Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0363300 | XP_024625718.1 | 68.046 | 1402 | 372 | 9 | 109 | 1449 | 39 | 1425 | 0.0 | 1983 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0363300 | sp|O65781|GALE2_CYATE | 75.610 | 41 | 10 | 0 | 26 | 66 | 22 | 62 | 3.91e-11 | 70.1 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0363300 | A0A2K3NLS3 | 58.815 | 1367 | 482 | 12 | 112 | 1448 | 359 | 1674 | 0.0 | 1656 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0015750 | Msa0363300 | 0.802830 | 4.658045e-49 | -8.615850e-47 |
Msa0016570 | Msa0363300 | 0.818334 | 2.068899e-52 | -8.615850e-47 |
Msa0016580 | Msa0363300 | 0.816376 | 5.709284e-52 | -8.615850e-47 |
Msa0102070 | Msa0363300 | 0.846826 | 1.701702e-59 | -8.615850e-47 |
Msa0110270 | Msa0363300 | 0.803752 | 3.000359e-49 | -8.615850e-47 |
Msa0142220 | Msa0363300 | 0.843947 | 1.024184e-58 | -8.615850e-47 |
Msa0145750 | Msa0363300 | 0.808254 | 3.390213e-50 | -8.615850e-47 |
Msa0153910 | Msa0363300 | 0.809772 | 1.604382e-50 | -8.615850e-47 |
Msa0200000 | Msa0363300 | 0.836860 | 7.304871e-57 | -8.615850e-47 |
Msa0227480 | Msa0363300 | 0.816615 | 5.048284e-52 | -8.615850e-47 |
Msa0232850 | Msa0363300 | 0.814277 | 1.671816e-51 | -8.615850e-47 |
Msa0235140 | Msa0363300 | 0.803666 | 3.126951e-49 | -8.615850e-47 |
Msa0267000 | Msa0363300 | 0.828211 | 1.019877e-54 | -8.615850e-47 |
Msa0267010 | Msa0363300 | 0.825853 | 3.736330e-54 | -8.615850e-47 |
Msa0290870 | Msa0363300 | 0.805874 | 1.081201e-49 | -8.615850e-47 |
Msa0326200 | Msa0363300 | 0.805298 | 1.428103e-49 | -8.615850e-47 |
Msa0342240 | Msa0363300 | 0.838488 | 2.791083e-57 | -8.615850e-47 |
Msa0353190 | Msa0363300 | 0.818180 | 2.242849e-52 | -8.615850e-47 |
Msa0360510 | Msa0363300 | 0.812395 | 4.333099e-51 | -8.615850e-47 |
Msa0363300 | Msa0365500 | 0.802215 | 6.235414e-49 | -8.615850e-47 |
Msa0363300 | Msa0366580 | 0.820947 | 5.240717e-53 | -8.615850e-47 |
Msa0363300 | Msa0384800 | 0.830694 | 2.542602e-55 | -8.615850e-47 |
Msa0363300 | Msa0384890 | 0.817570 | 3.078773e-52 | -8.615850e-47 |
Msa0363300 | Msa0394970 | 0.817625 | 2.993321e-52 | -8.615850e-47 |
Msa0363300 | Msa0406120 | 0.841242 | 5.349965e-58 | -8.615850e-47 |
Msa0363300 | Msa0414420 | 0.832908 | 7.225869e-56 | -8.615850e-47 |
Msa0363300 | Msa0432290 | 0.801151 | 1.030713e-48 | -8.615850e-47 |
Msa0363300 | Msa0436780 | 0.805523 | 1.280981e-49 | -8.615850e-47 |
Msa0363300 | Msa0436800 | 0.807724 | 4.394660e-50 | -8.615850e-47 |
Msa0363300 | Msa0438620 | 0.819291 | 1.254808e-52 | -8.615850e-47 |
Msa0363300 | Msa0450000 | 0.821659 | 3.588890e-53 | -8.615850e-47 |
Msa0363300 | Msa0452900 | 0.850150 | 2.045711e-60 | -8.615850e-47 |
Msa0363300 | Msa0453120 | 0.829926 | 3.915190e-55 | -8.615850e-47 |
Msa0363300 | Msa0485370 | 0.814581 | 1.432667e-51 | -8.615850e-47 |
Msa0363300 | Msa0491590 | 0.845016 | 5.280859e-59 | -8.615850e-47 |
Msa0363300 | Msa0502270 | 0.804808 | 1.808564e-49 | -8.615850e-47 |
Msa0363300 | Msa0502760 | 0.800747 | 1.246448e-48 | -8.615850e-47 |
Msa0363300 | Msa0506270 | 0.818994 | 1.465905e-52 | -8.615850e-47 |
Msa0363300 | Msa0564890 | 0.821543 | 3.818869e-53 | -8.615850e-47 |
Msa0363300 | Msa0596150 | 0.836443 | 9.329214e-57 | -8.615850e-47 |
Msa0363300 | Msa0604350 | 0.806220 | 9.141665e-50 | -8.615850e-47 |
Msa0363300 | Msa0636170 | 0.824965 | 6.063450e-54 | -8.615850e-47 |
Msa0363300 | Msa0678930 | 0.832469 | 9.287019e-56 | -8.615850e-47 |
Msa0363300 | Msa0694370 | 0.819049 | 1.424478e-52 | -8.615850e-47 |
Msa0363300 | Msa0697060 | 0.802949 | 4.401114e-49 | -8.615850e-47 |
Msa0363300 | Msa0726140 | 0.871989 | 4.487631e-67 | -8.615850e-47 |
Msa0363300 | Msa0729800 | 0.837335 | 5.524677e-57 | -8.615850e-47 |
Msa0363300 | Msa0733290 | 0.876824 | 1.026425e-68 | -8.615850e-47 |
Msa0363300 | Msa0741570 | 0.813846 | 2.081108e-51 | -8.615850e-47 |
Msa0363300 | Msa0743810 | 0.846287 | 2.387994e-59 | -8.615850e-47 |
Msa0363300 | Msa0745060 | 0.845710 | 3.427689e-59 | -8.615850e-47 |
Msa0363300 | Msa0762360 | 0.826809 | 2.212414e-54 | -8.615850e-47 |
Msa0363300 | Msa0766630 | 0.806838 | 6.772391e-50 | -8.615850e-47 |
Msa0363300 | Msa0767720 | 0.811141 | 8.121329e-51 | -8.615850e-47 |
Msa0363300 | Msa0783160 | 0.815142 | 1.075435e-51 | -8.615850e-47 |
Msa0363300 | Msa0787600 | 0.844860 | 5.821017e-59 | -8.615850e-47 |
Msa0363300 | Msa0808010 | 0.836688 | 8.079193e-57 | -8.615850e-47 |
Msa0363300 | Msa0808020 | 0.827500 | 1.511706e-54 | -8.615850e-47 |
Msa0363300 | Msa0811080 | 0.815991 | 6.961992e-52 | -8.615850e-47 |
Msa0363300 | Msa0825860 | 0.852611 | 4.119439e-61 | -8.615850e-47 |
Msa0363300 | Msa0826750 | 0.828421 | 9.074035e-55 | -8.615850e-47 |
Msa0363300 | Msa0846210 | 0.833117 | 6.412611e-56 | -8.615850e-47 |
Msa0363300 | Msa0846330 | 0.866368 | 3.001909e-65 | -8.615850e-47 |
Msa0363300 | Msa0846350 | 0.874572 | 6.083543e-68 | -8.615850e-47 |
Msa0363300 | Msa0858980 | 0.820424 | 6.908840e-53 | -8.615850e-47 |
Msa0363300 | Msa0865320 | 0.834554 | 2.803297e-56 | -8.615850e-47 |
Msa0363300 | Msa0885280 | 0.807995 | 3.848781e-50 | -8.615850e-47 |
Msa0363300 | Msa0885290 | 0.838238 | 3.238028e-57 | -8.615850e-47 |
Msa0363300 | Msa0887990 | 0.807922 | 3.988445e-50 | -8.615850e-47 |
Msa0363300 | Msa0888370 | 0.857490 | 1.575690e-62 | -8.615850e-47 |
Msa0363300 | Msa0889850 | 0.801569 | 8.465627e-49 | -8.615850e-47 |
Msa0363300 | Msa0979410 | 0.802881 | 4.546105e-49 | -8.615850e-47 |
Msa0363300 | Msa0981370 | 0.836048 | 1.175987e-56 | -8.615850e-47 |
Msa0363300 | Msa0989060 | 0.826258 | 2.994924e-54 | -8.615850e-47 |
Msa0363300 | Msa1016280 | 0.850959 | 1.211381e-60 | -8.615850e-47 |
Msa0363300 | Msa1024240 | 0.815778 | 7.767264e-52 | -8.615850e-47 |
Msa0363300 | Msa1025360 | 0.829977 | 3.805191e-55 | -8.615850e-47 |
Msa0363300 | Msa1025370 | 0.838476 | 2.811180e-57 | -8.615850e-47 |
Msa0363300 | Msa1044830 | 0.835422 | 1.693567e-56 | -8.615850e-47 |
Msa0363300 | Msa1044840 | 0.830627 | 2.639490e-55 | -8.615850e-47 |
Msa0363300 | Msa1065570 | 0.836757 | 7.759811e-57 | -8.615850e-47 |
Msa0363300 | Msa1077870 | 0.802760 | 4.815531e-49 | -8.615850e-47 |
Msa0363300 | Msa1092990 | 0.839749 | 1.315663e-57 | -8.615850e-47 |
Msa0363300 | Msa1100980 | 0.835778 | 1.376207e-56 | -8.615850e-47 |
Msa0363300 | Msa1109440 | 0.817901 | 2.592366e-52 | -8.615850e-47 |
Msa0363300 | Msa1121200 | 0.821183 | 4.623727e-53 | -8.615850e-47 |
Msa0363300 | Msa1135740 | 0.823803 | 1.137549e-53 | -8.615850e-47 |
Msa0363300 | Msa1136090 | 0.816498 | 5.360839e-52 | -8.615850e-47 |
Msa0363300 | Msa1137690 | 0.825444 | 4.671232e-54 | -8.615850e-47 |
Msa0363300 | Msa1146110 | 0.837760 | 4.298197e-57 | -8.615850e-47 |
Msa0363300 | Msa1150370 | 0.801695 | 7.975342e-49 | -8.615850e-47 |
Msa0363300 | Msa1160670 | 0.809974 | 1.451233e-50 | -8.615850e-47 |
Msa0363300 | Msa1178720 | 0.817479 | 3.227463e-52 | -8.615850e-47 |
Msa0363300 | Msa1187940 | 0.863690 | 2.079977e-64 | -8.615850e-47 |
Msa0363300 | Msa1187950 | 0.838124 | 3.465609e-57 | -8.615850e-47 |
Msa0363300 | Msa1192640 | 0.842814 | 2.055134e-58 | -8.615850e-47 |
Msa0363300 | Msa1260100 | 0.809793 | 1.587196e-50 | -8.615850e-47 |
Msa0363300 | Msa1269670 | 0.835156 | 1.976682e-56 | -8.615850e-47 |
Msa0363300 | Msa1270230 | 0.830713 | 2.514580e-55 | -8.615850e-47 |
Msa0363300 | Msa1270240 | 0.828378 | 9.292466e-55 | -8.615850e-47 |
Msa0363300 | Msa1270270 | 0.826099 | 3.267460e-54 | -8.615850e-47 |
Msa0363300 | Msa1283330 | 0.830866 | 2.306801e-55 | -8.615850e-47 |
Msa0363300 | Msa1285930 | 0.852685 | 3.925654e-61 | -8.615850e-47 |
Msa0363300 | Msa1287800 | 0.835592 | 1.534504e-56 | -8.615850e-47 |
Msa0363300 | Msa1287810 | 0.859460 | 4.074019e-63 | -8.615850e-47 |
Msa0363300 | Msa1287820 | 0.809579 | 1.765124e-50 | -8.615850e-47 |
Msa0363300 | Msa1287830 | 0.811048 | 8.506870e-51 | -8.615850e-47 |
Msa0363300 | Msa1289430 | 0.806285 | 8.860224e-50 | -8.615850e-47 |
Msa0363300 | Msa1297210 | 0.829457 | 5.093378e-55 | -8.615850e-47 |
Msa0363300 | Msa1314280 | 0.804566 | 2.030992e-49 | -8.615850e-47 |
Msa0363300 | Msa1320300 | 0.850047 | 2.186275e-60 | -8.615850e-47 |
Msa0363300 | Msa1340590 | 0.868372 | 6.855508e-66 | -8.615850e-47 |
Msa0363300 | Msa1369430 | 0.801236 | 9.905277e-49 | -8.615850e-47 |
Msa0363300 | Msa1397580 | 0.857638 | 1.423842e-62 | -8.615850e-47 |
Msa0363300 | Msa1397610 | 0.808981 | 2.370397e-50 | -8.615850e-47 |
Msa0363300 | Msa1404000 | 0.850804 | 1.339622e-60 | -8.615850e-47 |
Msa0363300 | Msa1415310 | 0.814886 | 1.226187e-51 | -8.615850e-47 |
Msa0363300 | Msa1422180 | 0.833122 | 6.393081e-56 | -8.615850e-47 |
Msa0363300 | Msa1433120 | 0.843293 | 1.531687e-58 | -8.615850e-47 |
Msa0363300 | Msa1438250 | 0.803969 | 2.705180e-49 | -8.615850e-47 |
Msa0363300 | Msa1451570 | 0.806821 | 6.827535e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0363300 | MtrunA17_Chr7g0269651 | 57.859 | 878 | 311 | 9 | 109 | 960 | 142 | 986 | 0.0 | 1058 |
Msa0363300 | MtrunA17_Chr3g0101871 | 48.746 | 917 | 447 | 5 | 228 | 1123 | 186 | 1100 | 0.0 | 916 |
Msa0363300 | MtrunA17_Chr1g0206501 | 67.470 | 498 | 156 | 1 | 909 | 1400 | 1 | 498 | 0.0 | 731 |
Msa0363300 | MtrunA17_Chr1g0173671 | 52.212 | 678 | 271 | 6 | 112 | 746 | 92 | 759 | 0.0 | 728 |
Msa0363300 | MtrunA17_Chr1g0206491 | 59.750 | 559 | 173 | 10 | 109 | 637 | 40 | 576 | 0.0 | 655 |
Msa0363300 | MtrunA17_Chr1g0173681 | 63.905 | 338 | 118 | 2 | 770 | 1104 | 2 | 338 | 4.28e-151 | 462 |
Msa0363300 | MtrunA17_Chr7g0270391 | 46.929 | 407 | 211 | 1 | 666 | 1067 | 1 | 407 | 1.34e-126 | 400 |
