AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0568710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0568710 MtrunA17_Chr8g0383631 96.200 842 2 1 1 842 1 812 0.0 1684
Msa0568710 MtrunA17_Chr3g0079701 90.296 845 38 3 1 842 1 804 0.0 1564
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0568710 AT2G21790.1 81.206 846 125 2 1 842 1 816 0.0 1462

Find 246 sgRNAs with CRISPR-Local

Find 374 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGGTGCCTGATCTCTTTA+TGG 0.175397 4_1:-70319178 Msa0568710:CDS
TGCTGATATATTTGAGTTCT+TGG 0.186515 4_1:-70319380 Msa0568710:CDS
TAAGCAGAGGAGACCTATTT+TGG 0.217017 4_1:+70316378 None:intergenic
GACCTTTCTGCAGTTTCAAC+TGG 0.230257 4_1:+70318238 None:intergenic
ATGTTTATTCAATTACATTT+TGG 0.237143 4_1:-70316403 Msa0568710:three_prime_UTR
TCCCAGATCTATGATTAAAA+TGG 0.249718 4_1:+70320275 None:intergenic
GCAGTTGAGTAGTTGCTTCT+TGG 0.257108 4_1:-70319746 Msa0568710:intron
ATTGAAAATACCTTGCTTAC+AGG 0.257684 4_1:+70317925 None:intergenic
AAACTAGGGTTACGTAATTA+TGG 0.258873 4_1:+70320923 None:intergenic
GTGGGATTGGGGTGCACTTC+GGG 0.263837 4_1:-70317707 Msa0568710:CDS
ACCTGGTTTGGCAGATTGTT+GGG 0.280285 4_1:-70319106 Msa0568710:CDS
ATCCAATCAACAATCAAATA+TGG 0.286834 4_1:-70316216 Msa0568710:three_prime_UTR
ACCCATTGGTATTGGAGTTC+AGG 0.293692 4_1:-70318200 Msa0568710:CDS
TCCCTCCAATTTGTGGGATT+GGG 0.296736 4_1:-70317719 Msa0568710:CDS
CTCCCTCCAATTTGTGGGAT+TGG 0.303419 4_1:-70317720 Msa0568710:CDS
TCTTCACGATTTGACTGAAA+TGG 0.304516 4_1:-70317441 Msa0568710:CDS
GCAAAAGATATTGGTTGATA+TGG 0.309843 4_1:-70317226 Msa0568710:CDS
GGAGATCAAGCAAAAGATAT+TGG 0.313276 4_1:-70317235 Msa0568710:CDS
ATTCCAAACAAATCACAAAA+TGG 0.314668 4_1:+70319496 None:intergenic
AATAATTATCAGAACTGTTT+GGG 0.316340 4_1:-70317256 Msa0568710:intron
ATTTGATTGTTGATTGGATT+TGG 0.318745 4_1:+70316220 None:intergenic
TCCCGCGAGAATGTGAAAAT+TGG 0.323833 4_1:+70321005 None:intergenic
ACTACCACTATAAGTTTCAT+AGG 0.325914 4_1:+70317948 None:intergenic
GAAAAGCAACCAGCAGAATC+TGG 0.327390 4_1:-70318743 Msa0568710:CDS
TAATAATTATCAGAACTGTT+TGG 0.328369 4_1:-70317257 Msa0568710:intron
AAAATTACGGATGCATAATC+AGG 0.331516 4_1:+70320555 None:intergenic
ACTTTCTGAGCGACTAAAAC+AGG 0.342022 4_1:+70320663 None:intergenic
GTGCTTCATTGGGGCAGAAC+AGG 0.346214 4_1:+70319127 None:intergenic
CGGCACAGACCCATTGGTAT+TGG 0.349426 4_1:-70318208 Msa0568710:CDS
TGCACCCCAATCCCACAAAT+TGG 0.350482 4_1:+70317714 None:intergenic
GTTGAAAATTGAAGTGGAAA+TGG 0.358585 4_1:+70321031 None:intergenic
CACCTGGTTTGGCAGATTGT+TGG 0.366008 4_1:-70319107 Msa0568710:CDS
GCCAAACCAGGTGCTTCATT+GGG 0.366941 4_1:+70319117 None:intergenic
TTGAAGTCACAGATAGAAAC+TGG 0.367181 4_1:-70318897 Msa0568710:CDS
CTTCACGATTTGACTGAAAT+GGG 0.371085 4_1:-70317440 Msa0568710:CDS
ATCCATATTTGATTGTTGAT+TGG 0.373913 4_1:+70316214 None:intergenic
GAGTGTTATGTGATTGTTGT+AGG 0.375669 4_1:-70319433 Msa0568710:CDS
TGGAAAGAGTTCAGAGCAAC+GGG 0.378407 4_1:-70319158 Msa0568710:CDS
TGCCAAACCAGGTGCTTCAT+TGG 0.378584 4_1:+70319116 None:intergenic
GCATCTACCAGTCAAATTCT+TGG 0.379695 4_1:-70317628 Msa0568710:CDS
GTTCGATTGTGGATTGGATT+TGG 0.381117 4_1:+70320794 None:intergenic
AGTAAATCTGCAGGAGGAAT+TGG 0.384277 4_1:-70319661 Msa0568710:CDS
TCATCTGACTCCTTCACCTT+AGG 0.386176 4_1:+70316806 None:intergenic
TTGTAGATATTAGAAGTATA+TGG 0.388878 4_1:+70317586 None:intergenic
TGACGGCGATGGATTTAGTT+GGG 0.391194 4_1:+70320820 None:intergenic
CCCCAATGAAGCACCTGGTT+TGG 0.394351 4_1:-70319118 Msa0568710:CDS
TGCCATTCCTAGTAGTATAA+AGG 0.395597 4_1:+70318165 None:intergenic
TTCAAATGCCAATCCATACT+TGG 0.397895 4_1:-70316602 Msa0568710:three_prime_UTR
TTGAAAATTGAAGTGGAAAT+GGG 0.405385 4_1:+70321032 None:intergenic
GATGGCATCACTTGCAGCTC+GGG 0.408547 4_1:+70316956 None:intergenic
GTGCCCATGGTAGTTACATT+CGG 0.409991 4_1:-70319618 Msa0568710:CDS
AGAGAGGTCTTATCTGTTGA+AGG 0.416190 4_1:-70320025 Msa0568710:CDS
CCCATTGGTATTGGAGTTCA+GGG 0.416868 4_1:-70318199 Msa0568710:CDS
TACTGCCCGTTATGTTGATC+AGG 0.419732 4_1:-70319542 Msa0568710:CDS
CTGACGGCGATGGATTTAGT+TGG 0.420058 4_1:+70320819 None:intergenic
GGAAGTAAGCTTTCCAAAGT+TGG 0.423469 4_1:+70317143 None:intergenic
TCTTATCTGTTGAAGGTTCA+AGG 0.428310 4_1:-70320018 Msa0568710:CDS
CATCACTTGCAGCTCGGGTT+CGG 0.428325 4_1:+70316961 None:intergenic
TGTGACTCCCTCCAATTTGT+GGG 0.428684 4_1:-70317725 Msa0568710:CDS
GAAGTAAGCTTTCCAAAGTT+GGG 0.430569 4_1:+70317144 None:intergenic
ACCCACTCACGTTTCAGAAA+AGG 0.433865 4_1:+70320382 None:intergenic
AGATTGAAGATACTTGGTTA+TGG 0.435840 4_1:-70316156 Msa0568710:three_prime_UTR
TGCCCATGGTAGTTACATTC+GGG 0.439894 4_1:-70319617 Msa0568710:CDS
ATAGTGAGATAATCTATGAT+AGG 0.440293 4_1:-70320083 Msa0568710:CDS
GAAGTTAATTTCCCACGTTA+AGG 0.441872 4_1:+70316298 None:intergenic
CACATGGATAAACCCAACTT+TGG 0.442315 4_1:-70317156 Msa0568710:CDS
CATCTTGTTCGATTGTGGAT+TGG 0.442984 4_1:+70320788 None:intergenic
TAGGTGTTCCAGCATTGAAA+AGG 0.446161 4_1:+70319866 None:intergenic
GGAACAAATGGAACGTCTAA+TGG 0.447356 4_1:-70319595 Msa0568710:CDS
CTCATCAGTCTAAGCTTGTT+GGG 0.451276 4_1:-70318492 Msa0568710:CDS
CATGCCTCCTTCATGCCAAC+AGG 0.452475 4_1:+70316681 None:intergenic
CCCTCCAATTTGTGGGATTG+GGG 0.452935 4_1:-70317718 Msa0568710:CDS
TCTCATCAGTCTAAGCTTGT+TGG 0.453961 4_1:-70318493 Msa0568710:CDS
TATTGATTCAGTTGGCTGCT+AGG 0.459799 4_1:-70320442 Msa0568710:intron
TGGTAGATGCAGTTGGCATA+GGG 0.460342 4_1:+70317641 None:intergenic
GAGTTCAGAGCAACGGGGAA+TGG 0.461034 4_1:-70319152 Msa0568710:CDS
TTGGAATTGAAAATAAATCA+TGG 0.462083 4_1:-70319361 Msa0568710:CDS
AATGTAATTGAATAAACATT+GGG 0.462492 4_1:+70316407 None:intergenic
GTGTGACTCCCTCCAATTTG+TGG 0.463050 4_1:-70317726 Msa0568710:CDS
AGTTACATTCGGGGAACAAA+TGG 0.464068 4_1:-70319607 Msa0568710:CDS
GAAGATTTCCAAGTATGGAT+TGG 0.466250 4_1:+70316594 None:intergenic
GGTTCATTTCGACAAGATAA+CGG 0.466469 4_1:-70320733 Msa0568710:CDS
TACTATAGGATGCTTGCAAT+AGG 0.466750 4_1:-70318765 Msa0568710:intron
TATATGACTTTCAGTTCAGC+AGG 0.467188 4_1:+70317347 None:intergenic
AAGTGGAAATGGGTATAAGA+TGG 0.469556 4_1:+70321042 None:intergenic
AGGGATTTATGATACATTGA+AGG 0.472331 4_1:-70319698 Msa0568710:CDS
ATAATCTTATTCTTAAGTGC+AGG 0.473123 4_1:+70317407 None:intergenic
GATTTAGAATGCGGCCCGAT+TGG 0.474630 4_1:-70320106 Msa0568710:intron
TCAACAGATAAGACCTCTCT+AGG 0.477274 4_1:+70320028 None:intergenic
AGATTATCTCACTATCCAAT+CGG 0.478302 4_1:+70320091 None:intergenic
TGTGGGATTGGGGTGCACTT+CGG 0.478406 4_1:-70317708 Msa0568710:CDS
AAAATAGGTCTCCTCTGCTT+AGG 0.478626 4_1:-70316376 Msa0568710:three_prime_UTR
ATGAAAGAGGATAGTATTGA+AGG 0.478961 4_1:-70319718 Msa0568710:CDS
