AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1228870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1228870 MtrunA17_Chr8g0335661 95.772 1088 44 2 1 1087 1 1087 0.0 2107
Msa1228870 MtrunA17_Chr4g0045841 29.091 165 95 5 905 1065 200 346 7.22e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1228870 AT4G16970.1 54.373 526 213 8 555 1074 367 871 0.0 556

Find 273 sgRNAs with CRISPR-Local

Find 561 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGTTCAGATCTCAGTTTC+AGG 0.190414 8_2:+4486462 Msa1228870:CDS
CGGAATATGCTTGAGCGTTT+TGG 0.199917 8_2:+4483603 Msa1228870:CDS
AATACCTTAACGAAAATTTC+TGG 0.203122 8_2:-4480555 None:intergenic
CTCTTCACTGCCCCGCAATT+TGG 0.205385 8_2:-4486661 None:intergenic
AGGCTCTAACATCCAATAAA+AGG 0.206842 8_2:+4484945 Msa1228870:CDS
AGTGAAACGGAGTTGAATTT+TGG 0.214768 8_2:-4480356 None:intergenic
ATGGATTGCTTTGACTCATT+TGG 0.234727 8_2:+4481816 Msa1228870:CDS
CATTCATCTACGGTTGCTTT+GGG 0.247411 8_2:+4485337 Msa1228870:CDS
ATTAAATCAAACAATGATTT+CGG 0.248376 8_2:-4487564 None:intergenic
TTAAATCAAACAATGATTTC+GGG 0.250887 8_2:-4487563 None:intergenic
AACATTATCAAATTTGTTAC+AGG 0.266909 8_2:-4482414 None:intergenic
TTTGAGTCTCGGATTGTAAA+TGG 0.273704 8_2:+4481489 Msa1228870:CDS
TGGTTCCGGCGGAGACATTT+TGG 0.278740 8_2:-4480079 None:intergenic
GAGAAAGAGAAGTGTGGAAA+TGG 0.285230 8_2:-4480028 None:intergenic
CTTTCTTCCTTTGAAGGGTA+TGG 0.287157 8_2:-4485173 None:intergenic
ACATTCATCTACGGTTGCTT+TGG 0.289832 8_2:+4485336 Msa1228870:CDS
TGGATTGCTTTGACTCATTT+GGG 0.302207 8_2:+4481817 Msa1228870:CDS
AACATTATCAGATTTGTTAC+AGG 0.302478 8_2:-4482639 None:intergenic
AGAAGATCCGACAGATGTTT+TGG 0.307148 8_2:+4482040 Msa1228870:CDS
AGAAGAGCCAACAAAAGTTT+TGG 0.311700 8_2:+4482199 Msa1228870:CDS
AGCAAATTGACTTGCGTTTA+CGG 0.311768 8_2:-4480380 None:intergenic
CGAGAGAAAAGGAAGTTTCC+AGG 0.319522 8_2:-4484263 None:intergenic
TATTCCTTGGGTTTACTGTT+AGG 0.322982 8_2:-4487596 None:intergenic
TAAATTCGCAACAGCCTTAT+CGG 0.327666 8_2:-4485059 None:intergenic
GATATTTCTTTAGGTGGTTA+TGG 0.330159 8_2:+4483025 Msa1228870:intron
GGGCATGCATGTATTAGATT+TGG 0.331939 8_2:+4482232 Msa1228870:CDS
TTCCTCCAAGATTCTTGTCT+TGG 0.332691 8_2:-4484919 None:intergenic
CTTTGAAGGGTATGGGTTCT+CGG 0.333470 8_2:-4485165 None:intergenic
GAGCTACTTTATTGTTAGAC+TGG 0.342320 8_2:-4482511 None:intergenic
TAATTAACCAATCCTTCCTT+TGG 0.344266 8_2:-4481960 None:intergenic
GTCCTTCTTCTCAGAGGAAA+AGG 0.345324 8_2:+4485254 Msa1228870:CDS
TGCGGGGCAGTGAAGAGCTT+TGG 0.350904 8_2:+4486667 Msa1228870:CDS
GCTTCCCTGTATTTGAAATT+CGG 0.353794 8_2:-4481573 None:intergenic
GAAGATTTCAGAAGCTGCTT+TGG 0.357370 8_2:-4482548 None:intergenic
AAAAGAAATTGCCAAATTGC+GGG 0.357929 8_2:+4486650 Msa1228870:CDS
GCGAGTTGCGGTGGTGGTTC+CGG 0.362514 8_2:-4480093 None:intergenic
GAAGGTTTCAGAAGCTGCTT+TGG 0.362927 8_2:-4482323 None:intergenic