Msa0363300 | MtrunA17_Chr3g0101861 | 48.173 | 301 | 155 | 1 | 1150 | 1449 | 1 | 301 | 3.83e-92 | 306 |
Msa0363300 | MtrunA17_Chr3g0093501 | 50.534 | 281 | 127 | 2 | 588 | 868 | 1 | 269 | 2.08e-89 | 291 |
Msa0363300 | MtrunA17_Chr7g0269661 | 60.699 | 229 | 89 | 1 | 998 | 1226 | 1 | 228 | 9.00e-85 | 276 |
Msa0363300 | MtrunA17_Chr7g0269671 | 58.937 | 207 | 78 | 2 | 1249 | 1448 | 1 | 207 | 3.37e-73 | 248 |
Msa0363300 | MtrunA17_Chr1g0173691 | 57.005 | 207 | 83 | 1 | 1249 | 1449 | 1 | 207 | 5.63e-73 | 248 |
Msa0363300 | MtrunA17_Chr5g0400991 | 54.913 | 173 | 78 | 0 | 399 | 571 | 2 | 174 | 1.62e-60 | 205 |
Msa0363300 | MtrunA17_Chr4g0022121 | 80.000 | 85 | 17 | 0 | 1064 | 1148 | 39 | 123 | 1.79e-37 | 137 |
Msa0363300 | MtrunA17_Chr6g0472831 | 46.491 | 114 | 61 | 0 | 1321 | 1434 | 1 | 114 | 2.58e-26 | 109 |
Msa0363300 | MtrunA17_Chr3g0133361 | 44.737 | 114 | 63 | 0 | 1321 | 1434 | 1 | 114 | 2.80e-25 | 107 |
Msa0363300 | MtrunA17_Chr4g0021841 | 45.556 | 90 | 48 | 1 | 1085 | 1174 | 2 | 90 | 1.52e-18 | 82.0 |
Msa0363300 | MtrunA17_Chr5g0396581 | 92.683 | 41 | 3 | 0 | 26 | 66 | 65 | 105 | 6.39e-15 | 78.6 |
Msa0363300 | MtrunA17_Chr5g0396571 | 82.927 | 41 | 7 | 0 | 26 | 66 | 22 | 62 | 1.12e-14 | 77.4 |
Msa0363300 | MtrunA17_Chr3g0096361 | 53.125 | 64 | 30 | 0 | 1100 | 1163 | 1 | 64 | 8.58e-14 | 68.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 291 sgRNAs with CRISPR-Local
Find 471 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAATTGCTGCAACAACTTTC+TGG | 0.117713 | 3_1:-55489911 | None:intergenic |
AACTATAAAGCTACACTTAT+TGG | 0.158406 | 3_1:+55489552 | Msa0363300:CDS |
AATTCACCGTGTACGATAAA+TGG | 0.172458 | 3_1:+55490650 | Msa0363300:CDS |
TGCACCATTCAACATTAATA+TGG | 0.183886 | 3_1:-55490847 | None:intergenic |
CATCAAATACAACTCCTTTA+AGG | 0.187632 | 3_1:+55491408 | Msa0363300:CDS |
ACTGTCGACGGAACGTCTTC+TGG | 0.202438 | 3_1:-55487721 | None:intergenic |
ACTTCCTCATGCTCATATTT+TGG | 0.203652 | 3_1:+55490478 | Msa0363300:CDS |
CGAGTGACTGCTGCCTTCTA+TGG | 0.206221 | 3_1:+55490923 | Msa0363300:CDS |
AGCTACACTTATTGGGTAAA+AGG | 0.208154 | 3_1:+55489560 | Msa0363300:CDS |
CCATTAACCAGGCATCATTT+TGG | 0.218196 | 3_1:+55491482 | Msa0363300:CDS |
TACGAAGCAAGTCTCCTTAA+AGG | 0.224212 | 3_1:-55491422 | None:intergenic |
AATTGCCCCAATGGGCTTAA+TGG | 0.225168 | 3_1:-55492440 | None:intergenic |
ATCCAAGTTCAGTGGGAAAA+AGG | 0.226602 | 3_1:+55490055 | Msa0363300:CDS |
CACTTTGTGCCACCAGGGTC+TGG | 0.227921 | 3_1:+55491307 | Msa0363300:CDS |
AAATATTTACGACGCTATAA+TGG | 0.231206 | 3_1:+55492187 | Msa0363300:CDS |
AAGGAACTCGCTGCTGAATT+TGG | 0.234301 | 3_1:+55486318 | Msa0363300:CDS |
ACGCAAGAGAACAAAATTAT+TGG | 0.237314 | 3_1:+55488187 | Msa0363300:CDS |
AAGGAGACTTGCTTCGTATT+AGG | 0.247582 | 3_1:+55491427 | Msa0363300:CDS |
ATGTCTTGTCTGGTTCCTTT+AGG | 0.255168 | 3_1:-55492629 | None:intergenic |
CCAAAATGATGCCTGGTTAA+TGG | 0.267296 | 3_1:-55491482 | None:intergenic |
CGGAAATGGAATCCGCTAAA+AGG | 0.285567 | 3_1:+55487436 | Msa0363300:CDS |
AAAATTCTGCTCACCAAGTT+TGG | 0.290465 | 3_1:-55490258 | None:intergenic |
GCCCTTTACATAATTCAATA+AGG | 0.294470 | 3_1:-55491350 | None:intergenic |
GGAGGCAAGGTTGTCGTTCT+AGG | 0.295040 | 3_1:+55492575 | Msa0363300:CDS |
TGGAAATTTACCAACTATAT+CGG | 0.302260 | 3_1:-55488216 | None:intergenic |
GTAAATGTAATGAAAATATT+AGG | 0.303584 | 3_1:-55490168 | None:intergenic |
CGTCAACAATGAATGGTATA+TGG | 0.303596 | 3_1:-55492394 | None:intergenic |
CTGCATGTGAAGCTGTTTGC+AGG | 0.307679 | 3_1:+55491002 | Msa0363300:CDS |
GATGCAAAGGATCTCACTTA+TGG | 0.309099 | 3_1:+55491202 | Msa0363300:CDS |
TTCATATTATGCAAAATAGA+AGG | 0.319916 | 3_1:-55492908 | None:intergenic |
TTATCATTGTTTATCGGAAA+TGG | 0.323293 | 3_1:+55487422 | Msa0363300:CDS |
TTTATAGCGACATCAGTTCT+TGG | 0.328376 | 3_1:-55492059 | None:intergenic |
AGGCTGTTGATCGTAGTTTC+CGG | 0.329905 | 3_1:+55492525 | Msa0363300:CDS |
TCACCGCGAGAGAATATTAA+TGG | 0.330034 | 3_1:-55489751 | None:intergenic |
AGCATCAATTGTGGGTTGTA+TGG | 0.333752 | 3_1:-55490812 | None:intergenic |
ATGCAATGGCAATATGTTCT+TGG | 0.344561 | 3_1:+55490136 | Msa0363300:CDS |
TCGAGTCTTGGCGATTAAAA+TGG | 0.344597 | 3_1:+55489956 | Msa0363300:CDS |
ACTATAAAGCTACACTTATT+GGG | 0.345799 | 3_1:+55489553 | Msa0363300:CDS |
ATTCAGAATATTTCGATGTT+GGG | 0.346326 | 3_1:+55488343 | Msa0363300:intron |
TCATCATCTTCAAACATAAT+AGG | 0.348969 | 3_1:-55491097 | None:intergenic |
TGGATGAACAATTCGAAAAT+CGG | 0.350755 | 3_1:-55490513 | None:intergenic |
TCGTTCTAGGTGATGACTTT+CGG | 0.356025 | 3_1:+55492588 | Msa0363300:CDS |
CGCAATATCAATTGCCCCAA+TGG | 0.356609 | 3_1:-55492449 | None:intergenic |
TGTTAGGACAATTTGTCCTT+TGG | 0.359725 | 3_1:-55492309 | None:intergenic |
AATTCCCATTGAAATTTACT+TGG | 0.361993 | 3_1:+55491227 | Msa0363300:CDS |
GAACACACAAGATGCGTCTT+TGG | 0.362189 | 3_1:-55491624 | None:intergenic |
ACTTTGTGCCACCAGGGTCT+GGG | 0.366311 | 3_1:+55491308 | Msa0363300:CDS |
GTCCTGGAAAATATAGTCTA+AGG | 0.366485 | 3_1:+55487653 | Msa0363300:CDS |
TAACATGATCACCTGAACTA+TGG | 0.368348 | 3_1:-55492862 | None:intergenic |
GAATTTGCAGAATGGGTATT+GGG | 0.369403 | 3_1:+55492767 | Msa0363300:CDS |
TTAGGTTGATCCCCTGGTTT+AGG | 0.370037 | 3_1:-55488702 | None:intergenic |
CCATTGTCTTTATGCGTTGA+TGG | 0.370394 | 3_1:-55487592 | None:intergenic |
GCTACACTTATTGGGTAAAA+GGG | 0.371013 | 3_1:+55489561 | Msa0363300:CDS |
GGCTGTTGATCGTAGTTTCC+GGG | 0.371427 | 3_1:+55492526 | Msa0363300:CDS |
AGACGCATCTTGTGTGTTCC+AGG | 0.371664 | 3_1:+55491628 | Msa0363300:CDS |
AATGGTGTAACTATTCAAAA+AGG | 0.373577 | 3_1:+55490758 | Msa0363300:CDS |
CTGTCGACGGAACGTCTTCT+GGG | 0.375065 | 3_1:-55487720 | None:intergenic |
ATTCATTTGTTAAGTCATAT+AGG | 0.375995 | 3_1:+55489494 | Msa0363300:CDS |
TGCGTTTATTATGTCTTGTC+TGG | 0.381907 | 3_1:-55492639 | None:intergenic |
AATATTTACGACGCTATAAT+GGG | 0.383647 | 3_1:+55492188 | Msa0363300:CDS |
TAGGCAGCAAACTACCGATT+TGG | 0.385555 | 3_1:-55488683 | None:intergenic |
GTGGGAGAACTGCTCATTCC+AGG | 0.385556 | 3_1:+55492369 | Msa0363300:CDS |
TTGTCCCTTCTTCTGTAAAC+CGG | 0.387490 | 3_1:-55490737 | None:intergenic |
ACCAAGTTTGGCCTATCTGC+TGG | 0.391247 | 3_1:-55490246 | None:intergenic |
CATTTACATGCAACCACAAA+TGG | 0.394578 | 3_1:+55490184 | Msa0363300:CDS |
ATAGCAGCGCTTCTTATTCC+AGG | 0.394796 | 3_1:+55492347 | Msa0363300:CDS |
GTTAAAAGAATTTGCAGAAT+GGG | 0.396084 | 3_1:+55492760 | Msa0363300:CDS |
GAGGTAGCAGCCTTGGTTGT+AGG | 0.396690 | 3_1:+55489622 | Msa0363300:CDS |
TTTAATTTCATCGCAAGATT+CGG | 0.396699 | 3_1:-55490954 | None:intergenic |
CCAGTAGTATTGTTGCTAAC+AGG | 0.396819 | 3_1:+55493062 | Msa0363300:CDS |
GGCGTTGGTGATGGTGTTGT+TGG | 0.400882 | 3_1:+55492788 | Msa0363300:CDS |
ATTATCGTAAGTGTATTGAT+TGG | 0.402274 | 3_1:-55487746 | None:intergenic |
AAACAATGCTTGTGCATCAT+TGG | 0.403585 | 3_1:-55492500 | None:intergenic |
ACCTTATTGAATTATGTAAA+GGG | 0.405361 | 3_1:+55491349 | Msa0363300:CDS |
GTCTTGGTGACCATCTGTGT+TGG | 0.406800 | 3_1:-55491258 | None:intergenic |
CAAGTATTGTTGACGAGTTA+AGG | 0.409916 | 3_1:+55489452 | Msa0363300:CDS |
ATGCAAAGGATCTCACTTAT+GGG | 0.415415 | 3_1:+55491203 | Msa0363300:CDS |
CTATGGATAAGCAGGTCGTC+GGG | 0.415715 | 3_1:-55492845 | None:intergenic |
AGAATTTGCAGAATGGGTAT+TGG | 0.416811 | 3_1:+55492766 | Msa0363300:CDS |
GCTTTCCAAGTAAATTTCAA+TGG | 0.416843 | 3_1:-55491232 | None:intergenic |
AACCTACCATAATCATTGTC+AGG | 0.417751 | 3_1:-55488031 | None:intergenic |
ATCATTGTTGAGTGTGTGTC+AGG | 0.418698 | 3_1:+55489676 | Msa0363300:CDS |
GCACCATTCAACATTAATAT+GGG | 0.418957 | 3_1:-55490846 | None:intergenic |
ATCATTTAATTCAAGAGATA+CGG | 0.420854 | 3_1:+55490295 | Msa0363300:CDS |
TGAAGATGATGACGACTTAG+AGG | 0.422834 | 3_1:+55491108 | Msa0363300:CDS |
ATTGAACCATTAAGCCCATT+GGG | 0.424386 | 3_1:+55492434 | Msa0363300:CDS |
CACATGGTCCATGTATCATA+AGG | 0.426368 | 3_1:-55490613 | None:intergenic |
TATTCAGAATATTTCGATGT+TGG | 0.427073 | 3_1:+55488342 | Msa0363300:intron |
TTGCTTCGTATTAGGTTTGT+TGG | 0.427145 | 3_1:+55491435 | Msa0363300:CDS |
ATTATCTTGTCAATATTACT+TGG | 0.427339 | 3_1:-55490533 | None:intergenic |
CGCAATTAAACCAATCATGC+GGG | 0.427963 | 3_1:-55487982 | None:intergenic |
CAACCATCTCCGGCCATTTG+TGG | 0.428115 | 3_1:-55490197 | None:intergenic |
AATAAGTGTAGCTTTATAGT+TGG | 0.429003 | 3_1:-55489550 | None:intergenic |
GCATCAATTCATCGCGTCTC+TGG | 0.429167 | 3_1:+55492663 | Msa0363300:CDS |
TAATTTCATCATAAGAAGTT+GGG | 0.431524 | 3_1:-55491372 | None:intergenic |
ATACGGAATGGAAAGATATT+CGG | 0.433194 | 3_1:+55490312 | Msa0363300:CDS |
CTTTCCAAGTAAATTTCAAT+GGG | 0.434244 | 3_1:-55491231 | None:intergenic |
TTTAAGTATGCAACCATCTC+CGG | 0.435804 | 3_1:-55490207 | None:intergenic |
TTAATTTCATCATAAGAAGT+TGG | 0.441611 | 3_1:-55491373 | None:intergenic |
TGGGACAACGTATCTATTAT+CGG | 0.444364 | 3_1:-55490792 | None:intergenic |
TCTTGGTGACCATCTGTGTT+GGG | 0.445785 | 3_1:-55491257 | None:intergenic |
GACCTGCTTATCCATAGTTC+AGG | 0.446255 | 3_1:+55492851 | Msa0363300:CDS |
CACCTTATTGAATTATGTAA+AGG | 0.446904 | 3_1:+55491348 | Msa0363300:CDS |
CAAATATGTTCTTTCTTCAT+CGG | 0.447988 | 3_1:-55493020 | None:intergenic |
GTGTTACCCGCAAGATTTGT+CGG | 0.448148 | 3_1:+55490081 | Msa0363300:CDS |
ACTGCTGCCTTCTATGGGTC+TGG | 0.450214 | 3_1:+55490929 | Msa0363300:CDS |
CATTGAACCATTAAGCCCAT+TGG | 0.452837 | 3_1:+55492433 | Msa0363300:CDS |
ATATACAATTGTGCAAACTT+AGG | 0.454014 | 3_1:-55488720 | None:intergenic |
ATGTTCGCCTTCACTTCAAT+TGG | 0.455306 | 3_1:+55488588 | Msa0363300:CDS |
CATTAATGTGGTATGAAGAA+AGG | 0.457307 | 3_1:+55488397 | Msa0363300:CDS |