TGCTGGAACACCTAGGCCTC+AGG 0.482052 4_1:-70319857 Msa0568710:intron
TCCTCCCTGATCAACATAAC+GGG 0.482583 4_1:+70319537 None:intergenic
CTGGTAGATGCAGTTGGCAT+AGG 0.486502 4_1:+70317640 None:intergenic
TGTGAATTAGCTGCAAAAGA+AGG 0.487389 4_1:-70317973 Msa0568710:CDS
AAGTTCACTGTTGATACCTC+TGG 0.488511 4_1:-70316933 Msa0568710:CDS
ACGTACATCTTGTTCGATTG+TGG 0.489486 4_1:+70320783 None:intergenic
GGTATCAACAGTGAACTTGA+TGG 0.492813 4_1:+70316938 None:intergenic
GCACACCATCTGTGCCATCT+TGG 0.493955 4_1:+70316769 None:intergenic
ACGGCAAGATTGAAGATACT+TGG 0.495268 4_1:-70316162 Msa0568710:three_prime_UTR
ATTTGCACCTGTTGGCATGA+AGG 0.497330 4_1:-70316688 Msa0568710:three_prime_UTR
AAAGGTGAGATTTGAAAACT+AGG 0.501762 4_1:+70320908 None:intergenic
CTACCACTATAAGTTTCATA+GGG 0.505961 4_1:+70317949 None:intergenic
TTGCCGTGTACTTGGAGCCA+TGG 0.506004 4_1:-70319405 Msa0568710:CDS
GGGTATAAGATGGGTAGGGT+AGG 0.506091 4_1:+70321052 None:intergenic
AAATGTAATTGAATAAACAT+TGG 0.507139 4_1:+70316406 None:intergenic
CCCTGAACTCCAATACCAAT+GGG 0.507374 4_1:+70318199 None:intergenic
GCTGATACCTTTATACTACT+AGG 0.508209 4_1:-70318172 Msa0568710:CDS
TAATTGTGCCCAGATTCTGC+TGG 0.508224 4_1:+70318734 None:intergenic
GGAGTCACACCCCACATGTC+AGG 0.510046 4_1:+70317739 None:intergenic
TTCTGCCCCAATGAAGCACC+TGG 0.511533 4_1:-70319123 Msa0568710:CDS
ATCATTTCATGTCTCAGAGA+TGG 0.514754 4_1:-70319909 Msa0568710:CDS
ACTCTTTCCATAAAGAGATC+AGG 0.516899 4_1:+70319171 None:intergenic
TTACACACAGCAGTTTCTGT+TGG 0.517348 4_1:+70318670 None:intergenic
CTTCTTGGTGTGTATGAAAG+AGG 0.518124 4_1:-70319731 Msa0568710:CDS
GAAATGGGTATAAGATGGGT+AGG 0.518135 4_1:+70321047 None:intergenic
TGATGGCATCACTTGCAGCT+CGG 0.518808 4_1:+70316955 None:intergenic
ATGATAATGAGGGTTTCTGT+TGG 0.520458 4_1:-70319970 Msa0568710:CDS
ATCTCTTACATAACGCGGTA+GGG 0.523201 4_1:+70318633 None:intergenic
AACAAGTGTTCATCTAATTG+AGG 0.523503 4_1:+70319472 None:intergenic
GACCTCAACACATGATAATG+AGG 0.523819 4_1:-70319981 Msa0568710:CDS
GTTGTATTTATAGTAGTGAA+AGG 0.525173 4_1:+70320890 None:intergenic
GTTATTGCCAAGAATTTGAC+TGG 0.525519 4_1:+70317621 None:intergenic
GGTGTAGTTTCAACTTCCAC+AGG 0.525819 4_1:+70316718 None:intergenic
CTCCTCCCTGATCAACATAA+CGG 0.526892 4_1:+70319536 None:intergenic
GATTATCTCACTATCCAATC+GGG 0.527787 4_1:+70320092 None:intergenic
CTTAGTAGATTTGCACCTGT+TGG 0.528081 4_1:-70316696 Msa0568710:three_prime_UTR
GGATTTGGTTCTGACGGCGA+TGG 0.529001 4_1:+70320809 None:intergenic
ACCTTTCTGCAGTTTCAACT+GGG 0.529840 4_1:+70318239 None:intergenic
GTTCCAGCATTGAAAAGGGT+TGG 0.530794 4_1:+70319871 None:intergenic
CCTGGTTTGGCAGATTGTTG+GGG 0.532035 4_1:-70319105 Msa0568710:CDS
CAACAGGTGCAAATCTACTA+AGG 0.532721 4_1:+70316697 None:intergenic
TGGAAGGTTGAAAATTGAAG+TGG 0.535997 4_1:+70321025 None:intergenic
TGCAATTACTTTAATGCCAG+AGG 0.537941 4_1:+70316917 None:intergenic
AAAAGCAACCAGCAGAATCT+GGG 0.538023 4_1:-70318742 Msa0568710:CDS
AGTGGAAATGGGTATAAGAT+GGG 0.539385 4_1:+70321043 None:intergenic
CACTTGCAGCTCGGGTTCGG+AGG 0.540278 4_1:+70316964 None:intergenic
TTTGAAAGGGTTTGAAGACT+GGG 0.543205 4_1:-70316995 Msa0568710:intron
TCTAAGCTTGTTGGGAGCAG+AGG 0.544709 4_1:-70318484 Msa0568710:CDS
TGAAAAGGGTTGGAGAAGCA+TGG 0.544864 4_1:+70319881 None:intergenic
GCTTTGTATAGAATTTACTC+TGG 0.545252 4_1:-70316548 Msa0568710:three_prime_UTR
AGGTGTTCCAGCATTGAAAA+GGG 0.546161 4_1:+70319867 None:intergenic
AACTTGCGGCACAGACCCAT+TGG 0.547601 4_1:-70318214 Msa0568710:CDS
AAGGTGAGATTTGAAAACTA+GGG 0.548542 4_1:+70320909 None:intergenic
GGTGAAGGAGTCAGATGATG+AGG 0.548724 4_1:-70316801 Msa0568710:CDS
TAGTGAGATAATCTATGATA+GGG 0.549676 4_1:-70320082 Msa0568710:CDS
TGCATAATCAGGGTGGTTAG+CGG 0.550299 4_1:+70320566 None:intergenic
AGATTGAAGAAACTCAGTTA+CGG 0.550367 4_1:-70320708 Msa0568710:CDS
GGCTAATTCATCAAGTTGAC+TGG 0.551592 4_1:+70320611 None:intergenic
GCTGTTATTAGTAAATCTGC+AGG 0.553103 4_1:-70319670 Msa0568710:CDS
GAATAACGTACCTGAGGCCT+AGG 0.553399 4_1:+70319847 None:intergenic
TGTGTATGAAATTATCATCA+AGG 0.553565 4_1:-70320227 Msa0568710:intron
ACCGCGTTATGTAAGAGATA+AGG 0.553864 4_1:-70318629 Msa0568710:intron
GGCCCCTATGAAACTTATAG+TGG 0.554544 4_1:-70317952 Msa0568710:CDS
CCCCAACAATCTGCCAAACC+AGG 0.559209 4_1:+70319105 None:intergenic
TCCCCGAATGTAACTACCAT+GGG 0.561135 4_1:+70319615 None:intergenic
ATTTGACTGGTAGATGCAGT+TGG 0.562931 4_1:+70317634 None:intergenic
AAAGAGATCAGGCACCCAAA+GGG 0.564159 4_1:+70319182 None:intergenic
GATAATTTCATACACATCAT+CGG 0.564563 4_1:+70320234 None:intergenic
TGGATTGGATTTGGTTCTGA+CGG 0.564711 4_1:+70320803 None:intergenic
TGCTTCATTGGGGCAGAACA+GGG 0.566323 4_1:+70319128 None:intergenic
GACGGCGATGGATTTAGTTG+GGG 0.568603 4_1:+70320821 None:intergenic
GAAGGTTCAAGGAGTGGTTG+TGG 0.569042 4_1:-70320007 Msa0568710:CDS
TCTGTTGAAGGTTCAAGGAG+TGG 0.569467 4_1:-70320013 Msa0568710:CDS
CGTTATGTTGATCAGGGAGG+AGG 0.570595 4_1:-70319535 Msa0568710:CDS
TTGTTCAAGCACAGAGTCTG+TGG 0.573288 4_1:-70318929 Msa0568710:CDS
AATTCTTCAGCCTGACATGT+GGG 0.573350 4_1:-70317749 Msa0568710:CDS
TATCTCTTACATAACGCGGT+AGG 0.575221 4_1:+70318632 None:intergenic
TGAAAGAGGATAGTATTGAA+GGG 0.576753 4_1:-70319717 Msa0568710:CDS
ATGGAAAGAGTTCAGAGCAA+CGG 0.576870 4_1:-70319159 Msa0568710:CDS
GTTTGTGCCGGCGTTTACAA+AGG 0.577884 4_1:-70320642 Msa0568710:CDS
TCTTATATAGGGTTTACCTG+TGG 0.579223 4_1:-70318518 Msa0568710:intron
GTCGCTCAGAAAGTTTGTGC+CGG 0.580015 4_1:-70320654 Msa0568710:CDS
ACCCCAATCCCACAAATTGG+AGG 0.580755 4_1:+70317717 None:intergenic
CAGGGAGGAGGCAAGAGGAA+AGG 0.580785 4_1:-70319523 Msa0568710:CDS
ATTGAAAATAAATCATGGAA+AGG 0.581359 4_1:-70319356 Msa0568710:intron
ACCCTGAACTCCAATACCAA+TGG 0.583702 4_1:+70318198 None:intergenic
AGGGTGGTTAGCGGTCATGC+CGG 0.585896 4_1:+70320575 None:intergenic
GAAAAGGGTTGGAGAAGCAT+GGG 0.586511 4_1:+70319882 None:intergenic
CGGGAGATGATATCAAAGAC+AGG 0.587167 4_1:-70317688 Msa0568710:CDS
ATGTACGTTGTGAAGAGAGA+TGG 0.587284 4_1:-70320768 Msa0568710:CDS
TCTACAATCGCAGAGTGCTA+AGG 0.589399 4_1:-70317570 Msa0568710:intron
TACCTTTATACTACTAGGAA+TGG 0.591337 4_1:-70318167 Msa0568710:CDS
TGCACCTGTTGGCATGAAGG+AGG 0.592841 4_1:-70316685 Msa0568710:three_prime_UTR
GTAGGATCAACCTAAGGTGA+AGG 0.596969 4_1:-70316816 Msa0568710:intron
ACCCTCATTATCATGTGTTG+AGG 0.601973 4_1:+70319979 None:intergenic
TAGTGGTAGTCCTGTAAGCA+AGG 0.602128 4_1:-70317935 Msa0568710:intron
AATAAGATTATCTATGACAA+CGG 0.602344 4_1:-70317395 Msa0568710:CDS
CATGCCGGCAGCAGTTTCAG+CGG 0.602689 4_1:+70320590 None:intergenic
CCCCAATCCCACAAATTGGA+GGG 0.603150 4_1:+70317718 None:intergenic
AAATGGGTATAAGATGGGTA+GGG 0.604206 4_1:+70321048 None:intergenic
TACACATCATCGGCAATCAA+CGG 0.608688 4_1:+70320244 None:intergenic
