AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0363300


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0363300 MtrunA17_Chr7g0269651 57.859 878 311 9 109 960 142 986 0.0 1058
Msa0363300 MtrunA17_Chr3g0101871 48.746 917 447 5 228 1123 186 1100 0.0 916
Msa0363300 MtrunA17_Chr1g0206501 67.470 498 156 1 909 1400 1 498 0.0 731
Msa0363300 MtrunA17_Chr1g0173671 52.212 678 271 6 112 746 92 759 0.0 728
Msa0363300 MtrunA17_Chr1g0206491 59.750 559 173 10 109 637 40 576 0.0 655
Msa0363300 MtrunA17_Chr1g0173681 63.905 338 118 2 770 1104 2 338 4.28e-151 462
Msa0363300 MtrunA17_Chr7g0270391 46.929 407 211 1 666 1067 1 407 1.34e-126 400
Msa0363300 MtrunA17_Chr3g0101861 48.173 301 155 1 1150 1449 1 301 3.83e-92 306
Msa0363300 MtrunA17_Chr3g0093501 50.534 281 127 2 588 868 1 269 2.08e-89 291
Msa0363300 MtrunA17_Chr7g0269661 60.699 229 89 1 998 1226 1 228 9.00e-85 276
Msa0363300 MtrunA17_Chr7g0269671 58.937 207 78 2 1249 1448 1 207 3.37e-73 248
Msa0363300 MtrunA17_Chr1g0173691 57.005 207 83 1 1249 1449 1 207 5.63e-73 248
Msa0363300 MtrunA17_Chr5g0400991 54.913 173 78 0 399 571 2 174 1.62e-60 205
Msa0363300 MtrunA17_Chr4g0022121 80.000 85 17 0 1064 1148 39 123 1.79e-37 137
Msa0363300 MtrunA17_Chr6g0472831 46.491 114 61 0 1321 1434 1 114 2.58e-26 109
Msa0363300 MtrunA17_Chr3g0133361 44.737 114 63 0 1321 1434 1 114 2.80e-25 107
Msa0363300 MtrunA17_Chr4g0021841 45.556 90 48 1 1085 1174 2 90 1.52e-18 82.0
Msa0363300 MtrunA17_Chr5g0396581 92.683 41 3 0 26 66 65 105 6.39e-15 78.6
Msa0363300 MtrunA17_Chr5g0396571 82.927 41 7 0 26 66 22 62 1.12e-14 77.4
Msa0363300 MtrunA17_Chr3g0096361 53.125 64 30 0 1100 1163 1 64 8.58e-14 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 291 sgRNAs with CRISPR-Local

Find 471 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATTGCTGCAACAACTTTC+TGG 0.117713 3_1:-55489911 None:intergenic
AACTATAAAGCTACACTTAT+TGG 0.158406 3_1:+55489552 Msa0363300:CDS
AATTCACCGTGTACGATAAA+TGG 0.172458 3_1:+55490650 Msa0363300:CDS
TGCACCATTCAACATTAATA+TGG 0.183886 3_1:-55490847 None:intergenic
CATCAAATACAACTCCTTTA+AGG 0.187632 3_1:+55491408 Msa0363300:CDS
ACTGTCGACGGAACGTCTTC+TGG 0.202438 3_1:-55487721 None:intergenic
ACTTCCTCATGCTCATATTT+TGG 0.203652 3_1:+55490478 Msa0363300:CDS
CGAGTGACTGCTGCCTTCTA+TGG 0.206221 3_1:+55490923 Msa0363300:CDS
AGCTACACTTATTGGGTAAA+AGG 0.208154 3_1:+55489560 Msa0363300:CDS
CCATTAACCAGGCATCATTT+TGG 0.218196 3_1:+55491482 Msa0363300:CDS
TACGAAGCAAGTCTCCTTAA+AGG 0.224212 3_1:-55491422 None:intergenic
AATTGCCCCAATGGGCTTAA+TGG 0.225168 3_1:-55492440 None:intergenic
ATCCAAGTTCAGTGGGAAAA+AGG 0.226602 3_1:+55490055 Msa0363300:CDS
CACTTTGTGCCACCAGGGTC+TGG 0.227921 3_1:+55491307 Msa0363300:CDS
AAATATTTACGACGCTATAA+TGG 0.231206 3_1:+55492187 Msa0363300:CDS
AAGGAACTCGCTGCTGAATT+TGG 0.234301 3_1:+55486318 Msa0363300:CDS
ACGCAAGAGAACAAAATTAT+TGG 0.237314 3_1:+55488187 Msa0363300:CDS
AAGGAGACTTGCTTCGTATT+AGG 0.247582 3_1:+55491427 Msa0363300:CDS
ATGTCTTGTCTGGTTCCTTT+AGG 0.255168 3_1:-55492629 None:intergenic
CCAAAATGATGCCTGGTTAA+TGG 0.267296 3_1:-55491482 None:intergenic
CGGAAATGGAATCCGCTAAA+AGG 0.285567 3_1:+55487436 Msa0363300:CDS
AAAATTCTGCTCACCAAGTT+TGG 0.290465 3_1:-55490258 None:intergenic
GCCCTTTACATAATTCAATA+AGG 0.294470 3_1:-55491350 None:intergenic
GGAGGCAAGGTTGTCGTTCT+AGG 0.295040 3_1:+55492575 Msa0363300:CDS
TGGAAATTTACCAACTATAT+CGG 0.302260 3_1:-55488216 None:intergenic
GTAAATGTAATGAAAATATT+AGG 0.303584 3_1:-55490168 None:intergenic
CGTCAACAATGAATGGTATA+TGG 0.303596 3_1:-55492394 None:intergenic
CTGCATGTGAAGCTGTTTGC+AGG 0.307679 3_1:+55491002 Msa0363300:CDS
GATGCAAAGGATCTCACTTA+TGG 0.309099 3_1:+55491202 Msa0363300:CDS
TTCATATTATGCAAAATAGA+AGG 0.319916 3_1:-55492908 None:intergenic
TTATCATTGTTTATCGGAAA+TGG 0.323293 3_1:+55487422 Msa0363300:CDS
TTTATAGCGACATCAGTTCT+TGG 0.328376 3_1:-55492059 None:intergenic
AGGCTGTTGATCGTAGTTTC+CGG 0.329905 3_1:+55492525 Msa0363300:CDS
TCACCGCGAGAGAATATTAA+TGG 0.330034 3_1:-55489751 None:intergenic
AGCATCAATTGTGGGTTGTA+TGG 0.333752 3_1:-55490812 None:intergenic
ATGCAATGGCAATATGTTCT+TGG 0.344561 3_1:+55490136 Msa0363300:CDS
TCGAGTCTTGGCGATTAAAA+TGG 0.344597 3_1:+55489956 Msa0363300:CDS
ACTATAAAGCTACACTTATT+GGG 0.345799 3_1:+55489553 Msa0363300:CDS
ATTCAGAATATTTCGATGTT+GGG 0.346326 3_1:+55488343 Msa0363300:intron
TCATCATCTTCAAACATAAT+AGG 0.348969 3_1:-55491097 None:intergenic
TGGATGAACAATTCGAAAAT+CGG 0.350755 3_1:-55490513 None:intergenic
TCGTTCTAGGTGATGACTTT+CGG 0.356025 3_1:+55492588 Msa0363300:CDS
CGCAATATCAATTGCCCCAA+TGG 0.356609 3_1:-55492449 None:intergenic
TGTTAGGACAATTTGTCCTT+TGG 0.359725 3_1:-55492309 None:intergenic
AATTCCCATTGAAATTTACT+TGG 0.361993 3_1:+55491227 Msa0363300:CDS
GAACACACAAGATGCGTCTT+TGG 0.362189 3_1:-55491624 None:intergenic
ACTTTGTGCCACCAGGGTCT+GGG 0.366311 3_1:+55491308 Msa0363300:CDS
GTCCTGGAAAATATAGTCTA+AGG 0.366485 3_1:+55487653 Msa0363300:CDS
TAACATGATCACCTGAACTA+TGG 0.368348 3_1:-55492862 None:intergenic
GAATTTGCAGAATGGGTATT+GGG 0.369403 3_1:+55492767 Msa0363300:CDS
TTAGGTTGATCCCCTGGTTT+AGG 0.370037 3_1:-55488702 None:intergenic
CCATTGTCTTTATGCGTTGA+TGG 0.370394 3_1:-55487592 None:intergenic
GCTACACTTATTGGGTAAAA+GGG 0.371013 3_1:+55489561 Msa0363300:CDS
GGCTGTTGATCGTAGTTTCC+GGG 0.371427 3_1:+55492526 Msa0363300:CDS
AGACGCATCTTGTGTGTTCC+AGG 0.371664 3_1:+55491628 Msa0363300:CDS
AATGGTGTAACTATTCAAAA+AGG 0.373577 3_1:+55490758 Msa0363300:CDS
CTGTCGACGGAACGTCTTCT+GGG 0.375065 3_1:-55487720 None:intergenic
ATTCATTTGTTAAGTCATAT+AGG 0.375995 3_1:+55489494 Msa0363300:CDS
TGCGTTTATTATGTCTTGTC+TGG 0.381907 3_1:-55492639 None:intergenic
AATATTTACGACGCTATAAT+GGG 0.383647 3_1:+55492188 Msa0363300:CDS
TAGGCAGCAAACTACCGATT+TGG 0.385555 3_1:-55488683 None:intergenic
GTGGGAGAACTGCTCATTCC+AGG 0.385556 3_1:+55492369 Msa0363300:CDS
TTGTCCCTTCTTCTGTAAAC+CGG 0.387490 3_1:-55490737 None:intergenic
ACCAAGTTTGGCCTATCTGC+TGG 0.391247 3_1:-55490246 None:intergenic
CATTTACATGCAACCACAAA+TGG 0.394578 3_1:+55490184 Msa0363300:CDS
ATAGCAGCGCTTCTTATTCC+AGG 0.394796 3_1:+55492347 Msa0363300:CDS
GTTAAAAGAATTTGCAGAAT+GGG 0.396084 3_1:+55492760 Msa0363300:CDS
GAGGTAGCAGCCTTGGTTGT+AGG 0.396690 3_1:+55489622 Msa0363300:CDS
TTTAATTTCATCGCAAGATT+CGG 0.396699 3_1:-55490954 None:intergenic
CCAGTAGTATTGTTGCTAAC+AGG 0.396819 3_1:+55493062 Msa0363300:CDS
GGCGTTGGTGATGGTGTTGT+TGG 0.400882 3_1:+55492788 Msa0363300:CDS
ATTATCGTAAGTGTATTGAT+TGG 0.402274 3_1:-55487746 None:intergenic
AAACAATGCTTGTGCATCAT+TGG 0.403585 3_1:-55492500 None:intergenic
ACCTTATTGAATTATGTAAA+GGG 0.405361 3_1:+55491349 Msa0363300:CDS
GTCTTGGTGACCATCTGTGT+TGG 0.406800 3_1:-55491258 None:intergenic
CAAGTATTGTTGACGAGTTA+AGG 0.409916 3_1:+55489452 Msa0363300:CDS
ATGCAAAGGATCTCACTTAT+GGG 0.415415 3_1:+55491203 Msa0363300:CDS
CTATGGATAAGCAGGTCGTC+GGG 0.415715 3_1:-55492845 None:intergenic
AGAATTTGCAGAATGGGTAT+TGG 0.416811 3_1:+55492766 Msa0363300:CDS
GCTTTCCAAGTAAATTTCAA+TGG 0.416843 3_1:-55491232 None:intergenic
AACCTACCATAATCATTGTC+AGG 0.417751 3_1:-55488031 None:intergenic
ATCATTGTTGAGTGTGTGTC+AGG 0.418698 3_1:+55489676 Msa0363300:CDS
GCACCATTCAACATTAATAT+GGG 0.418957 3_1:-55490846 None:intergenic
ATCATTTAATTCAAGAGATA+CGG 0.420854 3_1:+55490295 Msa0363300:CDS
TGAAGATGATGACGACTTAG+AGG 0.422834 3_1:+55491108 Msa0363300:CDS
ATTGAACCATTAAGCCCATT+GGG 0.424386 3_1:+55492434 Msa0363300:CDS
CACATGGTCCATGTATCATA+AGG 0.426368 3_1:-55490613 None:intergenic
TATTCAGAATATTTCGATGT+TGG 0.427073 3_1:+55488342 Msa0363300:intron
TTGCTTCGTATTAGGTTTGT+TGG 0.427145 3_1:+55491435 Msa0363300:CDS
ATTATCTTGTCAATATTACT+TGG 0.427339 3_1:-55490533 None:intergenic
CGCAATTAAACCAATCATGC+GGG 0.427963 3_1:-55487982 None:intergenic
CAACCATCTCCGGCCATTTG+TGG 0.428115 3_1:-55490197 None:intergenic
AATAAGTGTAGCTTTATAGT+TGG 0.429003 3_1:-55489550 None:intergenic
GCATCAATTCATCGCGTCTC+TGG 0.429167 3_1:+55492663 Msa0363300:CDS
TAATTTCATCATAAGAAGTT+GGG 0.431524 3_1:-55491372 None:intergenic
ATACGGAATGGAAAGATATT+CGG 0.433194 3_1:+55490312 Msa0363300:CDS
CTTTCCAAGTAAATTTCAAT+GGG 0.434244 3_1:-55491231 None:intergenic