CCTGTTAGCAACAATACTAC+TGG | 0.458184 | 3_1:-55493062 | None:intergenic |
AGTTGCTGTTCATAGAGTTA+AGG | 0.458867 | 3_1:+55486299 | Msa0363300:CDS |
TTGGTTGAATCCGATATAGT+TGG | 0.459052 | 3_1:+55488206 | Msa0363300:CDS |
GCACCGCCGACAAATCTTGC+GGG | 0.459823 | 3_1:-55490087 | None:intergenic |
TGCATCAGAGGTAGCAGCCT+TGG | 0.461382 | 3_1:+55489615 | Msa0363300:CDS |
CAATGGGCTTAATGGTTCAA+TGG | 0.461563 | 3_1:-55492432 | None:intergenic |
GCAATATCAATTGCCCCAAT+GGG | 0.462160 | 3_1:-55492448 | None:intergenic |
ATTCACCGTGTACGATAAAT+GGG | 0.462619 | 3_1:+55490651 | Msa0363300:CDS |
TAAATTTCAGCATCAATTGT+GGG | 0.463524 | 3_1:-55490820 | None:intergenic |
TTATATGGGTACGGTGGTAC+AGG | 0.463896 | 3_1:+55492245 | Msa0363300:CDS |
TATGGTGTGTGAACATCATC+AGG | 0.464692 | 3_1:-55493085 | None:intergenic |
AGGATTCACTTTGTGCCACC+AGG | 0.466688 | 3_1:+55491301 | Msa0363300:CDS |
TGAAACACTATCGGATGAAT+CGG | 0.468509 | 3_1:+55487940 | Msa0363300:CDS |
GATGTCGCTATAAATAGTGC+TGG | 0.468862 | 3_1:+55492068 | Msa0363300:CDS |
GGATGAACAATTCGAAAATC+GGG | 0.469349 | 3_1:-55490512 | None:intergenic |
ATGAAAACTCAATCGTTCTT+CGG | 0.470846 | 3_1:-55491059 | None:intergenic |
TGGGTATTGGGCGTTGGTGA+TGG | 0.474020 | 3_1:+55492779 | Msa0363300:CDS |
CTGGTTCCTTTAGGAACCAC+TGG | 0.474817 | 3_1:-55492620 | None:intergenic |
GCATCAATTGTGGGTTGTAT+GGG | 0.475140 | 3_1:-55490811 | None:intergenic |
TTCCAGGACCAATTGGTTTG+AGG | 0.475150 | 3_1:-55487639 | None:intergenic |
CAACAAAGATTCATTGAAAG+AGG | 0.478063 | 3_1:+55492124 | Msa0363300:CDS |
ACAATTTGAAACCAGCAGAT+AGG | 0.481744 | 3_1:+55490235 | Msa0363300:CDS |
GGAACCGCGATATGTTTGTA+AGG | 0.483067 | 3_1:+55488365 | Msa0363300:CDS |
AAAGCACCTTATGAAAATTG+AGG | 0.484142 | 3_1:-55486347 | None:intergenic |
ATTAATGTGGTATGAAGAAA+GGG | 0.485074 | 3_1:+55488398 | Msa0363300:CDS |
TATTGATGCTGACGGTTACC+CGG | 0.486173 | 3_1:+55490718 | Msa0363300:CDS |
ACCAGCAGATAGGCCAAACT+TGG | 0.487475 | 3_1:+55490245 | Msa0363300:CDS |
AAAGTAGGCCTCAAACCAAT+TGG | 0.490108 | 3_1:+55487631 | Msa0363300:CDS |
GGCCTCAAACCAATTGGTCC+TGG | 0.490254 | 3_1:+55487637 | Msa0363300:CDS |
AAACATTCGTCAACAATGAA+TGG | 0.491708 | 3_1:-55492401 | None:intergenic |
ATGCAGCACATAGAAAATTC+TGG | 0.492729 | 3_1:-55488447 | None:intergenic |
ATGCCCATATTAATGTTGAA+TGG | 0.494560 | 3_1:+55490843 | Msa0363300:CDS |
GTTACCCGGTTTACAGAAGA+AGG | 0.494778 | 3_1:+55490732 | Msa0363300:CDS |
GCAAACTTAGGTTGATCCCC+TGG | 0.495421 | 3_1:-55488708 | None:intergenic |
CATCAGAAGGCAAGACTGCC+AGG | 0.495430 | 3_1:+55485731 | Msa0363300:CDS |
CTATGTGCTGCATGCAAGGA+AGG | 0.495549 | 3_1:+55488457 | Msa0363300:CDS |
GATGTTCCTGACAATGATTA+TGG | 0.495982 | 3_1:+55488025 | Msa0363300:CDS |
GGAGAAAATTACCACCAAAT+CGG | 0.496564 | 3_1:+55488669 | Msa0363300:CDS |
CTTTGTGCCACCAGGGTCTG+GGG | 0.496643 | 3_1:+55491309 | Msa0363300:CDS |
TTCGGCACCAGACCCATAGA+AGG | 0.496715 | 3_1:-55490936 | None:intergenic |
TGCGTACAAATTGCAACAAA+GGG | 0.498438 | 3_1:+55489861 | Msa0363300:CDS |
AGTAGTGTGGTCTAAAACAT+GGG | 0.500293 | 3_1:+55491573 | Msa0363300:CDS |
TACCACTTGACGCCACTGTT+AGG | 0.500493 | 3_1:-55492325 | None:intergenic |
GTCTCATCCCTTATGATACA+TGG | 0.500691 | 3_1:+55490605 | Msa0363300:CDS |
GAGTGACTGCTGCCTTCTAT+GGG | 0.502104 | 3_1:+55490924 | Msa0363300:CDS |
TTTACTCGGCGGTTTCAAAA+CGG | 0.504395 | 3_1:+55486245 | Msa0363300:CDS |
CACCTGAACTATGGATAAGC+AGG | 0.508232 | 3_1:-55492853 | None:intergenic |
CTTTAAAGTACAACTCATGA+AGG | 0.509587 | 3_1:-55488515 | None:intergenic |
ACCGTGCAAAAGTCTCATAT+TGG | 0.511284 | 3_1:-55492714 | None:intergenic |
ATGATCTACATGACCATGGC+TGG | 0.511421 | 3_1:+55485679 | None:intergenic |
ACATGGTCCATGTATCATAA+GGG | 0.512793 | 3_1:-55490612 | None:intergenic |
CAACAAAGGGTCGATGATCA+AGG | 0.512872 | 3_1:+55489874 | Msa0363300:CDS |
CACAGAAGGCGTGGAGGTGA+TGG | 0.513279 | 3_1:+55488133 | Msa0363300:intron |
ACGATGCAGCGGATTTCGAA+AGG | 0.513352 | 3_1:+55489650 | Msa0363300:CDS |
CTGTTAGCAACAATACTACT+GGG | 0.513490 | 3_1:-55493061 | None:intergenic |
CGCTATAATGGGCAGAGTTG+AGG | 0.513510 | 3_1:+55492199 | Msa0363300:CDS |
ATATTCTCTCGCGGTGAAGA+CGG | 0.515793 | 3_1:+55489757 | Msa0363300:CDS |
GAATCAAAATTACATACCGT+TGG | 0.518650 | 3_1:-55487466 | None:intergenic |
GGTAGTTTGCTGCCTAAACC+AGG | 0.519639 | 3_1:+55488690 | Msa0363300:CDS |
TTAAATTTCAGCATCAATTG+TGG | 0.520746 | 3_1:-55490821 | None:intergenic |
ATTTGTTAAGTCATATAGGT+TGG | 0.523007 | 3_1:+55489498 | Msa0363300:CDS |
TTCAGAATATTTCGATGTTG+GGG | 0.523920 | 3_1:+55488344 | Msa0363300:intron |
ATTCTACCAGTGGTTCCTAA+AGG | 0.523938 | 3_1:+55492614 | Msa0363300:CDS |
GATTGAGGTAGGCGGGCGAA+TGG | 0.525861 | 3_1:-55488492 | None:intergenic |
ACTTTACCGTTAGATAAAGT+AGG | 0.526943 | 3_1:+55487616 | Msa0363300:CDS |
AGTTAAAAGAATTTGCAGAA+TGG | 0.529447 | 3_1:+55492759 | Msa0363300:CDS |
CGGTTCCCCAAAATGATGCC+TGG | 0.532174 | 3_1:-55491489 | None:intergenic |
TGAGACAATATTGTAGAGCT+CGG | 0.532339 | 3_1:-55490588 | None:intergenic |
GATTTAGCATGATCGAGTCT+TGG | 0.532940 | 3_1:+55489944 | Msa0363300:CDS |
ACTGATACACCTCTTTGTCT+TGG | 0.533203 | 3_1:-55491274 | None:intergenic |
ATGGCAATATGTTCTTGGAT+TGG | 0.533207 | 3_1:+55490141 | Msa0363300:CDS |
TGCAAAGCAGACATTCCATT+CGG | 0.535989 | 3_1:+55492554 | Msa0363300:CDS |
CATTGAAAGAGGAGCATGAT+CGG | 0.537151 | 3_1:+55492135 | Msa0363300:CDS |
AGGCAGCAGTCACTCGGTCG+TGG | 0.537157 | 3_1:-55490916 | None:intergenic |
TACAACTCATGAAGGGATTG+AGG | 0.538566 | 3_1:-55488507 | None:intergenic |
ATGAAGGGATTGAGGTAGGC+GGG | 0.539866 | 3_1:-55488499 | None:intergenic |
GAGACAATATTGTAGAGCTC+GGG | 0.540168 | 3_1:-55490587 | None:intergenic |
CAACCACAAATGGCCGGAGA+TGG | 0.542312 | 3_1:+55490194 | Msa0363300:CDS |
TTAATTCAAGAGATACGGAA+TGG | 0.542389 | 3_1:+55490300 | Msa0363300:CDS |
GTTTATTGATGCCATTAACC+AGG | 0.546453 | 3_1:+55491471 | Msa0363300:CDS |
CATAGAAGGCAGCAGTCACT+CGG | 0.546457 | 3_1:-55490922 | None:intergenic |
CTTTGCACCAATTGAAGTGA+AGG | 0.549187 | 3_1:-55488595 | None:intergenic |
CAATACACTTACGATAATGA+AGG | 0.553963 | 3_1:+55487751 | Msa0363300:CDS |
GCAGCAAACTACCGATTTGG+TGG | 0.554019 | 3_1:-55488680 | None:intergenic |
TTGCGTACAAATTGCAACAA+AGG | 0.555756 | 3_1:+55489860 | Msa0363300:CDS |
TGTCCCTTCTTCTGTAAACC+GGG | 0.555849 | 3_1:-55490736 | None:intergenic |
TTAATGGATATTGTAGTGCC+AGG | 0.556394 | 3_1:-55489735 | None:intergenic |
AGACATTCCATTCGGAGGCA+AGG | 0.558018 | 3_1:+55492562 | Msa0363300:CDS |
CGATGCAGCGGATTTCGAAA+GGG | 0.558376 | 3_1:+55489651 | Msa0363300:CDS |
GAATGAGCAGTTCTCCCACC+TGG | 0.558929 | 3_1:-55492365 | None:intergenic |
GTTGGAGACGCATGTGATGA+TGG | 0.563137 | 3_1:+55492806 | Msa0363300:CDS |
TGTTAGAGCTGATATGTACA+AGG | 0.565157 | 3_1:+55489999 | Msa0363300:CDS |
AAAATATAGTCTAAGGCATG+TGG | 0.566278 | 3_1:+55487660 | Msa0363300:CDS |
AATGAATGGTATATGGAACC+TGG | 0.566866 | 3_1:-55492387 | None:intergenic |
AAACTCAATCGTTCTTCGGA+AGG | 0.567116 | 3_1:-55491055 | None:intergenic |
CACTTCCCATTTATCGTACA+CGG | 0.569074 | 3_1:-55490656 | None:intergenic |
TTCTTGGCATAGACGGATAG+TGG | 0.569244 | 3_1:-55492043 | None:intergenic |
TTGAGGCCTACTTTATCTAA+CGG | 0.569291 | 3_1:-55487622 | None:intergenic |
TAAAATTTCTCCCCAGACCC+TGG | 0.570893 | 3_1:-55491319 | None:intergenic |
TTTGTTCAAGTACGTTAACA+AGG | 0.574322 | 3_1:+55490892 | Msa0363300:CDS |
GCTAAAAGGCGCAAAACCAA+CGG | 0.578095 | 3_1:+55487450 | Msa0363300:CDS |
CAAGATATATGCCGATGCAA+AGG | 0.578545 | 3_1:+55491189 | Msa0363300:CDS |
AAGTAGTGTGGTCTAAAACA+TGG | 0.580082 | 3_1:+55491572 | Msa0363300:CDS |
ACTATGGATAAGCAGGTCGT+CGG | 0.581735 | 3_1:-55492846 | None:intergenic |
GTAACCGTCAGCATCAATAA+CGG | 0.582214 | 3_1:-55490714 | None:intergenic |
TCAAAATTATCAAGATGCAA+TGG | 0.582513 | 3_1:+55490122 | Msa0363300:CDS |
ACGACAACCTTGCCTCCGAA+TGG | 0.582860 | 3_1:-55492569 | None:intergenic |
GCAGAATGGGTATTGGGCGT+TGG | 0.583408 | 3_1:+55492773 | Msa0363300:CDS |
AGACAAAGAGGTGTATCAGT+TGG | 0.586490 | 3_1:+55491277 | Msa0363300:CDS |
GCGTCTCTGGCGTCATTGTG+AGG | 0.587235 | 3_1:+55492676 | Msa0363300:CDS |
TCATATTATGCAAAATAGAA+GGG | 0.587518 | 3_1:-55492907 | None:intergenic |
TACATGCAACCACAAATGGC+CGG | 0.588331 | 3_1:+55490188 | Msa0363300:CDS |
CTACACTTATTGGGTAAAAG+GGG | 0.592468 | 3_1:+55489562 | Msa0363300:CDS |
TCATCTGCATTGAGATCCAA+AGG | 0.592661 | 3_1:+55492293 | Msa0363300:CDS |
CGAGAACAATCCAAGTTCAG+TGG | 0.592900 | 3_1:+55490047 | Msa0363300:CDS |
AAGCGATAGTGAAACACTAT+CGG | 0.593862 | 3_1:+55487931 | Msa0363300:CDS |
TTTAAAGTACAACTCATGAA+GGG | 0.595122 | 3_1:-55488514 | None:intergenic |
GTCCTAACAGTGGCGTCAAG+TGG | 0.595498 | 3_1:+55492323 | Msa0363300:CDS |
CTTTCGGCAAATTCTACCAG+TGG | 0.596038 | 3_1:+55492604 | Msa0363300:CDS |
TAATGCACCAACTGCATCAG+AGG | 0.596608 | 3_1:+55489603 | Msa0363300:CDS |
AAAGAGGTGTATCAGTTGGA+AGG | 0.598040 | 3_1:+55491281 | Msa0363300:CDS |
GCTGCTACCTCTGATGCAGT+TGG | 0.599510 | 3_1:-55489610 | None:intergenic |
GGCAAGATATATACCAGCCA+TGG | 0.599549 | 3_1:-55485692 | None:intergenic |
ATGTCGCTATAAATAGTGCT+GGG | 0.601450 | 3_1:+55492069 | Msa0363300:CDS |
TGCTTACAAATCAATTTGCG+CGG | 0.602367 | 3_1:+55491545 | Msa0363300:CDS |
AAATATAGTCTAAGGCATGT+GGG | 0.602830 | 3_1:+55487661 | Msa0363300:CDS |
CAATTCGAAAATCGGGATGG+AGG | 0.603717 | 3_1:-55490505 | None:intergenic |
GAGAACAATCCAAGTTCAGT+GGG | 0.609968 | 3_1:+55490048 | Msa0363300:CDS |
GGAAAGCATCCCAACACAGA+TGG | 0.611180 | 3_1:+55491248 | Msa0363300:CDS |
ACTATCGGATGAATCGGATG+TGG | 0.611682 | 3_1:+55487946 | Msa0363300:CDS |
ATCGTAATCACCTACAACCA+AGG | 0.611870 | 3_1:-55489632 | None:intergenic |
ATATTCGGCAAAGTCAAAGC+AGG | 0.612722 | 3_1:+55490327 | Msa0363300:CDS |