TAAAGAGATCAGGCACCCAA+AGG 0.610062 4_1:+70319181 None:intergenic
CAACAGATAAGACCTCTCTA+GGG 0.610108 4_1:+70320029 None:intergenic
TCATTGAACACACGCAGCAT+CGG 0.611592 4_1:+70319565 None:intergenic
GTTCACAACATACGTGCCCA+TGG 0.612170 4_1:-70319631 Msa0568710:CDS
GAATTCTTCAGCCTGACATG+TGG 0.613737 4_1:-70317750 Msa0568710:CDS
GGAGCAGAGGCTCTAGTAGT+CGG 0.613742 4_1:-70318471 Msa0568710:CDS
ATGCCATGGCTCCAAGTACA+CGG 0.616372 4_1:+70319402 None:intergenic
ACCCAGTTGAAACTGCAGAA+AGG 0.616552 4_1:-70318240 Msa0568710:CDS
GGTTTCTGTTGGAATTCACA+AGG 0.619618 4_1:-70319959 Msa0568710:CDS
TTCCCCGAATGTAACTACCA+TGG 0.622260 4_1:+70319614 None:intergenic
ACTGCCCGTTATGTTGATCA+GGG 0.623349 4_1:-70319541 Msa0568710:CDS
ATTCTTCAGCCTGACATGTG+GGG 0.624402 4_1:-70317748 Msa0568710:CDS
TTAGACTGATGAGACTCCAC+AGG 0.628766 4_1:+70318502 None:intergenic
TTGGGTTCAAAACCCTAGAG+AGG 0.628996 4_1:-70320041 Msa0568710:CDS
GCGAGAATGTGAAAATTGGA+AGG 0.629011 4_1:+70321009 None:intergenic
TTAGCCGCTGAAACTGCTGC+CGG 0.635948 4_1:-70320594 Msa0568710:CDS
CCAAACCAGGTGCTTCATTG+GGG 0.636999 4_1:+70319118 None:intergenic
AAATTACGGATGCATAATCA+GGG 0.637639 4_1:+70320556 None:intergenic
CTTTCTGAGCGACTAAAACA+GGG 0.637721 4_1:+70320664 None:intergenic
CTGCAGAAAGGTCAAACTTG+CGG 0.641053 4_1:-70318228 Msa0568710:CDS
AATCAAATATGGATGTCAAG+AGG 0.641382 4_1:-70316205 Msa0568710:three_prime_UTR
GAAGAGAGATGGTCGTCAAG+AGG 0.642493 4_1:-70320757 Msa0568710:CDS
GGTAGATGCAGTTGGCATAG+GGG 0.644273 4_1:+70317642 None:intergenic
TAAGATGGGTAGGGTAGGTG+AGG 0.647304 4_1:+70321057 None:intergenic
ACCTCAACACATGATAATGA+GGG 0.647311 4_1:-70319980 Msa0568710:CDS
TGATACCAAGATGGCACAGA+TGG 0.648530 4_1:-70316774 Msa0568710:CDS
AGCATAGGCAAACCTTAACG+TGG 0.650290 4_1:-70316310 Msa0568710:three_prime_UTR
TCAAATATATCAGCATGCCA+TGG 0.653122 4_1:+70319388 None:intergenic
GTTATTAGTAAATCTGCAGG+AGG 0.654429 4_1:-70319667 Msa0568710:CDS
TTGATCAGGGAGGAGGCAAG+AGG 0.655422 4_1:-70319528 Msa0568710:CDS
GAGAGATGGTCGTCAAGAGG+CGG 0.656772 4_1:-70320754 Msa0568710:CDS
GTTGATATGGCTGTTGATCG+AGG 0.657853 4_1:-70317213 Msa0568710:CDS
GACAAACAGAGACGAGTGTG+AGG 0.658465 4_1:-70316741 Msa0568710:CDS
GCGGTAGGGCAATTGATGCA+AGG 0.660696 4_1:+70318647 None:intergenic
TAATTCATCAAGTTGACTGG+TGG 0.662193 4_1:+70320614 None:intergenic
AGAGACGAGTGTGAGGCCTG+TGG 0.669541 4_1:-70316734 Msa0568710:CDS
CAAATATGGATGTCAAGAGG+CGG 0.674810 4_1:-70316202 Msa0568710:three_prime_UTR
AATGGCATTTGATTCACCAG+AGG 0.676603 4_1:-70318149 Msa0568710:intron
TGAGGATGATGATACCAAGA+TGG 0.681385 4_1:-70316783 Msa0568710:CDS
ACCTTATCTCTTACATAACG+CGG 0.684486 4_1:+70318628 None:intergenic
TCAAAGTTTAAATATACACA+TGG 0.684728 4_1:-70317172 Msa0568710:CDS
GTGAATGTAGGATCAACCTA+AGG 0.689066 4_1:-70316822 Msa0568710:intron
GCATAGGCAAACCTTAACGT+GGG 0.692303 4_1:-70316309 Msa0568710:three_prime_UTR
GGTAACGCCTTTGTAAACGC+CGG 0.692435 4_1:+70320635 None:intergenic
CTAATGACAGGTTACTGCTG+TGG 0.697818 4_1:-70318302 Msa0568710:intron
GCAGGCTCAACAGTTAAACA+AGG 0.698840 4_1:-70318037 Msa0568710:intron
GCCCATGGTAGTTACATTCG+GGG 0.698966 4_1:-70319616 Msa0568710:CDS
GCCCGTTATGTTGATCAGGG+AGG 0.705919 4_1:-70319538 Msa0568710:CDS
ATTTGACTGAAATGGGACTG+TGG 0.706027 4_1:-70317433 Msa0568710:CDS
TACCACTATAAGTTTCATAG+GGG 0.744674 4_1:+70317950 None:intergenic
TTACGGATGCATAATCAGGG+TGG 0.757818 4_1:+70320559 None:intergenic
GGAAAGAGTTCAGAGCAACG+GGG 0.791990 4_1:-70319157 Msa0568710:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTGTTATTATACTAT+AGG - chr4_1:70318413-70318432 Msa0568710:intron 10.0%
!! TAAATAATGTTTATGTTTAT+GGG - chr4_1:70319066-70319085 Msa0568710:CDS 10.0%
!!! AATTGTTTAAGATTTGAAAT+GGG - chr4_1:70317002-70317021 Msa0568710:intron 15.0%
!!! TGAAATTCATTTTTTGATTT+TGG - chr4_1:70317057-70317076 Msa0568710:intron 15.0%
!!! GAAATTCATTTTTTGATTTT+GGG - chr4_1:70317058-70317077 Msa0568710:intron 15.0%
!! TATACAAGTTAAGAATTAAA+AGG + chr4_1:70318393-70318412 None:intergenic 15.0%
!!! TTTTTATTTGCTTCTTATAT+AGG - chr4_1:70318662-70318681 Msa0568710:CDS 15.0%
!!! TTTTATTTGCTTCTTATATA+GGG - chr4_1:70318663-70318682 Msa0568710:CDS 15.0%
!! GTAAATAATGTTTATGTTTA+TGG - chr4_1:70319065-70319084 Msa0568710:CDS 15.0%
!! AAATAATGTTTATGTTTATG+GGG - chr4_1:70319067-70319086 Msa0568710:CDS 15.0%
!! AATGTAATTGAATAAACATT+GGG + chr4_1:70320788-70320807 None:intergenic 15.0%
!! AAATGTAATTGAATAAACAT+TGG + chr4_1:70320789-70320808 None:intergenic 15.0%
!!! ATGTTTATTCAATTACATTT+TGG - chr4_1:70320789-70320808 Msa0568710:exon 15.0%
!! AACAACAAAAAATTCATCAT+CGG + chr4_1:70316706-70316725 None:intergenic 20.0%
!!! GTTTTGTTTTTGAATTGTTT+TGG - chr4_1:70316723-70316742 Msa0568710:exon 20.0%
!! CATTTCAAATCTTAAACAAT+TGG + chr4_1:70317003-70317022 None:intergenic 20.0%
!!! CAATTGTTTAAGATTTGAAA+TGG - chr4_1:70317001-70317020 Msa0568710:intron 20.0%
!!! ATTTTGACTATGATTACTTT+GGG - chr4_1:70317133-70317152 Msa0568710:CDS 20.0%
!!! TGTGAATTTTGAATCTTATT+TGG - chr4_1:70317401-70317420 Msa0568710:CDS 20.0%
!! TTGGAATTGAAAATAAATCA+TGG - chr4_1:70317831-70317850 Msa0568710:intron 20.0%
!! ATTGAAAATAAATCATGGAA+AGG - chr4_1:70317836-70317855 Msa0568710:intron 20.0%
!! TAAAATAGACAAATTTCAAC+TGG + chr4_1:70317927-70317946 None:intergenic 20.0%
!! AAACTTGTATGAAGTTAAAA+AGG + chr4_1:70318365-70318384 None:intergenic 20.0%
!! GCAAATAAAAATTCAAAATC+AGG + chr4_1:70318653-70318672 None:intergenic 20.0%
!!! TATTTTGACTTTGAAAAACT+AGG - chr4_1:70318744-70318763 Msa0568710:CDS 20.0%
!! AAAAATAACTATTACACAAG+TGG + chr4_1:70318865-70318884 None:intergenic 20.0%
!!! TATTTTTTGTAACTAATGAC+AGG - chr4_1:70318878-70318897 Msa0568710:CDS 20.0%
!!! ATCGATTATTTTATTAAGGT+TGG + chr4_1:70318922-70318941 None:intergenic 20.0%
!!! TGACATCGATTATTTTATTA+AGG + chr4_1:70318926-70318945 None:intergenic 20.0%
!!! TTGTAGATATTAGAAGTATA+TGG + chr4_1:70319609-70319628 None:intergenic 20.0%
!! AATAAGATTATCTATGACAA+CGG - chr4_1:70319797-70319816 Msa0568710:intron 20.0%
!!! AGTTCTGATAATTATTAAGA+GGG + chr4_1:70319932-70319951 None:intergenic 20.0%
!! TAATAATTATCAGAACTGTT+TGG - chr4_1:70319935-70319954 Msa0568710:CDS 20.0%
!! AATAATTATCAGAACTGTTT+GGG - chr4_1:70319936-70319955 Msa0568710:CDS 20.0%
!! TCAAAGTTTAAATATACACA+TGG - chr4_1:70320020-70320039 Msa0568710:CDS 20.0%
!!! ATTACAACTTAAAAAAGCAT+AGG - chr4_1:70320867-70320886 Msa0568710:five_prime_UTR 20.0%
! TTGAAAATTGAAGTGGAAAT+GGG + chr4_1:70316163-70316182 None:intergenic 25.0%
! GTTGTATTTATAGTAGTGAA+AGG + chr4_1:70316305-70316324 None:intergenic 25.0%
!!! TTGGATTTTATTGATTCAGT+TGG - chr4_1:70316742-70316761 Msa0568710:CDS 25.0%