TTTAAGTATGCAACCATCTC+CGG 0.435804 3_1:-55490207 None:intergenic
TTAATTTCATCATAAGAAGT+TGG 0.441611 3_1:-55491373 None:intergenic
TGGGACAACGTATCTATTAT+CGG 0.444364 3_1:-55490792 None:intergenic
TCTTGGTGACCATCTGTGTT+GGG 0.445785 3_1:-55491257 None:intergenic
GACCTGCTTATCCATAGTTC+AGG 0.446255 3_1:+55492851 Msa0363300:CDS
CACCTTATTGAATTATGTAA+AGG 0.446904 3_1:+55491348 Msa0363300:CDS
CAAATATGTTCTTTCTTCAT+CGG 0.447988 3_1:-55493020 None:intergenic
GTGTTACCCGCAAGATTTGT+CGG 0.448148 3_1:+55490081 Msa0363300:CDS
ACTGCTGCCTTCTATGGGTC+TGG 0.450214 3_1:+55490929 Msa0363300:CDS
CATTGAACCATTAAGCCCAT+TGG 0.452837 3_1:+55492433 Msa0363300:CDS
ATATACAATTGTGCAAACTT+AGG 0.454014 3_1:-55488720 None:intergenic
ATGTTCGCCTTCACTTCAAT+TGG 0.455306 3_1:+55488588 Msa0363300:CDS
CATTAATGTGGTATGAAGAA+AGG 0.457307 3_1:+55488397 Msa0363300:CDS
CCTGTTAGCAACAATACTAC+TGG 0.458184 3_1:-55493062 None:intergenic
AGTTGCTGTTCATAGAGTTA+AGG 0.458867 3_1:+55486299 Msa0363300:CDS
TTGGTTGAATCCGATATAGT+TGG 0.459052 3_1:+55488206 Msa0363300:CDS
GCACCGCCGACAAATCTTGC+GGG 0.459823 3_1:-55490087 None:intergenic
TGCATCAGAGGTAGCAGCCT+TGG 0.461382 3_1:+55489615 Msa0363300:CDS
CAATGGGCTTAATGGTTCAA+TGG 0.461563 3_1:-55492432 None:intergenic
GCAATATCAATTGCCCCAAT+GGG 0.462160 3_1:-55492448 None:intergenic
ATTCACCGTGTACGATAAAT+GGG 0.462619 3_1:+55490651 Msa0363300:CDS
TAAATTTCAGCATCAATTGT+GGG 0.463524 3_1:-55490820 None:intergenic
TTATATGGGTACGGTGGTAC+AGG 0.463896 3_1:+55492245 Msa0363300:CDS
TATGGTGTGTGAACATCATC+AGG 0.464692 3_1:-55493085 None:intergenic
AGGATTCACTTTGTGCCACC+AGG 0.466688 3_1:+55491301 Msa0363300:CDS
TGAAACACTATCGGATGAAT+CGG 0.468509 3_1:+55487940 Msa0363300:CDS
GATGTCGCTATAAATAGTGC+TGG 0.468862 3_1:+55492068 Msa0363300:CDS
GGATGAACAATTCGAAAATC+GGG 0.469349 3_1:-55490512 None:intergenic
ATGAAAACTCAATCGTTCTT+CGG 0.470846 3_1:-55491059 None:intergenic
TGGGTATTGGGCGTTGGTGA+TGG 0.474020 3_1:+55492779 Msa0363300:CDS
CTGGTTCCTTTAGGAACCAC+TGG 0.474817 3_1:-55492620 None:intergenic
GCATCAATTGTGGGTTGTAT+GGG 0.475140 3_1:-55490811 None:intergenic
TTCCAGGACCAATTGGTTTG+AGG 0.475150 3_1:-55487639 None:intergenic
CAACAAAGATTCATTGAAAG+AGG 0.478063 3_1:+55492124 Msa0363300:CDS
ACAATTTGAAACCAGCAGAT+AGG 0.481744 3_1:+55490235 Msa0363300:CDS
GGAACCGCGATATGTTTGTA+AGG 0.483067 3_1:+55488365 Msa0363300:CDS
AAAGCACCTTATGAAAATTG+AGG 0.484142 3_1:-55486347 None:intergenic
ATTAATGTGGTATGAAGAAA+GGG 0.485074 3_1:+55488398 Msa0363300:CDS
TATTGATGCTGACGGTTACC+CGG 0.486173 3_1:+55490718 Msa0363300:CDS
ACCAGCAGATAGGCCAAACT+TGG 0.487475 3_1:+55490245 Msa0363300:CDS
AAAGTAGGCCTCAAACCAAT+TGG 0.490108 3_1:+55487631 Msa0363300:CDS
GGCCTCAAACCAATTGGTCC+TGG 0.490254 3_1:+55487637 Msa0363300:CDS
AAACATTCGTCAACAATGAA+TGG 0.491708 3_1:-55492401 None:intergenic
ATGCAGCACATAGAAAATTC+TGG 0.492729 3_1:-55488447 None:intergenic
ATGCCCATATTAATGTTGAA+TGG 0.494560 3_1:+55490843 Msa0363300:CDS
GTTACCCGGTTTACAGAAGA+AGG 0.494778 3_1:+55490732 Msa0363300:CDS
GCAAACTTAGGTTGATCCCC+TGG 0.495421 3_1:-55488708 None:intergenic
CATCAGAAGGCAAGACTGCC+AGG 0.495430 3_1:+55485731 Msa0363300:CDS
CTATGTGCTGCATGCAAGGA+AGG 0.495549 3_1:+55488457 Msa0363300:CDS
GATGTTCCTGACAATGATTA+TGG 0.495982 3_1:+55488025 Msa0363300:CDS
GGAGAAAATTACCACCAAAT+CGG 0.496564 3_1:+55488669 Msa0363300:CDS
CTTTGTGCCACCAGGGTCTG+GGG 0.496643 3_1:+55491309 Msa0363300:CDS
TTCGGCACCAGACCCATAGA+AGG 0.496715 3_1:-55490936 None:intergenic
TGCGTACAAATTGCAACAAA+GGG 0.498438 3_1:+55489861 Msa0363300:CDS
AGTAGTGTGGTCTAAAACAT+GGG 0.500293 3_1:+55491573 Msa0363300:CDS
TACCACTTGACGCCACTGTT+AGG 0.500493 3_1:-55492325 None:intergenic
GTCTCATCCCTTATGATACA+TGG 0.500691 3_1:+55490605 Msa0363300:CDS
GAGTGACTGCTGCCTTCTAT+GGG 0.502104 3_1:+55490924 Msa0363300:CDS
TTTACTCGGCGGTTTCAAAA+CGG 0.504395 3_1:+55486245 Msa0363300:CDS
CACCTGAACTATGGATAAGC+AGG 0.508232 3_1:-55492853 None:intergenic
CTTTAAAGTACAACTCATGA+AGG 0.509587 3_1:-55488515 None:intergenic
ACCGTGCAAAAGTCTCATAT+TGG 0.511284 3_1:-55492714 None:intergenic
ATGATCTACATGACCATGGC+TGG 0.511421 3_1:+55485679 None:intergenic
ACATGGTCCATGTATCATAA+GGG 0.512793 3_1:-55490612 None:intergenic
CAACAAAGGGTCGATGATCA+AGG 0.512872 3_1:+55489874 Msa0363300:CDS
CACAGAAGGCGTGGAGGTGA+TGG 0.513279 3_1:+55488133 Msa0363300:intron
ACGATGCAGCGGATTTCGAA+AGG 0.513352 3_1:+55489650 Msa0363300:CDS
CTGTTAGCAACAATACTACT+GGG 0.513490 3_1:-55493061 None:intergenic
CGCTATAATGGGCAGAGTTG+AGG 0.513510 3_1:+55492199 Msa0363300:CDS
ATATTCTCTCGCGGTGAAGA+CGG 0.515793 3_1:+55489757 Msa0363300:CDS
GAATCAAAATTACATACCGT+TGG 0.518650 3_1:-55487466 None:intergenic
GGTAGTTTGCTGCCTAAACC+AGG 0.519639 3_1:+55488690 Msa0363300:CDS
TTAAATTTCAGCATCAATTG+TGG 0.520746 3_1:-55490821 None:intergenic
ATTTGTTAAGTCATATAGGT+TGG 0.523007 3_1:+55489498 Msa0363300:CDS
TTCAGAATATTTCGATGTTG+GGG 0.523920 3_1:+55488344 Msa0363300:intron
ATTCTACCAGTGGTTCCTAA+AGG 0.523938 3_1:+55492614 Msa0363300:CDS
GATTGAGGTAGGCGGGCGAA+TGG 0.525861 3_1:-55488492 None:intergenic
ACTTTACCGTTAGATAAAGT+AGG 0.526943 3_1:+55487616 Msa0363300:CDS
AGTTAAAAGAATTTGCAGAA+TGG 0.529447 3_1:+55492759 Msa0363300:CDS
CGGTTCCCCAAAATGATGCC+TGG 0.532174 3_1:-55491489 None:intergenic
TGAGACAATATTGTAGAGCT+CGG 0.532339 3_1:-55490588 None:intergenic
GATTTAGCATGATCGAGTCT+TGG 0.532940 3_1:+55489944 Msa0363300:CDS
ACTGATACACCTCTTTGTCT+TGG 0.533203 3_1:-55491274 None:intergenic
ATGGCAATATGTTCTTGGAT+TGG 0.533207 3_1:+55490141 Msa0363300:CDS
TGCAAAGCAGACATTCCATT+CGG 0.535989 3_1:+55492554 Msa0363300:CDS
CATTGAAAGAGGAGCATGAT+CGG 0.537151 3_1:+55492135 Msa0363300:CDS
AGGCAGCAGTCACTCGGTCG+TGG 0.537157 3_1:-55490916 None:intergenic
TACAACTCATGAAGGGATTG+AGG 0.538566 3_1:-55488507 None:intergenic
ATGAAGGGATTGAGGTAGGC+GGG 0.539866 3_1:-55488499 None:intergenic
GAGACAATATTGTAGAGCTC+GGG 0.540168 3_1:-55490587 None:intergenic
CAACCACAAATGGCCGGAGA+TGG 0.542312 3_1:+55490194 Msa0363300:CDS
TTAATTCAAGAGATACGGAA+TGG 0.542389 3_1:+55490300 Msa0363300:CDS
GTTTATTGATGCCATTAACC+AGG 0.546453 3_1:+55491471 Msa0363300:CDS
CATAGAAGGCAGCAGTCACT+CGG 0.546457 3_1:-55490922 None:intergenic
CTTTGCACCAATTGAAGTGA+AGG 0.549187 3_1:-55488595 None:intergenic
CAATACACTTACGATAATGA+AGG 0.553963 3_1:+55487751 Msa0363300:CDS
GCAGCAAACTACCGATTTGG+TGG 0.554019 3_1:-55488680 None:intergenic
TTGCGTACAAATTGCAACAA+AGG 0.555756 3_1:+55489860 Msa0363300:CDS
TGTCCCTTCTTCTGTAAACC+GGG 0.555849 3_1:-55490736 None:intergenic
TTAATGGATATTGTAGTGCC+AGG 0.556394 3_1:-55489735 None:intergenic
AGACATTCCATTCGGAGGCA+AGG 0.558018 3_1:+55492562 Msa0363300:CDS
CGATGCAGCGGATTTCGAAA+GGG 0.558376 3_1:+55489651 Msa0363300:CDS
GAATGAGCAGTTCTCCCACC+TGG 0.558929 3_1:-55492365 None:intergenic
GTTGGAGACGCATGTGATGA+TGG 0.563137 3_1:+55492806 Msa0363300:CDS
TGTTAGAGCTGATATGTACA+AGG 0.565157 3_1:+55489999 Msa0363300:CDS
AAAATATAGTCTAAGGCATG+TGG 0.566278 3_1:+55487660 Msa0363300:CDS
AATGAATGGTATATGGAACC+TGG 0.566866 3_1:-55492387 None:intergenic
AAACTCAATCGTTCTTCGGA+AGG 0.567116 3_1:-55491055 None:intergenic
CACTTCCCATTTATCGTACA+CGG 0.569074 3_1:-55490656 None:intergenic
TTCTTGGCATAGACGGATAG+TGG 0.569244 3_1:-55492043 None:intergenic
TTGAGGCCTACTTTATCTAA+CGG 0.569291 3_1:-55487622 None:intergenic
TAAAATTTCTCCCCAGACCC+TGG 0.570893 3_1:-55491319 None:intergenic
TTTGTTCAAGTACGTTAACA+AGG 0.574322 3_1:+55490892 Msa0363300:CDS
GCTAAAAGGCGCAAAACCAA+CGG 0.578095 3_1:+55487450 Msa0363300:CDS
CAAGATATATGCCGATGCAA+AGG 0.578545 3_1:+55491189 Msa0363300:CDS
AAGTAGTGTGGTCTAAAACA+TGG 0.580082 3_1:+55491572 Msa0363300:CDS
ACTATGGATAAGCAGGTCGT+CGG 0.581735 3_1:-55492846 None:intergenic
GTAACCGTCAGCATCAATAA+CGG 0.582214 3_1:-55490714 None:intergenic
TCAAAATTATCAAGATGCAA+TGG 0.582513 3_1:+55490122 Msa0363300:CDS
ACGACAACCTTGCCTCCGAA+TGG 0.582860 3_1:-55492569 None:intergenic
GCAGAATGGGTATTGGGCGT+TGG 0.583408 3_1:+55492773 Msa0363300:CDS
AGACAAAGAGGTGTATCAGT+TGG 0.586490 3_1:+55491277 Msa0363300:CDS
GCGTCTCTGGCGTCATTGTG+AGG 0.587235 3_1:+55492676 Msa0363300:CDS
TCATATTATGCAAAATAGAA+GGG 0.587518 3_1:-55492907 None:intergenic
TACATGCAACCACAAATGGC+CGG 0.588331 3_1:+55490188 Msa0363300:CDS
