGAGTCACT+AGG | 0.554172 | 6_1:+102523392 | Msa0902750:CDS |
| CGCAAGATGGGATATGGTGA+AGG | 0.562040 | 6_1:+102523584 | Msa0902750:CDS |
| TCCTGAAGATTGTTAACCAA+AGG | 0.562951 | 6_1:-102523902 | None:intergenic |
| CACCTCCAAAGGACGGACAT+TGG | 0.563163 | 6_1:-102523543 | None:intergenic |
| CTGGAGGGACTATTACGCTC+AGG | 0.564042 | 6_1:+102522682 | Msa0902750:CDS |
| AAGCCCTAGCAGAAAATGAA+GGG | 0.566776 | 6_1:+102525796 | Msa0902750:three_prime_UTR |
| TGATCCTGAAATCAGCAAGC+TGG | 0.568498 | 6_1:+102524351 | Msa0902750:three_prime_UTR |
| CCTTATAGATCACACCTGCA+AGG | 0.569923 | 6_1:+102524513 | Msa0902750:intron |
| CCAAAGCATTATCTAACCCT+AGG | 0.570396 | 6_1:-102522634 | None:intergenic |
| TAGATCACACCTGCAAGGGA+TGG | 0.570520 | 6_1:+102524518 | Msa0902750:intron |
| ACAGCGAGGCTTTGTTCCTG+TGG | 0.575974 | 6_1:+102525142 | Msa0902750:three_prime_UTR |
| AAATTTGCAGCCTCAAGCAA+GGG | 0.577769 | 6_1:+102525710 | Msa0902750:intron |
| GGTGGATGCTGTAGTCTACC+TGG | 0.579563 | 6_1:+102523316 | Msa0902750:intron |
| TTCAGAATCCTGTAAAAGAA+GGG | 0.579921 | 6_1:+102526617 | Msa0902750:three_prime_UTR |
| CCTTGTCAAATGCATCAACC+AGG | 0.583815 | 6_1:-102523334 | None:intergenic |
| TTGTTTCCTAAGATAAGGAA+AGG | 0.590342 | 6_1:-102523422 | None:intergenic |
| CCTGGTTGATGCATTTGACA+AGG | 0.590610 | 6_1:+102523334 | Msa0902750:CDS |
| ATTGTTCCTACAGGTTGATG+TGG | 0.591363 | 6_1:+102525115 | Msa0902750:intron |
| GACTAACTTCACTACAGGCA+AGG | 0.595366 | 6_1:+102523499 | Msa0902750:CDS |
| CTACACATGAACACCTCCAA+AGG | 0.598493 | 6_1:-102523554 | None:intergenic |
| TGAAATTCCTTGTGCACTGG+CGG | 0.599562 | 6_1:-102525335 | None:intergenic |
| CTGCACTAATAGCAACTGGA+AGG | 0.599943 | 6_1:+102524987 | Msa0902750:three_prime_UTR |
| TGAGCTATTTAAATCAGCAA+AGG | 0.601651 | 6_1:+102526330 | Msa0902750:three_prime_UTR |
| ATTCACACAAGGTCTAGGAC+TGG | 0.605373 | 6_1:+102525015 | Msa0902750:three_prime_UTR |
| CACTCATCCTGAAATCAGCA+TGG | 0.606287 | 6_1:+102525497 | Msa0902750:three_prime_UTR |
| TGAAGGGGAGGGACTTGCCA+AGG | 0.616216 | 6_1:+102525812 | Msa0902750:three_prime_UTR |
| GGGTTAGATAATGCTTTGGG+TGG | 0.625164 | 6_1:+102522638 | Msa0902750:CDS |
| CTAGCAGAAAATGAAGGGGA+GGG | 0.625930 | 6_1:+102525801 | Msa0902750:three_prime_UTR |
| CCTAGCAGAAAATGAAGGGG+AGG | 0.629551 | 6_1:+102525800 | Msa0902750:three_prime_UTR |
| GATATGGTGAAGGCTTTCAG+TGG | 0.632785 | 6_1:+102523594 | Msa0902750:CDS |
| GATGAGTGAAACATGCAGCT+GGG | 0.634252 | 6_1:-102525482 | None:intergenic |
| AACTAAACCAGTGATAAACT+AGG | 0.636630 | 6_1:-102526823 | None:intergenic |
| ACATGAACACCTCCAAAGGA+CGG | 0.637700 | 6_1:-102523550 | None:intergenic |
| AAATAGCTCATCAAGAACCT+CGG | 0.637846 | 6_1:-102526317 | None:intergenic |
| AATTGCTCGTAGAGTCTGGA+GGG | 0.640603 | 6_1:+102522667 | Msa0902750:CDS |
| TTGAACCATCTTGACAGAGA+GGG | 0.642089 | 6_1:-102524045 | None:intergenic |
| TGCACATCCAACTCTGTCCG+AGG | 0.642721 | 6_1:+102526300 | Msa0902750:three_prime_UTR |
| GGTATCCATTATCAGATCAG+TGG | 0.664592 | 6_1:-102526659 | None:intergenic |
| GGAAGGGCTCCATTCACACA+AGG | 0.674546 | 6_1:+102525004 | Msa0902750:three_prime_UTR |
| TCTCCAATACAGTATAGATG+AGG | 0.676335 | 6_1:-102525283 | None:intergenic |
| TGCACTAATAGCAACTGGAA+GGG | 0.676635 | 6_1:+102524988 | Msa0902750:three_prime_UTR |
| AAATGTTACGGATCTTCAGG+CGG | 0.678024 | 6_1:+102526580 | Msa0902750:three_prime_UTR |
| CAGCATGGTTAGATTGACAG+AGG | 0.684531 | 6_1:+102525512 | Msa0902750:three_prime_UTR |
| AGCCCTAGCAGAAAATGAAG+GGG | 0.689185 | 6_1:+102525797 | Msa0902750:three_prime_UTR |
| CTTGAACCATCTTGACAGAG+AGG | 0.698516 | 6_1:-102524046 | None:intergenic |
| AAATTGCTCGTAGAGTCTGG+AGG | 0.706522 | 6_1:+102522666 | Msa0902750:CDS |
| GTATGATAATCAATATTACG+GGG | 0.732955 | 6_1:-102524394 | None:intergenic |
| GTTGATGTGGCAACACAGCG+AGG | 0.748553 | 6_1:+102525128 | Msa0902750:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTACTTGTATATATTTTTT+TGG | + | chr6_1:102524922-102524941 | Msa0902750:intron | 10.0% |
| !!! | CAAAAATTTATATTTTGTTT+GGG | - | chr6_1:102526531-102526550 | None:intergenic | 10.0% |
| !!! | TCAAAAATTTATATTTTGTT+TGG | - | chr6_1:102526532-102526551 | None:intergenic | 10.0% |