!!! GTGATTTTTTTTCAGTGTTA+AGG - chr4_1:70316884-70316903 Msa0568710:intron 25.0%
!!! AACCATTTTAATCATAGATC+TGG - chr4_1:70316915-70316934 Msa0568710:intron 25.0%
!!! ACCATTTTAATCATAGATCT+GGG - chr4_1:70316916-70316935 Msa0568710:intron 25.0%
! GATAATTTCATACACATCAT+CGG + chr4_1:70316961-70316980 None:intergenic 25.0%
! TGTGTATGAAATTATCATCA+AGG - chr4_1:70316965-70316984 Msa0568710:CDS 25.0%
!!! AAGATTTGAAATGGGTTTTT+AGG - chr4_1:70317010-70317029 Msa0568710:intron 25.0%
! ATAGTGAGATAATCTATGAT+AGG - chr4_1:70317109-70317128 Msa0568710:intron 25.0%
! TAGTGAGATAATCTATGATA+GGG - chr4_1:70317110-70317129 Msa0568710:intron 25.0%
!!! GATTTTGACTATGATTACTT+TGG - chr4_1:70317132-70317151 Msa0568710:CDS 25.0%
!!! AAACCATTTTGTGATTTGTT+TGG - chr4_1:70317693-70317712 Msa0568710:CDS 25.0%
! ATTCCAAACAAATCACAAAA+TGG + chr4_1:70317699-70317718 None:intergenic 25.0%
!! TTATTTTCTATCAAATCCAC+AGG - chr4_1:70318225-70318244 Msa0568710:CDS 25.0%
!! TATTTTCTATCAAATCCACA+GGG - chr4_1:70318226-70318245 Msa0568710:CDS 25.0%
!!! AAATCCTTACATGCTTTTTA+AGG - chr4_1:70318318-70318337 Msa0568710:intron 25.0%
!!! CTTTTTAACTACAACTGATA+CGG - chr4_1:70318779-70318798 Msa0568710:intron 25.0%
!!! TTTTTAACTACAACTGATAC+GGG - chr4_1:70318780-70318799 Msa0568710:intron 25.0%
! ACATAAACATTATTTACCTC+TGG + chr4_1:70319062-70319081 None:intergenic 25.0%
!! TTTGATAGTTTACTTGGATA+TGG - chr4_1:70319129-70319148 Msa0568710:CDS 25.0%
! TTAAATATACATGTGCAACT+GGG + chr4_1:70319334-70319353 None:intergenic 25.0%
! TTAAAGACAAACAGTTAACA+AGG + chr4_1:70319700-70319719 None:intergenic 25.0%
! ATAATCTTATTCTTAAGTGC+AGG + chr4_1:70319788-70319807 None:intergenic 25.0%
!! CAGTTCTGATAATTATTAAG+AGG + chr4_1:70319933-70319952 None:intergenic 25.0%
! TCTCTTACTAAATCTATTGA+TGG - chr4_1:70320142-70320161 Msa0568710:intron 25.0%
! CTCTTACTAAATCTATTGAT+GGG - chr4_1:70320143-70320162 Msa0568710:intron 25.0%
! TCTTACTAAATCTATTGATG+GGG - chr4_1:70320144-70320163 Msa0568710:intron 25.0%
! AACAAAATAGAGAGTGATAT+TGG + chr4_1:70320178-70320197 None:intergenic 25.0%
!!! ACTCTCTATTTTGTTTTGAA+AGG - chr4_1:70320183-70320202 Msa0568710:intron 25.0%
!!! CTCTCTATTTTGTTTTGAAA+GGG - chr4_1:70320184-70320203 Msa0568710:intron 25.0%
!!! TGTTTTTTTGTTGTGAATGT+AGG - chr4_1:70320358-70320377 Msa0568710:intron 25.0%
!!! ATTTTGAAGATTTCCAAGTA+TGG + chr4_1:70320606-70320625 None:intergenic 25.0%
!!! TTACATTTTGGTACCAAAAT+AGG - chr4_1:70320801-70320820 Msa0568710:five_prime_UTR 25.0%
!! ATTTGATTGTTGATTGGATT+TGG + chr4_1:70320975-70320994 None:intergenic 25.0%
! ATCCAATCAACAATCAAATA+TGG - chr4_1:70320976-70320995 Msa0568710:five_prime_UTR 25.0%
! ATCCATATTTGATTGTTGAT+TGG + chr4_1:70320981-70321000 None:intergenic 25.0%
GTTGAAAATTGAAGTGGAAA+TGG + chr4_1:70316164-70316183 None:intergenic 30.0%
AAACTAGGGTTACGTAATTA+TGG + chr4_1:70316272-70316291 None:intergenic 30.0%
AAGGTGAGATTTGAAAACTA+GGG + chr4_1:70316286-70316305 None:intergenic 30.0%
AAAGGTGAGATTTGAAAACT+AGG + chr4_1:70316287-70316306 None:intergenic 30.0%
AGATTGAAGAAACTCAGTTA+CGG - chr4_1:70316484-70316503 Msa0568710:three_prime_UTR 30.0%
AAATTACGGATGCATAATCA+GGG + chr4_1:70316639-70316658 None:intergenic 30.0%
AAAATTACGGATGCATAATC+AGG + chr4_1:70316640-70316659 None:intergenic 30.0%
TAAAAAAGGCGGGAAAATTA+CGG + chr4_1:70316653-70316672 None:intergenic 30.0%
AAGCAGAGGAAAACTAAAAA+AGG + chr4_1:70316667-70316686 None:intergenic 30.0%
TCCCAGATCTATGATTAAAA+TGG + chr4_1:70316920-70316939 None:intergenic 30.0%
!!! TGAAATGGGTTTTTAGGTTT+TGG - chr4_1:70317016-70317035 Msa0568710:intron 30.0%
!!! TGGGTTTTTGATTTAGAATG+CGG - chr4_1:70317077-70317096 Msa0568710:intron 30.0%
AGATTATCTCACTATCCAAT+CGG + chr4_1:70317104-70317123 None:intergenic 30.0%
! ATGAAAGAGGATAGTATTGA+AGG - chr4_1:70317474-70317493 Msa0568710:CDS 30.0%
! TGAAAGAGGATAGTATTGAA+GGG - chr4_1:70317475-70317494 Msa0568710:intron 30.0%
AGGGATTTATGATACATTGA+AGG - chr4_1:70317494-70317513 Msa0568710:intron 30.0%
AACAAGTGTTCATCTAATTG+AGG + chr4_1:70317723-70317742 None:intergenic 30.0%
! TGCTGATATATTTGAGTTCT+TGG - chr4_1:70317812-70317831 Msa0568710:intron 30.0%
!!! AGATTTATTTTACGCCCTTT+GGG - chr4_1:70317996-70318015 Msa0568710:CDS 30.0%
GTATGAAAAAGCAGTAAGTT+TGG - chr4_1:70318137-70318156 Msa0568710:intron 30.0%
!! CTGGTTGTTTTGTATATTTC+CGG - chr4_1:70318171-70318190 Msa0568710:CDS 30.0%
!! TTGTTTTGTATATTTCCGGA+AGG - chr4_1:70318175-70318194 Msa0568710:CDS 30.0%
TGACAGAAATCAAACAAACT+CGG + chr4_1:70318620-70318639 None:intergenic 30.0%
!! TTTTAACTACAACTGATACG+GGG - chr4_1:70318781-70318800 Msa0568710:intron 30.0%
TACCTTTATACTACTAGGAA+TGG - chr4_1:70319025-70319044 Msa0568710:intron 30.0%
! CTCTGATTTGATAGTTTACT+TGG - chr4_1:70319123-70319142 Msa0568710:CDS 30.0%
TACCACTATAAGTTTCATAG+GGG + chr4_1:70319245-70319264 None:intergenic 30.0%
CTACCACTATAAGTTTCATA+GGG + chr4_1:70319246-70319265 None:intergenic 30.0%
ACTACCACTATAAGTTTCAT+AGG + chr4_1:70319247-70319266 None:intergenic 30.0%
ATTGAAAATACCTTGCTTAC+AGG + chr4_1:70319270-70319289 None:intergenic 30.0%
GTTAAATATACATGTGCAAC+TGG + chr4_1:70319335-70319354 None:intergenic 30.0%
CAACATATAATGACATGGTA+TGG + chr4_1:70319655-70319674 None:intergenic 30.0%
CATACCATGTCATTATATGT+TGG - chr4_1:70319653-70319672 Msa0568710:CDS 30.0%
GATACCAACATATAATGACA+TGG + chr4_1:70319660-70319679 None:intergenic 30.0%
GTTAACTGTTTGTCTTTAAG+TGG - chr4_1:70319701-70319720 Msa0568710:CDS 30.0%
! GCAAAAGATATTGGTTGATA+TGG - chr4_1:70319966-70319985 Msa0568710:CDS 30.0%
GCTTTGTATAGAATTTACTC+TGG - chr4_1:70320644-70320663 Msa0568710:CDS 30.0%
AATCAAATATGGATGTCAAG+AGG - chr4_1:70320987-70321006 Msa0568710:five_prime_UTR 30.0%
!! GGTTCATTTTGACAAGATAA+CGG - chr4_1:70321011-70321030 Msa0568710:five_prime_UTR 30.0%
AGATTGAAGATACTTGGTTA+TGG - chr4_1:70321036-70321055 Msa0568710:five_prime_UTR 30.0%
AAATGGGTATAAGATGGGTA+GGG + chr4_1:70316147-70316166 None:intergenic 35.0%
AGTGGAAATGGGTATAAGAT+GGG + chr4_1:70316152-70316171 None:intergenic 35.0%
AAGTGGAAATGGGTATAAGA+TGG + chr4_1:70316153-70316172 None:intergenic 35.0%
TGGAAGGTTGAAAATTGAAG+TGG + chr4_1:70316170-70316189 None:intergenic 35.0%
! TTCCAATTTTCACATTCTCG+CGG - chr4_1:70316185-70316204 Msa0568710:three_prime_UTR 35.0%
! AAAACCCCAACTCTTTTTAG+AGG - chr4_1:70316224-70316243 Msa0568710:three_prime_UTR 35.0%
! AAACCCCAACTCTTTTTAGA+GGG - chr4_1:70316225-70316244 Msa0568710:three_prime_UTR 35.0%
! AGTTCCCTCTAAAAAGAGTT+GGG + chr4_1:70316232-70316251 None:intergenic 35.0%
! GGAATTTTATCGAACGGTTT+TGG + chr4_1:70316353-70316372 None:intergenic 35.0%
! AGTTGGGGAATTTTATCGAA+CGG + chr4_1:70316359-70316378 None:intergenic 35.0%