TAGAAATCCGTTACTGTTAA+CGG 0.364241 8_2:-4480280 None:intergenic
AATGATGATGTTGTTGGTAT+TGG 0.365035 8_2:+4481780 Msa1228870:CDS
TCACCAATTGCAAGCCGTTT+CGG 0.366080 8_2:-4480525 None:intergenic
GATTCAATTGGAGAATGTTC+AGG 0.367519 8_2:+4481540 Msa1228870:CDS
CATTACACAAAGATTGATCT+TGG 0.372033 8_2:-4481761 None:intergenic
ACGACTAATTGCAGAGAAAC+TGG 0.378110 8_2:+4487841 Msa1228870:three_prime_UTR
TATTGGATCAGAGGACAAAA+TGG 0.381016 8_2:+4481797 Msa1228870:CDS
CCTATACGTATTGATTCAAT+TGG 0.381191 8_2:+4481528 Msa1228870:CDS
CAGAACCGAATTTCAAATAC+AGG 0.382659 8_2:+4481568 Msa1228870:CDS
TTAACGGAGAGAGGAGAATC+AGG 0.386785 8_2:-4480264 None:intergenic
GCAAATTGACTTGCGTTTAC+GGG 0.391662 8_2:-4480379 None:intergenic
AGAAAGAGAAGTGTGGAAAT+GGG 0.393398 8_2:-4480027 None:intergenic
AGGGCCCTAAGGTTGATATT+TGG 0.397053 8_2:+4486482 Msa1228870:CDS
CTCTACTATACATGCTGATT+GGG 0.397374 8_2:+4486518 Msa1228870:CDS
GAAATCTTCTCGCATGTTGA+AGG 0.398448 8_2:+4482562 Msa1228870:CDS
CTTTGTGTGCAACTTGCACC+AGG 0.400113 8_2:-4487517 None:intergenic
TCAACACTAATCCTATTCCT+TGG 0.401290 8_2:-4487609 None:intergenic
TAACAGTAAACCCAAGGAAT+AGG 0.401457 8_2:+4487598 Msa1228870:CDS
ATAGAGGAAGAAGAAGGTTC+AGG 0.401686 8_2:+4482932 Msa1228870:CDS
TTTCTTCCTTTGAAGGGTAT+GGG 0.403192 8_2:-4485172 None:intergenic
CAACACTAATCCTATTCCTT+GGG 0.403336 8_2:-4487608 None:intergenic
TAAAGAGGAAAGAGGTTTGA+AGG 0.404692 8_2:+4482103 Msa1228870:CDS
GCGGGGCAGTGAAGAGCTTT+GGG 0.404708 8_2:+4486668 Msa1228870:CDS
TTGATATATGTGAGCTTCAA+TGG 0.406835 8_2:+4484085 Msa1228870:CDS
CCAATTGAATCAATACGTAT+AGG 0.408213 8_2:-4481528 None:intergenic
AGATAACTTCATGACTTCTA+AGG 0.409633 8_2:+4482745 Msa1228870:CDS
AACTGTATTATAAAGTTTGA+AGG 0.410114 8_2:+4483714 Msa1228870:CDS
AAGCTCCTTTCTTCCTTTGA+AGG 0.411995 8_2:-4485179 None:intergenic
AGTGACTCGGTTAGAATTTG+AGG 0.413649 8_2:-4482389 None:intergenic
ACTAATGAAGAAACTCTCAT+TGG 0.417441 8_2:-4481655 None:intergenic
AAAAGGGTTACTGCTCCTTC+AGG 0.418092 8_2:+4485271 Msa1228870:CDS
GCAACGTGACGGACGAAATC+CGG 0.419646 8_2:-4480234 None:intergenic
TTCCTACGATCTGCCAGATC+TGG 0.424122 8_2:-4484974 None:intergenic
CAGTGAAGAGCTTTGGGAGG+TGG 0.427916 8_2:+4486674 Msa1228870:CDS
GCTCCTTCAGGCAAGGTAGA+TGG 0.430458 8_2:+4485283 Msa1228870:CDS
ACTCTACTATACATGCTGAT+TGG 0.431671 8_2:+4486517 Msa1228870:CDS
ACTAGCACTAAGACTGCTTC+TGG 0.436335 8_2:+4485133 Msa1228870:CDS
GATCCGAAACGGCTTGCAAT+TGG 0.437310 8_2:+4480522 Msa1228870:CDS
CCGCTTCTTCAACGCTTCGC+CGG 0.437967 8_2:+4480215 Msa1228870:CDS
CCCTACTGTGGATGGTGAAA+AGG 0.438053 8_2:+4481866 Msa1228870:CDS
AGACGGGAGAGGAATATTAC+TGG 0.438464 8_2:-4484879 None:intergenic
GAAACCTTCTCGCACATTGA+AGG 0.438686 8_2:+4482337 Msa1228870:CDS
CTAGCTGAAATCACAGGTTA+TGG 0.445380 8_2:-4487958 None:intergenic
AGTAATATTCCTCTCCCGTC+TGG 0.446156 8_2:+4484881 Msa1228870:CDS