TGTGCTGAAATTCCTGACAA+AGG | 0.615135 | 3_1:+55490557 | Msa0363300:CDS |
CCATCAACGCATAAAGACAA+TGG | 0.615702 | 3_1:+55487592 | Msa0363300:CDS |
AACACCAAAATATGAGCATG+AGG | 0.617891 | 3_1:-55490482 | None:intergenic |
ACATCAGTTCTTGGCATAGA+CGG | 0.618006 | 3_1:-55492050 | None:intergenic |
TGTCTGCTTTGCATACATCC+CGG | 0.618314 | 3_1:-55492544 | None:intergenic |
ACTCATGAAGGGATTGAGGT+AGG | 0.618986 | 3_1:-55488503 | None:intergenic |
TGCACCGCCGACAAATCTTG+CGG | 0.622234 | 3_1:-55490088 | None:intergenic |
CAGCGCTTCTTATTCCAGGT+GGG | 0.623881 | 3_1:+55492351 | Msa0363300:CDS |
TTTGTGTGCCACAGAAGGCG+TGG | 0.625119 | 3_1:+55488124 | Msa0363300:intron |
GCAGCGCTTCTTATTCCAGG+TGG | 0.626528 | 3_1:+55492350 | Msa0363300:CDS |
CAATTAAACCAATCATGCGG+GGG | 0.628888 | 3_1:-55487980 | None:intergenic |
AGGATTGCAACGCATTAATG+TGG | 0.630790 | 3_1:+55488385 | Msa0363300:CDS |
TTGTTCAAGTACGTTAACAA+GGG | 0.631888 | 3_1:+55490893 | Msa0363300:CDS |
AGAGTTGAGGCAAATAAACA+AGG | 0.635203 | 3_1:+55492212 | Msa0363300:CDS |
GGATTCACTTTGTGCCACCA+GGG | 0.635455 | 3_1:+55491302 | Msa0363300:CDS |
GCGCAATTAAACCAATCATG+CGG | 0.636527 | 3_1:-55487983 | None:intergenic |
TAATCTTCTCATAAAATCAG+CGG | 0.637807 | 3_1:-55491509 | None:intergenic |
TGCAAAGGATCTCACTTATG+GGG | 0.637939 | 3_1:+55491204 | Msa0363300:CDS |
TGTAGGTGATTACGATGCAG+CGG | 0.638628 | 3_1:+55489639 | Msa0363300:CDS |
GTAGTTTGCTGCCTAAACCA+GGG | 0.642560 | 3_1:+55488691 | Msa0363300:CDS |
ATAAGTGAGATCCTTTGCAT+CGG | 0.645503 | 3_1:-55491200 | None:intergenic |
AGATGGTCACCAAGACAAAG+AGG | 0.646038 | 3_1:+55491265 | Msa0363300:CDS |
TAGTTTGCTGCCTAAACCAG+GGG | 0.652223 | 3_1:+55488692 | Msa0363300:CDS |
GAACAATTCGAAAATCGGGA+TGG | 0.652657 | 3_1:-55490508 | None:intergenic |
GCAATTAAACCAATCATGCG+GGG | 0.656991 | 3_1:-55487981 | None:intergenic |
CAATCCTTACAAACATATCG+CGG | 0.661003 | 3_1:-55488369 | None:intergenic |
TTACCCGGTTTACAGAAGAA+GGG | 0.661564 | 3_1:+55490733 | Msa0363300:CDS |
CATGTGGGAAATCAAAGTAG+TGG | 0.662621 | 3_1:+55487676 | Msa0363300:CDS |
TTGAACCATTAAGCCCATTG+GGG | 0.663700 | 3_1:+55492435 | Msa0363300:CDS |
AAAGCAGACATTCCATTCGG+AGG | 0.668010 | 3_1:+55492557 | Msa0363300:CDS |
AGCACCGTTATTGATGCTGA+CGG | 0.670089 | 3_1:+55490710 | Msa0363300:CDS |
CATGAAGGGATTGAGGTAGG+CGG | 0.670541 | 3_1:-55488500 | None:intergenic |
GTTAGAGCTGATATGTACAA+GGG | 0.673299 | 3_1:+55490000 | Msa0363300:CDS |
TATGGATAAGCAGGTCGTCG+GGG | 0.679209 | 3_1:-55492844 | None:intergenic |
GTACAAGGGATTATATGAAG+CGG | 0.680577 | 3_1:+55490014 | Msa0363300:CDS |
TTGCGCGGCCAGAAGTAGTG+TGG | 0.682833 | 3_1:+55491560 | Msa0363300:CDS |
GTAAAAGGGGATACGATGGT+CGG | 0.685345 | 3_1:+55489575 | Msa0363300:CDS |
GCAACAATACTACTGGGGCA+AGG | 0.686780 | 3_1:-55493055 | None:intergenic |
GTTTACAGAAGAAGGGACAA+TGG | 0.687862 | 3_1:+55490740 | Msa0363300:CDS |
TTGGGTAAAAGGGGATACGA+TGG | 0.688031 | 3_1:+55489571 | Msa0363300:CDS |
AGGACAAATTGTCCTAACAG+TGG | 0.702943 | 3_1:+55492313 | Msa0363300:CDS |
GAAAAGCTACAACAGTCCCA+CGG | 0.704816 | 3_1:+55492005 | Msa0363300:CDS |
TATCCATTAATATTCTCTCG+CGG | 0.706728 | 3_1:+55489748 | Msa0363300:CDS |
AATTTCTCCCCAGACCCTGG+TGG | 0.720594 | 3_1:-55491316 | None:intergenic |
TTACCCGCAAGATTTGTCGG+CGG | 0.728638 | 3_1:+55490084 | Msa0363300:CDS |
TATTGATTGGAAACTGTCGA+CGG | 0.736783 | 3_1:-55487733 | None:intergenic |
TGTTAGCAACAATACTACTG+GGG | 0.736812 | 3_1:-55493060 | None:intergenic |
CTTATGATACATGGACCATG+TGG | 0.749107 | 3_1:+55490614 | Msa0363300:CDS |
GTGTGCCACAGAAGGCGTGG+AGG | 0.749358 | 3_1:+55488127 | Msa0363300:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATAATATTTTTTTTTGGAAT+AGG | + | chr3_1:55486604-55486623 | Msa0363300:intron | 10.0% |
!!! | TTTGTAAATTTTTTCATTAT+AGG | - | chr3_1:55487814-55487833 | None:intergenic | 10.0% |
!!! | TAGTTTTTTTTTAAATTGAT+TGG | + | chr3_1:55488274-55488293 | Msa0363300:intron | 10.0% |
!!! | TTTTTTTATCATTTTCATTA+GGG | - | chr3_1:55489203-55489222 | None:intergenic | 10.0% |
!!! | TTTTTTTTATCATTTTCATT+AGG | - | chr3_1:55489204-55489223 | None:intergenic | 10.0% |
!!! | AAGGTTTATTTTTTTTATAT+GGG | + | chr3_1:55492231-55492250 | Msa0363300:CDS | 10.0% |
!! | AATCCAATTAATCAAAATAA+TGG | + | chr3_1:55485835-55485854 | Msa0363300:intron | 15.0% |
!!! | ATTGATATTTTTCTGAATTT+AGG | + | chr3_1:55486463-55486482 | Msa0363300:intron | 15.0% |
!!! | TCCTTGATAATATTTTTTTT+TGG | + | chr3_1:55486598-55486617 | Msa0363300:intron | 15.0% |
!! | TCCAAAAAAAAATATTATCA+AGG | - | chr3_1:55486602-55486621 | None:intergenic | 15.0% |
!!! | ATTTTATGTAAATTGTTTAG+AGG | + | chr3_1:55486862-55486881 | Msa0363300:intron | 15.0% |
!!! | TTTTATGTAAATTGTTTAGA+GGG | + | chr3_1:55486863-55486882 | Msa0363300:intron | 15.0% |
!!! | ATGTTGTTCTTTTAAATTTT+TGG | + | chr3_1:55486978-55486997 | Msa0363300:intron | 15.0% |
!!! | TGTTTTTTATCATTGTTTAT+CGG | + | chr3_1:55487416-55487435 | Msa0363300:CDS | 15.0% |
!!! | AGTTTTTATTACTATAAAAG+TGG | + | chr3_1:55487520-55487539 | Msa0363300:intron | 15.0% |
!! | AATAATAAATTTGAGAGAAT+CGG | - | chr3_1:55488252-55488271 | None:intergenic | 15.0% |
!! | TAATTTAGTTACTAAATCAT+TGG | + | chr3_1:55488822-55488841 | Msa0363300:intron | 15.0% |
!!! | ATATTTTTCTTATAGTGAAA+AGG | - | chr3_1:55488921-55488940 | None:intergenic | 15.0% |
!!! | TATTATGTTTATTTTGATGT+AGG | + | chr3_1:55489401-55489420 | Msa0363300:intron | 15.0% |
!! | GTAAATGTAATGAAAATATT+AGG | - | chr3_1:55490171-55490190 | None:intergenic | 15.0% |
!! | ACAAAATAGTAAATCTAATA+TGG | - | chr3_1:55490380-55490399 | None:intergenic | 15.0% |
!!! | TGCTATTTATATAATGAATA+CGG | + | chr3_1:55491815-55491834 | Msa0363300:intron | 15.0% |
!!! | CAAGGTTTATTTTTTTTATA+TGG | + | chr3_1:55492230-55492249 | Msa0363300:CDS | 15.0% |
!!! | TTATTTTTTTTATATGGGTA+CGG | + | chr3_1:55492236-55492255 | Msa0363300:CDS | 15.0% |
!!! | ATGCCATTATTTTGATTAAT+TGG | - | chr3_1:55485841-55485860 | None:intergenic | 20.0% |
!! | TCAAAATAATGGCATTTAAT+TGG | + | chr3_1:55485846-55485865 | Msa0363300:intron | 20.0% |
!! | ATTTAATTGGTATACATGAT+GGG | + | chr3_1:55485859-55485878 | Msa0363300:intron | 20.0% |
!!! | TAGTCTATAAGATTTTTATG+TGG | - | chr3_1:55486093-55486112 | None:intergenic | 20.0% |
!! | ATGTATAGAATCAAACAAAA+AGG | - | chr3_1:55486144-55486163 | None:intergenic | 20.0% |
!!! | AAATAACCTCAATTTTCATA+AGG | + | chr3_1:55486341-55486360 | Msa0363300:CDS | 20.0% |
!!! | TTTTTTTGCTCAATTTTGAT+TGG | + | chr3_1:55486387-55486406 | Msa0363300:intron | 20.0% |
!! | AAGAATTGCAAAAATACAAA+CGG | - | chr3_1:55486506-55486525 | None:intergenic | 20.0% |
!!! | ATTTCTGTAATTTTTTGTGA+TGG | + | chr3_1:55486536-55486555 | Msa0363300:intron | 20.0% |
!! | TTTATGTAAATTGTTTAGAG+GGG | + | chr3_1:55486864-55486883 | Msa0363300:intron | 20.0% |
!! | TTATATATTAGCATCATCTA+TGG | - | chr3_1:55487104-55487123 | None:intergenic | 20.0% |
!!! | GAATAATTTTGAATGAACAT+TGG | - | chr3_1:55487188-55487207 | None:intergenic | 20.0% |
!!! | TTTTAAAAACAGGACATTAA+AGG | - | chr3_1:55487838-55487857 | None:intergenic | 20.0% |
!!! | AGACAATATCTTTTAAAAAC+AGG | - | chr3_1:55487848-55487867 | None:intergenic | 20.0% |
!! | TCACAAAATTTAACAAAACA+GGG | - | chr3_1:55487871-55487890 | None:intergenic | 20.0% |
!! | TTCACAAAATTTAACAAAAC+AGG | - | chr3_1:55487872-55487891 | None:intergenic | 20.0% |
!!! | TTCTCATTTTTTTTTCCTTT+AGG | + | chr3_1:55487893-55487912 | Msa0363300:intron | 20.0% |
!! | GAAATATTCTGAATAATCAA+GGG | - | chr3_1:55488337-55488356 | None:intergenic | 20.0% |
!!! | TAGAAAGAGCAAATATTTTT+TGG | + | chr3_1:55488542-55488561 | Msa0363300:CDS | 20.0% |
!!! | TTTGAAAAAATGTTCTAGAT+TGG | - | chr3_1:55489028-55489047 | None:intergenic | 20.0% |
!!! | TTTTGACATCATTATCAAAA+AGG | + | chr3_1:55489107-55489126 | Msa0363300:intron | 20.0% |
!! | ATATTAAACTCGATCTATAT+TGG | - | chr3_1:55489150-55489169 | None:intergenic | 20.0% |
!!! | ATTCATTTGTTAAGTCATAT+AGG | + | chr3_1:55489494-55489513 | Msa0363300:CDS | 20.0% |
!! | ATCATTTAATTCAAGAGATA+CGG | + | chr3_1:55490295-55490314 | Msa0363300:CDS | 20.0% |
!!! | TATTTTGTGTATGTCATTAA+TGG | + | chr3_1:55490392-55490411 | Msa0363300:intron | 20.0% |
!!! | ATTTTGTGTATGTCATTAAT+GGG | + | chr3_1:55490393-55490412 | Msa0363300:intron | 20.0% |
!! | GCATGATATTAAAATAACAA+TGG | - | chr3_1:55490425-55490444 | None:intergenic | 20.0% |
!! | ATTATCTTGTCAATATTACT+TGG | - | chr3_1:55490536-55490555 | None:intergenic | 20.0% |
!! | ACCTTATTGAATTATGTAAA+GGG | + | chr3_1:55491349-55491368 | Msa0363300:CDS | 20.0% |
!! | TAATTTCATCATAAGAAGTT+GGG | - | chr3_1:55491375-55491394 | None:intergenic | 20.0% |
!! | TTAATTTCATCATAAGAAGT+TGG | - | chr3_1:55491376-55491395 | None:intergenic | 20.0% |
!! | ACAATACAATTCTTATATCA+TGG | - | chr3_1:55491743-55491762 | None:intergenic | 20.0% |
!!! | GTAAATATTTTTTTGTTCAG+TGG | - | chr3_1:55492177-55492196 | None:intergenic | 20.0% |
!! | TCATATTATGCAAAATAGAA+GGG | - | chr3_1:55492910-55492929 | None:intergenic | 20.0% |
!! | TTCATATTATGCAAAATAGA+AGG | - | chr3_1:55492911-55492930 | None:intergenic | 20.0% |
! | CATTTAATTGGTATACATGA+TGG | + | chr3_1:55485858-55485877 | Msa0363300:intron | 25.0% |
! | TTTAATTGGTATACATGATG+GGG | + | chr3_1:55485860-55485879 | Msa0363300:intron | 25.0% |
!! | TTCATTTTATGACAGTTGAA+AGG | - | chr3_1:55485893-55485912 | None:intergenic | 25.0% |
!! | AAAATTCTTCAGCTTTTACT+CGG | + | chr3_1:55486231-55486250 | Msa0363300:intron | 25.0% |
!!! | GAAGTAATCTATATTTTGGA+GGG | - | chr3_1:55487004-55487023 | None:intergenic | 25.0% |
!!! | AGAAGTAATCTATATTTTGG+AGG | - | chr3_1:55487005-55487024 | None:intergenic | 25.0% |