GGTTCATTTCGACAAGATAA+CGG - chr4_1:70316459-70316478 Msa0568710:three_prime_UTR 35.0%
!! TAATTCATCAAGTTGACTGG+TGG + chr4_1:70316581-70316600 None:intergenic 35.0%
AGAGGAAAACTAAAAAAGGC+GGG + chr4_1:70316663-70316682 None:intergenic 35.0%
CAGAGGAAAACTAAAAAAGG+CGG + chr4_1:70316664-70316683 None:intergenic 35.0%
AAGATAACGTTATGAAGCAG+AGG + chr4_1:70316681-70316700 None:intergenic 35.0%
GATTATCTCACTATCCAATC+GGG + chr4_1:70317103-70317122 None:intergenic 35.0%
TCTTATCTGTTGAAGGTTCA+AGG - chr4_1:70317174-70317193 Msa0568710:CDS 35.0%
! ACCTCAACACATGATAATGA+GGG - chr4_1:70317212-70317231 Msa0568710:CDS 35.0%
! ATGATAATGAGGGTTTCTGT+TGG - chr4_1:70317222-70317241 Msa0568710:CDS 35.0%
ATCATTTCATGTCTCAGAGA+TGG - chr4_1:70317283-70317302 Msa0568710:intron 35.0%
GCTGTTATTAGTAAATCTGC+AGG - chr4_1:70317522-70317541 Msa0568710:intron 35.0%
GTTATTAGTAAATCTGCAGG+AGG - chr4_1:70317525-70317544 Msa0568710:intron 35.0%
GAGTGTTATGTGATTGTTGT+AGG - chr4_1:70317759-70317778 Msa0568710:intron 35.0%
TCAAATATATCAGCATGCCA+TGG + chr4_1:70317807-70317826 None:intergenic 35.0%
! AATCATGGAAAGGTATGAAG+TGG - chr4_1:70317846-70317865 Msa0568710:intron 35.0%
CTGGCATATACTAAGATCTA+GGG + chr4_1:70317908-70317927 None:intergenic 35.0%
ACTGGCATATACTAAGATCT+AGG + chr4_1:70317909-70317928 None:intergenic 35.0%
!!! GAGATTTATTTTACGCCCTT+TGG - chr4_1:70317995-70318014 Msa0568710:CDS 35.0%
ACTCTTTCCATAAAGAGATC+AGG + chr4_1:70318024-70318043 None:intergenic 35.0%
CGGAAATATACAAAACAACC+AGG + chr4_1:70318173-70318192 None:intergenic 35.0%
!!! ATCTTTTTTGCTTTTCCCTG+TGG + chr4_1:70318244-70318263 None:intergenic 35.0%
TTGAAGTCACAGATAGAAAC+TGG - chr4_1:70318295-70318314 Msa0568710:CDS 35.0%
!! TCCTTACATGCTTTTTAAGG+TGG - chr4_1:70318321-70318340 Msa0568710:intron 35.0%
! ACCACCTTAAAAAGCATGTA+AGG + chr4_1:70318325-70318344 None:intergenic 35.0%
TACTATAGGATGCTTGCAAT+AGG - chr4_1:70318427-70318446 Msa0568710:intron 35.0%
ACCTTATCTCTTACATAACG+CGG + chr4_1:70318567-70318586 None:intergenic 35.0%
GACAGAAATCAAACAAACTC+GGG + chr4_1:70318619-70318638 None:intergenic 35.0%
TCTTATATAGGGTTTACCTG+TGG - chr4_1:70318674-70318693 Msa0568710:CDS 35.0%
! TGACTTTGAAAAACTAGGAG+AGG - chr4_1:70318749-70318768 Msa0568710:CDS 35.0%
! GGTCATATAGTGATAGTGTA+AGG + chr4_1:70318844-70318863 None:intergenic 35.0%
GCTGATACCTTTATACTACT+AGG - chr4_1:70319020-70319039 Msa0568710:intron 35.0%
TGCCATTCCTAGTAGTATAA+AGG + chr4_1:70319030-70319049 None:intergenic 35.0%
TGTGAATTAGCTGCAAAAGA+AGG - chr4_1:70319219-70319238 Msa0568710:intron 35.0%
!! AGCAAGGTATTTTCAATCAG+TGG - chr4_1:70319273-70319292 Msa0568710:intron 35.0%
CTTTCCTTACCCTTCTATTA+TGG - chr4_1:70319301-70319320 Msa0568710:intron 35.0%
CTAAAGATCCAAGATGTTTG+TGG - chr4_1:70319390-70319409 Msa0568710:CDS 35.0%
AGGTGATTATCTATATGTGC+AGG - chr4_1:70319419-70319438 Msa0568710:CDS 35.0%
GGTGATTATCTATATGTGCA+GGG - chr4_1:70319420-70319439 Msa0568710:CDS 35.0%
GTTATTGCCAAGAATTTGAC+TGG + chr4_1:70319574-70319593 None:intergenic 35.0%
TCTTCACGATTTGACTGAAA+TGG - chr4_1:70319751-70319770 Msa0568710:intron 35.0%
CTTCACGATTTGACTGAAAT+GGG - chr4_1:70319752-70319771 Msa0568710:intron 35.0%
TATATGACTTTCAGTTCAGC+AGG + chr4_1:70319848-70319867 None:intergenic 35.0%
AATTTCTACCTGACACAAAC+TGG - chr4_1:70319885-70319904 Msa0568710:CDS 35.0%
GGAGATCAAGCAAAAGATAT+TGG - chr4_1:70319957-70319976 Msa0568710:CDS 35.0%
GAAGTAAGCTTTCCAAAGTT+GGG + chr4_1:70320051-70320070 None:intergenic 35.0%
! CTTCCTTGCATTTTTATGCT+TGG - chr4_1:70320067-70320086 Msa0568710:CDS 35.0%
TGACCAAGCATAAAAATGCA+AGG + chr4_1:70320073-70320092 None:intergenic 35.0%
! GCATTTTTATGCTTGGTCAA+AGG - chr4_1:70320074-70320093 Msa0568710:CDS 35.0%
!! TTTTGAAAGGGTTTGAAGAC+TGG - chr4_1:70320196-70320215 Msa0568710:intron 35.0%
TTTGAAAGGGTTTGAAGACT+GGG - chr4_1:70320197-70320216 Msa0568710:intron 35.0%
TGCAATTACTTTAATGCCAG+AGG + chr4_1:70320278-70320297 None:intergenic 35.0%
TTCAAATGCCAATCCATACT+TGG - chr4_1:70320590-70320609 Msa0568710:CDS 35.0%
GAAGATTTCCAAGTATGGAT+TGG + chr4_1:70320601-70320620 None:intergenic 35.0%
! TTGTTGTATTGCGTGCTTTT+AGG - chr4_1:70320703-70320722 Msa0568710:CDS 35.0%
! AATTTTGTCATCCTAAGCAG+AGG + chr4_1:70320830-70320849 None:intergenic 35.0%
GAAGTTAATTTCCCACGTTA+AGG + chr4_1:70320897-70320916 None:intergenic 35.0%
GAAATGGGTATAAGATGGGT+AGG + chr4_1:70316148-70316167 None:intergenic 40.0%
GCGAGAATGTGAAAATTGGA+AGG + chr4_1:70316186-70316205 None:intergenic 40.0%
! TCCAATTTTCACATTCTCGC+GGG - chr4_1:70316186-70316205 Msa0568710:three_prime_UTR 40.0%
! GTTCCCTCTAAAAAGAGTTG+GGG + chr4_1:70316231-70316250 None:intergenic 40.0%
! GAGTTCCCTCTAAAAAGAGT+TGG + chr4_1:70316233-70316252 None:intergenic 40.0%
!! TGGATTGGATTTGGTTCTGA+CGG + chr4_1:70316392-70316411 None:intergenic 40.0%
!! GTTCGATTGTGGATTGGATT+TGG + chr4_1:70316401-70316420 None:intergenic 40.0%
CATCTTGTTCGATTGTGGAT+TGG + chr4_1:70316407-70316426 None:intergenic 40.0%
ACGTACATCTTGTTCGATTG+TGG + chr4_1:70316412-70316431 None:intergenic 40.0%
ATGTACGTTGTGAAGAGAGA+TGG - chr4_1:70316424-70316443 Msa0568710:three_prime_UTR 40.0%
CTTTCTGAGCGACTAAAACA+GGG + chr4_1:70316531-70316550 None:intergenic 40.0%
ACTTTCTGAGCGACTAAAAC+AGG + chr4_1:70316532-70316551 None:intergenic 40.0%
!! GGCTAATTCATCAAGTTGAC+TGG + chr4_1:70316584-70316603 None:intergenic 40.0%
!! TATTGATTCAGTTGGCTGCT+AGG - chr4_1:70316750-70316769 Msa0568710:CDS 40.0%
!!! ATCCTTTTCTGAAACGTGAG+TGG - chr4_1:70316808-70316827 Msa0568710:CDS 40.0%
!!! TCCTTTTCTGAAACGTGAGT+GGG - chr4_1:70316809-70316828 Msa0568710:CDS 40.0%
TACACATCATCGGCAATCAA+CGG + chr4_1:70316951-70316970 None:intergenic 40.0%
CAACAGATAAGACCTCTCTA+GGG + chr4_1:70317166-70317185 None:intergenic 40.0%
TCAACAGATAAGACCTCTCT+AGG + chr4_1:70317167-70317186 None:intergenic 40.0%
! AGAGAGGTCTTATCTGTTGA+AGG - chr4_1:70317167-70317186 Msa0568710:CDS 40.0%
! GACCTCAACACATGATAATG+AGG - chr4_1:70317211-70317230 Msa0568710:CDS 40.0%
ACCCTCATTATCATGTGTTG+AGG + chr4_1:70317216-70317235 None:intergenic 40.0%
GGTTTCTGTTGGAATTCACA+AGG - chr4_1:70317233-70317252 Msa0568710:CDS 40.0%
! AGGTGTTCCAGCATTGAAAA+GGG + chr4_1:70317328-70317347 None:intergenic 40.0%
! TAGGTGTTCCAGCATTGAAA+AGG + chr4_1:70317329-70317348 None:intergenic 40.0%
! TTTTCAATGCTGGAACACCT+AGG - chr4_1:70317328-70317347 Msa0568710:intron 40.0%
! CTTCTTGGTGTGTATGAAAG+AGG - chr4_1:70317461-70317480 Msa0568710:CDS 40.0%
AGTAAATCTGCAGGAGGAAT+TGG - chr4_1:70317531-70317550 Msa0568710:intron 40.0%
AGTTACATTCGGGGAACAAA+TGG - chr4_1:70317585-70317604 Msa0568710:CDS 40.0%
GGAACAAATGGAACGTCTAA+TGG - chr4_1:70317597-70317616 Msa0568710:CDS 40.0%