| !!! | ATAAAATGTTTCTTTTTGAT+TGG | + | chr6_1:102522555-102522574 | Msa0902750:exon | 15.0% |
| !!! | TAATTTCTTTCTTTTATGAA+TGG | + | chr6_1:102522705-102522724 | Msa0902750:intron | 15.0% |
| !! | TAATTTAGTCATAAAATTGT+TGG | + | chr6_1:102522762-102522781 | Msa0902750:intron | 15.0% |
| !!! | TCATTTTCTAAAACTATTAT+TGG | - | chr6_1:102523077-102523096 | None:intergenic | 15.0% |
| !!! | TGTTAATTGTAGATTTTATA+TGG | + | chr6_1:102523289-102523308 | Msa0902750:intron | 15.0% |
| !! | ATTGGATAATAATAGTTAAA+TGG | + | chr6_1:102523733-102523752 | Msa0902750:three_prime_UTR | 15.0% |
| !!! | ATTTTGCTAATATTTCATTT+CGG | + | chr6_1:102524155-102524174 | Msa0902750:three_prime_UTR | 15.0% |
| !!! | ATTTCCTTATTCTAAAATTT+AGG | + | chr6_1:102524245-102524264 | Msa0902750:three_prime_UTR | 15.0% |
| !!! | TTGTTTTTTTTAACTTAGTT+TGG | + | chr6_1:102526760-102526779 | Msa0902750:three_prime_UTR | 15.0% |
| !!! | TAAATTTTGGAAAAATGTTA+TGG | - | chr6_1:102526869-102526888 | None:intergenic | 15.0% |
| !!! | AAAGAAACATTTTATTCAAC+CGG | - | chr6_1:102522550-102522569 | None:intergenic | 20.0% |
| !!! | TTTCTTTTTGATTGGTTTTA+TGG | + | chr6_1:102522563-102522582 | Msa0902750:CDS | 20.0% |
| !! | CTTTCTCAGTATATTAAATA+GGG | + | chr6_1:102523617-102523636 | Msa0902750:CDS | 20.0% |
| !! | AATTGCAGAATTAATAATAG+TGG | + | chr6_1:102523838-102523857 | Msa0902750:three_prime_UTR | 20.0% |
| !! | AGAATAAGGAAATGATATAA+AGG | - | chr6_1:102524238-102524257 | None:intergenic | 20.0% |
| !! | ATTGTAAGTTAAGTAGTTAT+TGG | + | chr6_1:102524277-102524296 | Msa0902750:three_prime_UTR | 20.0% |
| !! | AGTATGATAATCAATATTAC+GGG | - | chr6_1:102524398-102524417 | None:intergenic | 20.0% |
| !! | CAGTATGATAATCAATATTA+CGG | - | chr6_1:102524399-102524418 | None:intergenic | 20.0% |
| !! | GAAACTATACATAGAAAAAA+GGG | - | chr6_1:102524863-102524882 | None:intergenic | 20.0% |
| !! | TGAAACTATACATAGAAAAA+AGG | - | chr6_1:102524864-102524883 | None:intergenic | 20.0% |
| !! | AATATATACAAGTAAACAAG+AGG | - | chr6_1:102524918-102524937 | None:intergenic | 20.0% |
| !!! | TGAAAAAATTTGCTTGTATT+AGG | + | chr6_1:102526549-102526568 | Msa0902750:three_prime_UTR | 20.0% |
| !!! | GAAAAAATTTGCTTGTATTA+GGG | + | chr6_1:102526550-102526569 | Msa0902750:three_prime_UTR | 20.0% |
| !!! | TACTCTATCATTGTAAATTT+TGG | - | chr6_1:102526882-102526901 | None:intergenic | 20.0% |
| !!! | GTTTTTGTTTCTGAAATTTC+CGG | + | chr6_1:102522528-102522547 | Msa0902750:five_prime_UTR | 25.0% |
| !! | AAGCCAAAATTTTATTCCTA+GGG | + | chr6_1:102522618-102522637 | Msa0902750:CDS | 25.0% |
| !! | TAACCCTAGGAATAAAATTT+TGG | - | chr6_1:102522624-102522643 | None:intergenic | 25.0% |
| ! | TCTCAACCACATTTAAATTT+AGG | + | chr6_1:102522823-102522842 | Msa0902750:intron | 25.0% |
| ! | CTCAACCACATTTAAATTTA+GGG | + | chr6_1:102522824-102522843 | Msa0902750:intron | 25.0% |
| ! | TCAACCACATTTAAATTTAG+GGG | + | chr6_1:102522825-102522844 | Msa0902750:intron | 25.0% |
| ! | TTTAAATTTAGGGGTTCATA+AGG | + | chr6_1:102522834-102522853 | Msa0902750:intron | 25.0% |
| ! | ATACAATATGTTACTGTTTG+AGG | - | chr6_1:102522964-102522983 | None:intergenic | 25.0% |
| !! | TTGTAGATTTTATATGGTAC+AGG | + | chr6_1:102523295-102523314 | Msa0902750:intron | 25.0% |
| !! | TGATGAATTACGTTTTCATT+TGG | + | chr6_1:102523472-102523491 | Msa0902750:CDS | 25.0% |
| !! | GATGAATTACGTTTTCATTT+GGG | + | chr6_1:102523473-102523492 | Msa0902750:CDS | 25.0% |
| !! | GGAGTCATAAAGATTAATTT+TGG | - | chr6_1:102523525-102523544 | None:intergenic | 25.0% |
| ! | GCTTTCTCAGTATATTAAAT+AGG | + | chr6_1:102523616-102523635 | Msa0902750:CDS | 25.0% |
| ! | TATACTTTGCTCATGTAAAT+TGG | + | chr6_1:102523715-102523734 | Msa0902750:three_prime_UTR | 25.0% |
| !!! | ACGACCTAAATTTTAGAATA+AGG | - | chr6_1:102524252-102524271 | None:intergenic | 25.0% |
| ! | GTATGATAATCAATATTACG+GGG | - | chr6_1:102524397-102524416 | None:intergenic | 25.0% |
| !! | CGTAATATTGATTATCATAC+TGG | + | chr6_1:102524397-102524416 | Msa0902750:three_prime_UTR | 25.0% |
| ! | ACTTATTGATGCAAAAACTA+AGG | + | chr6_1:102524559-102524578 | Msa0902750:three_prime_UTR | 25.0% |
| ! | AATTGTTATGATTTCTTCGA+TGG | + | chr6_1:102524650-102524669 | Msa0902750:intron | 25.0% |
