AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0779320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0779320 MtrunA17_Chr1g0190351 93.360 994 62 1 26 1015 1 994 0.0 1901
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0779320 AT2G21440.1 47.725 1033 439 21 54 1015 1 1003 0.0 810

Find 225 sgRNAs with CRISPR-Local

Find 605 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCTTCCTTTGGTTCTTT+TGG 0.103039 5_2:-60514558 None:intergenic
TCTGTTTCCTTGGAAGTTTC+AGG 0.151548 5_2:-60518829 None:intergenic
TGCTTCTGGGATGGGTATTT+TGG 0.157301 5_2:+60519133 Msa0779320:CDS
CGTTACGAAGTTTCAGTTTC+TGG 0.161347 5_2:-60520325 None:intergenic
CCTTGTTCGCTATTTGAATT+TGG 0.165477 5_2:-60520494 None:intergenic
TTAACAGTTTCCTTGGATTT+TGG 0.171316 5_2:-60518751 None:intergenic
GGGGTTCTCTTTCTGTCTTT+TGG 0.201997 5_2:-60520558 None:intergenic
ACTGAATCTTTGGTCTTCTT+TGG 0.214165 5_2:-60520812 None:intergenic
AAGAAAGAAGACGCGATATT+TGG 0.226860 5_2:+60520734 Msa0779320:CDS
TCAACTGCCAATACTGCTTC+TGG 0.228699 5_2:+60519119 Msa0779320:CDS
GGTAAAGGGTAGACCATTAA+AGG 0.229384 5_2:+60519154 Msa0779320:CDS
AACCGTGTCATGTTGGTATT+TGG 0.230412 5_2:-60521015 None:intergenic
GTCCTTCCCTACTGAATCTT+TGG 0.233499 5_2:-60520822 None:intergenic
GTTGCTAGAACTGTTATATT+TGG 0.244405 5_2:+60514974 Msa0779320:CDS
AGAGCCTTTAAAACCTTTAA+TGG 0.253378 5_2:-60519167 None:intergenic
TGTCTTTGGTTGTAGTAATC+AGG 0.255605 5_2:+60512684 Msa0779320:intron
GATAAAGACAGCGGATTATC+TGG 0.273260 5_2:+60514513 Msa0779320:CDS
AGGCCAAAGAAAATGAAATA+AGG 0.273524 5_2:+60516566 Msa0779320:intron
TTTCATCTGCGGGGCCTGTA+TGG 0.276353 5_2:+60516596 Msa0779320:CDS
TCCACAATGGGCCGATGTTC+AGG 0.289229 5_2:-60520284 None:intergenic
AAACTCAATGGATCGAAGTT+TGG 0.305477 5_2:+60516902 Msa0779320:CDS
CACTTCGGAATTTGTACTCT+TGG 0.314322 5_2:-60520579 None:intergenic
ACTTCGGAATTTGTACTCTT+GGG 0.316199 5_2:-60520578 None:intergenic
ACCTGTTAGGCGTTGTTTCA+TGG 0.330071 5_2:+60513002 Msa0779320:CDS
CAATCACAACCTTCTTCCTT+TGG 0.333819 5_2:-60514567 None:intergenic
TAACCAACCTGATGAATTAC+AGG 0.341754 5_2:-60519806 None:intergenic
TGTCAGAAACCTTCCTTTCA+AGG 0.342388 5_2:+60516461 Msa0779320:CDS
CAAATCATCTTCTGTTTCCT+TGG 0.348953 5_2:-60518839 None:intergenic
TCTCACCCTCCTCAACATTT+CGG 0.353568 5_2:-60512090 None:intergenic
GTCGTCTCATAGCTGTTGAT+TGG 0.358840 5_2:+60516927 Msa0779320:CDS
AACTCAATGGATCGAAGTTT+GGG 0.358983 5_2:+60516903 Msa0779320:CDS
ATTATTTACAGATTCGTCTT+TGG 0.361831 5_2:-60518698 None:intergenic
ATAGTTCCATTGAAAGTAAT+AGG 0.371133 5_2:+60520699 Msa0779320:CDS
TTAGAAACAAAGAGTGTTAA+GGG 0.371228 5_2:-60512842 None:intergenic
TGCACCCTTAACAGTTTCCT+TGG 0.378021 5_2:-60518758 None:intergenic
CTATTAAGCATCCCCTTTCA+AGG 0.383007 5_2:+60515065 Msa0779320:CDS
GCTGAAACCCCTTCGGCAGC+TGG 0.384100 5_2:-60519388 None:intergenic
CTGAGAGTTAGTGAAGGAAT+AGG 0.388327 5_2:-60512870 None:intergenic
AGAACCCTTGTGTGAGAACT+TGG 0.390972 5_2:-60520885 None:intergenic
AAGCAGGGGAAAATGTTTCT+AGG 0.391623 5_2:+60520783 Msa0779320:CDS
TCTACACAACATCGTGGTTT+CGG 0.391629 5_2:+60513147 Msa0779320:CDS
CTCTGAAGCAGGAGCATCAT+TGG 0.391724 5_2:-60516981 None:intergenic
AAAATCCAAGGAAACTGTTA+AGG 0.392787 5_2:+60518753 Msa0779320:CDS
AGCGTAAACTCCTGCATTGT+CGG 0.396945 5_2:-60520411 None:intergenic
ACCATGAAACAACGCCTAAC+AGG 0.397654 5_2:-60513003 None:intergenic
TTGCCCGCCGAAGGCGATCT+TGG 0.397759 5_2:-60520620 None:intergenic
AAAGGCTCTGGACAAGAAAT+CGG 0.400061 5_2:+60519181 Msa0779320:CDS
TTGTTTCATGGTCACACAAA+AGG 0.402584 5_2:+60513014 Msa0779320:CDS
CACCGCCAAGCCAGAGAAAT+CGG 0.405483 5_2:+60515031 Msa0779320:CDS
ATCTAATTCAAAGGGAAGAT+TGG 0.406524 5_2:-60518881 None:intergenic
TTTGGGCACGCCAACTTGGC+GGG 0.412960 5_2:+60515734 Msa0779320:CDS
AAGCTTCCATTTCTGAGTCT+TGG 0.414414 5_2:-60516436 None:intergenic
AGACCACCGCAATCTTTACT+TGG 0.416144 5_2:+60519244 Msa0779320:CDS
ATTAGAAACAAAGAGTGTTA+AGG 0.416484 5_2:-60512843 None:intergenic
AAACCGTTGCTTCACTTCTT+CGG 0.420518 5_2:-60518905 None:intergenic
CATCTCTTCATCATCGGCGA+TGG 0.421269 5_2:+60512766 Msa0779320:CDS
GGGAAAATGTTTCTAGGAAA+AGG 0.425659 5_2:+60520789 Msa0779320:CDS
TGTTGGTATTTGGTTCAAAC+TGG 0.429637 5_2:-60521005 None:intergenic
TGAGCTGAAGAACGGTTCAT+TGG 0.431497 5_2:+60514241 Msa0779320:CDS
GGCCAAAGAAAATGAAATAA+GGG 0.433746 5_2:+60516567 Msa0779320:intron
CAATCATAAAAGTGGTTTAG+AGG 0.434562 5_2:+60520959 Msa0779320:exon
CCTCCTCAACATTTCGGAAT+GGG 0.436382 5_2:-60512084 None:intergenic
CACCATGACTCTGCCCATCT+TGG 0.437005 5_2:-60520655 None:intergenic
TTGGTCACTTGGTGGAGAAC+AGG 0.437156 5_2:-60518958 None:intergenic
TCCTGTGTGCAGTCTTTCGA+AGG 0.439780 5_2:+60516742 Msa0779320:intron
ACACACAGTGCCGATTTCTC+TGG 0.447857 5_2:-60515041 None:intergenic
TGCCGATTTCTCTGGCTTGG+CGG 0.449281 5_2:-60515033 None:intergenic
TTCATCTGCGGGGCCTGTAT+GGG 0.450248 5_2:+60516597 Msa0779320:CDS
CAACTGCCAATACTGCTTCT+GGG 0.451408 5_2:+60519120 Msa0779320:CDS
AATCTAAACAGCTTAGGAAA+TGG 0.456031 5_2:+60520933 Msa0779320:CDS
AAAAGTGGTTTAGAGGGGTT+TGG 0.456038 5_2:+60520966 Msa0779320:exon
TGAGAGTTAGTGAAGGAATA+GGG 0.456317 5_2:-60512869 None:intergenic
GTCTTTGGTTGTAGTAATCA+GGG 0.457168 5_2:+60512685 Msa0779320:intron
TGAACCGTTCTTCAGCTCAA+TGG 0.460449 5_2:-60514237 None:intergenic
CAGAAGATCATTCCTTGAAA+GGG 0.462491 5_2:-60515077 None:intergenic
AATCATAAAAGTGGTTTAGA+GGG 0.462549 5_2:+60520960 Msa0779320:exon
GCCAATACTGCTTCTGGGAT+GGG 0.465705 5_2:+60519125 Msa0779320:CDS
GCGTAAACTCCTGCATTGTC+GGG 0.469405 5_2:-60520410 None:intergenic
TTGTCTTGTGAATTCTGCTA+TGG 0.470061 5_2:+60514997 Msa0779320:CDS
ACCCATCCCAGAAGCAGTAT+TGG 0.471074 5_2:-60519126 None:intergenic
CGTTCTTCAGCTCAATGGCT+TGG 0.475932 5_2:-60514232 None:intergenic
GAACAAACTTTCAGTGAGGT+TGG 0.476068 5_2:+60512979 Msa0779320:CDS
TAGGAGGGACTTATTCTTGA+CGG 0.477564 5_2:+60519361 Msa0779320:intron
ACTGTTTGGGCACGCCAACT+TGG 0.478059 5_2:+60515730 Msa0779320:CDS
CAGGCGATTCGAAAACTCAA+TGG 0.479592 5_2:+60516890 Msa0779320:intron
TGCAGGCGTCCACGAGGGAC+TGG 0.480915 5_2:+60519053 Msa0779320:intron
TCAGTGAGGTTGGACCTGTT+AGG 0.482762 5_2:+60512989 Msa0779320:CDS
AGAGTTCTTAACAATAATCC+TGG 0.483615 5_2:+60520036 Msa0779320:CDS
TTAGGACATACTTGGTCACT+TGG 0.485157 5_2:-60518969 None:intergenic
TACAGATTCGTCTTTGGCAG+AGG 0.486047 5_2:-60518692 None:intergenic
TGCCAATACTGCTTCTGGGA+TGG 0.486395 5_2:+60519124 Msa0779320:CDS
CAGTGCCGATTTCTCTGGCT+TGG 0.490360 5_2:-60515036 None:intergenic
AGCATCAATCAACCTTGATC+CGG 0.491692 5_2:-60514332 None:intergenic
GTTTGGGCACGCCAACTTGG+CGG 0.494668 5_2:+60515733 Msa0779320:CDS
CTATTCCTTCACTAACTCTC+AGG 0.495586 5_2:+60512871 Msa0779320:CDS
TCAAGAGCAAATTCCACAAT+GGG 0.496222 5_2:-60520296 None:intergenic
GATTTCTTTAGGACAACAAA+AGG 0.498067 5_2:+60518492 Msa0779320:intron
CAAGGTGGTAAAGTGCCAAA+TGG 0.499530 5_2:+60520512 Msa0779320:CDS
GCAAACACCTGTAATTCATC+AGG 0.499584 5_2:+60519799 Msa0779320:CDS
TCGTCTCATAGCTGTTGATT+GGG 0.499678 5_2:+60516928 Msa0779320:CDS
AAGAACAGCCTTCTTGCAGC+AGG 0.499780 5_2:-60515621 None:intergenic
TTCTCACACAAGGGTTCTCA+AGG 0.501028 5_2:+60520890 Msa0779320:CDS
ACGGTTCATTGGTTGGTGAC+CGG 0.501056 5_2:+60514252 Msa0779320:CDS
AATGGTTCCAATCATAAAAG+TGG 0.502021 5_2:+60520951 Msa0779320:exon
TCAACTGATCGAACCTTGAA+AGG 0.503199 5_2:-60516474 None:intergenic
AGCTGAAAAGTAACCAAGAT+GGG 0.503713 5_2:+60520642 Msa0779320:CDS
AGGGAGCCAAGACTCAGAAA+TGG 0.503890 5_2:+60516430 Msa0779320:intron
GAAAGTAATAGGAAAATCTC+AGG 0.503966 5_2:+60520710 Msa0779320:CDS
AGAAATATCTGAAACCTTGT+CGG 0.504739 5_2:-60518803 None:intergenic
TTCCGGAAAATTCATAGTGT+GGG 0.505558 5_2:+60512049 Msa0779320:CDS
AGAAAGTCCAAGATCGCCTT+CGG 0.505754 5_2:+60520613 Msa0779320:CDS
TGTTTCATGGTCACACAAAA+GGG 0.510465 5_2:+60513015 Msa0779320:CDS
TGAAAATCGAAGATCAAAAC+CGG 0.510715 5_2:+60514313 Msa0779320:CDS
ATGCAAAACCAAGAACAAGC+AGG 0.511718 5_2:+60520767 Msa0779320:CDS
TCTTCGGTATCTAATTCAAA+GGG 0.513395 5_2:-60518889 None:intergenic
CCCTCCTCAACATTTCGGAA+TGG 0.513457 5_2:-60512085 None:intergenic
CTTCGGAATTTGTACTCTTG+GGG 0.515980 5_2:-60520577 None:intergenic
GGACATACTTGGTCACTTGG+TGG 0.516148 5_2:-60518966 None:intergenic
GCAGAAGATCATTCCTTGAA+AGG 0.517219 5_2:-60515078 None:intergenic
ATCTCTTCATCATCGGCGAT+GGG 0.520098 5_2:+60512767 Msa0779320:CDS
CGAAGATCAAAACCGGATCA+AGG 0.520422 5_2:+60514320 Msa0779320:CDS
ACTGACAAAGAATCTGATCA+AGG 0.522199 5_2:+60518562 Msa0779320:CDS
CTGATCGAACCTTGAAAGGA+AGG 0.522284 5_2:-60516470 None:intergenic
ATCAGTGGCTGAAACCCCTT+CGG 0.522666 5_2:-60519395 None:intergenic
TTCTTCGGTATCTAATTCAA+AGG 0.523243 5_2:-60518890 None:intergenic
GACGGAACTCCAGCTGCCGA+AGG 0.523716 5_2:+60519379 Msa0779320:CDS
CAATGATGCTCCTGCTTCAG+AGG 0.523848 5_2:+60516982 Msa0779320:CDS
GAAATATTTATAGTTTGGAA+AGG 0.525585 5_2:+60519639 Msa0779320:intron