! | TCCAAAATATAGATTACTTC+TGG | + | chr3_1:55487004-55487023 | Msa0363300:intron | 25.0% |
!! | ACCAGAAGTAATCTATATTT+TGG | - | chr3_1:55487008-55487027 | None:intergenic | 25.0% |
! | TTATCATTGTTTATCGGAAA+TGG | + | chr3_1:55487422-55487441 | Msa0363300:CDS | 25.0% |
! | ACATTAAACAACATTGATCA+AGG | - | chr3_1:55487562-55487581 | None:intergenic | 25.0% |
!! | ATTATCGTAAGTGTATTGAT+TGG | - | chr3_1:55487749-55487768 | None:intergenic | 25.0% |
! | TGGAAATTTACCAACTATAT+CGG | - | chr3_1:55488219-55488238 | None:intergenic | 25.0% |
! | CGAAATATTCTGAATAATCA+AGG | - | chr3_1:55488338-55488357 | None:intergenic | 25.0% |
! | TATTCAGAATATTTCGATGT+TGG | + | chr3_1:55488342-55488361 | Msa0363300:intron | 25.0% |
! | ATTCAGAATATTTCGATGTT+GGG | + | chr3_1:55488343-55488362 | Msa0363300:intron | 25.0% |
! | ATTAATGTGGTATGAAGAAA+GGG | + | chr3_1:55488398-55488417 | Msa0363300:CDS | 25.0% |
! | AAGAAAGGGAAAATAAAAAC+AGG | + | chr3_1:55488412-55488431 | Msa0363300:CDS | 25.0% |
!! | TTTAAAGTACAACTCATGAA+GGG | - | chr3_1:55488517-55488536 | None:intergenic | 25.0% |
! | ATATACAATTGTGCAAACTT+AGG | - | chr3_1:55488723-55488742 | None:intergenic | 25.0% |
!! | TATGATACTGATAACGAAAT+CGG | + | chr3_1:55488744-55488763 | Msa0363300:intron | 25.0% |
! | GAAATAAGAAAATTACCTCA+CGG | - | chr3_1:55488777-55488796 | None:intergenic | 25.0% |
! | CAAAATAAAATTTATGCGCT+TGG | - | chr3_1:55489092-55489111 | None:intergenic | 25.0% |
! | TAGAGGAGATGAATATATTA+GGG | - | chr3_1:55489264-55489283 | None:intergenic | 25.0% |
!!! | ATGTTTATTTTGATGTAGGA+TGG | + | chr3_1:55489405-55489424 | Msa0363300:intron | 25.0% |
!! | ATTTGTTAAGTCATATAGGT+TGG | + | chr3_1:55489498-55489517 | Msa0363300:CDS | 25.0% |
!!! | AATAAGTGTAGCTTTATAGT+TGG | - | chr3_1:55489553-55489572 | None:intergenic | 25.0% |
! | AACTATAAAGCTACACTTAT+TGG | + | chr3_1:55489552-55489571 | Msa0363300:CDS | 25.0% |
! | ACTATAAAGCTACACTTATT+GGG | + | chr3_1:55489553-55489572 | Msa0363300:CDS | 25.0% |
! | TCAAAATTATCAAGATGCAA+TGG | + | chr3_1:55490122-55490141 | Msa0363300:CDS | 25.0% |
! | CTAATATGGTGATTCATTAA+AGG | - | chr3_1:55490366-55490385 | None:intergenic | 25.0% |
! | ACAATTGAATTTCAAAAACG+AGG | + | chr3_1:55490455-55490474 | Msa0363300:CDS | 25.0% |
!! | TTAATATTTTCATCACCACA+TGG | - | chr3_1:55490632-55490651 | None:intergenic | 25.0% |
! | AATGGTGTAACTATTCAAAA+AGG | + | chr3_1:55490758-55490777 | Msa0363300:CDS | 25.0% |
! | TAAATTTCAGCATCAATTGT+GGG | - | chr3_1:55490823-55490842 | None:intergenic | 25.0% |
! | TTAAATTTCAGCATCAATTG+TGG | - | chr3_1:55490824-55490843 | None:intergenic | 25.0% |
!! | TTTAATTTCATCGCAAGATT+CGG | - | chr3_1:55490957-55490976 | None:intergenic | 25.0% |
! | TCATCATCTTCAAACATAAT+AGG | - | chr3_1:55491100-55491119 | None:intergenic | 25.0% |
!! | TATTCGTGACACAAAATTTT+TGG | + | chr3_1:55491150-55491169 | Msa0363300:CDS | 25.0% |
! | AATTCCCATTGAAATTTACT+TGG | + | chr3_1:55491227-55491246 | Msa0363300:CDS | 25.0% |
! | CTTTCCAAGTAAATTTCAAT+GGG | - | chr3_1:55491234-55491253 | None:intergenic | 25.0% |
! | CACCTTATTGAATTATGTAA+AGG | + | chr3_1:55491348-55491367 | Msa0363300:CDS | 25.0% |
! | TAATCTTCTCATAAAATCAG+CGG | - | chr3_1:55491512-55491531 | None:intergenic | 25.0% |
! | CTTATATCATGGTATATTAG+TGG | - | chr3_1:55491732-55491751 | None:intergenic | 25.0% |
! | CAATGGAAATGATAATTGTT+TGG | - | chr3_1:55491866-55491885 | None:intergenic | 25.0% |
! | AAATATTTACGACGCTATAA+TGG | + | chr3_1:55492187-55492206 | Msa0363300:CDS | 25.0% |
! | AATATTTACGACGCTATAAT+GGG | + | chr3_1:55492188-55492207 | Msa0363300:CDS | 25.0% |
!! | GTACAGGAAAAACTTTTATT+TGG | + | chr3_1:55492261-55492280 | Msa0363300:CDS | 25.0% |
! | AGTTAAAAGAATTTGCAGAA+TGG | + | chr3_1:55492759-55492778 | Msa0363300:CDS | 25.0% |
! | GTTAAAAGAATTTGCAGAAT+GGG | + | chr3_1:55492760-55492779 | Msa0363300:CDS | 25.0% |
!!! | GCTCTATTTTTAAAATACTC+TGG | - | chr3_1:55492938-55492957 | None:intergenic | 25.0% |
! | CAAATATGTTCTTTCTTCAT+CGG | - | chr3_1:55493023-55493042 | None:intergenic | 25.0% |
ATAAAATGAACCTCTTGAGT+TGG | + | chr3_1:55485903-55485922 | Msa0363300:intron | 30.0% | |
CAATGGTTAAAACAACTCTT+GGG | - | chr3_1:55486012-55486031 | None:intergenic | 30.0% | |
TCAATGGTTAAAACAACTCT+TGG | - | chr3_1:55486013-55486032 | None:intergenic | 30.0% | |
TTCAGCATATATAGAGTCAA+TGG | - | chr3_1:55486029-55486048 | None:intergenic | 30.0% | |
! | GAGTAAAAGCTGAAGAATTT+TGG | - | chr3_1:55486232-55486251 | None:intergenic | 30.0% |
! | AAAGCACCTTATGAAAATTG+AGG | - | chr3_1:55486350-55486369 | None:intergenic | 30.0% |
!!! | TCTGTAATTTTTTGTGATGG+CGG | + | chr3_1:55486539-55486558 | Msa0363300:intron | 30.0% |
GAAAGCTCAAAAGCAATATT+TGG | - | chr3_1:55486654-55486673 | None:intergenic | 30.0% | |
CATTATCCTTTCAGATATTC+AGG | + | chr3_1:55487329-55487348 | Msa0363300:intron | 30.0% | |
TTGTTTCCTGAATATCTGAA+AGG | - | chr3_1:55487338-55487357 | None:intergenic | 30.0% | |
AGATATTCAGGAAACAAGAA+AGG | + | chr3_1:55487341-55487360 | Msa0363300:intron | 30.0% | |
AAACAAGAAAGGTGACTTAT+AGG | + | chr3_1:55487352-55487371 | Msa0363300:intron | 30.0% | |
AACAAGAAAGGTGACTTATA+GGG | + | chr3_1:55487353-55487372 | Msa0363300:intron | 30.0% | |
GAATCAAAATTACATACCGT+TGG | - | chr3_1:55487469-55487488 | None:intergenic | 30.0% | |
ACTTTACCGTTAGATAAAGT+AGG | + | chr3_1:55487616-55487635 | Msa0363300:CDS | 30.0% | |
! | AAAATATAGTCTAAGGCATG+TGG | + | chr3_1:55487660-55487679 | Msa0363300:CDS | 30.0% |
! | AAATATAGTCTAAGGCATGT+GGG | + | chr3_1:55487661-55487680 | Msa0363300:CDS | 30.0% |
CAATACACTTACGATAATGA+AGG | + | chr3_1:55487751-55487770 | Msa0363300:CDS | 30.0% | |
ATATCAATGTCATCTCCTAA+AGG | - | chr3_1:55487911-55487930 | None:intergenic | 30.0% | |
ACATCTTGCCATCTAAAAAA+AGG | + | chr3_1:55488159-55488178 | Msa0363300:CDS | 30.0% | |
ACGCAAGAGAACAAAATTAT+TGG | + | chr3_1:55488187-55488206 | Msa0363300:CDS | 30.0% | |
TTCAGAATATTTCGATGTTG+GGG | + | chr3_1:55488344-55488363 | Msa0363300:intron | 30.0% | |
CATTAATGTGGTATGAAGAA+AGG | + | chr3_1:55488397-55488416 | Msa0363300:CDS | 30.0% | |
!! | CTTTAAAGTACAACTCATGA+AGG | - | chr3_1:55488518-55488537 | None:intergenic | 30.0% |
ATCGATAAGACCAAAAACAA+TGG | + | chr3_1:55488618-55488637 | Msa0363300:CDS | 30.0% | |
TCTCCATTCATTGTAAAAAC+TGG | - | chr3_1:55488654-55488673 | None:intergenic | 30.0% | |
!! | ATTGGAACACTACTTTTGAA+GGG | - | chr3_1:55489010-55489029 | None:intergenic | 30.0% |
TAGGGCATAATTAACATAGA+AGG | - | chr3_1:55489246-55489265 | None:intergenic | 30.0% | |
GTAGAGGAGATGAATATATT+AGG | - | chr3_1:55489265-55489284 | None:intergenic | 30.0% | |
TATCCATTAATATTCTCTCG+CGG | + | chr3_1:55489748-55489767 | Msa0363300:CDS | 30.0% | |
! | GACACAAAAACTCTTTTGAT+GGG | - | chr3_1:55489826-55489845 | None:intergenic | 30.0% |
! | TGACACAAAAACTCTTTTGA+TGG | - | chr3_1:55489827-55489846 | None:intergenic | 30.0% |
! | TTTTTGTGTCAATGAAAGAG+TGG | + | chr3_1:55489836-55489855 | Msa0363300:CDS | 30.0% |
!! | TATCAGCTCTAACATCTTTT+TGG | - | chr3_1:55489993-55490012 | None:intergenic | 30.0% |
TTAATTCAAGAGATACGGAA+TGG | + | chr3_1:55490300-55490319 | Msa0363300:CDS | 30.0% | |
ATACGGAATGGAAAGATATT+CGG | + | chr3_1:55490312-55490331 | Msa0363300:CDS | 30.0% | |
TGGATGAACAATTCGAAAAT+CGG | - | chr3_1:55490516-55490535 | None:intergenic | 30.0% | |
ATGCCCATATTAATGTTGAA+TGG | + | chr3_1:55490843-55490862 | Msa0363300:CDS | 30.0% | |
GCACCATTCAACATTAATAT+GGG | - | chr3_1:55490849-55490868 | None:intergenic | 30.0% | |
TGCACCATTCAACATTAATA+TGG | - | chr3_1:55490850-55490869 | None:intergenic | 30.0% | |
TTTGTTCAAGTACGTTAACA+AGG | + | chr3_1:55490892-55490911 | Msa0363300:CDS | 30.0% | |
TTGTTCAAGTACGTTAACAA+GGG | + | chr3_1:55490893-55490912 | Msa0363300:CDS | 30.0% | |
ATGAAAACTCAATCGTTCTT+CGG | - | chr3_1:55491062-55491081 | None:intergenic | 30.0% | |
! | AGAACGATTGAGTTTTCATT+TGG | + | chr3_1:55491063-55491082 | Msa0363300:CDS | 30.0% |
! | AATTTTGTGTCACGAATATG+TGG | - | chr3_1:55491148-55491167 | None:intergenic | 30.0% |
GCTTTCCAAGTAAATTTCAA+TGG | - | chr3_1:55491235-55491254 | None:intergenic | 30.0% | |
GCCCTTTACATAATTCAATA+AGG | - | chr3_1:55491353-55491372 | None:intergenic | 30.0% | |
CATCAAATACAACTCCTTTA+AGG | + | chr3_1:55491408-55491427 | Msa0363300:CDS | 30.0% | |
GATAAGGAAAAACATATACC+TGG | - | chr3_1:55491649-55491668 | None:intergenic | 30.0% | |
! | TAAGCAAGAAGCATAAGATA+AGG | - | chr3_1:55491665-55491684 | None:intergenic | 30.0% |
TTGTTTATAGCACAATTCCA+CGG | + | chr3_1:55491759-55491778 | Msa0363300:intron | 30.0% | |
GCATGGAAAAATAAAGAGTT+TGG | - | chr3_1:55491933-55491952 | None:intergenic | 30.0% | |
! | TAGCTTTTCAATTTCTGCAA+GGG | - | chr3_1:55491994-55492013 | None:intergenic | 30.0% |
CAACAAAGATTCATTGAAAG+AGG | + | chr3_1:55492124-55492143 | Msa0363300:CDS | 30.0% | |
!!! | TTTTTTTTATATGGGTACGG+TGG | + | chr3_1:55492239-55492258 | Msa0363300:CDS | 30.0% |
AAACATTCGTCAACAATGAA+TGG | - | chr3_1:55492404-55492423 | None:intergenic | 30.0% | |
TGCGCGCAAAAATAATAATA+TGG | + | chr3_1:55492468-55492487 | Msa0363300:CDS | 30.0% | |
GCGCGCAAAAATAATAATAT+GGG | + | chr3_1:55492469-55492488 | Msa0363300:CDS | 30.0% | |
!!! | TCTTCGACAATCAGATTTTT+TGG | - | chr3_1:55492971-55492990 | None:intergenic | 30.0% |
TATCTTGCCATGCAAAAAGA+AGG | + | chr3_1:55485706-55485725 | Msa0363300:CDS | 35.0% | |
! | TGATGTTCCTTCTTTTTGCA+TGG | - | chr3_1:55485716-55485735 | None:intergenic | 35.0% |
CAAAAAGAAGGAACATCAGA+AGG | + | chr3_1:55485718-55485737 | Msa0363300:CDS | 35.0% | |