| ! | ATTGTTATGATTTCTTCGAT+GGG | + | chr6_1:102524651-102524670 | Msa0902750:intron | 25.0% |
| ! | AATATACATTCATTTCCATC+AGG | - | chr6_1:102525088-102525107 | None:intergenic | 25.0% |
| ! | CTATATCAGTAACAATAAGT+CGG | - | chr6_1:102525242-102525261 | None:intergenic | 25.0% |
| ! | ACTGAAGCAAAAAAAGAAAA+GGG | - | chr6_1:102525387-102525406 | None:intergenic | 25.0% |
| ! | TACTGAAGCAAAAAAAGAAA+AGG | - | chr6_1:102525388-102525407 | None:intergenic | 25.0% |
| ! | GATTAAAAAGTTACCAACAA+TGG | + | chr6_1:102525413-102525432 | Msa0902750:intron | 25.0% |
| ! | TGAATAACATAGTTTCAAAG+AGG | - | chr6_1:102525628-102525647 | None:intergenic | 25.0% |
| ! | AAGATATAAGAAGATAACCT+TGG | - | chr6_1:102525832-102525851 | None:intergenic | 25.0% |
| ! | CTGTACTAAAAGAATTACTT+TGG | + | chr6_1:102525908-102525927 | Msa0902750:intron | 25.0% |
| ! | TACTAAAAGAATTACTTTGG+TGG | + | chr6_1:102525911-102525930 | Msa0902750:intron | 25.0% |
| !!! | ATTCTAGGAGTTCATATTTT+TGG | + | chr6_1:102526081-102526100 | Msa0902750:three_prime_UTR | 25.0% |
| !! | AAGATGTTGAAAGTACATTA+AGG | - | chr6_1:102526369-102526388 | None:intergenic | 25.0% |
| ! | CTTATTGAGTATAACTATTC+TGG | + | chr6_1:102526386-102526405 | Msa0902750:intron | 25.0% |
| ! | TTCTTTAACCTACATTAAGA+GGG | - | chr6_1:102526465-102526484 | None:intergenic | 25.0% |
| ! | GAAGCCAAAATTTTATTCCT+AGG | + | chr6_1:102522617-102522636 | Msa0902750:CDS | 30.0% |
| TGAACCCCTAAATTTAAATG+TGG | - | chr6_1:102522832-102522851 | None:intergenic | 30.0% | |
| !!! | GTTTTGAAAGTACTTATGCT+TGG | + | chr6_1:102522986-102523005 | Msa0902750:intron | 30.0% |
| TTAAATGTAACCACATGTGT+TGG | + | chr6_1:102523103-102523122 | Msa0902750:intron | 30.0% | |
| CAATGCATATGATTACGTTA+AGG | - | chr6_1:102523219-102523238 | None:intergenic | 30.0% | |
| ! | TAGATTTTATATGGTACAGG+TGG | + | chr6_1:102523298-102523317 | Msa0902750:intron | 30.0% |
| AATGTACCTTTCCTTATCTT+AGG | + | chr6_1:102523416-102523435 | Msa0902750:CDS | 30.0% | |
| TTGTTTCCTAAGATAAGGAA+AGG | - | chr6_1:102523425-102523444 | None:intergenic | 30.0% | |
| ! | CAATCTTGTTTCCTAAGATA+AGG | - | chr6_1:102523430-102523449 | None:intergenic | 30.0% |
| TACAAATGCTTTGTGTTTGT+TGG | + | chr6_1:102523870-102523889 | Msa0902750:three_prime_UTR | 30.0% | |
| ACAAATGCTTTGTGTTTGTT+GGG | + | chr6_1:102523871-102523890 | Msa0902750:three_prime_UTR | 30.0% | |
| ! | CGTTCAGAAGTCAAATATTT+TGG | + | chr6_1:102523942-102523961 | Msa0902750:three_prime_UTR | 30.0% |
| !!! | AAATATTTTGGTTGCAGTGA+TGG | + | chr6_1:102523954-102523973 | Msa0902750:three_prime_UTR | 30.0% |
| !!! | GCAGTGATGGTTTTTTTAAT+AGG | + | chr6_1:102523967-102523986 | Msa0902750:three_prime_UTR | 30.0% |
| !!! | GTGATGGTTTTTTTAATAGG+AGG | + | chr6_1:102523970-102523989 | Msa0902750:three_prime_UTR | 30.0% |
| TTGCTAATATTTCATTTCGG+AGG | + | chr6_1:102524158-102524177 | Msa0902750:three_prime_UTR | 30.0% | |
| TGCTAATATTTCATTTCGGA+GGG | + | chr6_1:102524159-102524178 | Msa0902750:three_prime_UTR | 30.0% | |
| AGTAGTTATTGGTATTATGC+AGG | + | chr6_1:102524288-102524307 | Msa0902750:three_prime_UTR | 30.0% | |
| ! | CTTGATCAGTTTTTGTTGAT+CGG | + | chr6_1:102524459-102524478 | Msa0902750:intron | 30.0% |
| TGATCTATAAGGAAAACATG+AGG | - | chr6_1:102524505-102524524 | None:intergenic | 30.0% | |
| GAATCAATAACCAAAAGCTT+CGG | - | chr6_1:102524715-102524734 | None:intergenic | 30.0% | |
| TGTTGTCTTTACTTTGTTAC+AGG | + | chr6_1:102524958-102524977 | Msa0902750:intron | 30.0% | |
| !! | TTTCTAGCTGAAATGTGTTT+AGG | + | chr6_1:102525050-102525069 | Msa0902750:intron | 30.0% |
| ! | TTTTTGCATATTGTTCCTAC+AGG | + | chr6_1:102525106-102525125 | Msa0902750:intron | 30.0% |
| CGACTTATTGTTACTGATAT+AGG | + | chr6_1:102525240-102525259 | Msa0902750:intron | 30.0% | |
| CTTATTGTTACTGATATAGG+AGG | + | chr6_1:102525243-102525262 | Msa0902750:intron | 30.0% | |
| CTGAAGCAAAAAAAGAAAAG+GGG | - | chr6_1:102525386-102525405 | None:intergenic | 30.0% | |
| CTAATGCATGCAGATAAAAA+TGG | - | chr6_1:102525979-102525998 | None:intergenic | 30.0% | |
| TTGATATACAGACCTGATAA+TGG | + | chr6_1:102526054-102526073 | Msa0902750:three_prime_UTR | 30.0% | |