AGTCCAAGATCGCCTTCGGC+GGG 0.527248 5_2:+60520617 Msa0779320:CDS
AAATCCAAGGAAACTGTTAA+GGG 0.531440 5_2:+60518754 Msa0779320:CDS
GACCAAAGATTCAGTAGGGA+AGG 0.532272 5_2:+60520820 Msa0779320:CDS
CCAAAAGAACCAAAGGAAGA+AGG 0.533227 5_2:+60514558 Msa0779320:CDS
AAGACGCGATATTTGGAAAG+AGG 0.533754 5_2:+60520741 Msa0779320:CDS
GGAATGAATACTTCCCATAC+AGG 0.535778 5_2:-60516610 None:intergenic
TGCATTATCAGCTGCTTCCG+CGG 0.535875 5_2:-60519093 None:intergenic
TTCCCAGGCCTGCTGCAAGA+AGG 0.537740 5_2:+60515613 Msa0779320:intron
AATGATAAACCCGACAATGC+AGG 0.540063 5_2:+60520401 Msa0779320:CDS
TTCTTTCGATGATATCACTT+CGG 0.542100 5_2:-60520594 None:intergenic
TTCTAAGCCTGAAACTTCCA+AGG 0.542108 5_2:+60518822 Msa0779320:CDS
GAATTACCTTCCTCTGAAGC+AGG 0.543886 5_2:-60516992 None:intergenic
AAGGGTTCTCAAGGAAATGA+TGG 0.544012 5_2:+60520899 Msa0779320:CDS
CCTGTGTGCAGTCTTTCGAA+GGG 0.545229 5_2:+60516743 Msa0779320:intron
GACACAATAGAGGGCAATGA+AGG 0.546836 5_2:+60514465 Msa0779320:intron
GATGCTCCTGCTTCAGAGGA+AGG 0.546927 5_2:+60516986 Msa0779320:CDS
ACTTTACCTCCCCGCCAAGT+TGG 0.547834 5_2:-60515744 None:intergenic
ATGAATTACAGGTGTTTGCT+TGG 0.548098 5_2:-60519795 None:intergenic
TGCAAAACCAAGAACAAGCA+GGG 0.550150 5_2:+60520768 Msa0779320:CDS
TTGTAATGACACAGCAGATG+AGG 0.550527 5_2:+60514739 Msa0779320:CDS
AAAGAACAAGCCAAAATCCA+AGG 0.552898 5_2:+60518741 Msa0779320:CDS
ACGGAACTCCAGCTGCCGAA+GGG 0.553197 5_2:+60519380 Msa0779320:CDS
TCATTGACCACAGAAACCTT+CGG 0.555563 5_2:+60520260 Msa0779320:intron
TTCAGTTCCAAAAGAACCAA+AGG 0.560178 5_2:+60514551 Msa0779320:CDS
TTGGGCACGCCAACTTGGCG+GGG 0.561044 5_2:+60515735 Msa0779320:CDS
CTCCTCAACATTTCGGAATG+GGG 0.561578 5_2:-60512083 None:intergenic
ATTCAAGAAAAGCGACTCCA+CGG 0.563574 5_2:-60519981 None:intergenic
CTGAAGAACGGTTCATTGGT+TGG 0.563589 5_2:+60514245 Msa0779320:CDS
CAAGAAATCGGCTCATGACA+AGG 0.564214 5_2:+60519193 Msa0779320:CDS
GGCACGCCAACTTGGCGGGG+AGG 0.567486 5_2:+60515738 Msa0779320:CDS
AGAAGACCAAAGATTCAGTA+GGG 0.570029 5_2:+60520816 Msa0779320:CDS
GAAAGATGGCAGGAAAGGAA+AGG 0.571880 5_2:+60519936 Msa0779320:CDS
AAGAAGACCAAAGATTCAGT+AGG 0.572388 5_2:+60520815 Msa0779320:CDS
TCCGGAAAATTCATAGTGTG+GGG 0.574465 5_2:+60512050 Msa0779320:CDS
TGTAATGACACAGCAGATGA+GGG 0.575251 5_2:+60514740 Msa0779320:CDS
GGGCCGATGTTCAGGACCGA+AGG 0.576328 5_2:-60520276 None:intergenic
TTTCCGGAAAATTCATAGTG+TGG 0.577316 5_2:+60512048 Msa0779320:CDS
CATGGTGCTAAATTACATGA+AGG 0.582212 5_2:+60520671 Msa0779320:CDS
CCAAATTCAAATAGCGAACA+AGG 0.584745 5_2:+60520494 Msa0779320:CDS
CTGACAAAGAATCTGATCAA+GGG 0.585118 5_2:+60518563 Msa0779320:CDS
AAGCTGAAAAGTAACCAAGA+TGG 0.585264 5_2:+60520641 Msa0779320:CDS
TAAGAACTCTCAACGCAACA+AGG 0.587382 5_2:-60520023 None:intergenic
CCCATTCCGAAATGTTGAGG+AGG 0.587535 5_2:+60512084 Msa0779320:CDS
CCGCAATCTTTACTTGGCGA+AGG 0.588434 5_2:+60519250 Msa0779320:CDS
CGGAACTCCAGCTGCCGAAG+GGG 0.589924 5_2:+60519381 Msa0779320:CDS
AAAGCTACAGTATCAGCAGC+GGG 0.590881 5_2:+60520349 Msa0779320:CDS
TCCTGAACATCGGCCCATTG+TGG 0.591830 5_2:+60520283 Msa0779320:CDS
ATCAAGAGCAAATTCCACAA+TGG 0.592248 5_2:-60520297 None:intergenic
AATGCAGGAGTTTACGCTCA+TGG 0.594723 5_2:+60520416 Msa0779320:CDS
ATCATAAAAGTGGTTTAGAG+GGG 0.594730 5_2:+60520961 Msa0779320:exon
ATCCCCATTCCGAAATGTTG+AGG 0.594798 5_2:+60512081 Msa0779320:CDS
TGACAAACCAGCAAAAGACT+TGG 0.595099 5_2:+60520469 Msa0779320:CDS
TTCAAGAAAAGCGACTCCAC+GGG 0.595349 5_2:-60519980 None:intergenic
AACCAAGATGGGCAGAGTCA+TGG 0.597159 5_2:+60520653 Msa0779320:CDS
AAGTCCAAGATCGCCTTCGG+CGG 0.599602 5_2:+60520616 Msa0779320:CDS
AGGAATGATCTTCTGCAGCA+TGG 0.605435 5_2:+60515085 Msa0779320:CDS
TACCCTGTGTCGGACTTCTG+TGG 0.606080 5_2:-60516631 None:intergenic
TAATGACACAGCAGATGAGG+GGG 0.608560 5_2:+60514742 Msa0779320:CDS
ATTCCACAGAAGTCCGACAC+AGG 0.608649 5_2:+60516628 Msa0779320:CDS
AACCAAATACCAACATGACA+CGG 0.609196 5_2:+60521013 Msa0779320:three_prime_UTR
TTTCTGTTGTTGCCGTTGTG+AGG 0.616515 5_2:-60520374 None:intergenic
AAGGAATATATACCCTGTGT+CGG 0.616888 5_2:-60516641 None:intergenic
TGACAAAGAATCTGATCAAG+GGG 0.619765 5_2:+60518564 Msa0779320:CDS
TAGATCCAAGTTCTCACACA+AGG 0.623451 5_2:+60520880 Msa0779320:CDS
CAAGCCATTGAGCTGAAGAA+CGG 0.627871 5_2:+60514233 Msa0779320:CDS
CCAAATGGAAAATCTCCTCA+AGG 0.629918 5_2:+60520527 Msa0779320:CDS
CCATTCCGAAATGTTGAGGA+GGG 0.631698 5_2:+60512085 Msa0779320:CDS
AGAAGATCATTCCTTGAAAG+GGG 0.638195 5_2:-60515076 None:intergenic
GTTGGCTAACCGTGTCATGT+TGG 0.640762 5_2:-60521022 None:intergenic
CCGGAAAATTCATAGTGTGG+GGG 0.642026 5_2:+60512051 Msa0779320:CDS
AAACCTTCGGTCCTGAACAT+CGG 0.642171 5_2:+60520273 Msa0779320:CDS
CAGCAGCGGGCTCCTCACAA+CGG 0.643240 5_2:+60520362 Msa0779320:CDS
GTAATGACACAGCAGATGAG+GGG 0.644262 5_2:+60514741 Msa0779320:CDS
CAAGAACATCAGTATTCCCG+TGG 0.648035 5_2:+60519964 Msa0779320:CDS
AGATAGTAGTACTACTACTG+AGG 0.650531 5_2:+60518525 Msa0779320:CDS
GCAAAACCAAGAACAAGCAG+GGG 0.651326 5_2:+60520769 Msa0779320:CDS
ATACCGAAGAAGTGAAGCAA+CGG 0.656518 5_2:+60518902 Msa0779320:CDS
TAGTGATATTGATAGTGTTG+TGG 0.658825 5_2:+60518591 Msa0779320:CDS
CTCAATGCAGGCGTCCACGA+GGG 0.661595 5_2:+60519048 Msa0779320:intron
TGATATTGATAGTGTTGTGG+AGG 0.663472 5_2:+60518594 Msa0779320:CDS
TTCCACAGAAGTCCGACACA+GGG 0.667711 5_2:+60516629 Msa0779320:CDS
GCTTGAACAAACTTTCAGTG+AGG 0.669387 5_2:+60512975 Msa0779320:intron
TTAAGAAAACCAGTCCCTCG+TGG 0.669577 5_2:-60519062 None:intergenic
AAGTACCTGAGAGTTAGTGA+AGG 0.671557 5_2:-60512876 None:intergenic
AACATCTAAAGAGTCCGACA+AGG 0.679032 5_2:+60518789 Msa0779320:CDS
ACTCAATGCAGGCGTCCACG+AGG 0.680693 5_2:+60519047 Msa0779320:intron
GCAATGAAGGAAAACAGCGA+CGG 0.683353 5_2:+60512803 Msa0779320:CDS
AAAAGCTACAGTATCAGCAG+CGG 0.686433 5_2:+60520348 Msa0779320:CDS
AAGAACTCTCAACGCAACAA+GGG 0.697627 5_2:-60520022 None:intergenic
AGATCCAAGTTCTCACACAA+GGG 0.701976 5_2:+60520881 Msa0779320:CDS
TCGCCAAGTAAAGATTGCGG+TGG 0.704028 5_2:-60519247 None:intergenic
AGATTCAGTAGGGAAGGACA+TGG 0.705058 5_2:+60520826 Msa0779320:CDS
TCAGGCTCTACACAACATCG+TGG 0.717834 5_2:+60513141 Msa0779320:intron
AATGGAAAATCTCCTCAAGG+AGG 0.725686 5_2:+60520530 Msa0779320:CDS
AATGACACAGCAGATGAGGG+GGG 0.726717 5_2:+60514743 Msa0779320:CDS
CCTTCGCCAAGTAAAGATTG+CGG 0.731180 5_2:-60519250 None:intergenic
AATTCAAATAGCGAACAAGG+TGG 0.748003 5_2:+60520497 Msa0779320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAATGATAAATAAAAA+TGG - chr5_2:60512924-60512943 None:intergenic 10.0%
!! TACTTTATTATTATCAATTA+GGG - chr5_2:60513633-60513652 None:intergenic 10.0%
!! TTCTAATAATATATGTAAAT+CGG - chr5_2:60514135-60514154 None:intergenic 10.0%
!!! TTTTTTTTTTCTTTAATGTT+TGG + chr5_2:60514833-60514852 Msa0779320:intron 10.0%
!!! TTTTTTTTTCTTTAATGTTT+GGG + chr5_2:60514834-60514853 Msa0779320:intron 10.0%
!! GTTTAGTTATAAAAATAAAA+AGG - chr5_2:60515403-60515422 None:intergenic 10.0%
!! AAATAAAAACAATTTAAACT+AGG - chr5_2:60516132-60516151 None:intergenic 10.0%
!!! ACATAAAATAATTTTTTGTT+TGG + chr5_2:60516505-60516524 Msa0779320:intron 10.0%
!! TTATTATATTTATGTATATG+TGG - chr5_2:60517358-60517377 None:intergenic 10.0%
!! ACTTATTAAAGATAAAAAAA+AGG + chr5_2:60517387-60517406 Msa0779320:intron 10.0%
!! ATTCATAATATGAAATAAAA+GGG - chr5_2:60517849-60517868 None:intergenic 10.0%
!! TATTCATAATATGAAATAAA+AGG - chr5_2:60517850-60517869 None:intergenic 10.0%
!!! TCTTTTAAATTGTAATTAAT+AGG + chr5_2:60519342-60519361 Msa0779320:intron 10.0%
!!! ATTTTAATATAAACAACTTA+GGG + chr5_2:60521076-60521095 Msa0779320:three_prime_UTR 10.0%
!! ATAAGTTTGTAAAAAGTTAA+AGG + chr5_2:60512114-60512133 Msa0779320:intron 15.0%
!! TAAGTTTGTAAAAAGTTAAA+GGG + chr5_2:60512115-60512134 Msa0779320:intron 15.0%
!!! TCATTTTCTTAAATTACTAT+CGG - chr5_2:60513519-60513538 None:intergenic 15.0%
!! CTACTTTATTATTATCAATT+AGG - chr5_2:60513634-60513653 None:intergenic 15.0%
!!! GTTTTATGTATAATTGTTAT+TGG + chr5_2:60515148-60515167 Msa0779320:intron 15.0%
!!! GATTTATTGTATTTGAATTT+TGG - chr5_2:60515959-60515978 None:intergenic 15.0%
!! ATTTACGAAATTCAAATTAT+AGG - chr5_2:60516253-60516272 None:intergenic 15.0%
!! ATAATTTGAATTTCGTAAAT+TGG + chr5_2:60516253-60516272 Msa0779320:intron 15.0%
!!! TTTTGTATTGGTTTTTAATT+TGG + chr5_2:60516325-60516344 Msa0779320:intron 15.0%
!! AACAAACTAAATATCATAAA+TGG - chr5_2:60516384-60516403 None:intergenic 15.0%
!!! TCATTTAAAAAAGTACTTTT+TGG - chr5_2:60517570-60517589 None:intergenic 15.0%
!!! AAAAAGTACTTTTTTAAATG+AGG + chr5_2:60517569-60517588 Msa0779320:intron 15.0%
!!! GTTATTGTTTTACTATTTAT+AGG - chr5_2:60517778-60517797 None:intergenic 15.0%
!! AAAAATAATTAAAAGATGTC+TGG - chr5_2:60518345-60518364 None:intergenic 15.0%
!! TTTAAATTGTAATTAATAGG+AGG + chr5_2:60519345-60519364 Msa0779320:intron 15.0%
!! TTAAATTGTAATTAATAGGA+GGG + chr5_2:60519346-60519365 Msa0779320:intron 15.0%