CCTACATAGGTAACACATCA+AGG + chr4_1:70317960-70317979 None:intergenic 40.0%
CCTTGATGTGTTACCTATGT+AGG - chr4_1:70317957-70317976 Msa0568710:CDS 40.0%
ATGGAAAGAGTTCAGAGCAA+CGG - chr4_1:70318033-70318052 Msa0568710:CDS 40.0%
!! AAGTTTGGTCTTGATAAGCC+TGG - chr4_1:70318152-70318171 Msa0568710:CDS 40.0%
CAGTAAAAGAGACATCCTTC+CGG + chr4_1:70318193-70318212 None:intergenic 40.0%
AAAAGCAACCAGCAGAATCT+GGG - chr4_1:70318450-70318469 Msa0568710:CDS 40.0%
TTACACACAGCAGTTTCTGT+TGG + chr4_1:70318525-70318544 None:intergenic 40.0%
ATCTCTTACATAACGCGGTA+GGG + chr4_1:70318562-70318581 None:intergenic 40.0%
TATCTCTTACATAACGCGGT+AGG + chr4_1:70318563-70318582 None:intergenic 40.0%
ACCGCGTTATGTAAGAGATA+AGG - chr4_1:70318563-70318582 Msa0568710:intron 40.0%
CCTAACACAAAAAATGCCAG+AGG + chr4_1:70318596-70318615 None:intergenic 40.0%
!!! CCTCTGGCATTTTTTGTGTT+AGG - chr4_1:70318593-70318612 Msa0568710:intron 40.0%
TCTCATCAGTCTAAGCTTGT+TGG - chr4_1:70318699-70318718 Msa0568710:CDS 40.0%
! CTCATCAGTCTAAGCTTGTT+GGG - chr4_1:70318700-70318719 Msa0568710:CDS 40.0%
ACCTTTCTGCAGTTTCAACT+GGG + chr4_1:70318956-70318975 None:intergenic 40.0%
AATGGCATTTGATTCACCAG+AGG - chr4_1:70319043-70319062 Msa0568710:intron 40.0%
TTTACTTGGATATGGTGTGC+AGG - chr4_1:70319137-70319156 Msa0568710:CDS 40.0%
! CACAAGAAGTTTTCAGAGCA+TGG + chr4_1:70319203-70319222 None:intergenic 40.0%
TCCTTACCCTTCTATTATGG+TGG - chr4_1:70319304-70319323 Msa0568710:intron 40.0%
ACCACCATAATAGAAGGGTA+AGG + chr4_1:70319308-70319327 None:intergenic 40.0%
GGACTACCACCATAATAGAA+GGG + chr4_1:70319313-70319332 None:intergenic 40.0%
CTAAGCAACCACAAACATCT+TGG + chr4_1:70319401-70319420 None:intergenic 40.0%
CAAGATGTTTGTGGTTGCTT+AGG - chr4_1:70319399-70319418 Msa0568710:CDS 40.0%
AATTCTTCAGCCTGACATGT+GGG - chr4_1:70319443-70319462 Msa0568710:CDS 40.0%
ATTTGACTGGTAGATGCAGT+TGG + chr4_1:70319561-70319580 None:intergenic 40.0%
GCATCTACCAGTCAAATTCT+TGG - chr4_1:70319564-70319583 Msa0568710:CDS 40.0%
ATTTGACTGAAATGGGACTG+TGG - chr4_1:70319759-70319778 Msa0568710:intron 40.0%
ATTAGAGTCCAGTTTGTGTC+AGG + chr4_1:70319896-70319915 None:intergenic 40.0%
CACATGGATAAACCCAACTT+TGG - chr4_1:70320036-70320055 Msa0568710:CDS 40.0%
GGAAGTAAGCTTTCCAAAGT+TGG + chr4_1:70320052-70320071 None:intergenic 40.0%
GGTATCAACAGTGAACTTGA+TGG + chr4_1:70320257-70320276 None:intergenic 40.0%
AAGTTCACTGTTGATACCTC+TGG - chr4_1:70320259-70320278 Msa0568710:CDS 40.0%
GTGAATGTAGGATCAACCTA+AGG - chr4_1:70320370-70320389 Msa0568710:intron 40.0%
TGAGGATGATGATACCAAGA+TGG - chr4_1:70320409-70320428 Msa0568710:CDS 40.0%
CAACAGGTGCAAATCTACTA+AGG + chr4_1:70320498-70320517 None:intergenic 40.0%
CTTAGTAGATTTGCACCTGT+TGG - chr4_1:70320496-70320515 Msa0568710:intron 40.0%
! TAAGCAGAGGAGACCTATTT+TGG + chr4_1:70320817-70320836 None:intergenic 40.0%
AAAATAGGTCTCCTCTGCTT+AGG - chr4_1:70320816-70320835 Msa0568710:five_prime_UTR 40.0%
CAAATATGGATGTCAAGAGG+CGG - chr4_1:70320990-70321009 Msa0568710:five_prime_UTR 40.0%
ACGGCAAGATTGAAGATACT+TGG - chr4_1:70321030-70321049 Msa0568710:five_prime_UTR 40.0%
TCCCGCGAGAATGTGAAAAT+TGG + chr4_1:70316190-70316209 None:intergenic 45.0%
! TGACGGCGATGGATTTAGTT+GGG + chr4_1:70316375-70316394 None:intergenic 45.0%
TGCATAATCAGGGTGGTTAG+CGG + chr4_1:70316629-70316648 None:intergenic 45.0%
TTACGGATGCATAATCAGGG+TGG + chr4_1:70316636-70316655 None:intergenic 45.0%
ACCCACTCACGTTTCAGAAA+AGG + chr4_1:70316813-70316832 None:intergenic 45.0%
TTGGGTTCAAAACCCTAGAG+AGG - chr4_1:70317151-70317170 Msa0568710:CDS 45.0%
TCTGTTGAAGGTTCAAGGAG+TGG - chr4_1:70317179-70317198 Msa0568710:CDS 45.0%
! GAAAAGGGTTGGAGAAGCAT+GGG + chr4_1:70317313-70317332 None:intergenic 45.0%
TGAAAAGGGTTGGAGAAGCA+TGG + chr4_1:70317314-70317333 None:intergenic 45.0%
! TCTCCAACCCTTTTCAATGC+TGG - chr4_1:70317318-70317337 Msa0568710:intron 45.0%
! GTTCCAGCATTGAAAAGGGT+TGG + chr4_1:70317324-70317343 None:intergenic 45.0%
GCACATGAATAACGTACCTG+AGG + chr4_1:70317354-70317373 None:intergenic 45.0%
GCAGTTGAGTAGTTGCTTCT+TGG - chr4_1:70317446-70317465 Msa0568710:CDS 45.0%
GTGCCCATGGTAGTTACATT+CGG - chr4_1:70317574-70317593 Msa0568710:CDS 45.0%
TGCCCATGGTAGTTACATTC+GGG - chr4_1:70317575-70317594 Msa0568710:CDS 45.0%
TCCCCGAATGTAACTACCAT+GGG + chr4_1:70317580-70317599 None:intergenic 45.0%
TTCCCCGAATGTAACTACCA+TGG + chr4_1:70317581-70317600 None:intergenic 45.0%
TCATTGAACACACGCAGCAT+CGG + chr4_1:70317630-70317649 None:intergenic 45.0%
TACTGCCCGTTATGTTGATC+AGG - chr4_1:70317650-70317669 Msa0568710:CDS 45.0%
ACTGCCCGTTATGTTGATCA+GGG - chr4_1:70317651-70317670 Msa0568710:CDS 45.0%
TCCTCCCTGATCAACATAAC+GGG + chr4_1:70317658-70317677 None:intergenic 45.0%
CTCCTCCCTGATCAACATAA+CGG + chr4_1:70317659-70317678 None:intergenic 45.0%
GCACGTTGTTCTTCCTACAT+AGG + chr4_1:70317973-70317992 None:intergenic 45.0%
AAAGAGATCAGGCACCCAAA+GGG + chr4_1:70318013-70318032 None:intergenic 45.0%
TAAAGAGATCAGGCACCCAA+AGG + chr4_1:70318014-70318033 None:intergenic 45.0%
TTGGGTGCCTGATCTCTTTA+TGG - chr4_1:70318014-70318033 Msa0568710:CDS 45.0%
TGGAAAGAGTTCAGAGCAAC+GGG - chr4_1:70318034-70318053 Msa0568710:CDS 45.0%
!! ACCTGGTTTGGCAGATTGTT+GGG - chr4_1:70318086-70318105 Msa0568710:intron 45.0%
TTGTTCAAGCACAGAGTCTG+TGG - chr4_1:70318263-70318282 Msa0568710:CDS 45.0%
GAAAAGCAACCAGCAGAATC+TGG - chr4_1:70318449-70318468 Msa0568710:CDS 45.0%
TAATTGTGCCCAGATTCTGC+TGG + chr4_1:70318461-70318480 None:intergenic 45.0%
GAGATAAGGTATGACACCTC+TGG - chr4_1:70318577-70318596 Msa0568710:intron 45.0%
TTAGACTGATGAGACTCCAC+AGG + chr4_1:70318693-70318712 None:intergenic 45.0%
CTAATGACAGGTTACTGCTG+TGG - chr4_1:70318890-70318909 Msa0568710:CDS 45.0%
ACCCAGTTGAAACTGCAGAA+AGG - chr4_1:70318952-70318971 Msa0568710:intron 45.0%
GACCTTTCTGCAGTTTCAAC+TGG + chr4_1:70318957-70318976 None:intergenic 45.0%
CTGCAGAAAGGTCAAACTTG+CGG - chr4_1:70318964-70318983 Msa0568710:intron 45.0%
! ACCCATTGGTATTGGAGTTC+AGG - chr4_1:70318992-70319011 Msa0568710:intron 45.0%
CCCTGAACTCCAATACCAAT+GGG + chr4_1:70318996-70319015 None:intergenic 45.0%
! CCCATTGGTATTGGAGTTCA+GGG - chr4_1:70318993-70319012 Msa0568710:intron 45.0%
ACCCTGAACTCCAATACCAA+TGG + chr4_1:70318997-70319016 None:intergenic 45.0%
GCAGGCTCAACAGTTAAACA+AGG - chr4_1:70319155-70319174 Msa0568710:CDS 45.0%
GGCCCCTATGAAACTTATAG+TGG - chr4_1:70319240-70319259 Msa0568710:intron 45.0%
TAGTGGTAGTCCTGTAAGCA+AGG - chr4_1:70319257-70319276 Msa0568710:intron 45.0%
GGGACTACCACCATAATAGA+AGG + chr4_1:70319314-70319333 None:intergenic 45.0%
GAATTCTTCAGCCTGACATG+TGG - chr4_1:70319442-70319461 Msa0568710:CDS 45.0%