| CTATTAATAGTCTAAATCCC+AGG | - | chr6_1:102526193-102526212 | None:intergenic | 30.0% | |
| TGAGCTATTTAAATCAGCAA+AGG | + | chr6_1:102526330-102526349 | Msa0902750:three_prime_UTR | 30.0% | |
| ! | AATTAATGCAGGTGTTACAA+AGG | - | chr6_1:102526438-102526457 | None:intergenic | 30.0% |
| GTTCTTTAACCTACATTAAG+AGG | - | chr6_1:102526466-102526485 | None:intergenic | 30.0% | |
| ATTCAGAATCCTGTAAAAGA+AGG | + | chr6_1:102526616-102526635 | Msa0902750:three_prime_UTR | 30.0% | |
| TTCAGAATCCTGTAAAAGAA+GGG | + | chr6_1:102526617-102526636 | Msa0902750:three_prime_UTR | 30.0% | |
| TCAATACAAGTAACATTCGT+CGG | - | chr6_1:102526684-102526703 | None:intergenic | 30.0% | |
| AACTAAACCAGTGATAAACT+AGG | - | chr6_1:102526826-102526845 | None:intergenic | 30.0% | |
| TGAAGACAAAAACTTGGTAG+TGG | + | chr6_1:102522475-102522494 | Msa0902750:five_prime_UTR | 35.0% | |
| CTAGGGTTAGATAATGCTTT+GGG | + | chr6_1:102522635-102522654 | Msa0902750:CDS | 35.0% | |
| GGCTATATTCAGTGTTCTAT+AGG | + | chr6_1:102523007-102523026 | Msa0902750:intron | 35.0% | |
| !! | CACATGTGTTGGTATTTTGT+CGG | + | chr6_1:102523114-102523133 | Msa0902750:intron | 35.0% |
| TGTAGTATTGTTCGCAAGAT+GGG | + | chr6_1:102523572-102523591 | Msa0902750:CDS | 35.0% | |
| !! | TAGTTCTGAAACATGCATGT+AGG | + | chr6_1:102523776-102523795 | Msa0902750:three_prime_UTR | 35.0% |
| TCCTTTGGTTAACAATCTTC+AGG | + | chr6_1:102523901-102523920 | Msa0902750:three_prime_UTR | 35.0% | |
| TCCTGAAGATTGTTAACCAA+AGG | - | chr6_1:102523905-102523924 | None:intergenic | 35.0% | |
| TGCAGTAATGTTAAGACACT+TGG | + | chr6_1:102523994-102524013 | Msa0902750:three_prime_UTR | 35.0% | |
| ! | TACTGGAATTTTTGCATCCA+AGG | + | chr6_1:102524414-102524433 | Msa0902750:three_prime_UTR | 35.0% |
| GCAAGATTTAGTAGTTACCT+TGG | - | chr6_1:102524434-102524453 | None:intergenic | 35.0% | |
| TCAATAAGTTCGATCAAGAC+AGG | - | chr6_1:102524548-102524567 | None:intergenic | 35.0% | |
| ! | AACTTAACTACCGAAGCTTT+TGG | + | chr6_1:102524702-102524721 | Msa0902750:intron | 35.0% |
| ! | AGCTGAAATGTGTTTAGGAT+AGG | + | chr6_1:102525055-102525074 | Msa0902750:intron | 35.0% |
| ! | AGGATAGGAAATTTTCCTGA+TGG | + | chr6_1:102525070-102525089 | Msa0902750:intron | 35.0% |
| ATGCGTGTAATTGATGCAAA+TGG | + | chr6_1:102525173-102525192 | Msa0902750:three_prime_UTR | 35.0% | |
| AATTGATGCAAATGGAAAGC+TGG | + | chr6_1:102525181-102525200 | Msa0902750:three_prime_UTR | 35.0% | |
| ATAGGAGGATGTTGAATGAT+AGG | + | chr6_1:102525258-102525277 | Msa0902750:intron | 35.0% | |
| GTACCTCATCTATACTGTAT+TGG | + | chr6_1:102525280-102525299 | Msa0902750:three_prime_UTR | 35.0% | |
| TCTCCAATACAGTATAGATG+AGG | - | chr6_1:102525286-102525305 | None:intergenic | 35.0% | |
| !! | AATCTAACCATGCTGATTTC+AGG | - | chr6_1:102525507-102525526 | None:intergenic | 35.0% |
| TTCTCTTTCATATGTGTGGT+CGG | + | chr6_1:102525577-102525596 | Msa0902750:intron | 35.0% | |
| CACATAACAACTTCAACTGA+AGG | - | chr6_1:102525675-102525694 | None:intergenic | 35.0% | |
| !!! | GAGGCTGCAAATTTTAAGTT+CGG | - | chr6_1:102525704-102525723 | None:intergenic | 35.0% |
| CTGTCAATGCTATTCTGATA+CGG | + | chr6_1:102525853-102525872 | Msa0902750:intron | 35.0% | |
| ! | CTGTCATGACAGAAGAATTT+TGG | - | chr6_1:102525939-102525958 | None:intergenic | 35.0% |
| GCATGCAGATAAAAATGGAT+AGG | - | chr6_1:102525974-102525993 | None:intergenic | 35.0% | |
| CTATAGCATTAGATGCTTCA+TGG | - | chr6_1:102526128-102526147 | None:intergenic | 35.0% | |
| GCATCTAATGCTATAGCATT+AGG | + | chr6_1:102526132-102526151 | Msa0902750:three_prime_UTR | 35.0% | |
| ! | CTGCTAAGTTTACCATTTTG+TGG | + | chr6_1:102526247-102526266 | Msa0902750:intron | 35.0% |
| AAATAGCTCATCAAGAACCT+CGG | - | chr6_1:102526320-102526339 | None:intergenic | 35.0% | |
| AGCTCTATGGGTGTAAAATT+AGG | - | chr6_1:102526412-102526431 | None:intergenic | 35.0% | |
| ! | TAATTTTACACCCATAGAGC+TGG | + | chr6_1:102526411-102526430 | Msa0902750:intron | 35.0% |
| TAGGGACTTCCAAAATGTTA+CGG | + | chr6_1:102526568-102526587 | Msa0902750:three_prime_UTR | 35.0% | |
| CAATACAAGTAACATTCGTC+GGG | - | chr6_1:102526683-102526702 | None:intergenic | 35.0% | |