!! TTTGTGAAATATTTATAGTT+TGG + chr5_2:60519634-60519653 Msa0779320:intron 15.0%
!!! TTTTTGAAACATGAAAATTT+GGG - chr5_2:60519688-60519707 None:intergenic 15.0%
!!! GATTTTAATATAAACAACTT+AGG + chr5_2:60521075-60521094 Msa0779320:three_prime_UTR 15.0%
!!! TTTTAATATAAACAACTTAG+GGG + chr5_2:60521077-60521096 Msa0779320:three_prime_UTR 15.0%
!!! CAAATATCTATTTTTCTTTT+AGG + chr5_2:60521181-60521200 Msa0779320:three_prime_UTR 15.0%
!!! AAGAAATTTTGTTTTGGAAA+TGG + chr5_2:60512183-60512202 Msa0779320:intron 20.0%
!!! GTAGAAAAAGTTACTTTTTA+GGG - chr5_2:60512412-60512431 None:intergenic 20.0%
!!! AGTAGAAAAAGTTACTTTTT+AGG - chr5_2:60512413-60512432 None:intergenic 20.0%
!!! CCTTATTATCATTTAACTTT+GGG - chr5_2:60512503-60512522 None:intergenic 20.0%
!! CCAAAGTTAAATGATAATAA+GGG + chr5_2:60512501-60512520 Msa0779320:intron 20.0%
!!! GAATTTTTAATATGTTGTAG+TGG + chr5_2:60512532-60512551 Msa0779320:intron 20.0%
!!! TTATTTTTTTCCTAACACTA+TGG + chr5_2:60513108-60513127 Msa0779320:intron 20.0%
!! ACATAATTCAGTGTAATTAT+AGG + chr5_2:60513538-60513557 Msa0779320:intron 20.0%
!! ATTACTAAATATGATACTGT+TGG + chr5_2:60513892-60513911 Msa0779320:intron 20.0%
!!! CAGTTTTTGAACTTTATAAT+AGG + chr5_2:60513971-60513990 Msa0779320:intron 20.0%
!! GAAAAAAAAAACATCTTTCA+TGG - chr5_2:60514824-60514843 None:intergenic 20.0%
!!! AATATATTTTCGCTTGTTAT+AGG + chr5_2:60515207-60515226 Msa0779320:intron 20.0%
!! GTTATAAAAATAAAAAGGCT+TGG - chr5_2:60515398-60515417 None:intergenic 20.0%
!! ACTCTATAAAAGATACTATA+TGG - chr5_2:60515810-60515829 None:intergenic 20.0%
!! CAATAAATCTTAATAACTAC+AGG + chr5_2:60515970-60515989 Msa0779320:intron 20.0%
!! ATGCATTGTCTTAAAAAATA+GGG + chr5_2:60516036-60516055 Msa0779320:intron 20.0%
!! ATGGTAATATTCATTAAACA+GGG - chr5_2:60516365-60516384 None:intergenic 20.0%
!! AATGGTAATATTCATTAAAC+AGG - chr5_2:60516366-60516385 None:intergenic 20.0%
!!! TCACTACTAAATATCTTTTT+TGG - chr5_2:60516959-60516978 None:intergenic 20.0%
!!! TATTGTTTATAGTTTTGTTG+CGG - chr5_2:60517481-60517500 None:intergenic 20.0%
!!! GTATTTCTTTTTGAATAGTA+TGG + chr5_2:60517906-60517925 Msa0779320:intron 20.0%
!! TCTAGTATTAAATTTATCAG+TGG + chr5_2:60517931-60517950 Msa0779320:intron 20.0%
!! AATTAAAAATTGTTATACCC+AGG - chr5_2:60518252-60518271 None:intergenic 20.0%
!!! CACACAAAAAATATTGTTTT+AGG - chr5_2:60518990-60519009 None:intergenic 20.0%
!! GAAATATTTATAGTTTGGAA+AGG + chr5_2:60519639-60519658 Msa0779320:intron 20.0%
!!! TTTTGAAACATGAAAATTTG+GGG - chr5_2:60519687-60519706 None:intergenic 20.0%
!!! GTTTTTGAAACATGAAAATT+TGG - chr5_2:60519689-60519708 None:intergenic 20.0%
!! TTGTAACATTCAAAACATAA+TGG - chr5_2:60519892-60519911 None:intergenic 20.0%
!! ATTATATTACGAGAAAAACA+CGG - chr5_2:60520232-60520251 None:intergenic 20.0%
!!! TTTTTAATGGAAGTTTTTGT+TGG - chr5_2:60521043-60521062 None:intergenic 20.0%
!!! CACTTTCACTTTTTTTTTAA+TGG - chr5_2:60521056-60521075 None:intergenic 20.0%
! CCAAAACAAAATTTCTTCTT+TGG - chr5_2:60512180-60512199 None:intergenic 25.0%
!!! CCAAAGAAGAAATTTTGTTT+TGG + chr5_2:60512177-60512196 Msa0779320:intron 25.0%
! AACACATGTTAAAGTCATAA+CGG - chr5_2:60512314-60512333 None:intergenic 25.0%
!! AAGACATAGTTTCTTTTTGT+GGG + chr5_2:60512348-60512367 Msa0779320:intron 25.0%
! CCCAAAGTTAAATGATAATA+AGG + chr5_2:60512500-60512519 Msa0779320:intron 25.0%
!! CCCTTATTATCATTTAACTT+TGG - chr5_2:60512504-60512523 None:intergenic 25.0%
! AATGATAATAAGGGTAGTAT+TGG + chr5_2:60512510-60512529 Msa0779320:intron 25.0%
! ACAACCAAAGACAAATAATA+TGG - chr5_2:60512677-60512696 None:intergenic 25.0%
! TAAGAAAAACAAAGCAATGA+AGG + chr5_2:60512790-60512809 Msa0779320:CDS 25.0%
!!! TTAGAAACAAAGAGTGTTAA+GGG - chr5_2:60512845-60512864 None:intergenic 25.0%
!!! ATTAGAAACAAAGAGTGTTA+AGG - chr5_2:60512846-60512865 None:intergenic 25.0%
! AAACAATTAACCATAGTGTT+AGG - chr5_2:60513121-60513140 None:intergenic 25.0%
!!! TAATGTTGTTTTGTTGCTTA+TGG + chr5_2:60513228-60513247 Msa0779320:intron 25.0%
! CAAATATCACTTACCAAAAA+TGG - chr5_2:60513837-60513856 None:intergenic 25.0%
!! AATTTGTAACATGACTTTTC+TGG + chr5_2:60514161-60514180 Msa0779320:intron 25.0%
! AAAAATGATGATAAAGACAG+CGG + chr5_2:60514504-60514523 Msa0779320:CDS 25.0%
! AAAGATACATCCATAATGAA+AGG - chr5_2:60514886-60514905 None:intergenic 25.0%
! AAAAGAAAAAACATAGAGCA+GGG - chr5_2:60514948-60514967 None:intergenic 25.0%
! TTTCAAATTACAGAGAAGAT+AGG + chr5_2:60515126-60515145 Msa0779320:intron 25.0%
! AAATATGAACTGAAAAGAAC+AGG - chr5_2:60515240-60515259 None:intergenic 25.0%
! TACTCAACATTTGATCATAT+GGG - chr5_2:60515443-60515462 None:intergenic 25.0%
! ATACTCAACATTTGATCATA+TGG - chr5_2:60515444-60515463 None:intergenic 25.0%
! AAAGATTCTTTATACTGCTT+AGG + chr5_2:60515567-60515586 Msa0779320:intron 25.0%
! TTAGGATAGTAAGGTAATTA+TGG + chr5_2:60515585-60515604 Msa0779320:intron 25.0%
! ACATTGCATAAAAAAGAGAT+AGG + chr5_2:60515700-60515719 Msa0779320:CDS 25.0%
! CATGCATTGTCTTAAAAAAT+AGG + chr5_2:60516035-60516054 Msa0779320:intron 25.0%
!!! TTTTCGCGTATTTTTTGTAT+TGG + chr5_2:60516313-60516332 Msa0779320:intron 25.0%
!!! TTGGTTTTTAATTTGGTCAT+AGG + chr5_2:60516332-60516351 Msa0779320:intron 25.0%
!!! AACATTTTTGTTGTTGTATG+TGG + chr5_2:60516404-60516423 Msa0779320:intron 25.0%
!!! ACATTTTTGTTGTTGTATGT+GGG + chr5_2:60516405-60516424 Msa0779320:intron 25.0%
! TCTAACTACTTGACTAAATA+TGG + chr5_2:60516539-60516558 Msa0779320:intron 25.0%
!! AGTATCGAAACACTTTATAT+CGG - chr5_2:60516675-60516694 None:intergenic 25.0%
! TTGCACATTCATTCAAAAAA+TGG - chr5_2:60517180-60517199 None:intergenic 25.0%
! AAATCCTATTGATGAAATTC+TGG + chr5_2:60517275-60517294 Msa0779320:intron 25.0%
! AATCCTATTGATGAAATTCT+GGG + chr5_2:60517276-60517295 Msa0779320:intron 25.0%
! TGAAAGAAATAGAGAGAAAA+TGG + chr5_2:60517325-60517344 Msa0779320:intron 25.0%
! GCAACAAAACTATAAACAAT+AGG + chr5_2:60517480-60517499 Msa0779320:intron 25.0%
! TTGTGCTAGTTGTATATAAT+TGG + chr5_2:60517798-60517817 Msa0779320:intron 25.0%
! GAAATTCTGAGTAATGTTTA+AGG + chr5_2:60517876-60517895 Msa0779320:intron 25.0%
! AAAATAAAATAGTTGCCCTT+TGG - chr5_2:60518191-60518210 None:intergenic 25.0%
! ACATCTGTTATGATTTCTTT+AGG + chr5_2:60518481-60518500 Msa0779320:intron 25.0%
! ATTATTTACAGATTCGTCTT+TGG - chr5_2:60518701-60518720 None:intergenic 25.0%
!!! ATATTGTTTTAGGACATACT+TGG - chr5_2:60518980-60518999 None:intergenic 25.0%
!!! TTTTCTTAAGTTTAAAACCG+CGG + chr5_2:60519076-60519095 Msa0779320:CDS 25.0%
!!! TAGACCATTAAAGGTTTTAA+AGG + chr5_2:60519163-60519182 Msa0779320:CDS 25.0%
! AAGAAATGAGAATAGTAAAG+TGG - chr5_2:60519507-60519526 None:intergenic 25.0%
!!! TGTTTTTCATTCATTGACTT+TGG - chr5_2:60519734-60519753 None:intergenic 25.0%
!!! CAGATAAAGATTTTGAAAGA+TGG + chr5_2:60519922-60519941 Msa0779320:intron 25.0%
! TATATTCACAATGGAGAAAT+GGG - chr5_2:60520077-60520096 None:intergenic 25.0%
! ATAGTTCCATTGAAAGTAAT+AGG + chr5_2:60520699-60520718 Msa0779320:CDS 25.0%
!! GATTTTCCTATTACTTTCAA+TGG - chr5_2:60520708-60520727 None:intergenic 25.0%
! AAAAACAATCTAAACAGCTT+AGG + chr5_2:60520927-60520946 Msa0779320:CDS 25.0%
! AATCATAAAAGTGGTTTAGA+GGG + chr5_2:60520960-60520979 Msa0779320:exon 25.0%
! GCATGGAAACTTTAAAAAGT+AGG + chr5_2:60512216-60512235 Msa0779320:intron 30.0%
! AAAAGTAGCAACTTTTGCAT+TGG + chr5_2:60512280-60512299 Msa0779320:intron 30.0%
GTTATGACTTTAACATGTGT+TGG + chr5_2:60512313-60512332 Msa0779320:intron 30.0%
! CAAGACATAGTTTCTTTTTG+TGG + chr5_2:60512347-60512366 Msa0779320:intron 30.0%
TTAATATGTTGTAGTGGTGA+AGG + chr5_2:60512538-60512557 Msa0779320:intron 30.0%
AAAGACAAATAATATGGACC+GGG - chr5_2:60512671-60512690 None:intergenic 30.0%
CAAAGACAAATAATATGGAC+CGG - chr5_2:60512672-60512691 None:intergenic 30.0%
GGTAACTTACTAACTAACTA+AGG + chr5_2:60513036-60513055 Msa0779320:intron 30.0%
! CACTATGGTTAATTGTTTTC+AGG + chr5_2:60513123-60513142 Msa0779320:intron 30.0%
! TAGAGTTTTCTGTAGTAGTA+CGG + chr5_2:60513446-60513465 Msa0779320:intron 30.0%
! TGTAATTATAGGTGTTGTGT+TGG + chr5_2:60513549-60513568 Msa0779320:intron 30.0%
!! ATTCTTGCATTGTTTTGTAG+TGG + chr5_2:60513714-60513733 Msa0779320:intron 30.0%
TCTGGTGAGATTATTCATTA+CGG - chr5_2:60513784-60513803 None:intergenic 30.0%
CCTTCTTTACTTACAAAGAT+GGG - chr5_2:60513809-60513828 None:intergenic 30.0%
CCATCTTTGTAAGTAAAGAA+GGG + chr5_2:60513807-60513826 Msa0779320:intron 30.0%
TGATATTTGAGTGTATTGTC+TGG + chr5_2:60513848-60513867 Msa0779320:intron 30.0%
GTTCACAAAGTTTACTTAAG+AGG + chr5_2:60513914-60513933 Msa0779320:intron 30.0%
AGGATAATATTGATGTCATG+AGG + chr5_2:60513934-60513953 Msa0779320:intron 30.0%
ACATCGATATACTGTGATTA+CGG - chr5_2:60514094-60514113 None:intergenic 30.0%
! TTTTGATCTTCGATTTTCAC+GGG - chr5_2:60514312-60514331 None:intergenic 30.0%
!! GTTTTGATCTTCGATTTTCA+CGG - chr5_2:60514313-60514332 None:intergenic 30.0%