CTACACTTATTGGGTAAAAG+GGG 0.592468 3_1:+55489562 Msa0363300:CDS
TCATCTGCATTGAGATCCAA+AGG 0.592661 3_1:+55492293 Msa0363300:CDS
CGAGAACAATCCAAGTTCAG+TGG 0.592900 3_1:+55490047 Msa0363300:CDS
AAGCGATAGTGAAACACTAT+CGG 0.593862 3_1:+55487931 Msa0363300:CDS
TTTAAAGTACAACTCATGAA+GGG 0.595122 3_1:-55488514 None:intergenic
GTCCTAACAGTGGCGTCAAG+TGG 0.595498 3_1:+55492323 Msa0363300:CDS
CTTTCGGCAAATTCTACCAG+TGG 0.596038 3_1:+55492604 Msa0363300:CDS
TAATGCACCAACTGCATCAG+AGG 0.596608 3_1:+55489603 Msa0363300:CDS
AAAGAGGTGTATCAGTTGGA+AGG 0.598040 3_1:+55491281 Msa0363300:CDS
GCTGCTACCTCTGATGCAGT+TGG 0.599510 3_1:-55489610 None:intergenic
GGCAAGATATATACCAGCCA+TGG 0.599549 3_1:-55485692 None:intergenic
ATGTCGCTATAAATAGTGCT+GGG 0.601450 3_1:+55492069 Msa0363300:CDS
TGCTTACAAATCAATTTGCG+CGG 0.602367 3_1:+55491545 Msa0363300:CDS
AAATATAGTCTAAGGCATGT+GGG 0.602830 3_1:+55487661 Msa0363300:CDS
CAATTCGAAAATCGGGATGG+AGG 0.603717 3_1:-55490505 None:intergenic
GAGAACAATCCAAGTTCAGT+GGG 0.609968 3_1:+55490048 Msa0363300:CDS
GGAAAGCATCCCAACACAGA+TGG 0.611180 3_1:+55491248 Msa0363300:CDS
ACTATCGGATGAATCGGATG+TGG 0.611682 3_1:+55487946 Msa0363300:CDS
ATCGTAATCACCTACAACCA+AGG 0.611870 3_1:-55489632 None:intergenic
ATATTCGGCAAAGTCAAAGC+AGG 0.612722 3_1:+55490327 Msa0363300:CDS
TGTGCTGAAATTCCTGACAA+AGG 0.615135 3_1:+55490557 Msa0363300:CDS
CCATCAACGCATAAAGACAA+TGG 0.615702 3_1:+55487592 Msa0363300:CDS
AACACCAAAATATGAGCATG+AGG 0.617891 3_1:-55490482 None:intergenic
ACATCAGTTCTTGGCATAGA+CGG 0.618006 3_1:-55492050 None:intergenic
TGTCTGCTTTGCATACATCC+CGG 0.618314 3_1:-55492544 None:intergenic
ACTCATGAAGGGATTGAGGT+AGG 0.618986 3_1:-55488503 None:intergenic
TGCACCGCCGACAAATCTTG+CGG 0.622234 3_1:-55490088 None:intergenic
CAGCGCTTCTTATTCCAGGT+GGG 0.623881 3_1:+55492351 Msa0363300:CDS
TTTGTGTGCCACAGAAGGCG+TGG 0.625119 3_1:+55488124 Msa0363300:intron
GCAGCGCTTCTTATTCCAGG+TGG 0.626528 3_1:+55492350 Msa0363300:CDS
CAATTAAACCAATCATGCGG+GGG 0.628888 3_1:-55487980 None:intergenic
AGGATTGCAACGCATTAATG+TGG 0.630790 3_1:+55488385 Msa0363300:CDS
TTGTTCAAGTACGTTAACAA+GGG 0.631888 3_1:+55490893 Msa0363300:CDS
AGAGTTGAGGCAAATAAACA+AGG 0.635203 3_1:+55492212 Msa0363300:CDS
GGATTCACTTTGTGCCACCA+GGG 0.635455 3_1:+55491302 Msa0363300:CDS
GCGCAATTAAACCAATCATG+CGG 0.636527 3_1:-55487983 None:intergenic
TAATCTTCTCATAAAATCAG+CGG 0.637807 3_1:-55491509 None:intergenic
TGCAAAGGATCTCACTTATG+GGG 0.637939 3_1:+55491204 Msa0363300:CDS
TGTAGGTGATTACGATGCAG+CGG 0.638628 3_1:+55489639 Msa0363300:CDS
GTAGTTTGCTGCCTAAACCA+GGG 0.642560 3_1:+55488691 Msa0363300:CDS
ATAAGTGAGATCCTTTGCAT+CGG 0.645503 3_1:-55491200 None:intergenic
AGATGGTCACCAAGACAAAG+AGG 0.646038 3_1:+55491265 Msa0363300:CDS
TAGTTTGCTGCCTAAACCAG+GGG 0.652223 3_1:+55488692 Msa0363300:CDS
GAACAATTCGAAAATCGGGA+TGG 0.652657 3_1:-55490508 None:intergenic
GCAATTAAACCAATCATGCG+GGG 0.656991 3_1:-55487981 None:intergenic
CAATCCTTACAAACATATCG+CGG 0.661003 3_1:-55488369 None:intergenic
TTACCCGGTTTACAGAAGAA+GGG 0.661564 3_1:+55490733 Msa0363300:CDS
CATGTGGGAAATCAAAGTAG+TGG 0.662621 3_1:+55487676 Msa0363300:CDS
TTGAACCATTAAGCCCATTG+GGG 0.663700 3_1:+55492435 Msa0363300:CDS
AAAGCAGACATTCCATTCGG+AGG 0.668010 3_1:+55492557 Msa0363300:CDS
AGCACCGTTATTGATGCTGA+CGG 0.670089 3_1:+55490710 Msa0363300:CDS
CATGAAGGGATTGAGGTAGG+CGG 0.670541 3_1:-55488500 None:intergenic
GTTAGAGCTGATATGTACAA+GGG 0.673299 3_1:+55490000 Msa0363300:CDS
TATGGATAAGCAGGTCGTCG+GGG 0.679209 3_1:-55492844 None:intergenic
GTACAAGGGATTATATGAAG+CGG 0.680577 3_1:+55490014 Msa0363300:CDS
TTGCGCGGCCAGAAGTAGTG+TGG 0.682833 3_1:+55491560 Msa0363300:CDS
GTAAAAGGGGATACGATGGT+CGG 0.685345 3_1:+55489575 Msa0363300:CDS
GCAACAATACTACTGGGGCA+AGG 0.686780 3_1:-55493055 None:intergenic
GTTTACAGAAGAAGGGACAA+TGG 0.687862 3_1:+55490740 Msa0363300:CDS
TTGGGTAAAAGGGGATACGA+TGG 0.688031 3_1:+55489571 Msa0363300:CDS
AGGACAAATTGTCCTAACAG+TGG 0.702943 3_1:+55492313 Msa0363300:CDS
GAAAAGCTACAACAGTCCCA+CGG 0.704816 3_1:+55492005 Msa0363300:CDS
TATCCATTAATATTCTCTCG+CGG 0.706728 3_1:+55489748 Msa0363300:CDS
AATTTCTCCCCAGACCCTGG+TGG 0.720594 3_1:-55491316 None:intergenic
TTACCCGCAAGATTTGTCGG+CGG 0.728638 3_1:+55490084 Msa0363300:CDS
TATTGATTGGAAACTGTCGA+CGG 0.736783 3_1:-55487733 None:intergenic
TGTTAGCAACAATACTACTG+GGG 0.736812 3_1:-55493060 None:intergenic
CTTATGATACATGGACCATG+TGG 0.749107 3_1:+55490614 Msa0363300:CDS
GTGTGCCACAGAAGGCGTGG+AGG 0.749358 3_1:+55488127 Msa0363300:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATATTTTTTTTTGGAAT+AGG + chr3_1:55486604-55486623 Msa0363300:intron 10.0%
!!! TTTGTAAATTTTTTCATTAT+AGG - chr3_1:55487814-55487833 None:intergenic 10.0%
!!! TAGTTTTTTTTTAAATTGAT+TGG + chr3_1:55488274-55488293 Msa0363300:intron 10.0%
!!! TTTTTTTATCATTTTCATTA+GGG - chr3_1:55489203-55489222 None:intergenic 10.0%
!!! TTTTTTTTATCATTTTCATT+AGG - chr3_1:55489204-55489223 None:intergenic 10.0%
!!! AAGGTTTATTTTTTTTATAT+GGG + chr3_1:55492231-55492250 Msa0363300:CDS 10.0%
!! AATCCAATTAATCAAAATAA+TGG + chr3_1:55485835-55485854 Msa0363300:intron 15.0%
!!! ATTGATATTTTTCTGAATTT+AGG + chr3_1:55486463-55486482 Msa0363300:intron 15.0%
!!! TCCTTGATAATATTTTTTTT+TGG + chr3_1:55486598-55486617 Msa0363300:intron 15.0%
!! TCCAAAAAAAAATATTATCA+AGG - chr3_1:55486602-55486621 None:intergenic 15.0%
!!! ATTTTATGTAAATTGTTTAG+AGG + chr3_1:55486862-55486881 Msa0363300:intron 15.0%
!!! TTTTATGTAAATTGTTTAGA+GGG + chr3_1:55486863-55486882 Msa0363300:intron 15.0%
!!! ATGTTGTTCTTTTAAATTTT+TGG + chr3_1:55486978-55486997 Msa0363300:intron 15.0%
!!! TGTTTTTTATCATTGTTTAT+CGG + chr3_1:55487416-55487435 Msa0363300:CDS 15.0%
!!! AGTTTTTATTACTATAAAAG+TGG + chr3_1:55487520-55487539 Msa0363300:intron 15.0%
!! AATAATAAATTTGAGAGAAT+CGG - chr3_1:55488252-55488271 None:intergenic 15.0%
!! TAATTTAGTTACTAAATCAT+TGG + chr3_1:55488822-55488841 Msa0363300:intron 15.0%
!!! ATATTTTTCTTATAGTGAAA+AGG - chr3_1:55488921-55488940 None:intergenic 15.0%
!!! TATTATGTTTATTTTGATGT+AGG + chr3_1:55489401-55489420 Msa0363300:intron 15.0%
!! GTAAATGTAATGAAAATATT+AGG - chr3_1:55490171-55490190 None:intergenic 15.0%
!! ACAAAATAGTAAATCTAATA+TGG - chr3_1:55490380-55490399 None:intergenic 15.0%
!!! TGCTATTTATATAATGAATA+CGG + chr3_1:55491815-55491834 Msa0363300:intron 15.0%
!!! CAAGGTTTATTTTTTTTATA+TGG + chr3_1:55492230-55492249 Msa0363300:CDS 15.0%
!!! TTATTTTTTTTATATGGGTA+CGG + chr3_1:55492236-55492255 Msa0363300:CDS 15.0%
!!! ATGCCATTATTTTGATTAAT+TGG - chr3_1:55485841-55485860 None:intergenic 20.0%
!! TCAAAATAATGGCATTTAAT+TGG + chr3_1:55485846-55485865 Msa0363300:intron 20.0%
!! ATTTAATTGGTATACATGAT+GGG + chr3_1:55485859-55485878 Msa0363300:intron 20.0%
!!! TAGTCTATAAGATTTTTATG+TGG - chr3_1:55486093-55486112 None:intergenic 20.0%
!! ATGTATAGAATCAAACAAAA+AGG - chr3_1:55486144-55486163 None:intergenic 20.0%
!!! AAATAACCTCAATTTTCATA+AGG + chr3_1:55486341-55486360 Msa0363300:CDS 20.0%
!!! TTTTTTTGCTCAATTTTGAT+TGG + chr3_1:55486387-55486406 Msa0363300:intron 20.0%
!! AAGAATTGCAAAAATACAAA+CGG - chr3_1:55486506-55486525 None:intergenic 20.0%
!!! ATTTCTGTAATTTTTTGTGA+TGG + chr3_1:55486536-55486555 Msa0363300:intron 20.0%
!! TTTATGTAAATTGTTTAGAG+GGG + chr3_1:55486864-55486883 Msa0363300:intron 20.0%
!! TTATATATTAGCATCATCTA+TGG - chr3_1:55487104-55487123 None:intergenic 20.0%
!!! GAATAATTTTGAATGAACAT+TGG - chr3_1:55487188-55487207 None:intergenic 20.0%
!!! TTTTAAAAACAGGACATTAA+AGG - chr3_1:55487838-55487857 None:intergenic 20.0%
!!! AGACAATATCTTTTAAAAAC+AGG - chr3_1:55487848-55487867 None:intergenic 20.0%
!! TCACAAAATTTAACAAAACA+GGG - chr3_1:55487871-55487890 None:intergenic 20.0%
!! TTCACAAAATTTAACAAAAC+AGG - chr3_1:55487872-55487891 None:intergenic 20.0%
!!! TTCTCATTTTTTTTTCCTTT+AGG + chr3_1:55487893-55487912 Msa0363300:intron 20.0%
!! GAAATATTCTGAATAATCAA+GGG - chr3_1:55488337-55488356 None:intergenic 20.0%
!!! TAGAAAGAGCAAATATTTTT+TGG + chr3_1:55488542-55488561 Msa0363300:CDS 20.0%
!!! TTTGAAAAAATGTTCTAGAT+TGG - chr3_1:55489028-55489047 None:intergenic 20.0%
!!! TTTTGACATCATTATCAAAA+AGG + chr3_1:55489107-55489126 Msa0363300:intron 20.0%