| ! | ATAAACTAGGCCACTTTCAA+AGG | - | chr6_1:102526813-102526832 | None:intergenic | 35.0% |
| ! | TTCTTTTTGCCACAGACCAA+GGG | - | chr6_1:102522600-102522619 | None:intergenic | 40.0% |
| ! | CCAAAGCATTATCTAACCCT+AGG | - | chr6_1:102522637-102522656 | None:intergenic | 40.0% |
| CCTAGGGTTAGATAATGCTT+TGG | + | chr6_1:102522634-102522653 | Msa0902750:CDS | 40.0% | |
| CTCGTGAATCAAATGAATCC+CGG | + | chr6_1:102522904-102522923 | Msa0902750:intron | 40.0% | |
| GAATCAAATGAATCCCGGTT+AGG | + | chr6_1:102522909-102522928 | Msa0902750:intron | 40.0% | |
| ATATGCGTTACTCTCCTAAC+CGG | - | chr6_1:102522926-102522945 | None:intergenic | 40.0% | |
| CGACAAAATACCAACACATG+TGG | - | chr6_1:102523116-102523135 | None:intergenic | 40.0% | |
| ! | TTGGTATTTTGTCGGTGTGT+TGG | + | chr6_1:102523122-102523141 | Msa0902750:intron | 40.0% |
| AGCGTGAATGTAATCATGTG+TGG | + | chr6_1:102523249-102523268 | Msa0902750:intron | 40.0% | |
| GCGTGAATGTAATCATGTGT+GGG | + | chr6_1:102523250-102523269 | Msa0902750:intron | 40.0% | |
| TCCAGAATCAAAGAAAGAGC+TGG | + | chr6_1:102523364-102523383 | Msa0902750:CDS | 40.0% | |
| TCCAGCTCTTTCTTTGATTC+TGG | - | chr6_1:102523368-102523387 | None:intergenic | 40.0% | |
| TCATCATCTGATGCAGCATA+AGG | - | chr6_1:102523458-102523477 | None:intergenic | 40.0% | |
| GTGTAGTATTGTTCGCAAGA+TGG | + | chr6_1:102523571-102523590 | Msa0902750:CDS | 40.0% | |
| ATTGTTCGCAAGATGGGATA+TGG | + | chr6_1:102523578-102523597 | Msa0902750:CDS | 40.0% | |
| TTGAACCATCTTGACAGAGA+GGG | - | chr6_1:102524048-102524067 | None:intergenic | 40.0% | |
| ! | TGGTTCAAGTTCAACACGTT+TGG | + | chr6_1:102524060-102524079 | Msa0902750:three_prime_UTR | 40.0% |
| AACACGTTTGGCAGACAATT+AGG | + | chr6_1:102524072-102524091 | Msa0902750:three_prime_UTR | 40.0% | |
| CTGATTTCAGGATCAAATCC+AGG | - | chr6_1:102524346-102524365 | None:intergenic | 40.0% | |
| TAAGGAAAACATGAGGACAG+TGG | - | chr6_1:102524498-102524517 | None:intergenic | 40.0% | |
| CTTATAGATCACACCTGCAA+GGG | + | chr6_1:102524514-102524533 | Msa0902750:intron | 40.0% | |
| TGCAAAAACTAAGGAGCCAA+AGG | + | chr6_1:102524568-102524587 | Msa0902750:three_prime_UTR | 40.0% | |
| AAGTCTTAGATTGTCTGCCT+CGG | - | chr6_1:102524808-102524827 | None:intergenic | 40.0% | |
| TGCACTAATAGCAACTGGAA+GGG | + | chr6_1:102524988-102525007 | Msa0902750:three_prime_UTR | 40.0% | |
| !! | ATTGTTCCTACAGGTTGATG+TGG | + | chr6_1:102525115-102525134 | Msa0902750:intron | 40.0% |
| TACTGTATTGGAGACGCAAA+TGG | + | chr6_1:102525292-102525311 | Msa0902750:three_prime_UTR | 40.0% | |
| !! | GTGACTTGTTCAACCATTGT+TGG | - | chr6_1:102525429-102525448 | None:intergenic | 40.0% |
| ACAATGGTTGAACAAGTCAC+TGG | + | chr6_1:102525429-102525448 | Msa0902750:intron | 40.0% | |
| CCACACATATGAAAGAGAAC+TGG | - | chr6_1:102525576-102525595 | None:intergenic | 40.0% | |
| CCAGTTCTCTTTCATATGTG+TGG | + | chr6_1:102525573-102525592 | Msa0902750:intron | 40.0% | |
| AAAATTTGCAGCCTCAAGCA+AGG | + | chr6_1:102525709-102525728 | Msa0902750:intron | 40.0% | |
| AAATTTGCAGCCTCAAGCAA+GGG | + | chr6_1:102525710-102525729 | Msa0902750:intron | 40.0% | |
| AAAGCCCTAGCAGAAAATGA+AGG | + | chr6_1:102525795-102525814 | Msa0902750:three_prime_UTR | 40.0% | |
| AAGCCCTAGCAGAAAATGAA+GGG | + | chr6_1:102525796-102525815 | Msa0902750:three_prime_UTR | 40.0% | |
| !! | CGTATCAGAATAGCATTGAC+AGG | - | chr6_1:102525855-102525874 | None:intergenic | 40.0% |
| CCTAGAATCTCTCCATTATC+AGG | - | chr6_1:102526069-102526088 | None:intergenic | 40.0% | |
| !! | CCTGATAATGGAGAGATTCT+AGG | + | chr6_1:102526066-102526085 | Msa0902750:three_prime_UTR | 40.0% |
| TAGCATTAGGACACGTATTC+AGG | + | chr6_1:102526145-102526164 | Msa0902750:three_prime_UTR | 40.0% | |
| TAAATCCCAGGTGCATAACT+GGG | - | chr6_1:102526181-102526200 | None:intergenic | 40.0% | |
| GGTAAACTTAGCAGATAGAC+AGG | - | chr6_1:102526241-102526260 | None:intergenic | 40.0% | |
| ! | ACCATTTTGTGGTACAATGC+AGG | + | chr6_1:102526258-102526277 | Msa0902750:intron | 40.0% |
| TCCTGCATTGTACCACAAAA+TGG | - | chr6_1:102526262-102526281 | None:intergenic | 40.0% | |
| TTACAAAGGACCAGCTCTAT+GGG | - | chr6_1:102526424-102526443 | None:intergenic | 40.0% | |