TGAAAATCGAAGATCAAAAC+CGG + chr5_2:60514313-60514332 Msa0779320:CDS 30.0%
! ATCTCTATCTGAAACAGAAT+TGG - chr5_2:60514359-60514378 None:intergenic 30.0%
AGAGTGAGAAAAGAAAACAA+GGG - chr5_2:60514436-60514455 None:intergenic 30.0%
AAGAGTGAGAAAAGAAAACA+AGG - chr5_2:60514437-60514456 None:intergenic 30.0%
! TTTCTTTTACGACACAATAG+AGG + chr5_2:60514455-60514474 Msa0779320:intron 30.0%
! TTCTTTTACGACACAATAGA+GGG + chr5_2:60514456-60514475 Msa0779320:intron 30.0%
!!! CGTTTTAGAAGTGAAAGTTT+TGG + chr5_2:60514667-60514686 Msa0779320:intron 30.0%
! CTGAAGTACTACTAAGAAAA+GGG - chr5_2:60514801-60514820 None:intergenic 30.0%
ATGATCTGATCCTTTCATTA+TGG + chr5_2:60514873-60514892 Msa0779320:intron 30.0%
CAAAAGAAAAAACATAGAGC+AGG - chr5_2:60514949-60514968 None:intergenic 30.0%
!!! CTGCTCTATGTTTTTTCTTT+TGG + chr5_2:60514947-60514966 Msa0779320:intron 30.0%
!!! TCTATGTTTTTTCTTTTGGC+AGG + chr5_2:60514951-60514970 Msa0779320:intron 30.0%
!!! CTATGTTTTTTCTTTTGGCA+GGG + chr5_2:60514952-60514971 Msa0779320:intron 30.0%
GTTGCTAGAACTGTTATATT+TGG + chr5_2:60514974-60514993 Msa0779320:CDS 30.0%
AAATGTTGAGTATGCTGATA+AGG + chr5_2:60515451-60515470 Msa0779320:intron 30.0%
TAACTGGAAAACTATCTCAT+CGG - chr5_2:60515507-60515526 None:intergenic 30.0%
TTATACTGCTTAGGATAGTA+AGG + chr5_2:60515576-60515595 Msa0779320:intron 30.0%
! GTAATTATGGTATTTTTCCC+AGG + chr5_2:60515598-60515617 Msa0779320:intron 30.0%
TTGCATAAAAAAGAGATAGG+AGG + chr5_2:60515703-60515722 Msa0779320:CDS 30.0%
TGCATAAAAAAGAGATAGGA+GGG + chr5_2:60515704-60515723 Msa0779320:CDS 30.0%
TAATGCTGATCACGAAAATA+TGG + chr5_2:60516004-60516023 Msa0779320:intron 30.0%
AAAAATAGGGAGTTACATCA+TGG + chr5_2:60516049-60516068 Msa0779320:intron 30.0%
AAAATAGGGAGTTACATCAT+GGG + chr5_2:60516050-60516069 Msa0779320:intron 30.0%
! GTTGATAGAAATGTTGAACA+GGG - chr5_2:60516221-60516240 None:intergenic 30.0%
!! AGTTGATAGAAATGTTGAAC+AGG - chr5_2:60516222-60516241 None:intergenic 30.0%
AGTCAAGTAGTTAGAAAACA+AGG - chr5_2:60516534-60516553 None:intergenic 30.0%
ACTTGACTAAATATGGATAC+AGG + chr5_2:60516546-60516565 Msa0779320:intron 30.0%
AGGCCAAAGAAAATGAAATA+AGG + chr5_2:60516566-60516585 Msa0779320:intron 30.0%
GGCCAAAGAAAATGAAATAA+GGG + chr5_2:60516567-60516586 Msa0779320:intron 30.0%
!! GTCCCTTATTTCATTTTCTT+TGG - chr5_2:60516572-60516591 None:intergenic 30.0%
CTTTATATCGGGAAAAGAAA+AGG - chr5_2:60516663-60516682 None:intergenic 30.0%
GTATCGAAACACTTTATATC+GGG - chr5_2:60516674-60516693 None:intergenic 30.0%
!! AAATGATTTTGACACTTGTG+AGG - chr5_2:60517211-60517230 None:intergenic 30.0%
! CACAAGTGTCAAAATCATTT+TGG + chr5_2:60517211-60517230 Msa0779320:intron 30.0%
!!! CGGTAGTTTGTAATTTGTTT+TGG - chr5_2:60517461-60517480 None:intergenic 30.0%
TACTATTTATAGGTCTGCTT+TGG - chr5_2:60517768-60517787 None:intergenic 30.0%
! AAATTGTATTTTGCCACCAA+AGG + chr5_2:60518172-60518191 Msa0779320:intron 30.0%
! AATTGTATTTTGCCACCAAA+GGG + chr5_2:60518173-60518192 Msa0779320:intron 30.0%
!! GATTTCTTTAGGACAACAAA+AGG + chr5_2:60518492-60518511 Msa0779320:intron 30.0%
!! TAGTGATATTGATAGTGTTG+TGG + chr5_2:60518591-60518610 Msa0779320:CDS 30.0%
! TTTTCAAAATCATCGTCAGA+AGG - chr5_2:60518628-60518647 None:intergenic 30.0%
!! TTCTGACGATGATTTTGAAA+AGG + chr5_2:60518627-60518646 Msa0779320:CDS 30.0%
! TTAACAGTTTCCTTGGATTT+TGG - chr5_2:60518754-60518773 None:intergenic 30.0%
AAAATCCAAGGAAACTGTTA+AGG + chr5_2:60518753-60518772 Msa0779320:CDS 30.0%
AAATCCAAGGAAACTGTTAA+GGG + chr5_2:60518754-60518773 Msa0779320:CDS 30.0%
! AGAAATATCTGAAACCTTGT+CGG - chr5_2:60518806-60518825 None:intergenic 30.0%
ATCTAATTCAAAGGGAAGAT+TGG - chr5_2:60518884-60518903 None:intergenic 30.0%
TCTTCGGTATCTAATTCAAA+GGG - chr5_2:60518892-60518911 None:intergenic 30.0%
TTCTTCGGTATCTAATTCAA+AGG - chr5_2:60518893-60518912 None:intergenic 30.0%
!! AGAGCCTTTAAAACCTTTAA+TGG - chr5_2:60519170-60519189 None:intergenic 30.0%
!!! ATTAAAGGTTTTAAAGGCTC+TGG + chr5_2:60519169-60519188 Msa0779320:CDS 30.0%
! CGCAAAAAGTGAGTATTTTA+TGG + chr5_2:60519427-60519446 Msa0779320:intron 30.0%
TGTATTTGATCTTCCATACT+TGG + chr5_2:60519540-60519559 Msa0779320:intron 30.0%
AATAACTTTACCACCAAGTA+TGG - chr5_2:60519556-60519575 None:intergenic 30.0%
!! ATTCATCAGGTTGGTTAAAT+AGG + chr5_2:60519812-60519831 Msa0779320:intron 30.0%
!! TAAAGATTTTGAAAGATGGC+AGG + chr5_2:60519926-60519945 Msa0779320:CDS 30.0%
AGAGTTCTTAACAATAATCC+TGG + chr5_2:60520036-60520055 Msa0779320:CDS 30.0%
GTATATTCACAATGGAGAAA+TGG - chr5_2:60520078-60520097 None:intergenic 30.0%
CAAAGCTAGTATATTCACAA+TGG - chr5_2:60520086-60520105 None:intergenic 30.0%
! GCTTTGTTAAAATTGTCAAC+TGG + chr5_2:60520100-60520119 Msa0779320:intron 30.0%
!! TTTGGAAGCGTTCAATTTAT+GGG - chr5_2:60520127-60520146 None:intergenic 30.0%
!!! TTTTGGAAGCGTTCAATTTA+TGG - chr5_2:60520128-60520147 None:intergenic 30.0%
TTCTTTCGATGATATCACTT+CGG - chr5_2:60520597-60520616 None:intergenic 30.0%
GAAAGTAATAGGAAAATCTC+AGG + chr5_2:60520710-60520729 Msa0779320:CDS 30.0%
AATCTAAACAGCTTAGGAAA+TGG + chr5_2:60520933-60520952 Msa0779320:CDS 30.0%
AATGGTTCCAATCATAAAAG+TGG + chr5_2:60520951-60520970 Msa0779320:exon 30.0%
!! CTCTAAACCACTTTTATGAT+TGG - chr5_2:60520961-60520980 None:intergenic 30.0%
CAATCATAAAAGTGGTTTAG+AGG + chr5_2:60520959-60520978 Msa0779320:exon 30.0%
ATCATAAAAGTGGTTTAGAG+GGG + chr5_2:60520961-60520980 Msa0779320:exon 30.0%
TTTCCGGAAAATTCATAGTG+TGG + chr5_2:60512048-60512067 Msa0779320:CDS 35.0%
TTCCGGAAAATTCATAGTGT+GGG + chr5_2:60512049-60512068 Msa0779320:CDS 35.0%
ATGCTTAAACAATGCCCTTA+GGG - chr5_2:60512258-60512277 None:intergenic 35.0%
TTCCTTAAACAATGCCCTTA+GGG + chr5_2:60512371-60512390 Msa0779320:intron 35.0%
! CTTTTACTACAATCGGGTTT+GGG - chr5_2:60512619-60512638 None:intergenic 35.0%
CGGTCCATATTATTTGTCTT+TGG + chr5_2:60512670-60512689 Msa0779320:intron 35.0%
TGTCTTTGGTTGTAGTAATC+AGG + chr5_2:60512684-60512703 Msa0779320:intron 35.0%
GTCTTTGGTTGTAGTAATCA+GGG + chr5_2:60512685-60512704 Msa0779320:intron 35.0%
! CGTTTTCATCTCTTCATCAT+CGG + chr5_2:60512760-60512779 Msa0779320:CDS 35.0%
TGAGAGTTAGTGAAGGAATA+GGG - chr5_2:60512872-60512891 None:intergenic 35.0%
TTGTTTCATGGTCACACAAA+AGG + chr5_2:60513014-60513033 Msa0779320:CDS 35.0%
TGTTTCATGGTCACACAAAA+GGG + chr5_2:60513015-60513034 Msa0779320:CDS 35.0%
GATTAAACACTCCTTGGATT+AGG - chr5_2:60513611-60513630 None:intergenic 35.0%
ATTAGGGATTAAACACTCCT+TGG - chr5_2:60513617-60513636 None:intergenic 35.0%
! TACTTACAAAGATGGGTTTC+TGG - chr5_2:60513802-60513821 None:intergenic 35.0%
CCCATCTTTGTAAGTAAAGA+AGG + chr5_2:60513806-60513825 Msa0779320:intron 35.0%
CCCTTCTTTACTTACAAAGA+TGG - chr5_2:60513810-60513829 None:intergenic 35.0%
!!! AAAGAAGGGTTTGCCATTTT+TGG + chr5_2:60513821-60513840 Msa0779320:intron 35.0%
! TTTGATCTTCGATTTTCACG+GGG - chr5_2:60514311-60514330 None:intergenic 35.0%
TTCAGTTCCAAAAGAACCAA+AGG + chr5_2:60514551-60514570 Msa0779320:CDS 35.0%
TGGATAAACCGAAAAACTCA+AGG + chr5_2:60514687-60514706 Msa0779320:CDS 35.0%
! GCTGAAGTACTACTAAGAAA+AGG - chr5_2:60514802-60514821 None:intergenic 35.0%
TTGTCTTGTGAATTCTGCTA+TGG + chr5_2:60514997-60515016 Msa0779320:CDS 35.0%
AGAAGATCATTCCTTGAAAG+GGG - chr5_2:60515079-60515098 None:intergenic 35.0%
CAGAAGATCATTCCTTGAAA+GGG - chr5_2:60515080-60515099 None:intergenic 35.0%
! GATGAGATAGTTTTCCAGTT+AGG + chr5_2:60515506-60515525 Msa0779320:intron 35.0%
!! TTCTTGATTTGCATCCTAAC+TGG - chr5_2:60515523-60515542 None:intergenic 35.0%
GCATAAAAAAGAGATAGGAG+GGG + chr5_2:60515705-60515724 Msa0779320:CDS 35.0%
CATAAAAAAGAGATAGGAGG+GGG + chr5_2:60515706-60515725 Msa0779320:CDS 35.0%
CCAAAAAGAAAACCCTTTCA+AGG - chr5_2:60516103-60516122 None:intergenic 35.0%
! CCTTGAAAGGGTTTTCTTTT+TGG + chr5_2:60516100-60516119 Msa0779320:intron 35.0%
ACATATCAGCATCAGATACA+AGG - chr5_2:60516160-60516179 None:intergenic 35.0%
AAGGAATATATACCCTGTGT+CGG - chr5_2:60516644-60516663 None:intergenic 35.0%
AAACTCAATGGATCGAAGTT+TGG + chr5_2:60516902-60516921 Msa0779320:CDS 35.0%
AACTCAATGGATCGAAGTTT+GGG + chr5_2:60516903-60516922 Msa0779320:CDS 35.0%
! CTGAAGTATGATAATGTCAC+AGG - chr5_2:60517116-60517135 None:intergenic 35.0%
AGACCCAGAATTTCATCAAT+AGG - chr5_2:60517282-60517301 None:intergenic 35.0%
GGCACAATACATCATGAAAA+AGG + chr5_2:60517501-60517520 Msa0779320:intron 35.0%
GTTCAATGTTATGGTGTGAA+GGG - chr5_2:60517530-60517549 None:intergenic 35.0%
AGTTCAATGTTATGGTGTGA+AGG - chr5_2:60517531-60517550 None:intergenic 35.0%
ACATGGTGAGTTCAATGTTA+TGG - chr5_2:60517539-60517558 None:intergenic 35.0%
TAACATTGAACTCACCATGT+CGG + chr5_2:60517539-60517558 Msa0779320:intron 35.0%
AGGGATAGCAAAATCGAAAA+TGG - chr5_2:60517830-60517849 None:intergenic 35.0%
GCTATGATCTGTTGTCAATT+CGG - chr5_2:60518039-60518058 None:intergenic 35.0%
GCCTACAAAATGTTCTATGA+AGG + chr5_2:60518057-60518076 Msa0779320:intron 35.0%