!! | TTTTTCGTAGTTTTTTGGCC+TGG | - | chr3_1:55485752-55485771 | None:intergenic | 35.0% |
!!! | GGGACTTTTTCGTAGTTTTT+TGG | - | chr3_1:55485757-55485776 | None:intergenic | 35.0% |
!!! | CTGTTTTTGTGTGTAGAAAG+GGG | - | chr3_1:55485777-55485796 | None:intergenic | 35.0% |
!!! | GCTGTTTTTGTGTGTAGAAA+GGG | - | chr3_1:55485778-55485797 | None:intergenic | 35.0% |
!!! | TGCTGTTTTTGTGTGTAGAA+AGG | - | chr3_1:55485779-55485798 | None:intergenic | 35.0% |
! | TTTTAATGCTCCAACTCAAG+AGG | - | chr3_1:55485916-55485935 | None:intergenic | 35.0% |
! | AGTTGCTGTTCATAGAGTTA+AGG | + | chr3_1:55486299-55486318 | Msa0363300:CDS | 35.0% |
!!! | TAATTTTTTGTGATGGCGGT+GGG | + | chr3_1:55486543-55486562 | Msa0363300:intron | 35.0% |
TTAGAGGGGAACAATTTAGA+TGG | + | chr3_1:55486878-55486897 | Msa0363300:intron | 35.0% | |
TTGGTGTGATAAGAGGAATT+AGG | - | chr3_1:55487169-55487188 | None:intergenic | 35.0% | |
ATGAACATTGGTGTGATAAG+AGG | - | chr3_1:55487176-55487195 | None:intergenic | 35.0% | |
ACAAGAAAGGTGACTTATAG+GGG | + | chr3_1:55487354-55487373 | Msa0363300:intron | 35.0% | |
!!! | CGTAGTTTTAAATGACACGA+AGG | + | chr3_1:55487488-55487507 | Msa0363300:intron | 35.0% |
TTGAGGCCTACTTTATCTAA+CGG | - | chr3_1:55487625-55487644 | None:intergenic | 35.0% | |
! | CTATATTTTCCAGGACCAAT+TGG | - | chr3_1:55487649-55487668 | None:intergenic | 35.0% |
GTCCTGGAAAATATAGTCTA+AGG | + | chr3_1:55487653-55487672 | Msa0363300:CDS | 35.0% | |
! | TGCCTTAGACTATATTTTCC+AGG | - | chr3_1:55487658-55487677 | None:intergenic | 35.0% |
! | TATTGATTGGAAACTGTCGA+CGG | - | chr3_1:55487736-55487755 | None:intergenic | 35.0% |
AAGCGATAGTGAAACACTAT+CGG | + | chr3_1:55487931-55487950 | Msa0363300:CDS | 35.0% | |
TGAAACACTATCGGATGAAT+CGG | + | chr3_1:55487940-55487959 | Msa0363300:CDS | 35.0% | |
GATGTTCCTGACAATGATTA+TGG | + | chr3_1:55488025-55488044 | Msa0363300:CDS | 35.0% | |
TTCCTGACAATGATTATGGT+AGG | + | chr3_1:55488029-55488048 | Msa0363300:intron | 35.0% | |
AACCTACCATAATCATTGTC+AGG | - | chr3_1:55488034-55488053 | None:intergenic | 35.0% | |
!!! | CGTCTTGTCCTTTTTTTAGA+TGG | - | chr3_1:55488170-55488189 | None:intergenic | 35.0% |
TTGGTTGAATCCGATATAGT+TGG | + | chr3_1:55488206-55488225 | Msa0363300:CDS | 35.0% | |
! | AGAGAATCGGCAAGTATTTT+TGG | - | chr3_1:55488239-55488258 | None:intergenic | 35.0% |
CAATCCTTACAAACATATCG+CGG | - | chr3_1:55488372-55488391 | None:intergenic | 35.0% | |
ATGCAGCACATAGAAAATTC+TGG | - | chr3_1:55488450-55488469 | None:intergenic | 35.0% | |
CCATTCATTGTAAAAACTGG+CGG | - | chr3_1:55488651-55488670 | None:intergenic | 35.0% | |
GGAGAAAATTACCACCAAAT+CGG | + | chr3_1:55488669-55488688 | Msa0363300:CDS | 35.0% | |
! | ATACTGATAACGAAATCGGA+TGG | + | chr3_1:55488748-55488767 | Msa0363300:intron | 35.0% |
!! | GATTGGAACACTACTTTTGA+AGG | - | chr3_1:55489011-55489030 | None:intergenic | 35.0% |
TTCAAGAACAGCAAAAGAGA+AGG | - | chr3_1:55489287-55489306 | None:intergenic | 35.0% | |
! | CAAGTATTGTTGACGAGTTA+AGG | + | chr3_1:55489452-55489471 | Msa0363300:CDS | 35.0% |
AGCTACACTTATTGGGTAAA+AGG | + | chr3_1:55489560-55489579 | Msa0363300:CDS | 35.0% | |
GCTACACTTATTGGGTAAAA+GGG | + | chr3_1:55489561-55489580 | Msa0363300:CDS | 35.0% | |
CTACACTTATTGGGTAAAAG+GGG | + | chr3_1:55489562-55489581 | Msa0363300:CDS | 35.0% | |
CAGGTATGATGTCTCAAAAA+CGG | - | chr3_1:55489719-55489738 | None:intergenic | 35.0% | |
! | TTAATGGATATTGTAGTGCC+AGG | - | chr3_1:55489738-55489757 | None:intergenic | 35.0% |
TTGCGTACAAATTGCAACAA+AGG | + | chr3_1:55489860-55489879 | Msa0363300:CDS | 35.0% | |
TGCGTACAAATTGCAACAAA+GGG | + | chr3_1:55489861-55489880 | Msa0363300:CDS | 35.0% | |
AAATTGCTGCAACAACTTTC+TGG | - | chr3_1:55489914-55489933 | None:intergenic | 35.0% | |
TGTTAGAGCTGATATGTACA+AGG | + | chr3_1:55489999-55490018 | Msa0363300:CDS | 35.0% | |
GTTAGAGCTGATATGTACAA+GGG | + | chr3_1:55490000-55490019 | Msa0363300:CDS | 35.0% | |
GTACAAGGGATTATATGAAG+CGG | + | chr3_1:55490014-55490033 | Msa0363300:CDS | 35.0% | |
ATGCAATGGCAATATGTTCT+TGG | + | chr3_1:55490136-55490155 | Msa0363300:CDS | 35.0% | |
ATGGCAATATGTTCTTGGAT+TGG | + | chr3_1:55490141-55490160 | Msa0363300:CDS | 35.0% | |
CATTTACATGCAACCACAAA+TGG | + | chr3_1:55490184-55490203 | Msa0363300:CDS | 35.0% | |
TTTAAGTATGCAACCATCTC+CGG | - | chr3_1:55490210-55490229 | None:intergenic | 35.0% | |
! | ACAATTTGAAACCAGCAGAT+AGG | + | chr3_1:55490235-55490254 | Msa0363300:CDS | 35.0% |
AAAATTCTGCTCACCAAGTT+TGG | - | chr3_1:55490261-55490280 | None:intergenic | 35.0% | |
! | ACTTCCTCATGCTCATATTT+TGG | + | chr3_1:55490478-55490497 | Msa0363300:CDS | 35.0% |
AACACCAAAATATGAGCATG+AGG | - | chr3_1:55490485-55490504 | None:intergenic | 35.0% | |
GGATGAACAATTCGAAAATC+GGG | - | chr3_1:55490515-55490534 | None:intergenic | 35.0% | |
TGAGACAATATTGTAGAGCT+CGG | - | chr3_1:55490591-55490610 | None:intergenic | 35.0% | |
ACATGGTCCATGTATCATAA+GGG | - | chr3_1:55490615-55490634 | None:intergenic | 35.0% | |
AATTCACCGTGTACGATAAA+TGG | + | chr3_1:55490650-55490669 | Msa0363300:CDS | 35.0% | |
ATTCACCGTGTACGATAAAT+GGG | + | chr3_1:55490651-55490670 | Msa0363300:CDS | 35.0% | |
TGGGACAACGTATCTATTAT+CGG | - | chr3_1:55490795-55490814 | None:intergenic | 35.0% | |
! | CGATTGAGTTTTCATTTGGA+AGG | + | chr3_1:55491067-55491086 | Msa0363300:CDS | 35.0% |
!!! | GTGACACAAAATTTTTGGCT+TGG | + | chr3_1:55491155-55491174 | Msa0363300:CDS | 35.0% |
!!! | CACAAAATTTTTGGCTTGGA+TGG | + | chr3_1:55491159-55491178 | Msa0363300:CDS | 35.0% |
!!! | AAAATTTTTGGCTTGGATGG+AGG | + | chr3_1:55491162-55491181 | Msa0363300:CDS | 35.0% |
ATAAGTGAGATCCTTTGCAT+CGG | - | chr3_1:55491203-55491222 | None:intergenic | 35.0% | |
ATGCAAAGGATCTCACTTAT+GGG | + | chr3_1:55491203-55491222 | Msa0363300:CDS | 35.0% | |
TTGCTTCGTATTAGGTTTGT+TGG | + | chr3_1:55491435-55491454 | Msa0363300:CDS | 35.0% | |
GTTTATTGATGCCATTAACC+AGG | + | chr3_1:55491471-55491490 | Msa0363300:CDS | 35.0% | |
! | CATTAACCAGGCATCATTTT+GGG | + | chr3_1:55491483-55491502 | Msa0363300:CDS | 35.0% |
! | ATTAACCAGGCATCATTTTG+GGG | + | chr3_1:55491484-55491503 | Msa0363300:CDS | 35.0% |
TGCTTACAAATCAATTTGCG+CGG | + | chr3_1:55491545-55491564 | Msa0363300:CDS | 35.0% | |
! | AAGTAGTGTGGTCTAAAACA+TGG | + | chr3_1:55491572-55491591 | Msa0363300:CDS | 35.0% |
! | AGTAGTGTGGTCTAAAACAT+GGG | + | chr3_1:55491573-55491592 | Msa0363300:CDS | 35.0% |
TCTTGCTTAGAATGAAACGA+TGG | + | chr3_1:55491676-55491695 | Msa0363300:intron | 35.0% | |
AATGAAACGATGGCATGATA+AGG | + | chr3_1:55491686-55491705 | Msa0363300:intron | 35.0% | |
TATCATTTCCATTGTATGCG+AGG | + | chr3_1:55491872-55491891 | Msa0363300:intron | 35.0% | |
! | GTAGCTTTTCAATTTCTGCA+AGG | - | chr3_1:55491995-55492014 | None:intergenic | 35.0% |
!!! | GTCCTTGAAATTTTTTCCGT+GGG | - | chr3_1:55492024-55492043 | None:intergenic | 35.0% |
TTTATAGCGACATCAGTTCT+TGG | - | chr3_1:55492062-55492081 | None:intergenic | 35.0% | |
ATGTCGCTATAAATAGTGCT+GGG | + | chr3_1:55492069-55492088 | Msa0363300:CDS | 35.0% | |
AGAGTTGAGGCAAATAAACA+AGG | + | chr3_1:55492212-55492231 | Msa0363300:CDS | 35.0% | |
TGTTAGGACAATTTGTCCTT+TGG | - | chr3_1:55492312-55492331 | None:intergenic | 35.0% | |
AATGAATGGTATATGGAACC+TGG | - | chr3_1:55492390-55492409 | None:intergenic | 35.0% | |
CGTCAACAATGAATGGTATA+TGG | - | chr3_1:55492397-55492416 | None:intergenic | 35.0% | |
ATTGAACCATTAAGCCCATT+GGG | + | chr3_1:55492434-55492453 | Msa0363300:CDS | 35.0% | |
AAACAATGCTTGTGCATCAT+TGG | - | chr3_1:55492503-55492522 | None:intergenic | 35.0% | |
TGCGTTTATTATGTCTTGTC+TGG | - | chr3_1:55492642-55492661 | None:intergenic | 35.0% | |
! | ACCAATATGAGACTTTTGCA+CGG | + | chr3_1:55492713-55492732 | Msa0363300:CDS | 35.0% |
AGAATTTGCAGAATGGGTAT+TGG | + | chr3_1:55492766-55492785 | Msa0363300:CDS | 35.0% | |
GAATTTGCAGAATGGGTATT+GGG | + | chr3_1:55492767-55492786 | Msa0363300:CDS | 35.0% | |
TAACATGATCACCTGAACTA+TGG | - | chr3_1:55492865-55492884 | None:intergenic | 35.0% | |
TGTTAGCAACAATACTACTG+GGG | - | chr3_1:55493063-55493082 | None:intergenic | 35.0% | |
CTGTTAGCAACAATACTACT+GGG | - | chr3_1:55493064-55493083 | None:intergenic | 35.0% | |
!!! | ACGTTGAATGAGAGGCATTT+TGG | - | chr3_1:55486186-55486205 | None:intergenic | 40.0% |
TAATGAGCACGTTGAATGAG+AGG | - | chr3_1:55486194-55486213 | None:intergenic | 40.0% | |
! | ATTCTTCAGCTTTTACTCGG+CGG | + | chr3_1:55486234-55486253 | Msa0363300:intron | 40.0% |
TTTACTCGGCGGTTTCAAAA+CGG | + | chr3_1:55486245-55486264 | Msa0363300:CDS | 40.0% | |
!!! | GTAATTTTTTGTGATGGCGG+TGG | + | chr3_1:55486542-55486561 | Msa0363300:intron | 40.0% |
TGCGATTCACATACACATCA+AGG | - | chr3_1:55487311-55487330 | None:intergenic | 40.0% | |
CAAGAAAGGTGACTTATAGG+GGG | + | chr3_1:55487355-55487374 | Msa0363300:intron | 40.0% | |
ACGGTTGCTCATGTCATAAT+AGG | + | chr3_1:55487384-55487403 | Msa0363300:intron | 40.0% | |
CCATTGTCTTTATGCGTTGA+TGG | - | chr3_1:55487595-55487614 | None:intergenic | 40.0% | |
CCATCAACGCATAAAGACAA+TGG | + | chr3_1:55487592-55487611 | Msa0363300:CDS | 40.0% | |
AAAGTAGGCCTCAAACCAAT+TGG | + | chr3_1:55487631-55487650 | Msa0363300:CDS | 40.0% | |
CATGTGGGAAATCAAAGTAG+TGG | + | chr3_1:55487676-55487695 | Msa0363300:CDS | 40.0% | |
CAATTAAACCAATCATGCGG+GGG | - | chr3_1:55487983-55488002 | None:intergenic | 40.0% | |
GCAATTAAACCAATCATGCG+GGG | - | chr3_1:55487984-55488003 | None:intergenic | 40.0% | |
CGCAATTAAACCAATCATGC+GGG | - | chr3_1:55487985-55488004 | None:intergenic | 40.0% | |
GCGCAATTAAACCAATCATG+CGG | - | chr3_1:55487986-55488005 | None:intergenic | 40.0% | |
AGGATTGCAACGCATTAATG+TGG | + | chr3_1:55488385-55488404 | Msa0363300:CDS | 40.0% | |