| ! | CTGCAACTGGTTCACTTAAT+GGG | - | chr6_1:102526499-102526518 | None:intergenic | 40.0% |
| ! | ACTGCAACTGGTTCACTTAA+TGG | - | chr6_1:102526500-102526519 | None:intergenic | 40.0% |
| ! | CCTGAAGATCCGTAACATTT+TGG | - | chr6_1:102526580-102526599 | None:intergenic | 40.0% |
| CCAAAATGTTACGGATCTTC+AGG | + | chr6_1:102526577-102526596 | Msa0902750:three_prime_UTR | 40.0% | |
| AAATGTTACGGATCTTCAGG+CGG | + | chr6_1:102526580-102526599 | Msa0902750:three_prime_UTR | 40.0% | |
| ! | AAACGGTTCCCTTCTTTTAC+AGG | - | chr6_1:102526628-102526647 | None:intergenic | 40.0% |
| AAAAGAAGGGAACCGTTTGA+AGG | + | chr6_1:102526630-102526649 | Msa0902750:three_prime_UTR | 40.0% | |
| GATTGCCACTGATCTGATAA+TGG | + | chr6_1:102526654-102526673 | Msa0902750:three_prime_UTR | 40.0% | |
| GGTATCCATTATCAGATCAG+TGG | - | chr6_1:102526662-102526681 | None:intergenic | 40.0% | |
| CCTTCTCGATAACTACAACT+AGG | - | chr6_1:102526790-102526809 | None:intergenic | 40.0% | |
| CCTAGTTGTAGTTATCGAGA+AGG | + | chr6_1:102526787-102526806 | Msa0902750:three_prime_UTR | 40.0% | |
| AAAGTGGCCTAGTTTATCAC+TGG | + | chr6_1:102526816-102526835 | Msa0902750:three_prime_UTR | 40.0% | |
| TATGGAATTCTTGCCACCCT+TGG | + | chr6_1:102522581-102522600 | Msa0902750:CDS | 45.0% | |
| ! | CTTCTTTTTGCCACAGACCA+AGG | - | chr6_1:102522601-102522620 | None:intergenic | 45.0% |
| ! | GGGTTAGATAATGCTTTGGG+TGG | + | chr6_1:102522638-102522657 | Msa0902750:CDS | 45.0% |
| ACCAAATTGCTCGTAGAGTC+TGG | + | chr6_1:102522663-102522682 | Msa0902750:CDS | 45.0% | |
| TCCAGACTCTACGAGCAATT+TGG | - | chr6_1:102522667-102522686 | None:intergenic | 45.0% | |
| AAATTGCTCGTAGAGTCTGG+AGG | + | chr6_1:102522666-102522685 | Msa0902750:CDS | 45.0% | |
| AATTGCTCGTAGAGTCTGGA+GGG | + | chr6_1:102522667-102522686 | Msa0902750:CDS | 45.0% | |
| TATGCGTTACTCTCCTAACC+GGG | - | chr6_1:102522925-102522944 | None:intergenic | 45.0% | |
| TGCGTCAGTGATTCATAGCT+CGG | - | chr6_1:102523044-102523063 | None:intergenic | 45.0% | |
| CCTTGTCAAATGCATCAACC+AGG | - | chr6_1:102523337-102523356 | None:intergenic | 45.0% | |
| ! | CCTGGTTGATGCATTTGACA+AGG | + | chr6_1:102523334-102523353 | Msa0902750:CDS | 45.0% |
| CTTCTTGCTGATGAGTCACT+AGG | + | chr6_1:102523392-102523411 | Msa0902750:CDS | 45.0% | |
| GGCTTGACTAACTTCACTAC+AGG | + | chr6_1:102523494-102523513 | Msa0902750:CDS | 45.0% | |
| GACTAACTTCACTACAGGCA+AGG | + | chr6_1:102523499-102523518 | Msa0902750:CDS | 45.0% | |
| ACATGAACACCTCCAAAGGA+CGG | - | chr6_1:102523553-102523572 | None:intergenic | 45.0% | |
| CTACACATGAACACCTCCAA+AGG | - | chr6_1:102523557-102523576 | None:intergenic | 45.0% | |
| GATATGGTGAAGGCTTTCAG+TGG | + | chr6_1:102523594-102523613 | Msa0902750:CDS | 45.0% | |
| CTTGAACCATCTTGACAGAG+AGG | - | chr6_1:102524049-102524068 | None:intergenic | 45.0% | |
| ! | GCTTTAGATCAGCTTATGCC+TGG | + | chr6_1:102524325-102524344 | Msa0902750:three_prime_UTR | 45.0% |
| TGATCCTGAAATCAGCAAGC+TGG | + | chr6_1:102524351-102524370 | Msa0902750:three_prime_UTR | 45.0% | |
| ! | AAATCAGCAAGCTGGCTCAA+AGG | + | chr6_1:102524359-102524378 | Msa0902750:three_prime_UTR | 45.0% |
| ! | AATCAGCAAGCTGGCTCAAA+GGG | + | chr6_1:102524360-102524379 | Msa0902750:three_prime_UTR | 45.0% |
| CCTTGCAGGTGTGATCTATA+AGG | - | chr6_1:102524516-102524535 | None:intergenic | 45.0% | |
| CCTTATAGATCACACCTGCA+AGG | + | chr6_1:102524513-102524532 | Msa0902750:intron | 45.0% | |
| TAAGGAGCCAAAGGACACTT+TGG | + | chr6_1:102524577-102524596 | Msa0902750:three_prime_UTR | 45.0% | |
| ! | GTTACCTCCAAAGTGTCCTT+TGG | - | chr6_1:102524587-102524606 | None:intergenic | 45.0% |
| GATGCTGCACTAATAGCAAC+TGG | + | chr6_1:102524983-102525002 | Msa0902750:three_prime_UTR | 45.0% | |
| CTGCACTAATAGCAACTGGA+AGG | + | chr6_1:102524987-102525006 | Msa0902750:three_prime_UTR | 45.0% | |
| AGTCCTAGACCTTGTGTGAA+TGG | - | chr6_1:102525016-102525035 | None:intergenic | 45.0% | |
| ! | ATTCACACAAGGTCTAGGAC+TGG | + | chr6_1:102525015-102525034 | Msa0902750:three_prime_UTR | 45.0% |
| TGAAATTCCTTGTGCACTGG+CGG | - | chr6_1:102525338-102525357 | None:intergenic | 45.0% | |
| ACCTGAAATTCCTTGTGCAC+TGG | - | chr6_1:102525341-102525360 | None:intergenic | 45.0% | |