!! ATATTAAACTCGATCTATAT+TGG - chr3_1:55489150-55489169 None:intergenic 20.0%
!!! ATTCATTTGTTAAGTCATAT+AGG + chr3_1:55489494-55489513 Msa0363300:CDS 20.0%
!! ATCATTTAATTCAAGAGATA+CGG + chr3_1:55490295-55490314 Msa0363300:CDS 20.0%
!!! TATTTTGTGTATGTCATTAA+TGG + chr3_1:55490392-55490411 Msa0363300:intron 20.0%
!!! ATTTTGTGTATGTCATTAAT+GGG + chr3_1:55490393-55490412 Msa0363300:intron 20.0%
!! GCATGATATTAAAATAACAA+TGG - chr3_1:55490425-55490444 None:intergenic 20.0%
!! ATTATCTTGTCAATATTACT+TGG - chr3_1:55490536-55490555 None:intergenic 20.0%
!! ACCTTATTGAATTATGTAAA+GGG + chr3_1:55491349-55491368 Msa0363300:CDS 20.0%
!! TAATTTCATCATAAGAAGTT+GGG - chr3_1:55491375-55491394 None:intergenic 20.0%
!! TTAATTTCATCATAAGAAGT+TGG - chr3_1:55491376-55491395 None:intergenic 20.0%
!! ACAATACAATTCTTATATCA+TGG - chr3_1:55491743-55491762 None:intergenic 20.0%
!!! GTAAATATTTTTTTGTTCAG+TGG - chr3_1:55492177-55492196 None:intergenic 20.0%
!! TCATATTATGCAAAATAGAA+GGG - chr3_1:55492910-55492929 None:intergenic 20.0%
!! TTCATATTATGCAAAATAGA+AGG - chr3_1:55492911-55492930 None:intergenic 20.0%
! CATTTAATTGGTATACATGA+TGG + chr3_1:55485858-55485877 Msa0363300:intron 25.0%
! TTTAATTGGTATACATGATG+GGG + chr3_1:55485860-55485879 Msa0363300:intron 25.0%
!! TTCATTTTATGACAGTTGAA+AGG - chr3_1:55485893-55485912 None:intergenic 25.0%
!! AAAATTCTTCAGCTTTTACT+CGG + chr3_1:55486231-55486250 Msa0363300:intron 25.0%
!!! GAAGTAATCTATATTTTGGA+GGG - chr3_1:55487004-55487023 None:intergenic 25.0%
!!! AGAAGTAATCTATATTTTGG+AGG - chr3_1:55487005-55487024 None:intergenic 25.0%
! TCCAAAATATAGATTACTTC+TGG + chr3_1:55487004-55487023 Msa0363300:intron 25.0%
!! ACCAGAAGTAATCTATATTT+TGG - chr3_1:55487008-55487027 None:intergenic 25.0%
! TTATCATTGTTTATCGGAAA+TGG + chr3_1:55487422-55487441 Msa0363300:CDS 25.0%
! ACATTAAACAACATTGATCA+AGG - chr3_1:55487562-55487581 None:intergenic 25.0%
!! ATTATCGTAAGTGTATTGAT+TGG - chr3_1:55487749-55487768 None:intergenic 25.0%
! TGGAAATTTACCAACTATAT+CGG - chr3_1:55488219-55488238 None:intergenic 25.0%
! CGAAATATTCTGAATAATCA+AGG - chr3_1:55488338-55488357 None:intergenic 25.0%
! TATTCAGAATATTTCGATGT+TGG + chr3_1:55488342-55488361 Msa0363300:intron 25.0%
! ATTCAGAATATTTCGATGTT+GGG + chr3_1:55488343-55488362 Msa0363300:intron 25.0%
! ATTAATGTGGTATGAAGAAA+GGG + chr3_1:55488398-55488417 Msa0363300:CDS 25.0%
! AAGAAAGGGAAAATAAAAAC+AGG + chr3_1:55488412-55488431 Msa0363300:CDS 25.0%
!! TTTAAAGTACAACTCATGAA+GGG - chr3_1:55488517-55488536 None:intergenic 25.0%
! ATATACAATTGTGCAAACTT+AGG - chr3_1:55488723-55488742 None:intergenic 25.0%
!! TATGATACTGATAACGAAAT+CGG + chr3_1:55488744-55488763 Msa0363300:intron 25.0%
! GAAATAAGAAAATTACCTCA+CGG - chr3_1:55488777-55488796 None:intergenic 25.0%
! CAAAATAAAATTTATGCGCT+TGG - chr3_1:55489092-55489111 None:intergenic 25.0%
! TAGAGGAGATGAATATATTA+GGG - chr3_1:55489264-55489283 None:intergenic 25.0%
!!! ATGTTTATTTTGATGTAGGA+TGG + chr3_1:55489405-55489424 Msa0363300:intron 25.0%
!! ATTTGTTAAGTCATATAGGT+TGG + chr3_1:55489498-55489517 Msa0363300:CDS 25.0%
!!! AATAAGTGTAGCTTTATAGT+TGG - chr3_1:55489553-55489572 None:intergenic 25.0%
! AACTATAAAGCTACACTTAT+TGG + chr3_1:55489552-55489571 Msa0363300:CDS 25.0%
! ACTATAAAGCTACACTTATT+GGG + chr3_1:55489553-55489572 Msa0363300:CDS 25.0%
! TCAAAATTATCAAGATGCAA+TGG + chr3_1:55490122-55490141 Msa0363300:CDS 25.0%
! CTAATATGGTGATTCATTAA+AGG - chr3_1:55490366-55490385 None:intergenic 25.0%
! ACAATTGAATTTCAAAAACG+AGG + chr3_1:55490455-55490474 Msa0363300:CDS 25.0%
!! TTAATATTTTCATCACCACA+TGG - chr3_1:55490632-55490651 None:intergenic 25.0%
! AATGGTGTAACTATTCAAAA+AGG + chr3_1:55490758-55490777 Msa0363300:CDS 25.0%
! TAAATTTCAGCATCAATTGT+GGG - chr3_1:55490823-55490842 None:intergenic 25.0%
! TTAAATTTCAGCATCAATTG+TGG - chr3_1:55490824-55490843 None:intergenic 25.0%
!! TTTAATTTCATCGCAAGATT+CGG - chr3_1:55490957-55490976 None:intergenic 25.0%
! TCATCATCTTCAAACATAAT+AGG - chr3_1:55491100-55491119 None:intergenic 25.0%
!! TATTCGTGACACAAAATTTT+TGG + chr3_1:55491150-55491169 Msa0363300:CDS 25.0%
! AATTCCCATTGAAATTTACT+TGG + chr3_1:55491227-55491246 Msa0363300:CDS 25.0%
! CTTTCCAAGTAAATTTCAAT+GGG - chr3_1:55491234-55491253 None:intergenic 25.0%
! CACCTTATTGAATTATGTAA+AGG + chr3_1:55491348-55491367 Msa0363300:CDS 25.0%
! TAATCTTCTCATAAAATCAG+CGG - chr3_1:55491512-55491531 None:intergenic 25.0%
! CTTATATCATGGTATATTAG+TGG - chr3_1:55491732-55491751 None:intergenic 25.0%
! CAATGGAAATGATAATTGTT+TGG - chr3_1:55491866-55491885 None:intergenic 25.0%
! AAATATTTACGACGCTATAA+TGG + chr3_1:55492187-55492206 Msa0363300:CDS 25.0%
! AATATTTACGACGCTATAAT+GGG + chr3_1:55492188-55492207 Msa0363300:CDS 25.0%
!! GTACAGGAAAAACTTTTATT+TGG + chr3_1:55492261-55492280 Msa0363300:CDS 25.0%
! AGTTAAAAGAATTTGCAGAA+TGG + chr3_1:55492759-55492778 Msa0363300:CDS 25.0%
! GTTAAAAGAATTTGCAGAAT+GGG + chr3_1:55492760-55492779 Msa0363300:CDS 25.0%
!!! GCTCTATTTTTAAAATACTC+TGG - chr3_1:55492938-55492957 None:intergenic 25.0%
! CAAATATGTTCTTTCTTCAT+CGG - chr3_1:55493023-55493042 None:intergenic 25.0%
ATAAAATGAACCTCTTGAGT+TGG + chr3_1:55485903-55485922 Msa0363300:intron 30.0%
CAATGGTTAAAACAACTCTT+GGG - chr3_1:55486012-55486031 None:intergenic 30.0%
TCAATGGTTAAAACAACTCT+TGG - chr3_1:55486013-55486032 None:intergenic 30.0%
TTCAGCATATATAGAGTCAA+TGG - chr3_1:55486029-55486048 None:intergenic 30.0%
! GAGTAAAAGCTGAAGAATTT+TGG - chr3_1:55486232-55486251 None:intergenic 30.0%
! AAAGCACCTTATGAAAATTG+AGG - chr3_1:55486350-55486369 None:intergenic 30.0%
!!! TCTGTAATTTTTTGTGATGG+CGG + chr3_1:55486539-55486558 Msa0363300:intron 30.0%
GAAAGCTCAAAAGCAATATT+TGG - chr3_1:55486654-55486673 None:intergenic 30.0%
CATTATCCTTTCAGATATTC+AGG + chr3_1:55487329-55487348 Msa0363300:intron 30.0%
TTGTTTCCTGAATATCTGAA+AGG - chr3_1:55487338-55487357 None:intergenic 30.0%
AGATATTCAGGAAACAAGAA+AGG + chr3_1:55487341-55487360 Msa0363300:intron 30.0%
AAACAAGAAAGGTGACTTAT+AGG + chr3_1:55487352-55487371 Msa0363300:intron 30.0%
AACAAGAAAGGTGACTTATA+GGG + chr3_1:55487353-55487372 Msa0363300:intron 30.0%
GAATCAAAATTACATACCGT+TGG - chr3_1:55487469-55487488 None:intergenic 30.0%
ACTTTACCGTTAGATAAAGT+AGG + chr3_1:55487616-55487635 Msa0363300:CDS 30.0%
! AAAATATAGTCTAAGGCATG+TGG + chr3_1:55487660-55487679 Msa0363300:CDS 30.0%
! AAATATAGTCTAAGGCATGT+GGG + chr3_1:55487661-55487680 Msa0363300:CDS 30.0%
CAATACACTTACGATAATGA+AGG + chr3_1:55487751-55487770 Msa0363300:CDS 30.0%
ATATCAATGTCATCTCCTAA+AGG - chr3_1:55487911-55487930 None:intergenic 30.0%
ACATCTTGCCATCTAAAAAA+AGG + chr3_1:55488159-55488178 Msa0363300:CDS 30.0%
ACGCAAGAGAACAAAATTAT+TGG + chr3_1:55488187-55488206 Msa0363300:CDS 30.0%
TTCAGAATATTTCGATGTTG+GGG + chr3_1:55488344-55488363 Msa0363300:intron 30.0%
CATTAATGTGGTATGAAGAA+AGG + chr3_1:55488397-55488416 Msa0363300:CDS 30.0%
!! CTTTAAAGTACAACTCATGA+AGG - chr3_1:55488518-55488537 None:intergenic 30.0%
ATCGATAAGACCAAAAACAA+TGG + chr3_1:55488618-55488637 Msa0363300:CDS 30.0%
TCTCCATTCATTGTAAAAAC+TGG - chr3_1:55488654-55488673 None:intergenic 30.0%
!! ATTGGAACACTACTTTTGAA+GGG - chr3_1:55489010-55489029 None:intergenic 30.0%
TAGGGCATAATTAACATAGA+AGG - chr3_1:55489246-55489265 None:intergenic 30.0%
GTAGAGGAGATGAATATATT+AGG - chr3_1:55489265-55489284 None:intergenic 30.0%
TATCCATTAATATTCTCTCG+CGG + chr3_1:55489748-55489767 Msa0363300:CDS 30.0%
! GACACAAAAACTCTTTTGAT+GGG - chr3_1:55489826-55489845 None:intergenic 30.0%
! TGACACAAAAACTCTTTTGA+TGG - chr3_1:55489827-55489846 None:intergenic 30.0%
! TTTTTGTGTCAATGAAAGAG+TGG + chr3_1:55489836-55489855 Msa0363300:CDS 30.0%
!! TATCAGCTCTAACATCTTTT+TGG - chr3_1:55489993-55490012 None:intergenic 30.0%
TTAATTCAAGAGATACGGAA+TGG + chr3_1:55490300-55490319 Msa0363300:CDS 30.0%
ATACGGAATGGAAAGATATT+CGG + chr3_1:55490312-55490331 Msa0363300:CDS 30.0%
TGGATGAACAATTCGAAAAT+CGG - chr3_1:55490516-55490535 None:intergenic 30.0%
ATGCCCATATTAATGTTGAA+TGG + chr3_1:55490843-55490862 Msa0363300:CDS 30.0%
GCACCATTCAACATTAATAT+GGG - chr3_1:55490849-55490868 None:intergenic 30.0%
TGCACCATTCAACATTAATA+TGG - chr3_1:55490850-55490869 None:intergenic 30.0%