! | TTTTCTATGTGCTGCATGCA+AGG | + | chr3_1:55488453-55488472 | Msa0363300:CDS | 40.0% |
TACAACTCATGAAGGGATTG+AGG | - | chr3_1:55488510-55488529 | None:intergenic | 40.0% | |
ATGTTCGCCTTCACTTCAAT+TGG | + | chr3_1:55488588-55488607 | Msa0363300:CDS | 40.0% | |
CTTTGCACCAATTGAAGTGA+AGG | - | chr3_1:55488598-55488617 | None:intergenic | 40.0% | |
! | CCGCCAGTTTTTACAATGAA+TGG | + | chr3_1:55488648-55488667 | Msa0363300:CDS | 40.0% |
GCAAGACATGCACTCATATT+TGG | - | chr3_1:55488801-55488820 | None:intergenic | 40.0% | |
AACAGCAAAAGAGAAGGTAG+AGG | - | chr3_1:55489281-55489300 | None:intergenic | 40.0% | |
!! | CTCTTTGCGATAGTGGAAAT+GGG | + | chr3_1:55489333-55489352 | Msa0363300:intron | 40.0% |
ATCGTAATCACCTACAACCA+AGG | - | chr3_1:55489635-55489654 | None:intergenic | 40.0% | |
ATCATTGTTGAGTGTGTGTC+AGG | + | chr3_1:55489676-55489695 | Msa0363300:CDS | 40.0% | |
!!! | CGTTTTTGAGACATCATACC+TGG | + | chr3_1:55489717-55489736 | Msa0363300:CDS | 40.0% |
TCACCGCGAGAGAATATTAA+TGG | - | chr3_1:55489754-55489773 | None:intergenic | 40.0% | |
! | TTGCAGCAATTTTGTTGCGA+TGG | + | chr3_1:55489922-55489941 | Msa0363300:CDS | 40.0% |
GATTTAGCATGATCGAGTCT+TGG | + | chr3_1:55489944-55489963 | Msa0363300:CDS | 40.0% | |
TCGAGTCTTGGCGATTAAAA+TGG | + | chr3_1:55489956-55489975 | Msa0363300:CDS | 40.0% | |
GAGAACAATCCAAGTTCAGT+GGG | + | chr3_1:55490048-55490067 | Msa0363300:CDS | 40.0% | |
ATCCAAGTTCAGTGGGAAAA+AGG | + | chr3_1:55490055-55490074 | Msa0363300:CDS | 40.0% | |
TCCAAGTTCAGTGGGAAAAA+GGG | + | chr3_1:55490056-55490075 | Msa0363300:CDS | 40.0% | |
ATATTCGGCAAAGTCAAAGC+AGG | + | chr3_1:55490327-55490346 | Msa0363300:CDS | 40.0% | |
GAACAATTCGAAAATCGGGA+TGG | - | chr3_1:55490511-55490530 | None:intergenic | 40.0% | |
TGTGCTGAAATTCCTGACAA+AGG | + | chr3_1:55490557-55490576 | Msa0363300:CDS | 40.0% | |
!!! | TCGGGATTTTTTCCTTTGTC+AGG | - | chr3_1:55490572-55490591 | None:intergenic | 40.0% |
GAGACAATATTGTAGAGCTC+GGG | - | chr3_1:55490590-55490609 | None:intergenic | 40.0% | |
GTCTCATCCCTTATGATACA+TGG | + | chr3_1:55490605-55490624 | Msa0363300:CDS | 40.0% | |
CACATGGTCCATGTATCATA+AGG | - | chr3_1:55490616-55490635 | None:intergenic | 40.0% | |
CTTATGATACATGGACCATG+TGG | + | chr3_1:55490614-55490633 | Msa0363300:CDS | 40.0% | |
CACTTCCCATTTATCGTACA+CGG | - | chr3_1:55490659-55490678 | None:intergenic | 40.0% | |
GTAACCGTCAGCATCAATAA+CGG | - | chr3_1:55490717-55490736 | None:intergenic | 40.0% | |
TTACCCGGTTTACAGAAGAA+GGG | + | chr3_1:55490733-55490752 | Msa0363300:CDS | 40.0% | |
TTGTCCCTTCTTCTGTAAAC+CGG | - | chr3_1:55490740-55490759 | None:intergenic | 40.0% | |
GTTTACAGAAGAAGGGACAA+TGG | + | chr3_1:55490740-55490759 | Msa0363300:CDS | 40.0% | |
! | GCATCAATTGTGGGTTGTAT+GGG | - | chr3_1:55490814-55490833 | None:intergenic | 40.0% |
! | AGCATCAATTGTGGGTTGTA+TGG | - | chr3_1:55490815-55490834 | None:intergenic | 40.0% |
AAACTCAATCGTTCTTCGGA+AGG | - | chr3_1:55491058-55491077 | None:intergenic | 40.0% | |
! | TGAAGATGATGACGACTTAG+AGG | + | chr3_1:55491108-55491127 | Msa0363300:CDS | 40.0% |
CAAGATATATGCCGATGCAA+AGG | + | chr3_1:55491189-55491208 | Msa0363300:CDS | 40.0% | |
GATGCAAAGGATCTCACTTA+TGG | + | chr3_1:55491202-55491221 | Msa0363300:CDS | 40.0% | |
TGCAAAGGATCTCACTTATG+GGG | + | chr3_1:55491204-55491223 | Msa0363300:CDS | 40.0% | |
ACTGATACACCTCTTTGTCT+TGG | - | chr3_1:55491277-55491296 | None:intergenic | 40.0% | |
! | AGACAAAGAGGTGTATCAGT+TGG | + | chr3_1:55491277-55491296 | Msa0363300:CDS | 40.0% |
! | AAAGAGGTGTATCAGTTGGA+AGG | + | chr3_1:55491281-55491300 | Msa0363300:CDS | 40.0% |
TACGAAGCAAGTCTCCTTAA+AGG | - | chr3_1:55491425-55491444 | None:intergenic | 40.0% | |
! | AAGGAGACTTGCTTCGTATT+AGG | + | chr3_1:55491427-55491446 | Msa0363300:CDS | 40.0% |
CCAAAATGATGCCTGGTTAA+TGG | - | chr3_1:55491485-55491504 | None:intergenic | 40.0% | |
! | CCATTAACCAGGCATCATTT+TGG | + | chr3_1:55491482-55491501 | Msa0363300:CDS | 40.0% |
!! | GTTTTAGACCACACTACTTC+TGG | - | chr3_1:55491571-55491590 | None:intergenic | 40.0% |
TATAGCACAATTCCACGGTA+TGG | + | chr3_1:55491764-55491783 | Msa0363300:intron | 40.0% | |
CATCATATATGTCCATACCG+TGG | - | chr3_1:55491779-55491798 | None:intergenic | 40.0% | |
AAAGATGACCTCGCATACAA+TGG | - | chr3_1:55491883-55491902 | None:intergenic | 40.0% | |
GTCCCACGGAAAAAATTTCA+AGG | + | chr3_1:55492019-55492038 | Msa0363300:CDS | 40.0% | |
!!! | GGTCCTTGAAATTTTTTCCG+TGG | - | chr3_1:55492025-55492044 | None:intergenic | 40.0% |
ACATCAGTTCTTGGCATAGA+CGG | - | chr3_1:55492053-55492072 | None:intergenic | 40.0% | |
GATGTCGCTATAAATAGTGC+TGG | + | chr3_1:55492068-55492087 | Msa0363300:CDS | 40.0% | |
! | CATTGAAAGAGGAGCATGAT+CGG | + | chr3_1:55492135-55492154 | Msa0363300:CDS | 40.0% |
TCATCTGCATTGAGATCCAA+AGG | + | chr3_1:55492293-55492312 | Msa0363300:CDS | 40.0% | |
AGGACAAATTGTCCTAACAG+TGG | + | chr3_1:55492313-55492332 | Msa0363300:CDS | 40.0% | |
! | CAATGGGCTTAATGGTTCAA+TGG | - | chr3_1:55492435-55492454 | None:intergenic | 40.0% |
CATTGAACCATTAAGCCCAT+TGG | + | chr3_1:55492433-55492452 | Msa0363300:CDS | 40.0% | |
TTGAACCATTAAGCCCATTG+GGG | + | chr3_1:55492435-55492454 | Msa0363300:CDS | 40.0% | |
GCAATATCAATTGCCCCAAT+GGG | - | chr3_1:55492451-55492470 | None:intergenic | 40.0% | |
!! | GATGCACAAGCATTGTTTTG+AGG | + | chr3_1:55492505-55492524 | Msa0363300:CDS | 40.0% |
TGCAAAGCAGACATTCCATT+CGG | + | chr3_1:55492554-55492573 | Msa0363300:CDS | 40.0% | |
! | TCGTTCTAGGTGATGACTTT+CGG | + | chr3_1:55492588-55492607 | Msa0363300:CDS | 40.0% |
ATTCTACCAGTGGTTCCTAA+AGG | + | chr3_1:55492614-55492633 | Msa0363300:CDS | 40.0% | |
! | ATGTCTTGTCTGGTTCCTTT+AGG | - | chr3_1:55492632-55492651 | None:intergenic | 40.0% |
ACCGTGCAAAAGTCTCATAT+TGG | - | chr3_1:55492717-55492736 | None:intergenic | 40.0% | |
CCTGTTAGCAACAATACTAC+TGG | - | chr3_1:55493065-55493084 | None:intergenic | 40.0% | |
CCAGTAGTATTGTTGCTAAC+AGG | + | chr3_1:55493062-55493081 | Msa0363300:CDS | 40.0% | |
TATGGTGTGTGAACATCATC+AGG | - | chr3_1:55493088-55493107 | None:intergenic | 40.0% | |
AAGGAACTCGCTGCTGAATT+TGG | + | chr3_1:55486318-55486337 | Msa0363300:CDS | 45.0% | |
GACTTATAGGGGGTGAAACA+CGG | + | chr3_1:55487365-55487384 | Msa0363300:intron | 45.0% | |
CGGAAATGGAATCCGCTAAA+AGG | + | chr3_1:55487436-55487455 | Msa0363300:CDS | 45.0% | |
!!! | GTTGGTTTTGCGCCTTTTAG+CGG | - | chr3_1:55487451-55487470 | None:intergenic | 45.0% |
! | GCTAAAAGGCGCAAAACCAA+CGG | + | chr3_1:55487450-55487469 | Msa0363300:CDS | 45.0% |
!! | TTCCAGGACCAATTGGTTTG+AGG | - | chr3_1:55487642-55487661 | None:intergenic | 45.0% |
ACTATCGGATGAATCGGATG+TGG | + | chr3_1:55487946-55487965 | Msa0363300:CDS | 45.0% | |
GATCATTTGTGTGCCACAGA+AGG | + | chr3_1:55488119-55488138 | Msa0363300:intron | 45.0% | |
GGAACCGCGATATGTTTGTA+AGG | + | chr3_1:55488365-55488384 | Msa0363300:CDS | 45.0% | |
ACTCATGAAGGGATTGAGGT+AGG | - | chr3_1:55488506-55488525 | None:intergenic | 45.0% | |
! | TAGGCAGCAAACTACCGATT+TGG | - | chr3_1:55488686-55488705 | None:intergenic | 45.0% |
!! | GTAGTTTGCTGCCTAAACCA+GGG | + | chr3_1:55488691-55488710 | Msa0363300:CDS | 45.0% |
!! | TAGTTTGCTGCCTAAACCAG+GGG | + | chr3_1:55488692-55488711 | Msa0363300:CDS | 45.0% |
!! | TTAGGTTGATCCCCTGGTTT+AGG | - | chr3_1:55488705-55488724 | None:intergenic | 45.0% |
CTCTTGTCTCTTCTTACGCT+AGG | - | chr3_1:55489064-55489083 | None:intergenic | 45.0% | |
TTAGCTGCTCTTTGCGATAG+TGG | + | chr3_1:55489326-55489345 | Msa0363300:intron | 45.0% | |
!! | GCTCTTTGCGATAGTGGAAA+TGG | + | chr3_1:55489332-55489351 | Msa0363300:intron | 45.0% |
!! | TTTGCGATAGTGGAAATGGG+TGG | + | chr3_1:55489336-55489355 | Msa0363300:intron | 45.0% |
TTGGGTAAAAGGGGATACGA+TGG | + | chr3_1:55489571-55489590 | Msa0363300:CDS | 45.0% | |
GTAAAAGGGGATACGATGGT+CGG | + | chr3_1:55489575-55489594 | Msa0363300:CDS | 45.0% | |
TAATGCACCAACTGCATCAG+AGG | + | chr3_1:55489603-55489622 | Msa0363300:CDS | 45.0% | |
TGTAGGTGATTACGATGCAG+CGG | + | chr3_1:55489639-55489658 | Msa0363300:CDS | 45.0% | |
ATATTCTCTCGCGGTGAAGA+CGG | + | chr3_1:55489757-55489776 | Msa0363300:CDS | 45.0% | |
CAACAAAGGGTCGATGATCA+AGG | + | chr3_1:55489874-55489893 | Msa0363300:CDS | 45.0% | |
CGAGAACAATCCAAGTTCAG+TGG | + | chr3_1:55490047-55490066 | Msa0363300:CDS | 45.0% | |
! | ACCCTTTTTCCCACTGAACT+TGG | - | chr3_1:55490060-55490079 | None:intergenic | 45.0% |
GTGTTACCCGCAAGATTTGT+CGG | + | chr3_1:55490081-55490100 | Msa0363300:CDS | 45.0% | |
TACATGCAACCACAAATGGC+CGG | + | chr3_1:55490188-55490207 | Msa0363300:CDS | 45.0% | |
CAATTCGAAAATCGGGATGG+AGG | - | chr3_1:55490508-55490527 | None:intergenic | 45.0% | |
AGCACCGTTATTGATGCTGA+CGG | + | chr3_1:55490710-55490729 | Msa0363300:CDS | 45.0% | |
TATTGATGCTGACGGTTACC+CGG | + | chr3_1:55490718-55490737 | Msa0363300:CDS | 45.0% | |
GTTACCCGGTTTACAGAAGA+AGG | + | chr3_1:55490732-55490751 | Msa0363300:CDS | 45.0% | |
TGTCCCTTCTTCTGTAAACC+GGG | - | chr3_1:55490739-55490758 | None:intergenic | 45.0% | |
! | TCTTGGTGACCATCTGTGTT+GGG | - | chr3_1:55491260-55491279 | None:intergenic | 45.0% |
AGATGGTCACCAAGACAAAG+AGG | + | chr3_1:55491265-55491284 | Msa0363300:CDS | 45.0% | |
TAAAATTTCTCCCCAGACCC+TGG | - | chr3_1:55491322-55491341 | None:intergenic | 45.0% | |
GAACACACAAGATGCGTCTT+TGG | - | chr3_1:55491627-55491646 | None:intergenic | 45.0% | |
GAAAAGCTACAACAGTCCCA+CGG | + | chr3_1:55492005-55492024 | Msa0363300:CDS | 45.0% | |
TTCTTGGCATAGACGGATAG+TGG | - | chr3_1:55492046-55492065 | None:intergenic | 45.0% | |