| ! | GTGCACAAGGAATTTCAGGT+AGG | + | chr6_1:102525341-102525360 | Msa0902750:intron | 45.0% |
| ! | CACAAGGAATTTCAGGTAGG+TGG | + | chr6_1:102525344-102525363 | Msa0902750:intron | 45.0% |
| GATGAGTGAAACATGCAGCT+GGG | - | chr6_1:102525485-102525504 | None:intergenic | 45.0% | |
| CACTCATCCTGAAATCAGCA+TGG | + | chr6_1:102525497-102525516 | Msa0902750:three_prime_UTR | 45.0% | |
| CAGCATGGTTAGATTGACAG+AGG | + | chr6_1:102525512-102525531 | Msa0902750:three_prime_UTR | 45.0% | |
| AGCAAGGGAGAAAGGTGAAA+AGG | + | chr6_1:102525725-102525744 | Msa0902750:three_prime_UTR | 45.0% | |
| AAGGGAGAAAGGTGAAAAGG+AGG | + | chr6_1:102525728-102525747 | Msa0902750:three_prime_UTR | 45.0% | |
| AGGGAGAAAGGTGAAAAGGA+GGG | + | chr6_1:102525729-102525748 | Msa0902750:three_prime_UTR | 45.0% | |
| AGCCCTAGCAGAAAATGAAG+GGG | + | chr6_1:102525797-102525816 | Msa0902750:three_prime_UTR | 45.0% | |
| ! | CTCCCCTTCATTTTCTGCTA+GGG | - | chr6_1:102525802-102525821 | None:intergenic | 45.0% |
| CTAGCAGAAAATGAAGGGGA+GGG | + | chr6_1:102525801-102525820 | Msa0902750:three_prime_UTR | 45.0% | |
| TTATACCCCAGTTATGCACC+TGG | + | chr6_1:102526172-102526191 | Msa0902750:intron | 45.0% | |
| TATACCCCAGTTATGCACCT+GGG | + | chr6_1:102526173-102526192 | Msa0902750:intron | 45.0% | |
| AAATCCCAGGTGCATAACTG+GGG | - | chr6_1:102526180-102526199 | None:intergenic | 45.0% | |
| CTAAATCCCAGGTGCATAAC+TGG | - | chr6_1:102526182-102526201 | None:intergenic | 45.0% | |
| GTTACAAAGGACCAGCTCTA+TGG | - | chr6_1:102526425-102526444 | None:intergenic | 45.0% | |
| AATTCGCGCCCTCTTAATGT+AGG | + | chr6_1:102526454-102526473 | Msa0902750:intron | 45.0% | |
| TGGGAAGATTAGACTGCAAC+TGG | - | chr6_1:102526512-102526531 | None:intergenic | 45.0% | |
| CAGTGGCAATCTCCTTCAAA+CGG | - | chr6_1:102526645-102526664 | None:intergenic | 45.0% | |
| ! | ATCGAGAAGGCCTTTGAAAG+TGG | + | chr6_1:102526800-102526819 | Msa0902750:three_prime_UTR | 45.0% |
| ! | TTTTTGCCACAGACCAAGGG+TGG | - | chr6_1:102522597-102522616 | None:intergenic | 50.0% |
| TGACTCCAATGTCCGTCCTT+TGG | + | chr6_1:102523538-102523557 | Msa0902750:CDS | 50.0% | |
| CGCAAGATGGGATATGGTGA+AGG | + | chr6_1:102523584-102523603 | Msa0902750:CDS | 50.0% | |
| TTGTTGGGCAGTGCTTCCTT+TGG | + | chr6_1:102523886-102523905 | Msa0902750:three_prime_UTR | 50.0% | |
| GTTGTCCCTCTCTGTCAAGA+TGG | + | chr6_1:102524040-102524059 | Msa0902750:three_prime_UTR | 50.0% | |
| !! | TGAGCCAGCTTGCTGATTTC+AGG | - | chr6_1:102524358-102524377 | None:intergenic | 50.0% |
| TAGATCACACCTGCAAGGGA+TGG | + | chr6_1:102524518-102524537 | Msa0902750:intron | 50.0% | |
| ! | ACAGGTTTTCCATCCCTTGC+AGG | - | chr6_1:102524530-102524549 | None:intergenic | 50.0% |
| CGCATAAGCGCTTGATGTAC+TGG | + | chr6_1:102524748-102524767 | Msa0902750:intron | 50.0% | |
| GCTCCATTCACACAAGGTCT+AGG | + | chr6_1:102525010-102525029 | Msa0902750:three_prime_UTR | 50.0% | |
| GTGTTGCCACATCAACCTGT+AGG | - | chr6_1:102525124-102525143 | None:intergenic | 50.0% | |
| GCCAGTGCACAAGGAATTTC+AGG | + | chr6_1:102525337-102525356 | Msa0902750:three_prime_UTR | 50.0% | |
| GGATGAGTGAAACATGCAGC+TGG | - | chr6_1:102525486-102525505 | None:intergenic | 50.0% | |
| TCACCTTTCTCCCTTGCTTG+AGG | - | chr6_1:102525723-102525742 | None:intergenic | 50.0% | |
| ! | CCTCCCCTTCATTTTCTGCT+AGG | - | chr6_1:102525803-102525822 | None:intergenic | 50.0% |
| CCTAGCAGAAAATGAAGGGG+AGG | + | chr6_1:102525800-102525819 | Msa0902750:three_prime_UTR | 50.0% | |
| TCAAGAACCTCGGACAGAGT+TGG | - | chr6_1:102526310-102526329 | None:intergenic | 50.0% | |
| ! | AAGAGGGCGCGAATTAATGC+AGG | - | chr6_1:102526449-102526468 | None:intergenic | 50.0% |
| TTCTTGCCACCCTTGGTCTG+TGG | + | chr6_1:102522588-102522607 | Msa0902750:CDS | 55.0% | |
| CTGGAGGGACTATTACGCTC+AGG | + | chr6_1:102522682-102522701 | Msa0902750:CDS | 55.0% | |
| GGTGGATGCTGTAGTCTACC+TGG | + | chr6_1:102523316-102523335 | Msa0902750:intron | 55.0% | |
| CTCCAATGTCCGTCCTTTGG+AGG | + | chr6_1:102523541-102523560 | Msa0902750:CDS | 55.0% | |
| CACCTCCAAAGGACGGACAT+TGG | - | chr6_1:102523546-102523565 | None:intergenic | 55.0% | |
| GGAGCCAAAGGACACTTTGG+AGG | + | chr6_1:102524580-102524599 | Msa0902750:three_prime_UTR | 55.0% | |