TTTGTTCAAGTACGTTAACA+AGG + chr3_1:55490892-55490911 Msa0363300:CDS 30.0%
TTGTTCAAGTACGTTAACAA+GGG + chr3_1:55490893-55490912 Msa0363300:CDS 30.0%
ATGAAAACTCAATCGTTCTT+CGG - chr3_1:55491062-55491081 None:intergenic 30.0%
! AGAACGATTGAGTTTTCATT+TGG + chr3_1:55491063-55491082 Msa0363300:CDS 30.0%
! AATTTTGTGTCACGAATATG+TGG - chr3_1:55491148-55491167 None:intergenic 30.0%
GCTTTCCAAGTAAATTTCAA+TGG - chr3_1:55491235-55491254 None:intergenic 30.0%
GCCCTTTACATAATTCAATA+AGG - chr3_1:55491353-55491372 None:intergenic 30.0%
CATCAAATACAACTCCTTTA+AGG + chr3_1:55491408-55491427 Msa0363300:CDS 30.0%
GATAAGGAAAAACATATACC+TGG - chr3_1:55491649-55491668 None:intergenic 30.0%
! TAAGCAAGAAGCATAAGATA+AGG - chr3_1:55491665-55491684 None:intergenic 30.0%
TTGTTTATAGCACAATTCCA+CGG + chr3_1:55491759-55491778 Msa0363300:intron 30.0%
GCATGGAAAAATAAAGAGTT+TGG - chr3_1:55491933-55491952 None:intergenic 30.0%
! TAGCTTTTCAATTTCTGCAA+GGG - chr3_1:55491994-55492013 None:intergenic 30.0%
CAACAAAGATTCATTGAAAG+AGG + chr3_1:55492124-55492143 Msa0363300:CDS 30.0%
!!! TTTTTTTTATATGGGTACGG+TGG + chr3_1:55492239-55492258 Msa0363300:CDS 30.0%
AAACATTCGTCAACAATGAA+TGG - chr3_1:55492404-55492423 None:intergenic 30.0%
TGCGCGCAAAAATAATAATA+TGG + chr3_1:55492468-55492487 Msa0363300:CDS 30.0%
GCGCGCAAAAATAATAATAT+GGG + chr3_1:55492469-55492488 Msa0363300:CDS 30.0%
!!! TCTTCGACAATCAGATTTTT+TGG - chr3_1:55492971-55492990 None:intergenic 30.0%
TATCTTGCCATGCAAAAAGA+AGG + chr3_1:55485706-55485725 Msa0363300:CDS 35.0%
! TGATGTTCCTTCTTTTTGCA+TGG - chr3_1:55485716-55485735 None:intergenic 35.0%
CAAAAAGAAGGAACATCAGA+AGG + chr3_1:55485718-55485737 Msa0363300:CDS 35.0%
!! TTTTTCGTAGTTTTTTGGCC+TGG - chr3_1:55485752-55485771 None:intergenic 35.0%
!!! GGGACTTTTTCGTAGTTTTT+TGG - chr3_1:55485757-55485776 None:intergenic 35.0%
!!! CTGTTTTTGTGTGTAGAAAG+GGG - chr3_1:55485777-55485796 None:intergenic 35.0%
!!! GCTGTTTTTGTGTGTAGAAA+GGG - chr3_1:55485778-55485797 None:intergenic 35.0%
!!! TGCTGTTTTTGTGTGTAGAA+AGG - chr3_1:55485779-55485798 None:intergenic 35.0%
! TTTTAATGCTCCAACTCAAG+AGG - chr3_1:55485916-55485935 None:intergenic 35.0%
! AGTTGCTGTTCATAGAGTTA+AGG + chr3_1:55486299-55486318 Msa0363300:CDS 35.0%
!!! TAATTTTTTGTGATGGCGGT+GGG + chr3_1:55486543-55486562 Msa0363300:intron 35.0%
TTAGAGGGGAACAATTTAGA+TGG + chr3_1:55486878-55486897 Msa0363300:intron 35.0%
TTGGTGTGATAAGAGGAATT+AGG - chr3_1:55487169-55487188 None:intergenic 35.0%
ATGAACATTGGTGTGATAAG+AGG - chr3_1:55487176-55487195 None:intergenic 35.0%
ACAAGAAAGGTGACTTATAG+GGG + chr3_1:55487354-55487373 Msa0363300:intron 35.0%
!!! CGTAGTTTTAAATGACACGA+AGG + chr3_1:55487488-55487507 Msa0363300:intron 35.0%
TTGAGGCCTACTTTATCTAA+CGG - chr3_1:55487625-55487644 None:intergenic 35.0%
! CTATATTTTCCAGGACCAAT+TGG - chr3_1:55487649-55487668 None:intergenic 35.0%
GTCCTGGAAAATATAGTCTA+AGG + chr3_1:55487653-55487672 Msa0363300:CDS 35.0%
! TGCCTTAGACTATATTTTCC+AGG - chr3_1:55487658-55487677 None:intergenic 35.0%
! TATTGATTGGAAACTGTCGA+CGG - chr3_1:55487736-55487755 None:intergenic 35.0%
AAGCGATAGTGAAACACTAT+CGG + chr3_1:55487931-55487950 Msa0363300:CDS 35.0%
TGAAACACTATCGGATGAAT+CGG + chr3_1:55487940-55487959 Msa0363300:CDS 35.0%
GATGTTCCTGACAATGATTA+TGG + chr3_1:55488025-55488044 Msa0363300:CDS 35.0%
TTCCTGACAATGATTATGGT+AGG + chr3_1:55488029-55488048 Msa0363300:intron 35.0%
AACCTACCATAATCATTGTC+AGG - chr3_1:55488034-55488053 None:intergenic 35.0%
!!! CGTCTTGTCCTTTTTTTAGA+TGG - chr3_1:55488170-55488189 None:intergenic 35.0%
TTGGTTGAATCCGATATAGT+TGG + chr3_1:55488206-55488225 Msa0363300:CDS 35.0%
! AGAGAATCGGCAAGTATTTT+TGG - chr3_1:55488239-55488258 None:intergenic 35.0%
CAATCCTTACAAACATATCG+CGG - chr3_1:55488372-55488391 None:intergenic 35.0%
ATGCAGCACATAGAAAATTC+TGG - chr3_1:55488450-55488469 None:intergenic 35.0%
CCATTCATTGTAAAAACTGG+CGG - chr3_1:55488651-55488670 None:intergenic 35.0%
GGAGAAAATTACCACCAAAT+CGG + chr3_1:55488669-55488688 Msa0363300:CDS 35.0%
! ATACTGATAACGAAATCGGA+TGG + chr3_1:55488748-55488767 Msa0363300:intron 35.0%
!! GATTGGAACACTACTTTTGA+AGG - chr3_1:55489011-55489030 None:intergenic 35.0%
TTCAAGAACAGCAAAAGAGA+AGG - chr3_1:55489287-55489306 None:intergenic 35.0%
! CAAGTATTGTTGACGAGTTA+AGG + chr3_1:55489452-55489471 Msa0363300:CDS 35.0%
AGCTACACTTATTGGGTAAA+AGG + chr3_1:55489560-55489579 Msa0363300:CDS 35.0%
GCTACACTTATTGGGTAAAA+GGG + chr3_1:55489561-55489580 Msa0363300:CDS 35.0%
CTACACTTATTGGGTAAAAG+GGG + chr3_1:55489562-55489581 Msa0363300:CDS 35.0%
CAGGTATGATGTCTCAAAAA+CGG - chr3_1:55489719-55489738 None:intergenic 35.0%
! TTAATGGATATTGTAGTGCC+AGG - chr3_1:55489738-55489757 None:intergenic 35.0%
TTGCGTACAAATTGCAACAA+AGG + chr3_1:55489860-55489879 Msa0363300:CDS 35.0%
TGCGTACAAATTGCAACAAA+GGG + chr3_1:55489861-55489880 Msa0363300:CDS 35.0%
AAATTGCTGCAACAACTTTC+TGG - chr3_1:55489914-55489933 None:intergenic 35.0%
TGTTAGAGCTGATATGTACA+AGG + chr3_1:55489999-55490018 Msa0363300:CDS 35.0%
GTTAGAGCTGATATGTACAA+GGG + chr3_1:55490000-55490019 Msa0363300:CDS 35.0%
GTACAAGGGATTATATGAAG+CGG + chr3_1:55490014-55490033 Msa0363300:CDS 35.0%
ATGCAATGGCAATATGTTCT+TGG + chr3_1:55490136-55490155 Msa0363300:CDS 35.0%
ATGGCAATATGTTCTTGGAT+TGG + chr3_1:55490141-55490160 Msa0363300:CDS 35.0%
CATTTACATGCAACCACAAA+TGG + chr3_1:55490184-55490203 Msa0363300:CDS 35.0%
TTTAAGTATGCAACCATCTC+CGG - chr3_1:55490210-55490229 None:intergenic 35.0%
! ACAATTTGAAACCAGCAGAT+AGG + chr3_1:55490235-55490254 Msa0363300:CDS 35.0%
AAAATTCTGCTCACCAAGTT+TGG - chr3_1:55490261-55490280 None:intergenic 35.0%
! ACTTCCTCATGCTCATATTT+TGG + chr3_1:55490478-55490497 Msa0363300:CDS 35.0%
AACACCAAAATATGAGCATG+AGG - chr3_1:55490485-55490504 None:intergenic 35.0%
GGATGAACAATTCGAAAATC+GGG - chr3_1:55490515-55490534 None:intergenic 35.0%
TGAGACAATATTGTAGAGCT+CGG - chr3_1:55490591-55490610 None:intergenic 35.0%
ACATGGTCCATGTATCATAA+GGG - chr3_1:55490615-55490634 None:intergenic 35.0%
AATTCACCGTGTACGATAAA+TGG + chr3_1:55490650-55490669 Msa0363300:CDS 35.0%
ATTCACCGTGTACGATAAAT+GGG + chr3_1:55490651-55490670 Msa0363300:CDS 35.0%
TGGGACAACGTATCTATTAT+CGG - chr3_1:55490795-55490814 None:intergenic 35.0%
! CGATTGAGTTTTCATTTGGA+AGG + chr3_1:55491067-55491086 Msa0363300:CDS 35.0%
!!! GTGACACAAAATTTTTGGCT+TGG + chr3_1:55491155-55491174 Msa0363300:CDS 35.0%
!!! CACAAAATTTTTGGCTTGGA+TGG + chr3_1:55491159-55491178 Msa0363300:CDS 35.0%
!!! AAAATTTTTGGCTTGGATGG+AGG + chr3_1:55491162-55491181 Msa0363300:CDS 35.0%
ATAAGTGAGATCCTTTGCAT+CGG - chr3_1:55491203-55491222 None:intergenic 35.0%
ATGCAAAGGATCTCACTTAT+GGG + chr3_1:55491203-55491222 Msa0363300:CDS 35.0%
TTGCTTCGTATTAGGTTTGT+TGG + chr3_1:55491435-55491454 Msa0363300:CDS 35.0%
GTTTATTGATGCCATTAACC+AGG + chr3_1:55491471-55491490 Msa0363300:CDS 35.0%
! CATTAACCAGGCATCATTTT+GGG + chr3_1:55491483-55491502 Msa0363300:CDS 35.0%
! ATTAACCAGGCATCATTTTG+GGG + chr3_1:55491484-55491503 Msa0363300:CDS 35.0%
TGCTTACAAATCAATTTGCG+CGG + chr3_1:55491545-55491564 Msa0363300:CDS 35.0%
! AAGTAGTGTGGTCTAAAACA+TGG + chr3_1:55491572-55491591 Msa0363300:CDS 35.0%
! AGTAGTGTGGTCTAAAACAT+GGG + chr3_1:55491573-55491592 Msa0363300:CDS 35.0%
TCTTGCTTAGAATGAAACGA+TGG + chr3_1:55491676-55491695 Msa0363300:intron 35.0%
AATGAAACGATGGCATGATA+AGG + chr3_1:55491686-55491705 Msa0363300:intron 35.0%
TATCATTTCCATTGTATGCG+AGG + chr3_1:55491872-55491891 Msa0363300:intron 35.0%
! GTAGCTTTTCAATTTCTGCA+AGG - chr3_1:55491995-55492014 None:intergenic 35.0%
!!! GTCCTTGAAATTTTTTCCGT+GGG - chr3_1:55492024-55492043 None:intergenic 35.0%
TTTATAGCGACATCAGTTCT+TGG - chr3_1:55492062-55492081 None:intergenic 35.0%
ATGTCGCTATAAATAGTGCT+GGG + chr3_1:55492069-55492088 Msa0363300:CDS 35.0%
AGAGTTGAGGCAAATAAACA+AGG + chr3_1:55492212-55492231 Msa0363300:CDS 35.0%
TGTTAGGACAATTTGTCCTT+TGG - chr3_1:55492312-55492331 None:intergenic 35.0%
AATGAATGGTATATGGAACC+TGG - chr3_1:55492390-55492409 None:intergenic 35.0%
CGTCAACAATGAATGGTATA+TGG - chr3_1:55492397-55492416 None:intergenic 35.0%
ATTGAACCATTAAGCCCATT+GGG + chr3_1:55492434-55492453 Msa0363300:CDS 35.0%
AAACAATGCTTGTGCATCAT+TGG - chr3_1:55492503-55492522 None:intergenic 35.0%