ATTCTTCAGCCTGACATGTG+GGG - chr4_1:70319444-70319463 Msa0568710:CDS 45.0%
TGTGACTCCCTCCAATTTGT+GGG - chr4_1:70319467-70319486 Msa0568710:CDS 45.0%
TCCCTCCAATTTGTGGGATT+GGG - chr4_1:70319473-70319492 Msa0568710:CDS 45.0%
CGGGAGATGATATCAAAGAC+AGG - chr4_1:70319504-70319523 Msa0568710:CDS 45.0%
TGGTAGATGCAGTTGGCATA+GGG + chr4_1:70319554-70319573 None:intergenic 45.0%
! TCTACAATCGCAGAGTGCTA+AGG - chr4_1:70319622-70319641 Msa0568710:CDS 45.0%
GTTGATATGGCTGTTGATCG+AGG - chr4_1:70319979-70319998 Msa0568710:CDS 45.0%
GTAGGATCAACCTAAGGTGA+AGG - chr4_1:70320376-70320395 Msa0568710:intron 45.0%
TCATCTGACTCCTTCACCTT+AGG + chr4_1:70320389-70320408 None:intergenic 45.0%
TGATACCAAGATGGCACAGA+TGG - chr4_1:70320418-70320437 Msa0568710:CDS 45.0%
GGTGTAGTTTCAACTTCCAC+AGG + chr4_1:70320477-70320496 None:intergenic 45.0%
ATTTGCACCTGTTGGCATGA+AGG - chr4_1:70320504-70320523 Msa0568710:intron 45.0%
AGCATAGGCAAACCTTAACG+TGG - chr4_1:70320882-70320901 Msa0568710:five_prime_UTR 45.0%
GCATAGGCAAACCTTAACGT+GGG - chr4_1:70320883-70320902 Msa0568710:five_prime_UTR 45.0%
TAAGATGGGTAGGGTAGGTG+AGG + chr4_1:70316138-70316157 None:intergenic 50.0%
GGGTATAAGATGGGTAGGGT+AGG + chr4_1:70316143-70316162 None:intergenic 50.0%
!! ACGGTTTTGGCGCAAGAGTT+AGG + chr4_1:70316340-70316359 None:intergenic 50.0%
! GACGGCGATGGATTTAGTTG+GGG + chr4_1:70316374-70316393 None:intergenic 50.0%
! CTGACGGCGATGGATTTAGT+TGG + chr4_1:70316376-70316395 None:intergenic 50.0%
GAAGAGAGATGGTCGTCAAG+AGG - chr4_1:70316435-70316454 Msa0568710:three_prime_UTR 50.0%
GTCGCTCAGAAAGTTTGTGC+CGG - chr4_1:70316538-70316557 Msa0568710:three_prime_UTR 50.0%
! GTTTGTGCCGGCGTTTACAA+AGG - chr4_1:70316550-70316569 Msa0568710:three_prime_UTR 50.0%
GGTAACGCCTTTGTAAACGC+CGG + chr4_1:70316560-70316579 None:intergenic 50.0%
! GATTTAGAATGCGGCCCGAT+TGG - chr4_1:70317086-70317105 Msa0568710:intron 50.0%
GAAGGTTCAAGGAGTGGTTG+TGG - chr4_1:70317185-70317204 Msa0568710:CDS 50.0%
GAATAACGTACCTGAGGCCT+AGG + chr4_1:70317348-70317367 None:intergenic 50.0%
GTTCACAACATACGTGCCCA+TGG - chr4_1:70317561-70317580 Msa0568710:intron 50.0%
GCCCATGGTAGTTACATTCG+GGG - chr4_1:70317576-70317595 Msa0568710:CDS 50.0%
CGTTATGTTGATCAGGGAGG+AGG - chr4_1:70317657-70317676 Msa0568710:CDS 50.0%
! AGGAGCTTTTGCCGTGTACT+TGG - chr4_1:70317779-70317798 Msa0568710:intron 50.0%
ATGCCATGGCTCCAAGTACA+CGG + chr4_1:70317793-70317812 None:intergenic 50.0%
GGAAAGAGTTCAGAGCAACG+GGG - chr4_1:70318035-70318054 Msa0568710:CDS 50.0%
TGCTTCATTGGGGCAGAACA+GGG + chr4_1:70318067-70318086 None:intergenic 50.0%
CCAAACCAGGTGCTTCATTG+GGG + chr4_1:70318077-70318096 None:intergenic 50.0%
GCCAAACCAGGTGCTTCATT+GGG + chr4_1:70318078-70318097 None:intergenic 50.0%
TGCCAAACCAGGTGCTTCAT+TGG + chr4_1:70318079-70318098 None:intergenic 50.0%
!! CACCTGGTTTGGCAGATTGT+TGG - chr4_1:70318085-70318104 Msa0568710:intron 50.0%
!! CCTGGTTTGGCAGATTGTTG+GGG - chr4_1:70318087-70318106 Msa0568710:intron 50.0%
!! TCTAAGCTTGTTGGGAGCAG+AGG - chr4_1:70318708-70318727 Msa0568710:CDS 50.0%
GTGTGACTCCCTCCAATTTG+TGG - chr4_1:70319466-70319485 Msa0568710:CDS 50.0%
CTCCCTCCAATTTGTGGGAT+TGG - chr4_1:70319472-70319491 Msa0568710:CDS 50.0%
CCCCAATCCCACAAATTGGA+GGG + chr4_1:70319477-70319496 None:intergenic 50.0%
CCCTCCAATTTGTGGGATTG+GGG - chr4_1:70319474-70319493 Msa0568710:CDS 50.0%
ACCCCAATCCCACAAATTGG+AGG + chr4_1:70319478-70319497 None:intergenic 50.0%
TGCACCCCAATCCCACAAAT+TGG + chr4_1:70319481-70319500 None:intergenic 50.0%
GGTAGATGCAGTTGGCATAG+GGG + chr4_1:70319553-70319572 None:intergenic 50.0%
CTGGTAGATGCAGTTGGCAT+AGG + chr4_1:70319555-70319574 None:intergenic 50.0%
TGATGGCATCACTTGCAGCT+CGG + chr4_1:70320240-70320259 None:intergenic 50.0%
GGTGAAGGAGTCAGATGATG+AGG - chr4_1:70320391-70320410 Msa0568710:intron 50.0%
GACAAACAGAGACGAGTGTG+AGG - chr4_1:70320451-70320470 Msa0568710:intron 50.0%
!! GGATTTGGTTCTGACGGCGA+TGG + chr4_1:70316386-70316405 None:intergenic 55.0%
GAGAGATGGTCGTCAAGAGG+CGG - chr4_1:70316438-70316457 Msa0568710:three_prime_UTR 55.0%
TTAGCCGCTGAAACTGCTGC+CGG - chr4_1:70316598-70316617 Msa0568710:three_prime_UTR 55.0%
GCCCGTTATGTTGATCAGGG+AGG - chr4_1:70317654-70317673 Msa0568710:CDS 55.0%
TTGATCAGGGAGGAGGCAAG+AGG - chr4_1:70317664-70317683 Msa0568710:CDS 55.0%
TTGCCGTGTACTTGGAGCCA+TGG - chr4_1:70317787-70317806 Msa0568710:intron 55.0%
GAGTTCAGAGCAACGGGGAA+TGG - chr4_1:70318040-70318059 Msa0568710:intron 55.0%
GTGCTTCATTGGGGCAGAAC+AGG + chr4_1:70318068-70318087 None:intergenic 55.0%
! TTCTGCCCCAATGAAGCACC+TGG - chr4_1:70318069-70318088 Msa0568710:intron 55.0%
! CCCCAATGAAGCACCTGGTT+TGG - chr4_1:70318074-70318093 Msa0568710:intron 55.0%
CCCCAACAATCTGCCAAACC+AGG + chr4_1:70318090-70318109 None:intergenic 55.0%
GCGGTAGGGCAATTGATGCA+AGG + chr4_1:70318548-70318567 None:intergenic 55.0%
! GGAGCAGAGGCTCTAGTAGT+CGG - chr4_1:70318721-70318740 Msa0568710:CDS 55.0%
AACTTGCGGCACAGACCCAT+TGG - chr4_1:70318978-70318997 Msa0568710:intron 55.0%
CGGCACAGACCCATTGGTAT+TGG - chr4_1:70318984-70319003 Msa0568710:intron 55.0%
TGTGGGATTGGGGTGCACTT+CGG - chr4_1:70319484-70319503 Msa0568710:CDS 55.0%
CATCACTTGCAGCTCGGGTT+CGG + chr4_1:70320234-70320253 None:intergenic 55.0%
GATGGCATCACTTGCAGCTC+GGG + chr4_1:70320239-70320258 None:intergenic 55.0%
GCACACCATCTGTGCCATCT+TGG + chr4_1:70320426-70320445 None:intergenic 55.0%
TGCACCTGTTGGCATGAAGG+AGG - chr4_1:70320507-70320526 Msa0568710:intron 55.0%
CATGCCTCCTTCATGCCAAC+AGG + chr4_1:70320514-70320533 None:intergenic 55.0%
CATGCCGGCAGCAGTTTCAG+CGG + chr4_1:70316605-70316624 None:intergenic 60.0%
AGGGTGGTTAGCGGTCATGC+CGG + chr4_1:70316620-70316639 None:intergenic 60.0%
TGCTGGAACACCTAGGCCTC+AGG - chr4_1:70317335-70317354 Msa0568710:intron 60.0%
CAGGGAGGAGGCAAGAGGAA+AGG - chr4_1:70317669-70317688 Msa0568710:CDS 60.0%
GGAGTCACACCCCACATGTC+AGG + chr4_1:70319456-70319475 None:intergenic 60.0%
GTGGGATTGGGGTGCACTTC+GGG - chr4_1:70319485-70319504 Msa0568710:CDS 60.0%
AGAGACGAGTGTGAGGCCTG+TGG - chr4_1:70320458-70320477 Msa0568710:intron 60.0%
CACTTGCAGCTCGGGTTCGG+AGG + chr4_1:70320231-70320250 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 70316130 70321084 70316130 ID=Msa0568710;Name=Msa0568710
chr4_1 mRNA 70316130 70321084 70316130 ID=Msa0568710-mRNA-1;Parent=Msa0568710;Name=Msa0568710-mRNA-1;_AED=0.16;_eAED=0.16;_QI=294|1|0.93|1|1|1|16|597|842
chr4_1 exon 70316130 70316834 70316130 ID=Msa0568710-mRNA-1:exon:23748;Parent=Msa0568710-mRNA-1
chr4_1 exon 70316926 70317009 70316926 ID=Msa0568710-mRNA-1:exon:23747;Parent=Msa0568710-mRNA-1
chr4_1 exon 70317119 70317266 70317119 ID=Msa0568710-mRNA-1:exon:23746;Parent=Msa0568710-mRNA-1