! GCCTTCATAGAACATTTTGT+AGG - chr5_2:60518061-60518080 None:intergenic 35.0%
TCTTACTGTTGAATGTGCAT+TGG - chr5_2:60518133-60518152 None:intergenic 35.0%
ATAAAATAGTTGCCCTTTGG+TGG - chr5_2:60518188-60518207 None:intergenic 35.0%
CAGTATGTATACATGTTCCT+GGG + chr5_2:60518232-60518251 Msa0779320:intron 35.0%
GCACATATTGTTCTAGTGTT+GGG - chr5_2:60518308-60518327 None:intergenic 35.0%
AGCACATATTGTTCTAGTGT+TGG - chr5_2:60518309-60518328 None:intergenic 35.0%
CTAGACATCAGAACAATATG+TGG + chr5_2:60518395-60518414 Msa0779320:intron 35.0%
AGATAGTAGTACTACTACTG+AGG + chr5_2:60518525-60518544 Msa0779320:CDS 35.0%
ACTGACAAAGAATCTGATCA+AGG + chr5_2:60518562-60518581 Msa0779320:CDS 35.0%
CTGACAAAGAATCTGATCAA+GGG + chr5_2:60518563-60518582 Msa0779320:CDS 35.0%
TGACAAAGAATCTGATCAAG+GGG + chr5_2:60518564-60518583 Msa0779320:CDS 35.0%
!! TGATATTGATAGTGTTGTGG+AGG + chr5_2:60518594-60518613 Msa0779320:CDS 35.0%
! GTTCTTTTCTTCAGAAGACA+CGG - chr5_2:60518728-60518747 None:intergenic 35.0%
AAAGAACAAGCCAAAATCCA+AGG + chr5_2:60518741-60518760 Msa0779320:CDS 35.0%
CAAATCATCTTCTGTTTCCT+TGG - chr5_2:60518842-60518861 None:intergenic 35.0%
TATGGTAGCTGATATGCAAT+AGG + chr5_2:60519306-60519325 Msa0779320:intron 35.0%
!! TTTGCGTTTTGACATATCAG+TGG - chr5_2:60519413-60519432 None:intergenic 35.0%
ATTTGATCTTCCATACTTGG+TGG + chr5_2:60519543-60519562 Msa0779320:intron 35.0%
AGATCACTACAATCAGTTAC+AGG - chr5_2:60519604-60519623 None:intergenic 35.0%
ATGAATTACAGGTGTTTGCT+TGG - chr5_2:60519798-60519817 None:intergenic 35.0%
TAACCAACCTGATGAATTAC+AGG - chr5_2:60519809-60519828 None:intergenic 35.0%
!! ATTTTGAAAGATGGCAGGAA+AGG + chr5_2:60519931-60519950 Msa0779320:CDS 35.0%
!! TTGGAAGCGTTCAATTTATG+GGG - chr5_2:60520126-60520145 None:intergenic 35.0%
TCAAGAGCAAATTCCACAAT+GGG - chr5_2:60520299-60520318 None:intergenic 35.0%
ATCAAGAGCAAATTCCACAA+TGG - chr5_2:60520300-60520319 None:intergenic 35.0%
CCTTGTTCGCTATTTGAATT+TGG - chr5_2:60520497-60520516 None:intergenic 35.0%
CCAAATTCAAATAGCGAACA+AGG + chr5_2:60520494-60520513 Msa0779320:CDS 35.0%
AATTCAAATAGCGAACAAGG+TGG + chr5_2:60520497-60520516 Msa0779320:CDS 35.0%
ACTTCGGAATTTGTACTCTT+GGG - chr5_2:60520581-60520600 None:intergenic 35.0%
AAGCTGAAAAGTAACCAAGA+TGG + chr5_2:60520641-60520660 Msa0779320:CDS 35.0%
AGCTGAAAAGTAACCAAGAT+GGG + chr5_2:60520642-60520661 Msa0779320:CDS 35.0%
! CATGGTGCTAAATTACATGA+AGG + chr5_2:60520671-60520690 Msa0779320:CDS 35.0%
AAGAAAGAAGACGCGATATT+TGG + chr5_2:60520734-60520753 Msa0779320:CDS 35.0%
!! GGGAAAATGTTTCTAGGAAA+AGG + chr5_2:60520789-60520808 Msa0779320:CDS 35.0%
! ACTGAATCTTTGGTCTTCTT+TGG - chr5_2:60520815-60520834 None:intergenic 35.0%
AAGAAGACCAAAGATTCAGT+AGG + chr5_2:60520815-60520834 Msa0779320:CDS 35.0%
AGAAGACCAAAGATTCAGTA+GGG + chr5_2:60520816-60520835 Msa0779320:CDS 35.0%
! TGTTGGTATTTGGTTCAAAC+TGG - chr5_2:60521008-60521027 None:intergenic 35.0%
AACCAAATACCAACATGACA+CGG + chr5_2:60521013-60521032 Msa0779320:three_prime_UTR 35.0%
TCCGGAAAATTCATAGTGTG+GGG + chr5_2:60512050-60512069 Msa0779320:CDS 40.0%
AAATGCTAACAAGTGCCCTA+AGG + chr5_2:60512138-60512157 Msa0779320:intron 40.0%
AATGCTAACAAGTGCCCTAA+GGG + chr5_2:60512139-60512158 Msa0779320:intron 40.0%
CTTCTTAACAAGTGCCCTTA+GGG - chr5_2:60512156-60512175 None:intergenic 40.0%
TCTTCTTAACAAGTGCCCTT+AGG - chr5_2:60512157-60512176 None:intergenic 40.0%
GAAATGGTGCATTCAATGCA+TGG + chr5_2:60512199-60512218 Msa0779320:intron 40.0%
AAATGCTAACAAGTGCCCTA+AGG + chr5_2:60512138-60512157 Msa0779320:intron 40.0%
AATGCTAACAAGTGCCCTAA+GGG + chr5_2:60512139-60512158 Msa0779320:intron 40.0%
GATGCTTAAACAATGCCCTT+AGG - chr5_2:60512259-60512278 None:intergenic 40.0%
GTTCCTTAAACAATGCCCTT+AGG + chr5_2:60512370-60512389 Msa0779320:intron 40.0%
ATCCTTAACAAGTGCCCTAA+GGG + chr5_2:60512462-60512481 Msa0779320:intron 40.0%
! AGTGGTGAAGGTATATGTGT+AGG + chr5_2:60512550-60512569 Msa0779320:intron 40.0%
! GTGGTGAAGGTATATGTGTA+GGG + chr5_2:60512551-60512570 Msa0779320:intron 40.0%
! TGGTGAAGGTATATGTGTAG+GGG + chr5_2:60512552-60512571 Msa0779320:intron 40.0%
! GGTATATGTGTAGGGGTATA+AGG + chr5_2:60512559-60512578 Msa0779320:intron 40.0%
! TGTTGGTTACGATGACAAAG+TGG - chr5_2:60512593-60512612 None:intergenic 40.0%
! GCTTTTACTACAATCGGGTT+TGG - chr5_2:60512620-60512639 None:intergenic 40.0%
! ATCCGGGCTTTTACTACAAT+CGG - chr5_2:60512626-60512645 None:intergenic 40.0%
CTGAGAGTTAGTGAAGGAAT+AGG - chr5_2:60512873-60512892 None:intergenic 40.0%
CTATTCCTTCACTAACTCTC+AGG + chr5_2:60512871-60512890 Msa0779320:CDS 40.0%
AAGTACCTGAGAGTTAGTGA+AGG - chr5_2:60512879-60512898 None:intergenic 40.0%
GCTTGAACAAACTTTCAGTG+AGG + chr5_2:60512975-60512994 Msa0779320:intron 40.0%
GAACAAACTTTCAGTGAGGT+TGG + chr5_2:60512979-60512998 Msa0779320:CDS 40.0%
TCTACACAACATCGTGGTTT+CGG + chr5_2:60513147-60513166 Msa0779320:CDS 40.0%
! TAGTTTTCCGCTGTTGTACA+AGG + chr5_2:60513406-60513425 Msa0779320:intron 40.0%
! AGTTTTCCGCTGTTGTACAA+GGG + chr5_2:60513407-60513426 Msa0779320:intron 40.0%
TTAAGACCCTTGTACAACAG+CGG - chr5_2:60513416-60513435 None:intergenic 40.0%
TCAAAAACTGTATCCCTCCT+CGG - chr5_2:60513961-60513980 None:intergenic 40.0%
TTGCTTCACTAGTATCAGGT+TGG + chr5_2:60514014-60514033 Msa0779320:intron 40.0%
! CGTGCTTCACTACAATTTTC+CGG - chr5_2:60514274-60514293 None:intergenic 40.0%
AGCATCAATCAACCTTGATC+CGG - chr5_2:60514335-60514354 None:intergenic 40.0%
GTGAGAAAAGAAAACAAGGG+AGG - chr5_2:60514433-60514452 None:intergenic 40.0%
!! GATAAAGACAGCGGATTATC+TGG + chr5_2:60514513-60514532 Msa0779320:CDS 40.0%
!!! GGTTCTTTTGGAACTGAAAC+AGG - chr5_2:60514549-60514568 None:intergenic 40.0%
!!! CCTTCTTCCTTTGGTTCTTT+TGG - chr5_2:60514561-60514580 None:intergenic 40.0%
CCAAAAGAACCAAAGGAAGA+AGG + chr5_2:60514558-60514577 Msa0779320:CDS 40.0%
CAATCACAACCTTCTTCCTT+TGG - chr5_2:60514570-60514589 None:intergenic 40.0%
!!! GCTGCTTTTTTTATTTCCGC+AGG - chr5_2:60514716-60514735 None:intergenic 40.0%
TTGTAATGACACAGCAGATG+AGG + chr5_2:60514739-60514758 Msa0779320:CDS 40.0%
TGTAATGACACAGCAGATGA+GGG + chr5_2:60514740-60514759 Msa0779320:CDS 40.0%
CTATTAAGCATCCCCTTTCA+AGG + chr5_2:60515065-60515084 Msa0779320:CDS 40.0%
GCAGAAGATCATTCCTTGAA+AGG - chr5_2:60515081-60515100 None:intergenic 40.0%
GTGATAACTGCTAGCTGATT+AGG + chr5_2:60515828-60515847 Msa0779320:intron 40.0%
AAGCTTCCATTTCTGAGTCT+TGG - chr5_2:60516439-60516458 None:intergenic 40.0%
TGTCAGAAACCTTCCTTTCA+AGG + chr5_2:60516461-60516480 Msa0779320:CDS 40.0%
TCAACTGATCGAACCTTGAA+AGG - chr5_2:60516477-60516496 None:intergenic 40.0%
GGAATGAATACTTCCCATAC+AGG - chr5_2:60516613-60516632 None:intergenic 40.0%
! ATTTTCAGCATCTTGCTTGC+AGG - chr5_2:60516789-60516808 None:intergenic 40.0%
!! AAGTTTCCTGTTGCTGTTTC+AGG + chr5_2:60516871-60516890 Msa0779320:intron 40.0%
! TCGTCTCATAGCTGTTGATT+GGG + chr5_2:60516928-60516947 Msa0779320:CDS 40.0%
!!! ACTTTTTGGTTGTTCCGACA+TGG - chr5_2:60517556-60517575 None:intergenic 40.0%
GGTGTCTGATAAGTATCCTA+TGG + chr5_2:60517590-60517609 Msa0779320:intron 40.0%
CTTCAGAAATGGACAACCAT+AGG - chr5_2:60517609-60517628 None:intergenic 40.0%
ATAGCCTCTGTTGTCAATAG+CGG + chr5_2:60517665-60517684 Msa0779320:intron 40.0%
!!! TCCTGATTTTTTCGCTACAG+TGG - chr5_2:60517700-60517719 None:intergenic 40.0%
CTGTTGTCAATTCGGAAATG+CGG - chr5_2:60518031-60518050 None:intergenic 40.0%
GCAGTATGTATACATGTTCC+TGG + chr5_2:60518231-60518250 Msa0779320:intron 40.0%
AACATCTAAAGAGTCCGACA+AGG + chr5_2:60518789-60518808 Msa0779320:CDS 40.0%
TTCTAAGCCTGAAACTTCCA+AGG + chr5_2:60518822-60518841 Msa0779320:CDS 40.0%
TCTGTTTCCTTGGAAGTTTC+AGG - chr5_2:60518832-60518851 None:intergenic 40.0%
ATACCGAAGAAGTGAAGCAA+CGG + chr5_2:60518902-60518921 Msa0779320:CDS 40.0%
AAACCGTTGCTTCACTTCTT+CGG - chr5_2:60518908-60518927 None:intergenic 40.0%
! AAGCAACGGTTTTCTGCATT+TGG + chr5_2:60518916-60518935 Msa0779320:CDS 40.0%
TTAGGACATACTTGGTCACT+TGG - chr5_2:60518972-60518991 None:intergenic 40.0%
ACTCCTCTATTACTCAATGC+AGG + chr5_2:60519036-60519055 Msa0779320:intron 40.0%
!!! TGGGATGGGTATTTTGGTAA+AGG + chr5_2:60519139-60519158 Msa0779320:CDS 40.0%
!!! GGGATGGGTATTTTGGTAAA+GGG + chr5_2:60519140-60519159 Msa0779320:CDS 40.0%
GGTAAAGGGTAGACCATTAA+AGG + chr5_2:60519154-60519173 Msa0779320:CDS 40.0%
!! AAAGGCTCTGGACAAGAAAT+CGG + chr5_2:60519181-60519200 Msa0779320:CDS 40.0%
TAGGAGGGACTTATTCTTGA+CGG + chr5_2:60519361-60519380 Msa0779320:intron 40.0%
GCAAACACCTGTAATTCATC+AGG + chr5_2:60519799-60519818 Msa0779320:CDS 40.0%
ACACCTGTAATTCATCAGGT+TGG + chr5_2:60519803-60519822 Msa0779320:intron 40.0%
ATTCAAGAAAAGCGACTCCA+CGG - chr5_2:60519984-60520003 None:intergenic 40.0%
AAGAACTCTCAACGCAACAA+GGG - chr5_2:60520025-60520044 None:intergenic 40.0%
TAAGAACTCTCAACGCAACA+AGG - chr5_2:60520026-60520045 None:intergenic 40.0%