TGCGTTTATTATGTCTTGTC+TGG - chr3_1:55492642-55492661 None:intergenic 35.0%
! ACCAATATGAGACTTTTGCA+CGG + chr3_1:55492713-55492732 Msa0363300:CDS 35.0%
AGAATTTGCAGAATGGGTAT+TGG + chr3_1:55492766-55492785 Msa0363300:CDS 35.0%
GAATTTGCAGAATGGGTATT+GGG + chr3_1:55492767-55492786 Msa0363300:CDS 35.0%
TAACATGATCACCTGAACTA+TGG - chr3_1:55492865-55492884 None:intergenic 35.0%
TGTTAGCAACAATACTACTG+GGG - chr3_1:55493063-55493082 None:intergenic 35.0%
CTGTTAGCAACAATACTACT+GGG - chr3_1:55493064-55493083 None:intergenic 35.0%
!!! ACGTTGAATGAGAGGCATTT+TGG - chr3_1:55486186-55486205 None:intergenic 40.0%
TAATGAGCACGTTGAATGAG+AGG - chr3_1:55486194-55486213 None:intergenic 40.0%
! ATTCTTCAGCTTTTACTCGG+CGG + chr3_1:55486234-55486253 Msa0363300:intron 40.0%
TTTACTCGGCGGTTTCAAAA+CGG + chr3_1:55486245-55486264 Msa0363300:CDS 40.0%
!!! GTAATTTTTTGTGATGGCGG+TGG + chr3_1:55486542-55486561 Msa0363300:intron 40.0%
TGCGATTCACATACACATCA+AGG - chr3_1:55487311-55487330 None:intergenic 40.0%
CAAGAAAGGTGACTTATAGG+GGG + chr3_1:55487355-55487374 Msa0363300:intron 40.0%
ACGGTTGCTCATGTCATAAT+AGG + chr3_1:55487384-55487403 Msa0363300:intron 40.0%
CCATTGTCTTTATGCGTTGA+TGG - chr3_1:55487595-55487614 None:intergenic 40.0%
CCATCAACGCATAAAGACAA+TGG + chr3_1:55487592-55487611 Msa0363300:CDS 40.0%
AAAGTAGGCCTCAAACCAAT+TGG + chr3_1:55487631-55487650 Msa0363300:CDS 40.0%
CATGTGGGAAATCAAAGTAG+TGG + chr3_1:55487676-55487695 Msa0363300:CDS 40.0%
CAATTAAACCAATCATGCGG+GGG - chr3_1:55487983-55488002 None:intergenic 40.0%
GCAATTAAACCAATCATGCG+GGG - chr3_1:55487984-55488003 None:intergenic 40.0%
CGCAATTAAACCAATCATGC+GGG - chr3_1:55487985-55488004 None:intergenic 40.0%
GCGCAATTAAACCAATCATG+CGG - chr3_1:55487986-55488005 None:intergenic 40.0%
AGGATTGCAACGCATTAATG+TGG + chr3_1:55488385-55488404 Msa0363300:CDS 40.0%
! TTTTCTATGTGCTGCATGCA+AGG + chr3_1:55488453-55488472 Msa0363300:CDS 40.0%
TACAACTCATGAAGGGATTG+AGG - chr3_1:55488510-55488529 None:intergenic 40.0%
ATGTTCGCCTTCACTTCAAT+TGG + chr3_1:55488588-55488607 Msa0363300:CDS 40.0%
CTTTGCACCAATTGAAGTGA+AGG - chr3_1:55488598-55488617 None:intergenic 40.0%
! CCGCCAGTTTTTACAATGAA+TGG + chr3_1:55488648-55488667 Msa0363300:CDS 40.0%
GCAAGACATGCACTCATATT+TGG - chr3_1:55488801-55488820 None:intergenic 40.0%
AACAGCAAAAGAGAAGGTAG+AGG - chr3_1:55489281-55489300 None:intergenic 40.0%
!! CTCTTTGCGATAGTGGAAAT+GGG + chr3_1:55489333-55489352 Msa0363300:intron 40.0%
ATCGTAATCACCTACAACCA+AGG - chr3_1:55489635-55489654 None:intergenic 40.0%
ATCATTGTTGAGTGTGTGTC+AGG + chr3_1:55489676-55489695 Msa0363300:CDS 40.0%
!!! CGTTTTTGAGACATCATACC+TGG + chr3_1:55489717-55489736 Msa0363300:CDS 40.0%
TCACCGCGAGAGAATATTAA+TGG - chr3_1:55489754-55489773 None:intergenic 40.0%
! TTGCAGCAATTTTGTTGCGA+TGG + chr3_1:55489922-55489941 Msa0363300:CDS 40.0%
GATTTAGCATGATCGAGTCT+TGG + chr3_1:55489944-55489963 Msa0363300:CDS 40.0%
TCGAGTCTTGGCGATTAAAA+TGG + chr3_1:55489956-55489975 Msa0363300:CDS 40.0%
GAGAACAATCCAAGTTCAGT+GGG + chr3_1:55490048-55490067 Msa0363300:CDS 40.0%
ATCCAAGTTCAGTGGGAAAA+AGG + chr3_1:55490055-55490074 Msa0363300:CDS 40.0%
TCCAAGTTCAGTGGGAAAAA+GGG + chr3_1:55490056-55490075 Msa0363300:CDS 40.0%
ATATTCGGCAAAGTCAAAGC+AGG + chr3_1:55490327-55490346 Msa0363300:CDS 40.0%
GAACAATTCGAAAATCGGGA+TGG - chr3_1:55490511-55490530 None:intergenic 40.0%
TGTGCTGAAATTCCTGACAA+AGG + chr3_1:55490557-55490576 Msa0363300:CDS 40.0%
!!! TCGGGATTTTTTCCTTTGTC+AGG - chr3_1:55490572-55490591 None:intergenic 40.0%
GAGACAATATTGTAGAGCTC+GGG - chr3_1:55490590-55490609 None:intergenic 40.0%
GTCTCATCCCTTATGATACA+TGG + chr3_1:55490605-55490624 Msa0363300:CDS 40.0%
CACATGGTCCATGTATCATA+AGG - chr3_1:55490616-55490635 None:intergenic 40.0%
CTTATGATACATGGACCATG+TGG + chr3_1:55490614-55490633 Msa0363300:CDS 40.0%
CACTTCCCATTTATCGTACA+CGG - chr3_1:55490659-55490678 None:intergenic 40.0%
GTAACCGTCAGCATCAATAA+CGG - chr3_1:55490717-55490736 None:intergenic 40.0%
TTACCCGGTTTACAGAAGAA+GGG + chr3_1:55490733-55490752 Msa0363300:CDS 40.0%
TTGTCCCTTCTTCTGTAAAC+CGG - chr3_1:55490740-55490759 None:intergenic 40.0%
GTTTACAGAAGAAGGGACAA+TGG + chr3_1:55490740-55490759 Msa0363300:CDS 40.0%
! GCATCAATTGTGGGTTGTAT+GGG - chr3_1:55490814-55490833 None:intergenic 40.0%
! AGCATCAATTGTGGGTTGTA+TGG - chr3_1:55490815-55490834 None:intergenic 40.0%
AAACTCAATCGTTCTTCGGA+AGG - chr3_1:55491058-55491077 None:intergenic 40.0%
! TGAAGATGATGACGACTTAG+AGG + chr3_1:55491108-55491127 Msa0363300:CDS 40.0%
CAAGATATATGCCGATGCAA+AGG + chr3_1:55491189-55491208 Msa0363300:CDS 40.0%
GATGCAAAGGATCTCACTTA+TGG + chr3_1:55491202-55491221 Msa0363300:CDS 40.0%
TGCAAAGGATCTCACTTATG+GGG + chr3_1:55491204-55491223 Msa0363300:CDS 40.0%
ACTGATACACCTCTTTGTCT+TGG - chr3_1:55491277-55491296 None:intergenic 40.0%
! AGACAAAGAGGTGTATCAGT+TGG + chr3_1:55491277-55491296 Msa0363300:CDS 40.0%
! AAAGAGGTGTATCAGTTGGA+AGG + chr3_1:55491281-55491300 Msa0363300:CDS 40.0%
TACGAAGCAAGTCTCCTTAA+AGG - chr3_1:55491425-55491444 None:intergenic 40.0%
! AAGGAGACTTGCTTCGTATT+AGG + chr3_1:55491427-55491446 Msa0363300:CDS 40.0%
CCAAAATGATGCCTGGTTAA+TGG - chr3_1:55491485-55491504 None:intergenic 40.0%
! CCATTAACCAGGCATCATTT+TGG + chr3_1:55491482-55491501 Msa0363300:CDS 40.0%
!! GTTTTAGACCACACTACTTC+TGG - chr3_1:55491571-55491590 None:intergenic 40.0%
TATAGCACAATTCCACGGTA+TGG + chr3_1:55491764-55491783 Msa0363300:intron 40.0%
CATCATATATGTCCATACCG+TGG - chr3_1:55491779-55491798 None:intergenic 40.0%
AAAGATGACCTCGCATACAA+TGG - chr3_1:55491883-55491902 None:intergenic 40.0%
GTCCCACGGAAAAAATTTCA+AGG + chr3_1:55492019-55492038 Msa0363300:CDS 40.0%
!!! GGTCCTTGAAATTTTTTCCG+TGG - chr3_1:55492025-55492044 None:intergenic 40.0%
ACATCAGTTCTTGGCATAGA+CGG - chr3_1:55492053-55492072 None:intergenic 40.0%
GATGTCGCTATAAATAGTGC+TGG + chr3_1:55492068-55492087 Msa0363300:CDS 40.0%
! CATTGAAAGAGGAGCATGAT+CGG + chr3_1:55492135-55492154 Msa0363300:CDS 40.0%
TCATCTGCATTGAGATCCAA+AGG + chr3_1:55492293-55492312 Msa0363300:CDS 40.0%
AGGACAAATTGTCCTAACAG+TGG + chr3_1:55492313-55492332 Msa0363300:CDS 40.0%
! CAATGGGCTTAATGGTTCAA+TGG - chr3_1:55492435-55492454 None:intergenic 40.0%
CATTGAACCATTAAGCCCAT+TGG + chr3_1:55492433-55492452 Msa0363300:CDS 40.0%
TTGAACCATTAAGCCCATTG+GGG + chr3_1:55492435-55492454 Msa0363300:CDS 40.0%
GCAATATCAATTGCCCCAAT+GGG - chr3_1:55492451-55492470 None:intergenic 40.0%
!! GATGCACAAGCATTGTTTTG+AGG + chr3_1:55492505-55492524 Msa0363300:CDS 40.0%
TGCAAAGCAGACATTCCATT+CGG + chr3_1:55492554-55492573 Msa0363300:CDS 40.0%
! TCGTTCTAGGTGATGACTTT+CGG + chr3_1:55492588-55492607 Msa0363300:CDS 40.0%
ATTCTACCAGTGGTTCCTAA+AGG + chr3_1:55492614-55492633 Msa0363300:CDS 40.0%
! ATGTCTTGTCTGGTTCCTTT+AGG - chr3_1:55492632-55492651 None:intergenic 40.0%
ACCGTGCAAAAGTCTCATAT+TGG - chr3_1:55492717-55492736 None:intergenic 40.0%
CCTGTTAGCAACAATACTAC+TGG - chr3_1:55493065-55493084 None:intergenic 40.0%
CCAGTAGTATTGTTGCTAAC+AGG + chr3_1:55493062-55493081 Msa0363300:CDS 40.0%
TATGGTGTGTGAACATCATC+AGG - chr3_1:55493088-55493107 None:intergenic 40.0%
AAGGAACTCGCTGCTGAATT+TGG + chr3_1:55486318-55486337 Msa0363300:CDS 45.0%
GACTTATAGGGGGTGAAACA+CGG + chr3_1:55487365-55487384 Msa0363300:intron 45.0%
CGGAAATGGAATCCGCTAAA+AGG + chr3_1:55487436-55487455 Msa0363300:CDS 45.0%
!!! GTTGGTTTTGCGCCTTTTAG+CGG - chr3_1:55487451-55487470 None:intergenic 45.0%
! GCTAAAAGGCGCAAAACCAA+CGG + chr3_1:55487450-55487469 Msa0363300:CDS 45.0%
!! TTCCAGGACCAATTGGTTTG+AGG - chr3_1:55487642-55487661 None:intergenic 45.0%
ACTATCGGATGAATCGGATG+TGG + chr3_1:55487946-55487965 Msa0363300:CDS 45.0%
GATCATTTGTGTGCCACAGA+AGG + chr3_1:55488119-55488138 Msa0363300:intron 45.0%
GGAACCGCGATATGTTTGTA+AGG + chr3_1:55488365-55488384 Msa0363300:CDS 45.0%
ACTCATGAAGGGATTGAGGT+AGG - chr3_1:55488506-55488525 None:intergenic 45.0%
! TAGGCAGCAAACTACCGATT+TGG - chr3_1:55488686-55488705 None:intergenic 45.0%
!! GTAGTTTGCTGCCTAAACCA+GGG + chr3_1:55488691-55488710 Msa0363300:CDS 45.0%
!! TAGTTTGCTGCCTAAACCAG+GGG + chr3_1:55488692-55488711 Msa0363300:CDS 45.0%
!! TTAGGTTGATCCCCTGGTTT+AGG - chr3_1:55488705-55488724 None:intergenic 45.0%