TTATATGGGTACGGTGGTAC+AGG | + | chr3_1:55492245-55492264 | Msa0363300:CDS | 45.0% | |
ATAGCAGCGCTTCTTATTCC+AGG | + | chr3_1:55492347-55492366 | Msa0363300:CDS | 45.0% | |
! | AATTGCCCCAATGGGCTTAA+TGG | - | chr3_1:55492443-55492462 | None:intergenic | 45.0% |
CGCAATATCAATTGCCCCAA+TGG | - | chr3_1:55492452-55492471 | None:intergenic | 45.0% | |
AGGCTGTTGATCGTAGTTTC+CGG | + | chr3_1:55492525-55492544 | Msa0363300:CDS | 45.0% | |
TGTCTGCTTTGCATACATCC+CGG | - | chr3_1:55492547-55492566 | None:intergenic | 45.0% | |
AAAGCAGACATTCCATTCGG+AGG | + | chr3_1:55492557-55492576 | Msa0363300:CDS | 45.0% | |
CTTTCGGCAAATTCTACCAG+TGG | + | chr3_1:55492604-55492623 | Msa0363300:CDS | 45.0% | |
ACTATGGATAAGCAGGTCGT+CGG | - | chr3_1:55492849-55492868 | None:intergenic | 45.0% | |
GACCTGCTTATCCATAGTTC+AGG | + | chr3_1:55492851-55492870 | Msa0363300:CDS | 45.0% | |
CACCTGAACTATGGATAAGC+AGG | - | chr3_1:55492856-55492875 | None:intergenic | 45.0% | |
!!! | TTTTTTAATTTTTTTTTTGA+AGG | + | chr3_1:55486418-55486437 | Msa0363300:intron | 5.0% |
AGATTGAACCCCCGCATGAT+TGG | + | chr3_1:55487972-55487991 | Msa0363300:CDS | 50.0% | |
CTATGTGCTGCATGCAAGGA+AGG | + | chr3_1:55488457-55488476 | Msa0363300:CDS | 50.0% | |
ATGAAGGGATTGAGGTAGGC+GGG | - | chr3_1:55488502-55488521 | None:intergenic | 50.0% | |
CATGAAGGGATTGAGGTAGG+CGG | - | chr3_1:55488503-55488522 | None:intergenic | 50.0% | |
! | CGGTGCTCTGCCATTGTTTT+TGG | - | chr3_1:55488631-55488650 | None:intergenic | 50.0% |
!! | GCAGCAAACTACCGATTTGG+TGG | - | chr3_1:55488683-55488702 | None:intergenic | 50.0% |
!! | GGTAGTTTGCTGCCTAAACC+AGG | + | chr3_1:55488690-55488709 | Msa0363300:CDS | 50.0% |
!! | GCAAACTTAGGTTGATCCCC+TGG | - | chr3_1:55488711-55488730 | None:intergenic | 50.0% |
! | ACGATGCAGCGGATTTCGAA+AGG | + | chr3_1:55489650-55489669 | Msa0363300:CDS | 50.0% |
! | CGATGCAGCGGATTTCGAAA+GGG | + | chr3_1:55489651-55489670 | Msa0363300:CDS | 50.0% |
TTACCCGCAAGATTTGTCGG+CGG | + | chr3_1:55490084-55490103 | Msa0363300:CDS | 50.0% | |
ACCAGCAGATAGGCCAAACT+TGG | + | chr3_1:55490245-55490264 | Msa0363300:CDS | 50.0% | |
ACCAAGTTTGGCCTATCTGC+TGG | - | chr3_1:55490249-55490268 | None:intergenic | 50.0% | |
CATAGAAGGCAGCAGTCACT+CGG | - | chr3_1:55490925-55490944 | None:intergenic | 50.0% | |
GAGTGACTGCTGCCTTCTAT+GGG | + | chr3_1:55490924-55490943 | Msa0363300:CDS | 50.0% | |
CTGCATGTGAAGCTGTTTGC+AGG | + | chr3_1:55491002-55491021 | Msa0363300:CDS | 50.0% | |
!! | GGAAAGCATCCCAACACAGA+TGG | + | chr3_1:55491248-55491267 | Msa0363300:CDS | 50.0% |
! | GTCTTGGTGACCATCTGTGT+TGG | - | chr3_1:55491261-55491280 | None:intergenic | 50.0% |
AGGATTCACTTTGTGCCACC+AGG | + | chr3_1:55491301-55491320 | Msa0363300:CDS | 50.0% | |
GGATTCACTTTGTGCCACCA+GGG | + | chr3_1:55491302-55491321 | Msa0363300:CDS | 50.0% | |
AGACGCATCTTGTGTGTTCC+AGG | + | chr3_1:55491628-55491647 | Msa0363300:CDS | 50.0% | |
CGTCTAGCTGAAGATCTGCA+TGG | - | chr3_1:55491950-55491969 | None:intergenic | 50.0% | |
!! | CGCTATAATGGGCAGAGTTG+AGG | + | chr3_1:55492199-55492218 | Msa0363300:CDS | 50.0% |
TACCACTTGACGCCACTGTT+AGG | - | chr3_1:55492328-55492347 | None:intergenic | 50.0% | |
CAGCGCTTCTTATTCCAGGT+GGG | + | chr3_1:55492351-55492370 | Msa0363300:CDS | 50.0% | |
GGCTGTTGATCGTAGTTTCC+GGG | + | chr3_1:55492526-55492545 | Msa0363300:CDS | 50.0% | |
AGACATTCCATTCGGAGGCA+AGG | + | chr3_1:55492562-55492581 | Msa0363300:CDS | 50.0% | |
! | CTGGTTCCTTTAGGAACCAC+TGG | - | chr3_1:55492623-55492642 | None:intergenic | 50.0% |
GCATCAATTCATCGCGTCTC+TGG | + | chr3_1:55492663-55492682 | Msa0363300:CDS | 50.0% | |
GTTGGAGACGCATGTGATGA+TGG | + | chr3_1:55492806-55492825 | Msa0363300:CDS | 50.0% | |
TATGGATAAGCAGGTCGTCG+GGG | - | chr3_1:55492847-55492866 | None:intergenic | 50.0% | |
CTATGGATAAGCAGGTCGTC+GGG | - | chr3_1:55492848-55492867 | None:intergenic | 50.0% | |
GCAACAATACTACTGGGGCA+AGG | - | chr3_1:55493058-55493077 | None:intergenic | 50.0% | |
CATCAGAAGGCAAGACTGCC+AGG | + | chr3_1:55485731-55485750 | Msa0363300:CDS | 55.0% | |
GGCCTCAAACCAATTGGTCC+TGG | + | chr3_1:55487637-55487656 | Msa0363300:CDS | 55.0% | |
CTGTCGACGGAACGTCTTCT+GGG | - | chr3_1:55487723-55487742 | None:intergenic | 55.0% | |
ACTGTCGACGGAACGTCTTC+TGG | - | chr3_1:55487724-55487743 | None:intergenic | 55.0% | |
TTTGTGTGCCACAGAAGGCG+TGG | + | chr3_1:55488124-55488143 | Msa0363300:intron | 55.0% | |
GAAATCGGATGGCATCCGTG+AGG | + | chr3_1:55488759-55488778 | Msa0363300:intron | 55.0% | |
GCTGCTACCTCTGATGCAGT+TGG | - | chr3_1:55489613-55489632 | None:intergenic | 55.0% | |
TGCATCAGAGGTAGCAGCCT+TGG | + | chr3_1:55489615-55489634 | Msa0363300:CDS | 55.0% | |
GAGGTAGCAGCCTTGGTTGT+AGG | + | chr3_1:55489622-55489641 | Msa0363300:CDS | 55.0% | |
TGCACCGCCGACAAATCTTG+CGG | - | chr3_1:55490091-55490110 | None:intergenic | 55.0% | |
CAACCACAAATGGCCGGAGA+TGG | + | chr3_1:55490194-55490213 | Msa0363300:CDS | 55.0% | |
CAACCATCTCCGGCCATTTG+TGG | - | chr3_1:55490200-55490219 | None:intergenic | 55.0% | |
CGAGTGACTGCTGCCTTCTA+TGG | + | chr3_1:55490923-55490942 | Msa0363300:CDS | 55.0% | |
ACTGCTGCCTTCTATGGGTC+TGG | + | chr3_1:55490929-55490948 | Msa0363300:CDS | 55.0% | |
TTCGGCACCAGACCCATAGA+AGG | - | chr3_1:55490939-55490958 | None:intergenic | 55.0% | |
ACTTTGTGCCACCAGGGTCT+GGG | + | chr3_1:55491308-55491327 | Msa0363300:CDS | 55.0% | |
AATTTCTCCCCAGACCCTGG+TGG | - | chr3_1:55491319-55491338 | None:intergenic | 55.0% | |
CGGTTCCCCAAAATGATGCC+TGG | - | chr3_1:55491492-55491511 | None:intergenic | 55.0% | |
GTCCTAACAGTGGCGTCAAG+TGG | + | chr3_1:55492323-55492342 | Msa0363300:CDS | 55.0% | |
GCAGCGCTTCTTATTCCAGG+TGG | + | chr3_1:55492350-55492369 | Msa0363300:CDS | 55.0% | |
GAATGAGCAGTTCTCCCACC+TGG | - | chr3_1:55492368-55492387 | None:intergenic | 55.0% | |
GTGGGAGAACTGCTCATTCC+AGG | + | chr3_1:55492369-55492388 | Msa0363300:CDS | 55.0% | |
ACGACAACCTTGCCTCCGAA+TGG | - | chr3_1:55492572-55492591 | None:intergenic | 55.0% | |
GGAGGCAAGGTTGTCGTTCT+AGG | + | chr3_1:55492575-55492594 | Msa0363300:CDS | 55.0% | |
!! | GCAGAATGGGTATTGGGCGT+TGG | + | chr3_1:55492773-55492792 | Msa0363300:CDS | 55.0% |
!! | TGGGTATTGGGCGTTGGTGA+TGG | + | chr3_1:55492779-55492798 | Msa0363300:CDS | 55.0% |
!! | GGCGTTGGTGATGGTGTTGT+TGG | + | chr3_1:55492788-55492807 | Msa0363300:CDS | 55.0% |
CATCACCTCCACGCCTTCTG+TGG | - | chr3_1:55488135-55488154 | None:intergenic | 60.0% | |
! | CACAGAAGGCGTGGAGGTGA+TGG | + | chr3_1:55488133-55488152 | Msa0363300:intron | 60.0% |
GATTGAGGTAGGCGGGCGAA+TGG | - | chr3_1:55488495-55488514 | None:intergenic | 60.0% | |
GCACCGCCGACAAATCTTGC+GGG | - | chr3_1:55490090-55490109 | None:intergenic | 60.0% | |
CACTTTGTGCCACCAGGGTC+TGG | + | chr3_1:55491307-55491326 | Msa0363300:CDS | 60.0% | |
CTTTGTGCCACCAGGGTCTG+GGG | + | chr3_1:55491309-55491328 | Msa0363300:CDS | 60.0% | |
TTGCGCGGCCAGAAGTAGTG+TGG | + | chr3_1:55491560-55491579 | Msa0363300:CDS | 60.0% | |
GCGTCTCTGGCGTCATTGTG+AGG | + | chr3_1:55492676-55492695 | Msa0363300:CDS | 60.0% | |
! | GTGTGCCACAGAAGGCGTGG+AGG | + | chr3_1:55488127-55488146 | Msa0363300:intron | 65.0% |
AGGCAGCAGTCACTCGGTCG+TGG | - | chr3_1:55490919-55490938 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 55485694 | 55493108 | 55485694 | ID=Msa0363300;Name=Msa0363300 |
chr3_1 | mRNA | 55485694 | 55493108 | 55485694 | ID=Msa0363300-mRNA-1;Parent=Msa0363300;Name=Msa0363300-mRNA-1;_AED=0.44;_eAED=0.44;_QI=0|0|0|0.2|1|1|10|0|1449 |
chr3_1 | exon | 55485694 | 55485771 | 55485694 | ID=Msa0363300-mRNA-1:exon:10154;Parent=Msa0363300-mRNA-1 |
chr3_1 | exon | 55486243 | 55486362 | 55486243 | ID=Msa0363300-mRNA-1:exon:10155;Parent=Msa0363300-mRNA-1 |
chr3_1 | exon | 55487406 | 55487475 | 55487406 | ID=Msa0363300-mRNA-1:exon:10156;Parent=Msa0363300-mRNA-1 |
chr3_1 | exon | 55487584 | 55487772 | 55487584 | ID=Msa0363300-mRNA-1:exon:10157;Parent=Msa0363300-mRNA-1 |
chr3_1 | exon | 55487915 | 55488046 | 55487915 | ID=Msa0363300-mRNA-1:exon:10158;Parent=Msa0363300-mRNA-1 |
chr3_1 | exon | 55488138 | 55488227 | 55488138 | ID=Msa0363300-mRNA-1:exon:10159;Parent=Msa0363300-mRNA-1 |
chr3_1 | exon | 55488349 | 55488736 | 55488349 | ID=Msa0363300-mRNA-1:exon:10160;Parent=Msa0363300-mRNA-1 |
chr3_1 | exon | 55489423 | 55490348 | 55489423 | ID=Msa0363300-mRNA-1:exon:10161;Parent=Msa0363300-mRNA-1 |
chr3_1 | exon | 55490447 | 55491649 | 55490447 | ID=Msa0363300-mRNA-1:exon:10162;Parent=Msa0363300-mRNA-1 |
chr3_1 | exon | 55491955 | 55493108 | 55491955 | ID=Msa0363300-mRNA-1:exon:10163;Parent=Msa0363300-mRNA-1 |
chr3_1 | CDS | 55485694 | 55485771 | 55485694 | ID=Msa0363300-mRNA-1:cds;Parent=Msa0363300-mRNA-1 |
chr3_1 | CDS | 55486243 | 55486362 | 55486243 | ID=Msa0363300-mRNA-1:cds;Parent=Msa0363300-mRNA-1 |
chr3_1 | CDS | 55487406 | 55487475 | 55487406 | ID=Msa0363300-mRNA-1:cds;Parent=Msa0363300-mRNA-1 |
chr3_1 | CDS | 55487584 | 55487772 | 55487584 | ID=Msa0363300-mRNA-1:cds;Parent=Msa0363300-mRNA-1 |
chr3_1 | CDS | 55487915 | 55488046 | 55487915 | ID=Msa0363300-mRNA-1:cds;Parent=Msa0363300-mRNA-1 |
chr3_1 | CDS | 55488138 | 55488227 | 55488138 | ID=Msa0363300-mRNA-1:cds;Parent=Msa0363300-mRNA-1 |
chr3_1 | CDS | 55488349 | 55488736 | 55488349 | ID=Msa0363300-mRNA-1:cds;Parent=Msa0363300-mRNA-1 |
chr3_1 | CDS | 55489423 | 55490348 | 55489423 | ID=Msa0363300-mRNA-1:cds;Parent=Msa0363300-mRNA-1 |
chr3_1 | CDS | 55490447 | 55491649 | 55490447 | ID=Msa0363300-mRNA-1:cds;Parent=Msa0363300-mRNA-1 |
chr3_1 | CDS | 55491955 | 55493108 | 55491955 | ID=Msa0363300-mRNA-1:cds;Parent=Msa0363300-mRNA-1 |
Gene Sequence |
Protein sequence |