chr4_1 exon 70317344 70317493 70317344 ID=Msa0568710-mRNA-1:exon:23745;Parent=Msa0568710-mRNA-1
chr4_1 exon 70317571 70317773 70317571 ID=Msa0568710-mRNA-1:exon:23744;Parent=Msa0568710-mRNA-1
chr4_1 exon 70317936 70318055 70317936 ID=Msa0568710-mRNA-1:exon:23743;Parent=Msa0568710-mRNA-1
chr4_1 exon 70318150 70318314 70318150 ID=Msa0568710-mRNA-1:exon:23742;Parent=Msa0568710-mRNA-1
chr4_1 exon 70318444 70318530 70318444 ID=Msa0568710-mRNA-1:exon:23741;Parent=Msa0568710-mRNA-1
chr4_1 exon 70318630 70318779 70318630 ID=Msa0568710-mRNA-1:exon:23740;Parent=Msa0568710-mRNA-1
chr4_1 exon 70318875 70318967 70318875 ID=Msa0568710-mRNA-1:exon:23739;Parent=Msa0568710-mRNA-1
chr4_1 exon 70319065 70319235 70319065 ID=Msa0568710-mRNA-1:exon:23738;Parent=Msa0568710-mRNA-1
chr4_1 exon 70319357 70319764 70319357 ID=Msa0568710-mRNA-1:exon:23737;Parent=Msa0568710-mRNA-1
chr4_1 exon 70319858 70320121 70319858 ID=Msa0568710-mRNA-1:exon:23736;Parent=Msa0568710-mRNA-1
chr4_1 exon 70320228 70320315 70320228 ID=Msa0568710-mRNA-1:exon:23735;Parent=Msa0568710-mRNA-1
chr4_1 exon 70320392 70320453 70320392 ID=Msa0568710-mRNA-1:exon:23734;Parent=Msa0568710-mRNA-1
chr4_1 exon 70320563 70321084 70320563 ID=Msa0568710-mRNA-1:exon:23733;Parent=Msa0568710-mRNA-1
chr4_1 five_prime_UTR 70320791 70321084 70320791 ID=Msa0568710-mRNA-1:five_prime_utr;Parent=Msa0568710-mRNA-1
chr4_1 CDS 70320563 70320790 70320563 ID=Msa0568710-mRNA-1:cds;Parent=Msa0568710-mRNA-1
chr4_1 CDS 70320392 70320453 70320392 ID=Msa0568710-mRNA-1:cds;Parent=Msa0568710-mRNA-1
chr4_1 CDS 70320228 70320315 70320228 ID=Msa0568710-mRNA-1:cds;Parent=Msa0568710-mRNA-1
chr4_1 CDS 70319858 70320121 70319858 ID=Msa0568710-mRNA-1:cds;Parent=Msa0568710-mRNA-1
chr4_1 CDS 70319357 70319764 70319357 ID=Msa0568710-mRNA-1:cds;Parent=Msa0568710-mRNA-1
chr4_1 CDS 70319065 70319235 70319065 ID=Msa0568710-mRNA-1:cds;Parent=Msa0568710-mRNA-1
chr4_1 CDS 70318875 70318967 70318875 ID=Msa0568710-mRNA-1:cds;Parent=Msa0568710-mRNA-1
chr4_1 CDS 70318630 70318779 70318630 ID=Msa0568710-mRNA-1:cds;Parent=Msa0568710-mRNA-1
chr4_1 CDS 70318444 70318530 70318444 ID=Msa0568710-mRNA-1:cds;Parent=Msa0568710-mRNA-1
chr4_1 CDS 70318150 70318314 70318150 ID=Msa0568710-mRNA-1:cds;Parent=Msa0568710-mRNA-1
chr4_1 CDS 70317936 70318055 70317936 ID=Msa0568710-mRNA-1:cds;Parent=Msa0568710-mRNA-1
chr4_1 CDS 70317571 70317773 70317571 ID=Msa0568710-mRNA-1:cds;Parent=Msa0568710-mRNA-1
chr4_1 CDS 70317344 70317493 70317344 ID=Msa0568710-mRNA-1:cds;Parent=Msa0568710-mRNA-1
chr4_1 CDS 70317119 70317266 70317119 ID=Msa0568710-mRNA-1:cds;Parent=Msa0568710-mRNA-1
chr4_1 CDS 70316926 70317009 70316926 ID=Msa0568710-mRNA-1:cds;Parent=Msa0568710-mRNA-1
chr4_1 CDS 70316727 70316834 70316727 ID=Msa0568710-mRNA-1:cds;Parent=Msa0568710-mRNA-1
chr4_1 three_prime_UTR 70316130 70316726 70316130 ID=Msa0568710-mRNA-1:three_prime_utr;Parent=Msa0568710-mRNA-1
Gene Sequence

>Msa0568710

ATGTACGTTGTGAAGAGAGATGGTCGTCAAGAGGCGGTTCATTTCGACAAGATAACGGCGAGATTGAAGAAACTCAGTTACGGTTTAAGCACTGAACACTGTGACCCTGTTTTAGTCGCTCAGAAAGTTTGTGCCGGCGTTTACAAAGGCGTTACCACCAGTCAACTTGATGAATTAGCCGCTGAAACTGCTGCCGGCATGACCGCTAACCACCCTGATTATGCATCCTTGGCTGCTAGGATTGCTGTTTCAAATCTGCACAAGAACACACTGAAATCCTTTTCTGAAACTGTTAAGGTTATGTACAACCATTTTAATCATAGATCTGGGAAGAAAGCTCCGTTGATTGCCGATGATGTGTATGAAATTATCATCAAGAATGCGGCCCGATTGGATAGTGAGATAATCTATGATAGGGATTTTGACTATGATTACTTTGGGTTCAAAACCCTAGAGAGGTCTTATCTGTTGAAGGTTCAAGGAGTGGTTGTGGAAAGACCTCAACACATGATAATGAGGGTTTCTGTTGGAATTCACAAGGATGATGTTGAATCTGCTGTCAAAACTTATCATTTCATGTCTCAGAGATGGTTTACCCATGCTTCTCCAACCCTTTTCAATGCTGGAACACCTAGGCCTCAGTTGAGTAGTTGCTTCTTGGTGTGTATGAAAGAGGATAGTATTGAAGGGATTTATGATACATTGAAGGAGTGTGCTGTTATTAGTAAATCTGCAGGAGGAATTGGTGTTTCTGTTCACAACATACGTGCCCATGGTAGTTACATTCGGGGAACAAATGGAACGTCTAATGGTATTGTTCCGATGCTGCGTGTGTTCAATGATACTGCCCGTTATGTTGATCAGGGAGGAGGCAAGAGGAAAGGTAAACCATTTTGTGATTTGTTTGGAATTCCTCAATTAGATGAACACTTGTTGATTGCTGTTACTTACGAGTGTTATGTGATTGTTGTAGGAGCTTTTGCCGTGTACTTGGAGCCATGGCATGCTGATATATTTGAGTTCTTGGAATTGAAAATAAATCATGGAAAGGAAGAACAACGTGCTCGAGATTTATTTTACGCCCTTTGGGTGCCTGATCTCTTTATGGAAAGAGTTCAGAGCAACGGGGAATGGTCCCTGTTCTGCCCCAATGAAGCACCTGGTTTGGCAGATTGTTGGGGTGAAGAATATGATAAGTTGTACACTCAGTATGAAAAAGCAGGAAAAGCAAAAAAGATTGTTCAAGCACAGAGTCTGTGGTTTGCAATTTTGAAGTCACAGATAGAAACTGGAAATCCTTACATGCTTTTTAAGGATGCTTGCAATAGGAAAAGCAACCAGCAGAATCTGGGCACAATTAAGTCATCAAATCTGTGCACTGAGATAATCGAGTATACAAGTCCAACAGAAACTGCTGTGTGTAACCTTGCATCAATTGCCCTACCGCGTTATGTAAGAGATAAGGGTTTACCTGTGGAGTCTCATCAGTCTAAGCTTGTTGGGAGCAGAGGCTCTAGTAGTCGGTATTTTGACTTTGAAAAACTAGGAGAGGTTACTGCTGTGGTGACAACCAACCTTAATAAAATAATCGATGTCAACTACTACCCAGTTGAAACTGCAGAAAGGTCAAACTTGCGGCACAGACCCATTGGTATTGGAGTTCAGGGTCTTGCTGATACCTTTATACTACTAGGAATGGCATTTGATTCACCAGAGGCTCAACAGTTAAACAAGGATATTTTTGAGACTATATACTACCATGCTCTGAAAACTTCTTGTGAATTAGCTGCAAAAGAAGGCCCCTATGAAACTTATAGTGGTAGTCCTGTAAGCAAGGGAATTCTTCAGCCTGACATGTGGGGTGTGACTCCCTCCAATTTGTGGGATTGGGGTGCACTTCGGGAGATGATATCAAAGACAGGTGTACGAAATTCACTTCTTGTTGCCCCTATGCCAACTGCATCTACCAGTCAAATTCTTGGCAATAACGAGTGTTTTGAACCATATACTTCTAATATCTACAATCGCAGAGTGCTAAGTGGTGAGTTCGTTGTAGTGAACAAGCATCTTCTTCACGATTTGACTGAAATGGGACTGTGGAATCCTGCACTTAAGAATAAGATTATCTATGACAACGGTTCAGTACAGAATCTGTCAGAAATACCTGCTGAACTGAAAGTCATATACAAAACTGTTTGGGAGATCAAGCAAAAGATATTGGTTGATATGGCTGTTGATCGAGGATGTTACATAGATCAGAGTCAAAGTTTAAATATACACATGGATAAACCCAACTTTGGAAAGCTTACTTCCTTGCATTTTTATGCTTGGTCAAAGGGTTTGAAGACTGGGATGTACTACCTCCGAACCCGAGCTGCAAGTGATGCCATCAAGTTCACTGTTGATACCTCTGGCATTAAAGATCAACCTAAGGTGAAGGAGTCAGATGATGAGGATGATGATACCAAGATGGCACAGATGGTGTGCTCTTTGACAAACAGAGACGAGTGTGAGGCCTGTGGAAGTTGA
Protein sequence

>Msa0568710

MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVAQKVCAGVYKGVTTSQLDELAAETAAGMTANHPDYASLAARIAVSNLHKNTLKSFSETVKVMYNHFNHRSGKKAPLIADDVYEIIIKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGVVVERPQHMIMRVSVGIHKDDVESAVKTYHFMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKEDSIEGIYDTLKECAVISKSAGGIGVSVHNIRAHGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGKPFCDLFGIPQLDEHLLIAVTYECYVIVVGAFAVYLEPWHADIFEFLELKINHGKEEQRARDLFYALWVPDLFMERVQSNGEWSLFCPNEAPGLADCWGEEYDKLYTQYEKAGKAKKIVQAQSLWFAILKSQIETGNPYMLFKDACNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRYVRDKGLPVESHQSKLVGSRGSSSRYFDFEKLGEVTAVVTTNLNKIIDVNYYPVETAERSNLRHRPIGIGVQGLADTFILLGMAFDSPEAQQLNKDIFETIYYHALKTSCELAAKEGPYETYSGSPVSKGILQPDMWGVTPSNLWDWGALREMISKTGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYNRRVLSGEFVVVNKHLLHDLTEMGLWNPALKNKIIYDNGSVQNLSEIPAELKVIYKTVWEIKQKILVDMAVDRGCYIDQSQSLNIHMDKPNFGKLTSLHFYAWSKGLKTGMYYLRTRAASDAIKFTVDTSGIKDQPKVKESDDEDDDTKMAQMVCSLTNRDECEACGS*