CTCTTGTCTCTTCTTACGCT+AGG - chr3_1:55489064-55489083 None:intergenic 45.0%
TTAGCTGCTCTTTGCGATAG+TGG + chr3_1:55489326-55489345 Msa0363300:intron 45.0%
!! GCTCTTTGCGATAGTGGAAA+TGG + chr3_1:55489332-55489351 Msa0363300:intron 45.0%
!! TTTGCGATAGTGGAAATGGG+TGG + chr3_1:55489336-55489355 Msa0363300:intron 45.0%
TTGGGTAAAAGGGGATACGA+TGG + chr3_1:55489571-55489590 Msa0363300:CDS 45.0%
GTAAAAGGGGATACGATGGT+CGG + chr3_1:55489575-55489594 Msa0363300:CDS 45.0%
TAATGCACCAACTGCATCAG+AGG + chr3_1:55489603-55489622 Msa0363300:CDS 45.0%
TGTAGGTGATTACGATGCAG+CGG + chr3_1:55489639-55489658 Msa0363300:CDS 45.0%
ATATTCTCTCGCGGTGAAGA+CGG + chr3_1:55489757-55489776 Msa0363300:CDS 45.0%
CAACAAAGGGTCGATGATCA+AGG + chr3_1:55489874-55489893 Msa0363300:CDS 45.0%
CGAGAACAATCCAAGTTCAG+TGG + chr3_1:55490047-55490066 Msa0363300:CDS 45.0%
! ACCCTTTTTCCCACTGAACT+TGG - chr3_1:55490060-55490079 None:intergenic 45.0%
GTGTTACCCGCAAGATTTGT+CGG + chr3_1:55490081-55490100 Msa0363300:CDS 45.0%
TACATGCAACCACAAATGGC+CGG + chr3_1:55490188-55490207 Msa0363300:CDS 45.0%
CAATTCGAAAATCGGGATGG+AGG - chr3_1:55490508-55490527 None:intergenic 45.0%
AGCACCGTTATTGATGCTGA+CGG + chr3_1:55490710-55490729 Msa0363300:CDS 45.0%
TATTGATGCTGACGGTTACC+CGG + chr3_1:55490718-55490737 Msa0363300:CDS 45.0%
GTTACCCGGTTTACAGAAGA+AGG + chr3_1:55490732-55490751 Msa0363300:CDS 45.0%
TGTCCCTTCTTCTGTAAACC+GGG - chr3_1:55490739-55490758 None:intergenic 45.0%
! TCTTGGTGACCATCTGTGTT+GGG - chr3_1:55491260-55491279 None:intergenic 45.0%
AGATGGTCACCAAGACAAAG+AGG + chr3_1:55491265-55491284 Msa0363300:CDS 45.0%
TAAAATTTCTCCCCAGACCC+TGG - chr3_1:55491322-55491341 None:intergenic 45.0%
GAACACACAAGATGCGTCTT+TGG - chr3_1:55491627-55491646 None:intergenic 45.0%
GAAAAGCTACAACAGTCCCA+CGG + chr3_1:55492005-55492024 Msa0363300:CDS 45.0%
TTCTTGGCATAGACGGATAG+TGG - chr3_1:55492046-55492065 None:intergenic 45.0%
TTATATGGGTACGGTGGTAC+AGG + chr3_1:55492245-55492264 Msa0363300:CDS 45.0%
ATAGCAGCGCTTCTTATTCC+AGG + chr3_1:55492347-55492366 Msa0363300:CDS 45.0%
! AATTGCCCCAATGGGCTTAA+TGG - chr3_1:55492443-55492462 None:intergenic 45.0%
CGCAATATCAATTGCCCCAA+TGG - chr3_1:55492452-55492471 None:intergenic 45.0%
AGGCTGTTGATCGTAGTTTC+CGG + chr3_1:55492525-55492544 Msa0363300:CDS 45.0%
TGTCTGCTTTGCATACATCC+CGG - chr3_1:55492547-55492566 None:intergenic 45.0%
AAAGCAGACATTCCATTCGG+AGG + chr3_1:55492557-55492576 Msa0363300:CDS 45.0%
CTTTCGGCAAATTCTACCAG+TGG + chr3_1:55492604-55492623 Msa0363300:CDS 45.0%
ACTATGGATAAGCAGGTCGT+CGG - chr3_1:55492849-55492868 None:intergenic 45.0%
GACCTGCTTATCCATAGTTC+AGG + chr3_1:55492851-55492870 Msa0363300:CDS 45.0%
CACCTGAACTATGGATAAGC+AGG - chr3_1:55492856-55492875 None:intergenic 45.0%
!!! TTTTTTAATTTTTTTTTTGA+AGG + chr3_1:55486418-55486437 Msa0363300:intron 5.0%
AGATTGAACCCCCGCATGAT+TGG + chr3_1:55487972-55487991 Msa0363300:CDS 50.0%
CTATGTGCTGCATGCAAGGA+AGG + chr3_1:55488457-55488476 Msa0363300:CDS 50.0%
ATGAAGGGATTGAGGTAGGC+GGG - chr3_1:55488502-55488521 None:intergenic 50.0%
CATGAAGGGATTGAGGTAGG+CGG - chr3_1:55488503-55488522 None:intergenic 50.0%
! CGGTGCTCTGCCATTGTTTT+TGG - chr3_1:55488631-55488650 None:intergenic 50.0%
!! GCAGCAAACTACCGATTTGG+TGG - chr3_1:55488683-55488702 None:intergenic 50.0%
!! GGTAGTTTGCTGCCTAAACC+AGG + chr3_1:55488690-55488709 Msa0363300:CDS 50.0%
!! GCAAACTTAGGTTGATCCCC+TGG - chr3_1:55488711-55488730 None:intergenic 50.0%
! ACGATGCAGCGGATTTCGAA+AGG + chr3_1:55489650-55489669 Msa0363300:CDS 50.0%
! CGATGCAGCGGATTTCGAAA+GGG + chr3_1:55489651-55489670 Msa0363300:CDS 50.0%
TTACCCGCAAGATTTGTCGG+CGG + chr3_1:55490084-55490103 Msa0363300:CDS 50.0%
ACCAGCAGATAGGCCAAACT+TGG + chr3_1:55490245-55490264 Msa0363300:CDS 50.0%
ACCAAGTTTGGCCTATCTGC+TGG - chr3_1:55490249-55490268 None:intergenic 50.0%
CATAGAAGGCAGCAGTCACT+CGG - chr3_1:55490925-55490944 None:intergenic 50.0%
GAGTGACTGCTGCCTTCTAT+GGG + chr3_1:55490924-55490943 Msa0363300:CDS 50.0%
CTGCATGTGAAGCTGTTTGC+AGG + chr3_1:55491002-55491021 Msa0363300:CDS 50.0%
!! GGAAAGCATCCCAACACAGA+TGG + chr3_1:55491248-55491267 Msa0363300:CDS 50.0%
! GTCTTGGTGACCATCTGTGT+TGG - chr3_1:55491261-55491280 None:intergenic 50.0%
AGGATTCACTTTGTGCCACC+AGG + chr3_1:55491301-55491320 Msa0363300:CDS 50.0%
GGATTCACTTTGTGCCACCA+GGG + chr3_1:55491302-55491321 Msa0363300:CDS 50.0%
AGACGCATCTTGTGTGTTCC+AGG + chr3_1:55491628-55491647 Msa0363300:CDS 50.0%
CGTCTAGCTGAAGATCTGCA+TGG - chr3_1:55491950-55491969 None:intergenic 50.0%
!! CGCTATAATGGGCAGAGTTG+AGG + chr3_1:55492199-55492218 Msa0363300:CDS 50.0%
TACCACTTGACGCCACTGTT+AGG - chr3_1:55492328-55492347 None:intergenic 50.0%
CAGCGCTTCTTATTCCAGGT+GGG + chr3_1:55492351-55492370 Msa0363300:CDS 50.0%
GGCTGTTGATCGTAGTTTCC+GGG + chr3_1:55492526-55492545 Msa0363300:CDS 50.0%
AGACATTCCATTCGGAGGCA+AGG + chr3_1:55492562-55492581 Msa0363300:CDS 50.0%
! CTGGTTCCTTTAGGAACCAC+TGG - chr3_1:55492623-55492642 None:intergenic 50.0%
GCATCAATTCATCGCGTCTC+TGG + chr3_1:55492663-55492682 Msa0363300:CDS 50.0%
GTTGGAGACGCATGTGATGA+TGG + chr3_1:55492806-55492825 Msa0363300:CDS 50.0%
TATGGATAAGCAGGTCGTCG+GGG - chr3_1:55492847-55492866 None:intergenic 50.0%
CTATGGATAAGCAGGTCGTC+GGG - chr3_1:55492848-55492867 None:intergenic 50.0%
GCAACAATACTACTGGGGCA+AGG - chr3_1:55493058-55493077 None:intergenic 50.0%
CATCAGAAGGCAAGACTGCC+AGG + chr3_1:55485731-55485750 Msa0363300:CDS 55.0%
GGCCTCAAACCAATTGGTCC+TGG + chr3_1:55487637-55487656 Msa0363300:CDS 55.0%
CTGTCGACGGAACGTCTTCT+GGG - chr3_1:55487723-55487742 None:intergenic 55.0%
ACTGTCGACGGAACGTCTTC+TGG - chr3_1:55487724-55487743 None:intergenic 55.0%
TTTGTGTGCCACAGAAGGCG+TGG + chr3_1:55488124-55488143 Msa0363300:intron 55.0%
GAAATCGGATGGCATCCGTG+AGG + chr3_1:55488759-55488778 Msa0363300:intron 55.0%
GCTGCTACCTCTGATGCAGT+TGG - chr3_1:55489613-55489632 None:intergenic 55.0%
TGCATCAGAGGTAGCAGCCT+TGG + chr3_1:55489615-55489634 Msa0363300:CDS 55.0%
GAGGTAGCAGCCTTGGTTGT+AGG + chr3_1:55489622-55489641 Msa0363300:CDS 55.0%
TGCACCGCCGACAAATCTTG+CGG - chr3_1:55490091-55490110 None:intergenic 55.0%
CAACCACAAATGGCCGGAGA+TGG + chr3_1:55490194-55490213 Msa0363300:CDS 55.0%
CAACCATCTCCGGCCATTTG+TGG - chr3_1:55490200-55490219 None:intergenic 55.0%
CGAGTGACTGCTGCCTTCTA+TGG + chr3_1:55490923-55490942 Msa0363300:CDS 55.0%
ACTGCTGCCTTCTATGGGTC+TGG + chr3_1:55490929-55490948 Msa0363300:CDS 55.0%
TTCGGCACCAGACCCATAGA+AGG - chr3_1:55490939-55490958 None:intergenic 55.0%
ACTTTGTGCCACCAGGGTCT+GGG + chr3_1:55491308-55491327 Msa0363300:CDS 55.0%
AATTTCTCCCCAGACCCTGG+TGG - chr3_1:55491319-55491338 None:intergenic 55.0%
CGGTTCCCCAAAATGATGCC+TGG - chr3_1:55491492-55491511 None:intergenic 55.0%
GTCCTAACAGTGGCGTCAAG+TGG + chr3_1:55492323-55492342 Msa0363300:CDS 55.0%
GCAGCGCTTCTTATTCCAGG+TGG + chr3_1:55492350-55492369 Msa0363300:CDS 55.0%
GAATGAGCAGTTCTCCCACC+TGG - chr3_1:55492368-55492387 None:intergenic 55.0%
GTGGGAGAACTGCTCATTCC+AGG + chr3_1:55492369-55492388 Msa0363300:CDS 55.0%
ACGACAACCTTGCCTCCGAA+TGG - chr3_1:55492572-55492591 None:intergenic 55.0%
GGAGGCAAGGTTGTCGTTCT+AGG + chr3_1:55492575-55492594 Msa0363300:CDS 55.0%
!! GCAGAATGGGTATTGGGCGT+TGG + chr3_1:55492773-55492792 Msa0363300:CDS 55.0%
!! TGGGTATTGGGCGTTGGTGA+TGG + chr3_1:55492779-55492798 Msa0363300:CDS 55.0%
!! GGCGTTGGTGATGGTGTTGT+TGG + chr3_1:55492788-55492807 Msa0363300:CDS 55.0%
CATCACCTCCACGCCTTCTG+TGG - chr3_1:55488135-55488154 None:intergenic 60.0%
! CACAGAAGGCGTGGAGGTGA+TGG + chr3_1:55488133-55488152 Msa0363300:intron 60.0%
GATTGAGGTAGGCGGGCGAA+TGG - chr3_1:55488495-55488514 None:intergenic 60.0%
GCACCGCCGACAAATCTTGC+GGG - chr3_1:55490090-55490109 None:intergenic 60.0%
CACTTTGTGCCACCAGGGTC+TGG + chr3_1:55491307-55491326 Msa0363300:CDS 60.0%
CTTTGTGCCACCAGGGTCTG+GGG + chr3_1:55491309-55491328 Msa0363300:CDS 60.0%
TTGCGCGGCCAGAAGTAGTG+TGG + chr3_1:55491560-55491579 Msa0363300:CDS 60.0%
GCGTCTCTGGCGTCATTGTG+AGG + chr3_1:55492676-55492695 Msa0363300:CDS 60.0%
! GTGTGCCACAGAAGGCGTGG+AGG + chr3_1:55488127-55488146 Msa0363300:intron 65.0%