! GGGTGTAATTGTTTGTTACC+AGG - chr5_2:60520057-60520076 None:intergenic 40.0%
TCATTGACCACAGAAACCTT+CGG + chr5_2:60520260-60520279 Msa0779320:intron 40.0%
CGTTACGAAGTTTCAGTTTC+TGG - chr5_2:60520328-60520347 None:intergenic 40.0%
AAAAGCTACAGTATCAGCAG+CGG + chr5_2:60520348-60520367 Msa0779320:CDS 40.0%
AATGATAAACCCGACAATGC+AGG + chr5_2:60520401-60520420 Msa0779320:CDS 40.0%
TGACAAACCAGCAAAAGACT+TGG + chr5_2:60520469-60520488 Msa0779320:CDS 40.0%
! TTTGGTACCAAGTCTTTTGC+TGG - chr5_2:60520479-60520498 None:intergenic 40.0%
! CCTTGAGGAGATTTTCCATT+TGG - chr5_2:60520530-60520549 None:intergenic 40.0%
CCAAATGGAAAATCTCCTCA+AGG + chr5_2:60520527-60520546 Msa0779320:CDS 40.0%
AATGGAAAATCTCCTCAAGG+AGG + chr5_2:60520530-60520549 Msa0779320:CDS 40.0%
CTTCGGAATTTGTACTCTTG+GGG - chr5_2:60520580-60520599 None:intergenic 40.0%
CACTTCGGAATTTGTACTCT+TGG - chr5_2:60520582-60520601 None:intergenic 40.0%
AAGACGCGATATTTGGAAAG+AGG + chr5_2:60520741-60520760 Msa0779320:CDS 40.0%
ATGCAAAACCAAGAACAAGC+AGG + chr5_2:60520767-60520786 Msa0779320:CDS 40.0%
TGCAAAACCAAGAACAAGCA+GGG + chr5_2:60520768-60520787 Msa0779320:CDS 40.0%
AAGCAGGGGAAAATGTTTCT+AGG + chr5_2:60520783-60520802 Msa0779320:CDS 40.0%
TAGATCCAAGTTCTCACACA+AGG + chr5_2:60520880-60520899 Msa0779320:CDS 40.0%
AGATCCAAGTTCTCACACAA+GGG + chr5_2:60520881-60520900 Msa0779320:CDS 40.0%
AAGGGTTCTCAAGGAAATGA+TGG + chr5_2:60520899-60520918 Msa0779320:CDS 40.0%
AAAAGTGGTTTAGAGGGGTT+TGG + chr5_2:60520966-60520985 Msa0779320:exon 40.0%
AACCGTGTCATGTTGGTATT+TGG - chr5_2:60521018-60521037 None:intergenic 40.0%
! CCCCCACACTATGAATTTTC+CGG - chr5_2:60512054-60512073 None:intergenic 45.0%
CCGGAAAATTCATAGTGTGG+GGG + chr5_2:60512051-60512070 Msa0779320:CDS 45.0%
ATCCCCATTCCGAAATGTTG+AGG + chr5_2:60512081-60512100 Msa0779320:CDS 45.0%
CTCCTCAACATTTCGGAATG+GGG - chr5_2:60512086-60512105 None:intergenic 45.0%
CCTCCTCAACATTTCGGAAT+GGG - chr5_2:60512087-60512106 None:intergenic 45.0%
CCATTCCGAAATGTTGAGGA+GGG + chr5_2:60512085-60512104 Msa0779320:CDS 45.0%
TCTCACCCTCCTCAACATTT+CGG - chr5_2:60512093-60512112 None:intergenic 45.0%
!! TGCCCTAAGGGCATTGTTTA+AGG - chr5_2:60512253-60512272 None:intergenic 45.0%
CTTGCTAACAAGTGCCCTAA+GGG - chr5_2:60512388-60512407 None:intergenic 45.0%
TCTTGCTAACAAGTGCCCTA+AGG - chr5_2:60512389-60512408 None:intergenic 45.0%
CATCCTTAACAAGTGCCCTA+AGG + chr5_2:60512461-60512480 Msa0779320:intron 45.0%
CTTGCTAACAAGTGCCCTTA+GGG - chr5_2:60512479-60512498 None:intergenic 45.0%
TCTTGCTAACAAGTGCCCTT+AGG - chr5_2:60512480-60512499 None:intergenic 45.0%
ACCCGATTGTAGTAAAAGCC+CGG + chr5_2:60512621-60512640 Msa0779320:intron 45.0%
! TCCGGGCTTTTACTACAATC+GGG - chr5_2:60512625-60512644 None:intergenic 45.0%
TTGTAGTAAAAGCCCGGATC+CGG + chr5_2:60512627-60512646 Msa0779320:intron 45.0%
GACAAATAATATGGACCGGG+TGG - chr5_2:60512668-60512687 None:intergenic 45.0%
ATCTCTTCATCATCGGCGAT+GGG + chr5_2:60512767-60512786 Msa0779320:CDS 45.0%
GCAATGAAGGAAAACAGCGA+CGG + chr5_2:60512803-60512822 Msa0779320:CDS 45.0%
! ACCTGTTAGGCGTTGTTTCA+TGG + chr5_2:60513002-60513021 Msa0779320:CDS 45.0%
ACCATGAAACAACGCCTAAC+AGG - chr5_2:60513006-60513025 None:intergenic 45.0%
ATACCGTCTAGTGACAGCTA+TGG + chr5_2:60513375-60513394 Msa0779320:intron 45.0%
TTGCCATAGCTGTCACTAGA+CGG - chr5_2:60513381-60513400 None:intergenic 45.0%
! TATAGGTGTTGTGTTGGCGT+CGG + chr5_2:60513555-60513574 Msa0779320:intron 45.0%
TATTGATGTCATGAGGACCG+AGG + chr5_2:60513941-60513960 Msa0779320:intron 45.0%
GTGCTTGCTTCACTAGTATC+AGG + chr5_2:60514010-60514029 Msa0779320:intron 45.0%
CAAGCCATTGAGCTGAAGAA+CGG + chr5_2:60514233-60514252 Msa0779320:CDS 45.0%
TGAACCGTTCTTCAGCTCAA+TGG - chr5_2:60514240-60514259 None:intergenic 45.0%
TGAGCTGAAGAACGGTTCAT+TGG + chr5_2:60514241-60514260 Msa0779320:CDS 45.0%
CTGAAGAACGGTTCATTGGT+TGG + chr5_2:60514245-60514264 Msa0779320:CDS 45.0%
CGAAGATCAAAACCGGATCA+AGG + chr5_2:60514320-60514339 Msa0779320:CDS 45.0%
GACACAATAGAGGGCAATGA+AGG + chr5_2:60514465-60514484 Msa0779320:intron 45.0%
! GCAGGCTTCCTTGAGTTTTT+CGG - chr5_2:60514698-60514717 None:intergenic 45.0%
GAAAAACTCAAGGAAGCCTG+CGG + chr5_2:60514697-60514716 Msa0779320:CDS 45.0%
GTAATGACACAGCAGATGAG+GGG + chr5_2:60514741-60514760 Msa0779320:CDS 45.0%
TAATGACACAGCAGATGAGG+GGG + chr5_2:60514742-60514761 Msa0779320:CDS 45.0%
AGGAATGATCTTCTGCAGCA+TGG + chr5_2:60515085-60515104 Msa0779320:CDS 45.0%
GCACTTCGTGTTGAATCTCA+TGG + chr5_2:60515272-60515291 Msa0779320:intron 45.0%
! TTGTGCTGTTCTATGTGCTC+TGG + chr5_2:60515336-60515355 Msa0779320:intron 45.0%
CTTGTCATAGAACGCATCAG+AGG + chr5_2:60515768-60515787 Msa0779320:intron 45.0%
! ATGCGTCTAGAGCCTTGAAA+GGG + chr5_2:60516088-60516107 Msa0779320:intron 45.0%
!! TTTGTTGTTGTATGTGGGCC+AGG + chr5_2:60516410-60516429 Msa0779320:intron 45.0%
! TTGTTGTTGTATGTGGGCCA+GGG + chr5_2:60516411-60516430 Msa0779320:intron 45.0%
CTGATCGAACCTTGAAAGGA+AGG - chr5_2:60516473-60516492 None:intergenic 45.0%
AAGACTGCACACAGGAAATG+AGG - chr5_2:60516738-60516757 None:intergenic 45.0%
CAGGCGATTCGAAAACTCAA+TGG + chr5_2:60516890-60516909 Msa0779320:intron 45.0%
GTCGTCTCATAGCTGTTGAT+TGG + chr5_2:60516927-60516946 Msa0779320:CDS 45.0%
!! GAATTACCTTCCTCTGAAGC+AGG - chr5_2:60516995-60517014 None:intergenic 45.0%
!! GGTTGTCCATTTCTGAAGTG+TGG + chr5_2:60517611-60517630 Msa0779320:intron 45.0%
ACAACAGAGGCTATGATGCA+TGG - chr5_2:60517659-60517678 None:intergenic 45.0%
!!! GATTTTTTCGCTACAGTGGC+CGG - chr5_2:60517696-60517715 None:intergenic 45.0%
GCCACTGTAGCGAAAAAATC+AGG + chr5_2:60517696-60517715 Msa0779320:intron 45.0%
AACCAATAATTGGCGCAGTG+CGG - chr5_2:60517995-60518014 None:intergenic 45.0%
! CACTGCGCCAATTATTGGTT+TGG + chr5_2:60517995-60518014 Msa0779320:intron 45.0%
ACCAGTGTCTTATACCCATC+CGG - chr5_2:60518100-60518119 None:intergenic 45.0%
TACAGATTCGTCTTTGGCAG+AGG - chr5_2:60518695-60518714 None:intergenic 45.0%
TGCACCCTTAACAGTTTCCT+TGG - chr5_2:60518761-60518780 None:intergenic 45.0%
ACGCCTGCATTGAGTAATAG+AGG - chr5_2:60519042-60519061 None:intergenic 45.0%
TTAAGAAAACCAGTCCCTCG+TGG - chr5_2:60519065-60519084 None:intergenic 45.0%
TCAACTGCCAATACTGCTTC+TGG + chr5_2:60519119-60519138 Msa0779320:CDS 45.0%
CAACTGCCAATACTGCTTCT+GGG + chr5_2:60519120-60519139 Msa0779320:CDS 45.0%
!!! TGCTTCTGGGATGGGTATTT+TGG + chr5_2:60519133-60519152 Msa0779320:CDS 45.0%
! CAAGAAATCGGCTCATGACA+AGG + chr5_2:60519193-60519212 Msa0779320:CDS 45.0%
AGACCACCGCAATCTTTACT+TGG + chr5_2:60519244-60519263 Msa0779320:CDS 45.0%
CCTTCGCCAAGTAAAGATTG+CGG - chr5_2:60519253-60519272 None:intergenic 45.0%
GAAAGATGGCAGGAAAGGAA+AGG + chr5_2:60519936-60519955 Msa0779320:CDS 45.0%
CAAGAACATCAGTATTCCCG+TGG + chr5_2:60519964-60519983 Msa0779320:CDS 45.0%
TTCAAGAAAAGCGACTCCAC+GGG - chr5_2:60519983-60520002 None:intergenic 45.0%
AAACCTTCGGTCCTGAACAT+CGG + chr5_2:60520273-60520292 Msa0779320:CDS 45.0%
AAAGCTACAGTATCAGCAGC+GGG + chr5_2:60520349-60520368 Msa0779320:CDS 45.0%
TTTCTGTTGTTGCCGTTGTG+AGG - chr5_2:60520377-60520396 None:intergenic 45.0%
AGCGTAAACTCCTGCATTGT+CGG - chr5_2:60520414-60520433 None:intergenic 45.0%
AATGCAGGAGTTTACGCTCA+TGG + chr5_2:60520416-60520435 Msa0779320:CDS 45.0%
! CAAGGTGGTAAAGTGCCAAA+TGG + chr5_2:60520512-60520531 Msa0779320:CDS 45.0%
! CTTTTGGATTTGCCTCCTTG+AGG - chr5_2:60520545-60520564 None:intergenic 45.0%
! GGGGTTCTCTTTCTGTCTTT+TGG - chr5_2:60520561-60520580 None:intergenic 45.0%
AGAAAGTCCAAGATCGCCTT+CGG + chr5_2:60520613-60520632 Msa0779320:CDS 45.0%
GCAAAACCAAGAACAAGCAG+GGG + chr5_2:60520769-60520788 Msa0779320:CDS 45.0%
! CATTTTCCCCTGCTTGTTCT+TGG - chr5_2:60520778-60520797 None:intergenic 45.0%
GACCAAAGATTCAGTAGGGA+AGG + chr5_2:60520820-60520839 Msa0779320:CDS 45.0%
GTCCTTCCCTACTGAATCTT+TGG - chr5_2:60520825-60520844 None:intergenic 45.0%
AGATTCAGTAGGGAAGGACA+TGG + chr5_2:60520826-60520845 Msa0779320:CDS 45.0%
AGAACCCTTGTGTGAGAACT+TGG - chr5_2:60520888-60520907 None:intergenic 45.0%
TTCTCACACAAGGGTTCTCA+AGG + chr5_2:60520890-60520909 Msa0779320:CDS 45.0%
!!! TTGATTAATTTTTATTTTTT+TGG - chr5_2:60520145-60520164 None:intergenic 5.0%
CCCATTCCGAAATGTTGAGG+AGG + chr5_2:60512084-60512103 Msa0779320:CDS 50.0%
CCCTCCTCAACATTTCGGAA+TGG - chr5_2:60512088-60512107 None:intergenic 50.0%
! TGCCCTTAGGGCACTTGTTA+AGG - chr5_2:60512383-60512402 None:intergenic 50.0%
! CAATCGGGTTTGGGCTTTGT+TGG - chr5_2:60512610-60512629 None:intergenic 50.0%
TGTAGTAAAAGCCCGGATCC+GGG + chr5_2:60512628-60512647 Msa0779320:intron 50.0%
CATCTCTTCATCATCGGCGA+TGG + chr5_2:60512766-60512785 Msa0779320:CDS 50.0%
TCAGTGAGGTTGGACCTGTT+AGG + chr5_2:60512989-60513008 Msa0779320:CDS 50.0%
TCAGGCTCTACACAACATCG+TGG + chr5_2:60513141-60513160 Msa0779320:intron 50.0%
! ATCGGTGTCTGTGTTGTGTC+TGG - chr5_2:60513501-60513520 None:intergenic 50.0%