| GAGTTCATGAAGCTGCACCG+AGG | + | chr6_1:102524788-102524807 | Msa0902750:intron | 55.0% | |
| GGAAGGGCTCCATTCACACA+AGG | + | chr6_1:102525004-102525023 | Msa0902750:three_prime_UTR | 55.0% | |
| GTTGATGTGGCAACACAGCG+AGG | + | chr6_1:102525128-102525147 | Msa0902750:three_prime_UTR | 55.0% | |
| !! | ACAGCGAGGCTTTGTTCCTG+TGG | + | chr6_1:102525142-102525161 | Msa0902750:three_prime_UTR | 55.0% |
| CAGCCTCAAGCAAGGGAGAA+AGG | + | chr6_1:102525717-102525736 | Msa0902750:intron | 55.0% | |
| TGCACATCCAACTCTGTCCG+AGG | + | chr6_1:102526300-102526319 | Msa0902750:three_prime_UTR | 55.0% | |
| TGAAGGGGAGGGACTTGCCA+AGG | + | chr6_1:102525812-102525831 | Msa0902750:three_prime_UTR | 60.0% | |
| ACACGCATGCGCTCGTCCAC+AGG | - | chr6_1:102525161-102525180 | None:intergenic | 65.0% | |
| GCTCATGCCGCCAGTGCACA+AGG | + | chr6_1:102525328-102525347 | Msa0902750:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 102522474 | 102526909 | 102522474 | ID=Msa0902750;Name=Msa0902750 |
| chr6_1 | mRNA | 102522474 | 102526909 | 102522474 | ID=Msa0902750-mRNA-1;Parent=Msa0902750;Name=Msa0902750-mRNA-1;_AED=0.04;_eAED=0.04;_QI=86|1|1|1|0.7|0.63|11|1918|154 |
| chr6_1 | exon | 102522474 | 102522703 | 102522474 | ID=Msa0902750-mRNA-1:exon:17984;Parent=Msa0902750-mRNA-1 |
| chr6_1 | exon | 102523317 | 102524435 | 102523317 | ID=Msa0902750-mRNA-1:exon:17985;Parent=Msa0902750-mRNA-1 |
| chr6_1 | exon | 102524521 | 102524601 | 102524521 | ID=Msa0902750-mRNA-1:exon:17986;Parent=Msa0902750-mRNA-1 |
| chr6_1 | exon | 102524980 | 102525042 | 102524980 | ID=Msa0902750-mRNA-1:exon:17987;Parent=Msa0902750-mRNA-1 |
| chr6_1 | exon | 102525128 | 102525202 | 102525128 | ID=Msa0902750-mRNA-1:exon:17988;Parent=Msa0902750-mRNA-1 |
| chr6_1 | exon | 102525280 | 102525358 | 102525280 | ID=Msa0902750-mRNA-1:exon:17989;Parent=Msa0902750-mRNA-1 |
| chr6_1 | exon | 102525445 | 102525533 | 102525445 | ID=Msa0902750-mRNA-1:exon:17990;Parent=Msa0902750-mRNA-1 |
| chr6_1 | exon | 102525720 | 102525833 | 102525720 | ID=Msa0902750-mRNA-1:exon:17991;Parent=Msa0902750-mRNA-1 |
| chr6_1 | exon | 102526054 | 102526166 | 102526054 | ID=Msa0902750-mRNA-1:exon:17992;Parent=Msa0902750-mRNA-1 |
| chr6_1 | exon | 102526280 | 102526351 | 102526280 | ID=Msa0902750-mRNA-1:exon:17993;Parent=Msa0902750-mRNA-1 |
| chr6_1 | exon | 102526476 | 102526909 | 102526476 | ID=Msa0902750-mRNA-1:exon:17994;Parent=Msa0902750-mRNA-1 |
| chr6_1 | five_prime_UTR | 102522474 | 102522559 | 102522474 | ID=Msa0902750-mRNA-1:five_prime_utr;Parent=Msa0902750-mRNA-1 |
| chr6_1 | CDS | 102522560 | 102522703 | 102522560 | ID=Msa0902750-mRNA-1:cds;Parent=Msa0902750-mRNA-1 |
| chr6_1 | CDS | 102523317 | 102523637 | 102523317 | ID=Msa0902750-mRNA-1:cds;Parent=Msa0902750-mRNA-1 |
| chr6_1 | three_prime_UTR | 102523638 | 102524435 | 102523638 | ID=Msa0902750-mRNA-1:three_prime_utr;Parent=Msa0902750-mRNA-1 |
| chr6_1 | three_prime_UTR | 102524521 | 102524601 | 102524521 | ID=Msa0902750-mRNA-1:three_prime_utr;Parent=Msa0902750-mRNA-1 |
| chr6_1 | three_prime_UTR | 102524980 | 102525042 | 102524980 | ID=Msa0902750-mRNA-1:three_prime_utr;Parent=Msa0902750-mRNA-1 |
| chr6_1 | three_prime_UTR | 102525128 | 102525202 | 102525128 | ID=Msa0902750-mRNA-1:three_prime_utr;Parent=Msa0902750-mRNA-1 |
| chr6_1 | three_prime_UTR | 102525280 | 102525358 | 102525280 | ID=Msa0902750-mRNA-1:three_prime_utr;Parent=Msa0902750-mRNA-1 |
| chr6_1 | three_prime_UTR | 102525445 | 102525533 | 102525445 | ID=Msa0902750-mRNA-1:three_prime_utr;Parent=Msa0902750-mRNA-1 |
| chr6_1 | three_prime_UTR | 102525720 | 102525833 | 102525720 | ID=Msa0902750-mRNA-1:three_prime_utr;Parent=Msa0902750-mRNA-1 |
| chr6_1 | three_prime_UTR | 102526054 | 102526166 | 102526054 | ID=Msa0902750-mRNA-1:three_prime_utr;Parent=Msa0902750-mRNA-1 |
| chr6_1 | three_prime_UTR | 102526280 | 102526351 | 102526280 | ID=Msa0902750-mRNA-1:three_prime_utr;Parent=Msa0902750-mRNA-1 |
| chr6_1 | three_prime_UTR | 102526476 | 102526909 | 102526476 | ID=Msa0902750-mRNA-1:three_prime_utr;Parent=Msa0902750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