AGGCAGCAGTCACTCGGTCG+TGG - chr3_1:55490919-55490938 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 55485694 55493108 55485694 ID=Msa0363300;Name=Msa0363300
chr3_1 mRNA 55485694 55493108 55485694 ID=Msa0363300-mRNA-1;Parent=Msa0363300;Name=Msa0363300-mRNA-1;_AED=0.44;_eAED=0.44;_QI=0|0|0|0.2|1|1|10|0|1449
chr3_1 exon 55485694 55485771 55485694 ID=Msa0363300-mRNA-1:exon:10154;Parent=Msa0363300-mRNA-1
chr3_1 exon 55486243 55486362 55486243 ID=Msa0363300-mRNA-1:exon:10155;Parent=Msa0363300-mRNA-1
chr3_1 exon 55487406 55487475 55487406 ID=Msa0363300-mRNA-1:exon:10156;Parent=Msa0363300-mRNA-1
chr3_1 exon 55487584 55487772 55487584 ID=Msa0363300-mRNA-1:exon:10157;Parent=Msa0363300-mRNA-1
chr3_1 exon 55487915 55488046 55487915 ID=Msa0363300-mRNA-1:exon:10158;Parent=Msa0363300-mRNA-1
chr3_1 exon 55488138 55488227 55488138 ID=Msa0363300-mRNA-1:exon:10159;Parent=Msa0363300-mRNA-1
chr3_1 exon 55488349 55488736 55488349 ID=Msa0363300-mRNA-1:exon:10160;Parent=Msa0363300-mRNA-1
chr3_1 exon 55489423 55490348 55489423 ID=Msa0363300-mRNA-1:exon:10161;Parent=Msa0363300-mRNA-1
chr3_1 exon 55490447 55491649 55490447 ID=Msa0363300-mRNA-1:exon:10162;Parent=Msa0363300-mRNA-1
chr3_1 exon 55491955 55493108 55491955 ID=Msa0363300-mRNA-1:exon:10163;Parent=Msa0363300-mRNA-1
chr3_1 CDS 55485694 55485771 55485694 ID=Msa0363300-mRNA-1:cds;Parent=Msa0363300-mRNA-1
chr3_1 CDS 55486243 55486362 55486243 ID=Msa0363300-mRNA-1:cds;Parent=Msa0363300-mRNA-1
chr3_1 CDS 55487406 55487475 55487406 ID=Msa0363300-mRNA-1:cds;Parent=Msa0363300-mRNA-1
chr3_1 CDS 55487584 55487772 55487584 ID=Msa0363300-mRNA-1:cds;Parent=Msa0363300-mRNA-1
chr3_1 CDS 55487915 55488046 55487915 ID=Msa0363300-mRNA-1:cds;Parent=Msa0363300-mRNA-1
chr3_1 CDS 55488138 55488227 55488138 ID=Msa0363300-mRNA-1:cds;Parent=Msa0363300-mRNA-1
chr3_1 CDS 55488349 55488736 55488349 ID=Msa0363300-mRNA-1:cds;Parent=Msa0363300-mRNA-1
chr3_1 CDS 55489423 55490348 55489423 ID=Msa0363300-mRNA-1:cds;Parent=Msa0363300-mRNA-1
chr3_1 CDS 55490447 55491649 55490447 ID=Msa0363300-mRNA-1:cds;Parent=Msa0363300-mRNA-1
chr3_1 CDS 55491955 55493108 55491955 ID=Msa0363300-mRNA-1:cds;Parent=Msa0363300-mRNA-1
Gene Sequence

>Msa0363300

ATGGCTGGTATATATCTTGCCATGCAAAAAGAAGGAACATCAGAAGGCAAGACTGCCAGGCCAAAAAACTACGAAAAACTTTTACTCGGCGGTTTCAAAACGGTTATCGTTGATAATCTTGATAATTCTTCTGAAGTTGCTGTTCATAGAGTTAAGGAACTCGCTGCTGAATTTGGAAATAACCTCAATTTTCATAAGGCTCATGCTGTGTTTTTTATCATTGTTTATCGGAAATGGAATCCGCTAAAAGGCGCAAAACCAACGGTATCTGACACTCCATCAACGCATAAAGACAATGGAACTTTACCGTTAGATAAAGTAGGCCTCAAACCAATTGGTCCTGGAAAATATAGTCTAAGGCATGTGGGAAATCAAAGTAGTGGTCTCAGAATTCAAAACATATGCCCAGAAGACGTTCCGTCGACAGTTTCCAATCAATACACTTACGATAATGAAGGAGATGACATTGATATAAGCGATAGTGAAACACTATCGGATGAATCGGATGTGGATGAGATTGAACCCCCGCATGATTGGTTTAATTGCGCACAAAATAGAGAGCAGTATGATGTTCCTGACAATGATTATGAAGGCGTGGAGGTGATGGAAAACATCTTGCCATCTAAAAAAAGGACAAGACGCAAGAGAACAAAATTATTGGTTGAATCCGATATAGTTGAATATTTCGATGTTGGGGAACCGCGATATGTTTGTAAGGATTGCAACGCATTAATGTGGTATGAAGAAAGGGAAAATAAAAACAGGCGCACGTCAACGCCAGAATTTTCTATGTGCTGCATGCAAGGAAGGATAGAGATTGCACCATTCGCCCGCCTACCTCAATCCCTTCATGAGTTGTACTTTAAAGATGATAGAAAGAGCAAATATTTTTTGGATAACATTAGATCATTTAACAGCATGTTCGCCTTCACTTCAATTGGTGCAAAGATCGATAAGACCAAAAACAATGGCAGAGCACCGCCAGTTTTTACAATGAATGGAGAAAATTACCACCAAATCGGTAGTTTGCTGCCTAAACCAGGGGATCAACCTAAGTTTGCACAATTGATGGACGACGATAGAAATTCTTTGAGATCAAGTATTGTTGACGAGTTAAGGCATATGCTTGATGCTGCAAATTCATTTGTTAAGTCATATAGGTTGGTGAGAGATAAATTACTTCAGTCAGAAACTCCAACTATAAAGCTACACTTATTGGGTAAAAGGGGATACGATGGTCGGCGTTATAATGCACCAACTGCATCAGAGGTAGCAGCCTTGGTTGTAGGTGATTACGATGCAGCGGATTTCGAAAGGGACATCATTGTTGAGTGTGTGTCAGGTCTGCTCAAACGTATATCCGTTTTTGAGACATCATACCTGGCACTACAATATCCATTAATATTCTCTCGCGGTGAAGACGGTTTTCGACGAGATATTCAATTTTCAGAAAAAGAAACAAAGAATCCCATCAAAAGAGTTTTTGTGTCAATGAAAGAGTGGTTTGCGTACAAATTGCAACAAAGGGTCGATGATCAAGGAGCATTATTGTATTCCAGAAAGTTGTTGCAGCAATTTTGTTGCGATGGATTTAGCATGATCGAGTCTTGGCGATTAAAATGGTATCGTGATCACCAAAAAGATGTTAGAGCTGATATGTACAAGGGATTATATGAAGCGGTGCTTAGAAGCGAGAACAATCCAAGTTCAGTGGGAAAAAGGGTTGTGTTACCCGCAAGATTTGTCGGCGGTGCACGTTACATGATTCAAAATTATCAAGATGCAATGGCAATATGTTCTTGGATTGGTTATCCTAATATTTTCATTACATTTACATGCAACCACAAATGGCCGGAGATGGTTGCATACTTAAACAAACACAATTTGAAACCAGCAGATAGGCCAAACTTGGTGAGCAGAATTTTTAAAATTAAGCTTAATCATTTAATTCAAGAGATACGGAATGGAAAGATATTCGGCAAAGTCAAAGCAGTTATTTATACAATTGAATTTCAAAAACGAGGACTTCCTCATGCTCATATTTTGGTGTTCCTCCATCCCGATTTTCGAATTGTTCATCCAAGTAATATTGACAAGATAATATGTGCTGAAATTCCTGACAAAGGAAAAAATCCCGAGCTCTACAATATTGTCTCATCCCTTATGATACATGGACCATGTGGTGATGAAAATATTAATTCACCGTGTACGATAAATGGGAAGTGTACGAAGTATTTTCCAAAAAGATATGTCGACAGCACCGTTATTGATGCTGACGGTTACCCGGTTTACAGAAGAAGGGACAATGGTGTAACTATTCAAAAAGGTGATTCATTTGCCGATAATAGATACGTTGTCCCATACAACCCACAATTGATGCTGAAATTTAATGCCCATATTAATGTTGAATGGTGCAATCAATCACGTTCTATCAAATATTTGTTCAAGTACGTTAACAAGGGCCACGACCGAGTGACTGCTGCCTTCTATGGGTCTGGTGCCGAATCTTGCGATGAAATTAAAATGTATTATGATTGTCGTTATTTGTCTGCATGTGAAGCTGTTTGCAGGATTTTTTCTTTCGATATTAATTATAGATATCCTTCCGAAGAACGATTGAGTTTTCATTTGGAAGGAGAAGAGCCTATTATGTTTGAAGATGATGACGACTTAGAGGATGTTCTAAATAAACCACATATTCGTGACACAAAATTTTTGGCTTGGATGGAGGCAAACAAGATATATGCCGATGCAAAGGATCTCACTTATGGGGAATTCCCATTGAAATTTACTTGGAAAGCATCCCAACACAGATGGTCACCAAGACAAAGAGGTGTATCAGTTGGAAGGATTCACTTTGTGCCACCAGGGTCTGGGGAGAAATTTTACTTGCGCACCTTATTGAATTATGTAAAGGGCCCAACTTCTTATGATGAAATTAAAACAGTGAAAGACATCAAATACAACTCCTTTAAGGAGACTTGCTTCGTATTAGGTTTGTTGGAAGATGACAAAGAGTTTATTGATGCCATTAACCAGGCATCATTTTGGGGAACCGCTGATTTTATGAGAAGATTATTTGTTACGTTGCTGCTTACAAATCAATTTGCGCGGCCAGAAGTAGTGTGGTCTAAAACATGGGAGAATCTAAGTGATGATATAGTGTATCGCCAAAGACGCATCTTGTGTGTTCCAGATCTTCAGCTAGACGAAGAACAAATAAAAAGCTATGCCCTTGCAGAAATTGAAAAGCTACAACAGTCCCACGGAAAAAATTTCAAGGACCACTATCCGTCTATGCCAAGAACTGATGTCGCTATAAATAGTGCTGGGCTTAATAGATTGATTTATGATGAATTGAGATACAACAAAGATTCATTGAAAGAGGAGCATGATCGGTTGATGTCAACGATGACCACTGAACAAAAAAATATTTACGACGCTATAATGGGCAGAGTTGAGGCAAATAAACAAGGTTTATTTTTTTTATATGGGTACGGTGGTACAGGAAAAACTTTTATTTGGAGAGCTATGTCATCTGCATTGAGATCCAAAGGACAAATTGTCCTAACAGTGGCGTCAAGTGGTATAGCAGCGCTTCTTATTCCAGGTGGGAGAACTGCTCATTCCAGGTTCCATATACCATTCATTGTTGACGAATGTTTAACTTGCACCATTGAACCATTAAGCCCATTGGGGCAATTGATATTGCGCGCAAAAATAATAATATGGGACGAAGCGCCAATGATGCACAAGCATTGTTTTGAGGCTGTTGATCGTAGTTTCCGGGATGTATGCAAAGCAGACATTCCATTCGGAGGCAAGGTTGTCGTTCTAGGTGATGACTTTCGGCAAATTCTACCAGTGGTTCCTAAAGGAACCAGACAAGACATAATAAACGCAAGCATCAATTCATCGCGTCTCTGGCGTCATTGTGAGGTTTTAACACTAACTACCAATATGAGACTTTTGCACGGTTGTTCAGATGCTGATGTAGAAGAGTTAAAAGAATTTGCAGAATGGGTATTGGGCGTTGGTGATGGTGTTGTTGGAGACGCATGTGATGATGGAATTAATTTGCATATCCCCGACGACCTGCTTATCCATAGTTCAGGTGATCATGTTACATCTATTGTCGAATGCATTTACCCTTCTATTTTGCATAATATGAATGATCCAGAGTATTTTAAAAATAGAGCTATTTTAACGCCAAAAAATCTGATTGTCGAAGAAATTAACAATTATGTTATGTCTTTGATAACCGATGAAGAAAGAACATATTTGAGTTGTGATTCACCTTGCCCCAGTAGTATTGTTGCTAACAGGCCTGATGATGTTCACACACCATAA

Protein sequence

>Msa0363300

MAGIYLAMQKEGTSEGKTARPKNYEKLLLGGFKTVIVDNLDNSSEVAVHRVKELAAEFGNNLNFHKAHAVFFIIVYRKWNPLKGAKPTVSDTPSTHKDNGTLPLDKVGLKPIGPGKYSLRHVGNQSSGLRIQNICPEDVPSTVSNQYTYDNEGDDIDISDSETLSDESDVDEIEPPHDWFNCAQNREQYDVPDNDYEGVEVMENILPSKKRTRRKRTKLLVESDIVEYFDVGEPRYVCKDCNALMWYEERENKNRRTSTPEFSMCCMQGRIEIAPFARLPQSLHELYFKDDRKSKYFLDNIRSFNSMFAFTSIGAKIDKTKNNGRAPPVFTMNGENYHQIGSLLPKPGDQPKFAQLMDDDRNSLRSSIVDELRHMLDAANSFVKSYRLVRDKLLQSETPTIKLHLLGKRGYDGRRYNAPTASEVAALVVGDYDAADFERDIIVECVSGLLKRISVFETSYLALQYPLIFSRGEDGFRRDIQFSEKETKNPIKRVFVSMKEWFAYKLQQRVDDQGALLYSRKLLQQFCCDGFSMIESWRLKWYRDHQKDVRADMYKGLYEAVLRSENNPSSVGKRVVLPARFVGGARYMIQNYQDAMAICSWIGYPNIFITFTCNHKWPEMVAYLNKHNLKPADRPNLVSRIFKIKLNHLIQEIRNGKIFGKVKAVIYTIEFQKRGLPHAHILVFLHPDFRIVHPSNIDKIICAEIPDKGKNPELYNIVSSLMIHGPCGDENINSPCTINGKCTKYFPKRYVDSTVIDADGYPVYRRRDNGVTIQKGDSFADNRYVVPYNPQLMLKFNAHINVEWCNQSRSIKYLFKYVNKGHDRVTAAFYGSGAESCDEIKMYYDCRYLSACEAVCRIFSFDINYRYPSEERLSFHLEGEEPIMFEDDDDLEDVLNKPHIRDTKFLAWMEANKIYADAKDLTYGEFPLKFTWKASQHRWSPRQRGVSVGRIHFVPPGSGEKFYLRTLLNYVKGPTSYDEIKTVKDIKYNSFKETCFVLGLLEDDKEFIDAINQASFWGTADFMRRLFVTLLLTNQFARPEVVWSKTWENLSDDIVYRQRRILCVPDLQLDEEQIKSYALAEIEKLQQSHGKNFKDHYPSMPRTDVAINSAGLNRLIYDELRYNKDSLKEEHDRLMSTMTTEQKNIYDAIMGRVEANKQGLFFLYGYGGTGKTFIWRAMSSALRSKGQIVLTVASSGIAALLIPGGRTAHSRFHIPFIVDECLTCTIEPLSPLGQLILRAKIIIWDEAPMMHKHCFEAVDRSFRDVCKADIPFGGKVVVLGDDFRQILPVVPKGTRQDIINASINSSRLWRHCEVLTLTTNMRLLHGCSDADVEELKEFAEWVLGVGDGVVGDACDDGINLHIPDDLLIHSSGDHVTSIVECIYPSILHNMNDPEYFKNRAILTPKNLIVEEINNYVMSLITDEERTYLSCDSPCPSSIVANRPDDVHTP*