CGTTCTTCAGCTCAATGGCT+TGG - chr5_2:60514235-60514254 None:intergenic 50.0%
!! ACGGTTCATTGGTTGGTGAC+CGG + chr5_2:60514252-60514271 Msa0779320:CDS 50.0%
! GATCTTCGATTTTCACGGGG+AGG - chr5_2:60514308-60514327 None:intergenic 50.0%
AATGACACAGCAGATGAGGG+GGG + chr5_2:60514743-60514762 Msa0779320:CDS 50.0%
!! ACACACAGTGCCGATTTCTC+TGG - chr5_2:60515044-60515063 None:intergenic 50.0%
AAGAACAGCCTTCTTGCAGC+AGG - chr5_2:60515624-60515643 None:intergenic 50.0%
AGATAGGAGGGGGAACTGTT+TGG + chr5_2:60515716-60515735 Msa0779320:CDS 50.0%
GATAGGAGGGGGAACTGTTT+GGG + chr5_2:60515717-60515736 Msa0779320:CDS 50.0%
! GATGCGTCTAGAGCCTTGAA+AGG + chr5_2:60516087-60516106 Msa0779320:intron 50.0%
ATTTCTGAGTCTTGGCTCCC+TGG - chr5_2:60516431-60516450 None:intergenic 50.0%
AGGGAGCCAAGACTCAGAAA+TGG + chr5_2:60516430-60516449 Msa0779320:intron 50.0%
! AAGGGACGCGTTTTCATCTG+CGG + chr5_2:60516585-60516604 Msa0779320:CDS 50.0%
ATTCCACAGAAGTCCGACAC+AGG + chr5_2:60516628-60516647 Msa0779320:CDS 50.0%
TTCCACAGAAGTCCGACACA+GGG + chr5_2:60516629-60516648 Msa0779320:CDS 50.0%
TCCTGTGTGCAGTCTTTCGA+AGG + chr5_2:60516742-60516761 Msa0779320:intron 50.0%
CCTGTGTGCAGTCTTTCGAA+GGG + chr5_2:60516743-60516762 Msa0779320:intron 50.0%
GAATCGCCTGAAACAGCAAC+AGG - chr5_2:60516880-60516899 None:intergenic 50.0%
!! CTCTGAAGCAGGAGCATCAT+TGG - chr5_2:60516984-60517003 None:intergenic 50.0%
CAATGATGCTCCTGCTTCAG+AGG + chr5_2:60516982-60517001 Msa0779320:CDS 50.0%
GCGAGTCCACACTTCAGAAA+TGG - chr5_2:60517620-60517639 None:intergenic 50.0%
CTATGATGCATGGACAGCCA+TGG - chr5_2:60517649-60517668 None:intergenic 50.0%
AAAATCAGGACCACCTCACC+AGG + chr5_2:60517710-60517729 Msa0779320:intron 50.0%
!!! CATAGTGGGCGCTATTTTGG+TGG - chr5_2:60517962-60517981 None:intergenic 50.0%
!!! GTGCATAGTGGGCGCTATTT+TGG - chr5_2:60517965-60517984 None:intergenic 50.0%
ACCAATAATTGGCGCAGTGC+GGG - chr5_2:60517994-60518013 None:intergenic 50.0%
CCAGTGTCTTATACCCATCC+GGG - chr5_2:60518099-60518118 None:intergenic 50.0%
! TTGGTCACTTGGTGGAGAAC+AGG - chr5_2:60518961-60518980 None:intergenic 50.0%
GGACATACTTGGTCACTTGG+TGG - chr5_2:60518969-60518988 None:intergenic 50.0%
TGCATTATCAGCTGCTTCCG+CGG - chr5_2:60519096-60519115 None:intergenic 50.0%
! TGCCAATACTGCTTCTGGGA+TGG + chr5_2:60519124-60519143 Msa0779320:CDS 50.0%
!! GCCAATACTGCTTCTGGGAT+GGG + chr5_2:60519125-60519144 Msa0779320:CDS 50.0%
ACCCATCCCAGAAGCAGTAT+TGG - chr5_2:60519129-60519148 None:intergenic 50.0%
TCGCCAAGTAAAGATTGCGG+TGG - chr5_2:60519250-60519269 None:intergenic 50.0%
CCGCAATCTTTACTTGGCGA+AGG + chr5_2:60519250-60519269 Msa0779320:CDS 50.0%
GCATATCAGCTACCATAGCC+TGG - chr5_2:60519303-60519322 None:intergenic 50.0%
ATCAGTGGCTGAAACCCCTT+CGG - chr5_2:60519398-60519417 None:intergenic 50.0%
TTCAGGACCGAAGGTTTCTG+TGG - chr5_2:60520270-60520289 None:intergenic 50.0%
GCGTAAACTCCTGCATTGTC+GGG - chr5_2:60520413-60520432 None:intergenic 50.0%
AACCAAGATGGGCAGAGTCA+TGG + chr5_2:60520653-60520672 Msa0779320:CDS 50.0%
GTTGGCTAACCGTGTCATGT+TGG - chr5_2:60521025-60521044 None:intergenic 50.0%
GATTAGGTGTGTCCCGCTGT+CGG - chr5_2:60513595-60513614 None:intergenic 55.0%
AGCGGGACACACCTAATCCA+AGG + chr5_2:60513597-60513616 Msa0779320:intron 55.0%
TGATGTCATGAGGACCGAGG+AGG + chr5_2:60513944-60513963 Msa0779320:intron 55.0%
GATGTCATGAGGACCGAGGA+GGG + chr5_2:60513945-60513964 Msa0779320:intron 55.0%
CATGCTCACTCTGCATGCTG+TGG + chr5_2:60514049-60514068 Msa0779320:intron 55.0%
CACCGCCAAGCCAGAGAAAT+CGG + chr5_2:60515031-60515050 Msa0779320:CDS 55.0%
!! TGCCGATTTCTCTGGCTTGG+CGG - chr5_2:60515036-60515055 None:intergenic 55.0%
!! CAGTGCCGATTTCTCTGGCT+TGG - chr5_2:60515039-60515058 None:intergenic 55.0%
ACTGTTTGGGCACGCCAACT+TGG + chr5_2:60515730-60515749 Msa0779320:CDS 55.0%
ACTTTACCTCCCCGCCAAGT+TGG - chr5_2:60515747-60515766 None:intergenic 55.0%
! AGGGACGCGTTTTCATCTGC+GGG + chr5_2:60516586-60516605 Msa0779320:CDS 55.0%
TTTCATCTGCGGGGCCTGTA+TGG + chr5_2:60516596-60516615 Msa0779320:CDS 55.0%
TTCATCTGCGGGGCCTGTAT+GGG + chr5_2:60516597-60516616 Msa0779320:CDS 55.0%
TACCCTGTGTCGGACTTCTG+TGG - chr5_2:60516634-60516653 None:intergenic 55.0%
CCCTTCGAAAGACTGCACAC+AGG - chr5_2:60516746-60516765 None:intergenic 55.0%
GATGCTCCTGCTTCAGAGGA+AGG + chr5_2:60516986-60517005 Msa0779320:CDS 55.0%
TGTGGACTCGCCTAAGACCA+TGG + chr5_2:60517629-60517648 Msa0779320:intron 55.0%
GCATGGACAGCCATGGTCTT+AGG - chr5_2:60517642-60517661 None:intergenic 55.0%
GCGACCGCTATTGACAACAG+AGG - chr5_2:60517672-60517691 None:intergenic 55.0%
CGCGTGTCAAAGGTGGAAAG+CGG + chr5_2:60517742-60517761 Msa0779320:intron 55.0%
!!! TGGGCGCTATTTTGGTGGTG+CGG - chr5_2:60517957-60517976 None:intergenic 55.0%
TCCCGCACTGCGCCAATTAT+TGG + chr5_2:60517990-60518009 Msa0779320:intron 55.0%
GGCGCGGCCAAACCAATAAT+TGG - chr5_2:60518005-60518024 None:intergenic 55.0%
GTCAATTCGGAAATGCGGCG+CGG - chr5_2:60518026-60518045 None:intergenic 55.0%
CTAGACTGCACTACCCGGAT+GGG + chr5_2:60518083-60518102 Msa0779320:intron 55.0%
CCCGGATGGGTATAAGACAC+TGG + chr5_2:60518096-60518115 Msa0779320:intron 55.0%
TCCTCTGTACCTCGTGTTCC+AGG + chr5_2:60519282-60519301 Msa0779320:intron 55.0%
GTACCTCGTGTTCCAGGCTA+TGG + chr5_2:60519288-60519307 Msa0779320:intron 55.0%
CTACCATAGCCTGGAACACG+AGG - chr5_2:60519294-60519313 None:intergenic 55.0%
TCCTGAACATCGGCCCATTG+TGG + chr5_2:60520283-60520302 Msa0779320:CDS 55.0%
TCCACAATGGGCCGATGTTC+AGG - chr5_2:60520287-60520306 None:intergenic 55.0%
AAGTCCAAGATCGCCTTCGG+CGG + chr5_2:60520616-60520635 Msa0779320:CDS 55.0%
CACCATGACTCTGCCCATCT+TGG - chr5_2:60520658-60520677 None:intergenic 55.0%
GTGTGGGTAAACCCGGATCC+GGG - chr5_2:60512642-60512661 None:intergenic 60.0%
CGTGTGGGTAAACCCGGATC+CGG - chr5_2:60512643-60512662 None:intergenic 60.0%
CGGATCCGGGTTTACCCACA+CGG + chr5_2:60512641-60512660 Msa0779320:intron 60.0%
GGATCCGGGTTTACCCACAC+GGG + chr5_2:60512642-60512661 Msa0779320:intron 60.0%
CAATGACGCGTGTCCGACAG+CGG + chr5_2:60513579-60513598 Msa0779320:intron 60.0%
AATGACGCGTGTCCGACAGC+GGG + chr5_2:60513580-60513599 Msa0779320:intron 60.0%
! CGATTTTCACGGGGAGGACG+AGG - chr5_2:60514302-60514321 None:intergenic 60.0%
TTCCCAGGCCTGCTGCAAGA+AGG + chr5_2:60515613-60515632 Msa0779320:intron 60.0%
AGCCTTCTTGCAGCAGGCCT+GGG - chr5_2:60515618-60515637 None:intergenic 60.0%
GTTTGGGCACGCCAACTTGG+CGG + chr5_2:60515733-60515752 Msa0779320:CDS 60.0%
TTTGGGCACGCCAACTTGGC+GGG + chr5_2:60515734-60515753 Msa0779320:CDS 60.0%
! GGGACGCGTTTTCATCTGCG+GGG + chr5_2:60516587-60516606 Msa0779320:CDS 60.0%
GTTGTCAATAGCGGTCGCGC+CGG + chr5_2:60517674-60517693 Msa0779320:intron 60.0%
! ACCTTTGACACGCGCCGATG+CGG - chr5_2:60517736-60517755 None:intergenic 60.0%
TAATTGGCGCAGTGCGGGAG+CGG - chr5_2:60517989-60518008 None:intergenic 60.0%
GGCAGCTAGACTGCACTACC+CGG + chr5_2:60518078-60518097 Msa0779320:intron 60.0%
GCTAGACTGCACTACCCGGA+TGG + chr5_2:60518082-60518101 Msa0779320:intron 60.0%
ACTCAATGCAGGCGTCCACG+AGG + chr5_2:60519047-60519066 Msa0779320:intron 60.0%
CTCAATGCAGGCGTCCACGA+GGG + chr5_2:60519048-60519067 Msa0779320:intron 60.0%
GCCTGGAACACGAGGTACAG+AGG - chr5_2:60519286-60519305 None:intergenic 60.0%
ACGGAACTCCAGCTGCCGAA+GGG + chr5_2:60519380-60519399 Msa0779320:CDS 60.0%
AGTCCAAGATCGCCTTCGGC+GGG + chr5_2:60520617-60520636 Msa0779320:CDS 60.0%
! CTTTTCAGCTTGCCCGCCGA+AGG - chr5_2:60520632-60520651 None:intergenic 60.0%
GTGGCCCGTGTGGGTAAACC+CGG - chr5_2:60512649-60512668 None:intergenic 65.0%
GTTTACCCACACGGGCCACC+CGG + chr5_2:60512650-60512669 Msa0779320:intron 65.0%
GACACAGCAGATGAGGGGGG+TGG + chr5_2:60514746-60514765 Msa0779320:CDS 65.0%
CAGCCTTCTTGCAGCAGGCC+TGG - chr5_2:60515619-60515638 None:intergenic 65.0%
TTGGGCACGCCAACTTGGCG+GGG + chr5_2:60515735-60515754 Msa0779320:CDS 65.0%
ACCACCTCACCAGGCCGCAT+CGG + chr5_2:60517719-60517738 Msa0779320:intron 65.0%
! GCATCGGCGCGTGTCAAAGG+TGG + chr5_2:60517735-60517754 Msa0779320:intron 65.0%
AATTGGCGCAGTGCGGGAGC+GGG - chr5_2:60517988-60518007 None:intergenic 65.0%
GACGGAACTCCAGCTGCCGA+AGG + chr5_2:60519379-60519398 Msa0779320:CDS 65.0%
CGGAACTCCAGCTGCCGAAG+GGG + chr5_2:60519381-60519400 Msa0779320:CDS 65.0%
GCTGAAACCCCTTCGGCAGC+TGG - chr5_2:60519391-60519410 None:intergenic 65.0%
GGGCCGATGTTCAGGACCGA+AGG - chr5_2:60520279-60520298 None:intergenic 65.0%
! CAGCAGCGGGCTCCTCACAA+CGG + chr5_2:60520362-60520381 Msa0779320:CDS 65.0%
TTGCCCGCCGAAGGCGATCT+TGG - chr5_2:60520623-60520642 None:intergenic 65.0%
ATGGACCGGGTGGCCCGTGT+GGG - chr5_2:60512658-60512677 None:intergenic 70.0%
TATGGACCGGGTGGCCCGTG+TGG - chr5_2:60512659-60512678 None:intergenic 70.0%
! GCCGCATCGGCGCGTGTCAA+AGG + chr5_2:60517732-60517751 Msa0779320:intron 70.0%
GCGGGAGCGGGGTGCATAGT+GGG - chr5_2:60517976-60517995 None:intergenic 70.0%
TGCGGGAGCGGGGTGCATAG+TGG - chr5_2:60517977-60517996 None:intergenic 70.0%
ATTGGCGCAGTGCGGGAGCG+GGG - chr5_2:60517987-60518006 None:intergenic 70.0%
TTCGGAAATGCGGCGCGGCG+CGG - chr5_2:60518021-60518040 None:intergenic 70.0%
TGCAGGCGTCCACGAGGGAC+TGG + chr5_2:60519053-60519072 Msa0779320:intron 70.0%
GGCACGCCAACTTGGCGGGG+AGG + chr5_2:60515738-60515757 Msa0779320:CDS 75.0%
GCCGATGCGGCCTGGTGAGG+TGG - chr5_2:60517723-60517742 None:intergenic 75.0%
! TGACACGCGCCGATGCGGCC+TGG - chr5_2:60517731-60517750 None:intergenic 75.0%
!! CGCGCCGATGCGGCCTGGTG+AGG - chr5_2:60517726-60517745 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 60512034 60521237 60512034 ID=Msa0779320;Name=Msa0779320
chr5_2 mRNA 60512034 60521237 60512034 ID=Msa0779320-mRNA-1;Parent=Msa0779320;Name=Msa0779320-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.94|0.89|0.94|1|1|19|270|1015
chr5_2 exon 60512034 60512106 60512034 ID=Msa0779320-mRNA-1:exon:17761;Parent=Msa0779320-mRNA-1
chr5_2 exon 60512699 60512892 60512699 ID=Msa0779320-mRNA-1:exon:17762;Parent=Msa0779320-mRNA-1
chr5_2 exon 60512976 60513036 60512976 ID=Msa0779320-mRNA-1:exon:17763;Parent=Msa0779320-mRNA-1
chr5_2 exon 60513145 60513181 60513145 ID=Msa0779320-mRNA-1:exon:17764;Parent=Msa0779320-mRNA-1
chr5_2 exon 60514211 60514341 60514211 ID=Msa0779320-mRNA-1:exon:17765;Parent=Msa0779320-mRNA-1
chr5_2 exon 60514475 60514579 60514475 ID=Msa0779320-mRNA-1:exon:17766;Parent=Msa0779320-mRNA-1
chr5_2 exon 60514675 60514783 60514675 ID=Msa0779320-mRNA-1:exon:17767;Parent=Msa0779320-mRNA-1
chr5_2 exon 60514973 60515106 60514973 ID=Msa0779320-mRNA-1:exon:17768;Parent=Msa0779320-mRNA-1
chr5_2 exon 60515620 60515759 60515620 ID=Msa0779320-mRNA-1:exon:17769;Parent=Msa0779320-mRNA-1
chr5_2 exon 60516432 60516482 60516432 ID=Msa0779320-mRNA-1:exon:17770;Parent=Msa0779320-mRNA-1
chr5_2 exon 60516568 60516650 60516568 ID=Msa0779320-mRNA-1:exon:17771;Parent=Msa0779320-mRNA-1
chr5_2 exon 60516754 60516808 60516754 ID=Msa0779320-mRNA-1:exon:17772;Parent=Msa0779320-mRNA-1
chr5_2 exon 60516893 60517007 60516893 ID=Msa0779320-mRNA-1:exon:17773;Parent=Msa0779320-mRNA-1
chr5_2 exon 60518503 60518980 60518503 ID=Msa0779320-mRNA-1:exon:17774;Parent=Msa0779320-mRNA-1
chr5_2 exon 60519058 60519271 60519058 ID=Msa0779320-mRNA-1:exon:17775;Parent=Msa0779320-mRNA-1
chr5_2 exon 60519364 60519434 60519364 ID=Msa0779320-mRNA-1:exon:17776;Parent=Msa0779320-mRNA-1
chr5_2 exon 60519652 60519820 60519652 ID=Msa0779320-mRNA-1:exon:17777;Parent=Msa0779320-mRNA-1
chr5_2 exon 60519925 60520057 60519925 ID=Msa0779320-mRNA-1:exon:17778;Parent=Msa0779320-mRNA-1
chr5_2 exon 60520273 60521237 60520273 ID=Msa0779320-mRNA-1:exon:17779;Parent=Msa0779320-mRNA-1
chr5_2 CDS 60512034 60512106 60512034 ID=Msa0779320-mRNA-1:cds;Parent=Msa0779320-mRNA-1
chr5_2 CDS 60512699 60512892 60512699 ID=Msa0779320-mRNA-1:cds;Parent=Msa0779320-mRNA-1
chr5_2 CDS 60512976 60513036 60512976 ID=Msa0779320-mRNA-1:cds;Parent=Msa0779320-mRNA-1
chr5_2 CDS 60513145 60513181 60513145 ID=Msa0779320-mRNA-1:cds;Parent=Msa0779320-mRNA-1
chr5_2 CDS 60514211 60514341 60514211 ID=Msa0779320-mRNA-1:cds;Parent=Msa0779320-mRNA-1
chr5_2 CDS 60514475 60514579 60514475 ID=Msa0779320-mRNA-1:cds;Parent=Msa0779320-mRNA-1
chr5_2 CDS 60514675 60514783 60514675 ID=Msa0779320-mRNA-1:cds;Parent=Msa0779320-mRNA-1
chr5_2 CDS 60514973 60515106 60514973 ID=Msa0779320-mRNA-1:cds;Parent=Msa0779320-mRNA-1
chr5_2 CDS 60515620 60515759 60515620 ID=Msa0779320-mRNA-1:cds;Parent=Msa0779320-mRNA-1
chr5_2 CDS 60516432 60516482 60516432 ID=Msa0779320-mRNA-1:cds;Parent=Msa0779320-mRNA-1
chr5_2 CDS 60516568 60516650 60516568 ID=Msa0779320-mRNA-1:cds;Parent=Msa0779320-mRNA-1
chr5_2 CDS 60516754 60516808 60516754 ID=Msa0779320-mRNA-1:cds;Parent=Msa0779320-mRNA-1
chr5_2 CDS 60516893 60517007 60516893 ID=Msa0779320-mRNA-1:cds;Parent=Msa0779320-mRNA-1
chr5_2 CDS 60518503 60518980 60518503 ID=Msa0779320-mRNA-1:cds;Parent=Msa0779320-mRNA-1
chr5_2 CDS 60519058 60519271 60519058 ID=Msa0779320-mRNA-1:cds;Parent=Msa0779320-mRNA-1
chr5_2 CDS 60519364 60519434 60519364 ID=Msa0779320-mRNA-1:cds;Parent=Msa0779320-mRNA-1
chr5_2 CDS 60519652 60519820 60519652 ID=Msa0779320-mRNA-1:cds;Parent=Msa0779320-mRNA-1
chr5_2 CDS 60519925 60520057 60519925 ID=Msa0779320-mRNA-1:cds;Parent=Msa0779320-mRNA-1
chr5_2 CDS 60520273 60520967 60520273 ID=Msa0779320-mRNA-1:cds;Parent=Msa0779320-mRNA-1
chr5_2 three_prime_UTR 60520968 60521237 60520968 ID=Msa0779320-mRNA-1:three_prime_utr;Parent=Msa0779320-mRNA-1
Gene Sequence

>Msa0779320

ATGTTGAAAAAAGGTTTCCGGAAAATTCATAGTGTGGGGGTGAACTCATCCCCATTCCGAAATGTTGAGGAGGTAATCAGGGTTTTTCGATTCTGTTTCAAACACGCACACGCTCAAACTCTTTCTTTCGAATTCGTTTTCATCTCTTCATCATCGGCGATGGGTAAGAAAAACAAAGCAATGAAGGAAAACAGCGACGGCACTGTTAAACAATGTCCCTTAACACTCTTTGTTTCTAATTTACCCTATTCCTTCACTAACTCTCAGCTTGAACAAACTTTCAGTGAGGTTGGACCTGTTAGGCGTTGTTTCATGGTCACACAAAAGGGCTCTACACAACATCGTGGTTTCGGTTATGTTCAATTTGCTGTTGAGAATGACGCTAACCAAGCCATTGAGCTGAAGAACGGTTCATTGGTTGGTGACCGGAAAATTGTAGTGAAGCACGCAATGCCTCGTCCTCCCCGTGAAAATCGAAGATCAAAACCGGATCAAGAGGGCAATGAAGGCGATCTCACAGAATCAAAAAATGATGATAAAGACAGCGGATTATCTGGAGCAGAGAAGCCTGTTTCAGTTCCAAAAGAACCAAAGGAAGAAGAAGTGAAAGTTTTGGATAAACCGAAAAACTCAAGGAAGCCTGCGGAAATAAAAAAAGCAGCTCTTTGTAATGACACAGCAGATGAGGGGGGTGGCTCAGAAAAGCAGAAGGTTGCTAGAACTGTTATATTTGGTTGTCTTGTGAATTCTGCTATGGCTGAAGATGTTCACCGCCAAGCCAGAGAAATCGGCACTGTGTGTTCTATTAAGCATCCCCTTTCAAGGAATGATCTTCTGCAGCATGGCCTGCTGCAAGAAGGCTGTTCTTTCAATGCTTCAGCTGTACTTTATACAAGTGTAAAATCAGCTCGTGCTTCTGTTGCAACATTGCATAAAAAAGAGATAGGAGGGGGAACTGTTTGGGCACGCCAACTTGGCGGGGAGGGAGCCAAGACTCAGAAATGGAAGCTTATTGTCAGAAACCTTCCTTTCAAGGCCAAAGAAAATGAAATAAGGGACGCGTTTTCATCTGCGGGGCCTGTATGGGAAGTATTCATTCCACAGAAGTCCGACACAGGTCTTTCGAAGGGTTTTGCATTTGTAAAATTCACCTGCAAGCAAGATGCTGAAAATGCGATTCGAAAACTCAATGGATCGAAGTTTGGGAGTCGTCTCATAGCTGTTGATTGGGCTGTTCCAAAAAAGATATTTAGTAGTGATACCAATGATGCTCCTGCTTCAGAGGAAGGACAACAAAAGGTGACAGATGAAGATAGTAGTACTACTACTGAGGATGATCTTGAGAATACTGACAAAGAATCTGATCAAGGGGATGATAGTGATATTGATAGTGTTGTGGAGGAAGATGTTCCTTCTGACGATGATTTTGAAAAGGAAGCAGACATTGCAAGAAAAATTCTTAACAACTTGATTACATCCTCTGCCAAAGACGAATCTGTAAATAATGATTCCGTGTCTTCTGAAGAAAAGAACAAGCCAAAATCCAAGGAAACTGTTAAGGGTGCAGATAGTAAAACATCTAAAGAGTCCGACAAGGTTTCAGATATTTCTAAGCCTGAAACTTCCAAGGAAACAGAAGATGATTTGCACAGAACAGTTTTTATAACCAATCTTCCCTTTGAATTAGATACCGAAGAAGTGAAGCAACGGTTTTCTGCATTTGGTGAAGTAGAATATTTTGCTCCTGTTCTCCACCAAGTGACCAAGCGTCCACGAGGGACTGGTTTTCTTAAGTTTAAAACCGCGGAAGCAGCTGATAATGCAATTTCAACTGCCAATACTGCTTCTGGGATGGGTATTTTGGTAAAGGGTAGACCATTAAAGGTTTTAAAGGCTCTGGACAAGAAATCGGCTCATGACAAGGAACATGAGAAAGAAAAAAATGAAGTTCAAGACCACCGCAATCTTTACTTGGCGAAGGAGGGACTTATTCTTGACGGAACTCCAGCTGCCGAAGGGGTTTCAGCCACTGATATGTCAAAACGCAAAAATTTGGAAAGGAAAAAGAAGATGAAGCTTCAATCCCCAAATTTTCATGTTTCAAAAACTAGACTTGTTATCTACAACTTACCAAAGTCAATGAATGAAAAACAACTTAAGACGCTTTGCATTGATGCAGTCATCTCTAGAGCTACCAAGCAAACACCTGTAATTCATCAGATAAAGATTTTGAAAGATGGCAGGAAAGGAAAGGCTACTCAAGAACATCAGTATTCCCGTGGAGTCGCTTTTCTTGAATTTTCAGAGCATCAACATGCCCTTGTTGCGTTGAGAGTTCTTAACAATAATCCTGAAACCTTCGGTCCTGAACATCGGCCCATTGTGGAATTTGCTCTTGATAATATCCAGAAACTGAAACTTCGTAACGAAAAGCTACAGTATCAGCAGCGGGCTCCTCACAACGGCAACAACAGAAACGAAAATGATAAACCCGACAATGCAGGAGTTTACGCTCATGGAACTGACAGAAAACGAAAATCTCAAGAGCATGACAAACCAGCAAAAGACTTGGTACCAAATTCAAATAGCGAACAAGGTGGTAAAGTGCCAAATGGAAAATCTCCTCAAGGAGGCAAATCCAAAAGACAGAAAGAGAACCCCAAGAGTACAAATTCCGAAGTGATATCATCGAAAGAAAGTCCAAGATCGCCTTCGGCGGGCAAGCTGAAAAGTAACCAAGATGGGCAGAGTCATGGTGCTAAATTACATGAAGGTAAAAATAGTTCCATTGAAAGTAATAGGAAAATCTCAGGAAAGAAAGAAGACGCGATATTTGGAAAGAGGAAGATGCAAAACCAAGAACAAGCAGGGGAAAATGTTTCTAGGAAAAGGCCAAAGAAGACCAAAGATTCAGTAGGGAAGGACATGGTAGATAAGCTTGACATGCTTATAGAACAATATAGATCCAAGTTCTCACACAAGGGTTCTCAAGGAAATGATGGTGAGAAAAAACAATCTAAACAGCTTAGGAAATGGTTCCAATCATAA
Protein sequence

>Msa0779320

MLKKGFRKIHSVGVNSSPFRNVEEVIRVFRFCFKHAHAQTLSFEFVFISSSSAMGKKNKAMKENSDGTVKQCPLTLFVSNLPYSFTNSQLEQTFSEVGPVRRCFMVTQKGSTQHRGFGYVQFAVENDANQAIELKNGSLVGDRKIVVKHAMPRPPRENRRSKPDQEGNEGDLTESKNDDKDSGLSGAEKPVSVPKEPKEEEVKVLDKPKNSRKPAEIKKAALCNDTADEGGGSEKQKVARTVIFGCLVNSAMAEDVHRQAREIGTVCSIKHPLSRNDLLQHGLLQEGCSFNASAVLYTSVKSARASVATLHKKEIGGGTVWARQLGGEGAKTQKWKLIVRNLPFKAKENEIRDAFSSAGPVWEVFIPQKSDTGLSKGFAFVKFTCKQDAENAIRKLNGSKFGSRLIAVDWAVPKKIFSSDTNDAPASEEGQQKVTDEDSSTTTEDDLENTDKESDQGDDSDIDSVVEEDVPSDDDFEKEADIARKILNNLITSSAKDESVNNDSVSSEEKNKPKSKETVKGADSKTSKESDKVSDISKPETSKETEDDLHRTVFITNLPFELDTEEVKQRFSAFGEVEYFAPVLHQVTKRPRGTGFLKFKTAEAADNAISTANTASGMGILVKGRPLKVLKALDKKSAHDKEHEKEKNEVQDHRNLYLAKEGLILDGTPAAEGVSATDMSKRKNLERKKKMKLQSPNFHVSKTRLVIYNLPKSMNEKQLKTLCIDAVISRATKQTPVIHQIKILKDGRKGKATQEHQYSRGVAFLEFSEHQHALVALRVLNNNPETFGPEHRPIVEFALDNIQKLKLRNEKLQYQQRAPHNGNNRNENDKPDNAGVYAHGTDRKRKSQEHDKPAKDLVPNSNSEQGGKVPNGKSPQGGKSKRQKENPKSTNSEVISSKESPRSPSAGKLKSNQDGQSHGAKLHEGKNSSIESNRKISGKKEDAIFGKRKMQNQEQAGENVSRKRPKKTKDSVGKDMVDKLDMLIEQYRSKFSHKGSQGNDGEKKQSKQLRKWFQS*