TTCTCTCGAAAGCTAAAGAA+AGG 0.446434 8_2:+4484278 Msa1228870:CDS
GAGGAGAGAGAGGAGGTGCC+AGG 0.448642 8_2:-4480145 None:intergenic
CGTCGACGGGATGACCGATC+TGG 0.449155 8_2:-4480170 None:intergenic
ATTATAAAAGATTCAAAAGA+TGG 0.450944 8_2:-4482911 None:intergenic
TTGTGTAATGATGATGTTGT+TGG 0.453868 8_2:+4481774 Msa1228870:CDS
GCCGACCAAATATCAACCTT+AGG 0.456009 8_2:-4486487 None:intergenic
TATTCCGCTCATTATTTACA+TGG 0.456851 8_2:-4483587 None:intergenic
AAGGTTGATATTTGGTCGGC+TGG 0.458152 8_2:+4486490 Msa1228870:CDS
AAAAGGAGTAGGAGCGGAGC+GGG 0.458873 8_2:-4479983 None:intergenic
GTGGTCCAAGACAAGAATCT+TGG 0.458901 8_2:+4484914 Msa1228870:CDS
TTTGAAGGTTCTTTCAAAAG+TGG 0.458914 8_2:+4483729 Msa1228870:CDS
AGGATTGGTCTTCGAGGAGT+GGG 0.459706 8_2:-4480125 None:intergenic
GTGCAATGAAATTTGAGTCT+CGG 0.462949 8_2:+4481478 Msa1228870:CDS
TATATACATCTATCAATGTA+TGG 0.464989 8_2:-4487819 None:intergenic
GGATCTTCTCCACATGCTAC+AGG 0.465432 8_2:-4482026 None:intergenic
GATTGATCTTGGACACTAGT+TGG 0.465730 8_2:-4481750 None:intergenic
AACAAAGGGTTTCCGTGCCC+CGG 0.466552 8_2:+4485505 Msa1228870:CDS
CACTCCTCGAAGACCAATCC+TGG 0.468253 8_2:+4480127 Msa1228870:CDS
TAAAAGGGAATTGCCAGATC+TGG 0.468469 8_2:+4484961 Msa1228870:CDS
GGCTCTTCTCCACATACTAC+AGG 0.475497 8_2:-4482185 None:intergenic
CTTAGTGCTAGTAACATCTC+TGG 0.475547 8_2:-4485122 None:intergenic
TCCAATTCCAAAACATCTGT+CGG 0.478188 8_2:-4482047 None:intergenic
AACATTATTGAAGGTGATGA+AGG 0.478543 8_2:+4482467 Msa1228870:CDS
AATGATCAGAACATTATTGA+AGG 0.479243 8_2:+4482458 Msa1228870:CDS
AAATTCGCAACAGCCTTATC+GGG 0.479709 8_2:-4485058 None:intergenic
TTGTTCAGATCTCAGTTTCA+GGG 0.479868 8_2:+4486463 Msa1228870:CDS
GGCTCTAACATCCAATAAAA+GGG 0.480027 8_2:+4484946 Msa1228870:CDS
GGTCCATGTGTTGGAACAAA+GGG 0.481545 8_2:+4485491 Msa1228870:CDS
GCAACCGTAGATGAATGTAT+AGG 0.482776 8_2:-4485331 None:intergenic
AGATTCTTGTCTTGGACCAC+AGG 0.483607 8_2:-4484911 None:intergenic
AGGATGCTTCAACGAGGACT+TGG 0.483684 8_2:+4487687 Msa1228870:CDS
CCGACCAAATATCAACCTTA+GGG 0.486366 8_2:-4486486 None:intergenic
CCACTGGAAAGGATGTTTCA+CGG 0.486521 8_2:-4486710 None:intergenic
ATTGGGAAAACTTCTTTCCC+TGG 0.486809 8_2:+4486535 Msa1228870:CDS
ATCTCAGTTTCAGGGCCCTA+AGG 0.486826 8_2:+4486471 Msa1228870:CDS
GGATGAGAGAGAGAGTGAAA+AGG 0.489149 8_2:-4480000 None:intergenic
CAATACTGTTTGACCTGAAG+AGG 0.489477 8_2:+4487776 Msa1228870:three_prime_UTR
GGATCGGCGAGTTGCGGTGG+TGG 0.491104 8_2:-4480099 None:intergenic
AGGTTTGTGATTGGTGTGGA+TGG 0.491650 8_2:-4488000 None:intergenic
TCTTTAGCTTTCGAGAGAAA+AGG 0.491702 8_2:-4484274 None:intergenic
GATGGAAGATGTTGCTCAAA+GGG 0.492219 8_2:+4481998 Msa1228870:CDS
TTCGAGGAGTGGGGTTGGAT+CGG 0.492980 8_2:-4480115 None:intergenic
GAGAGAGGAGGTGCCAGGAT+TGG 0.493624 8_2:-4480140 None:intergenic
AAGAGGTCCAAAGGAAGGAT+TGG 0.493708 8_2:+4481953 Msa1228870:CDS
CAAGAATCTTGGAGGAATCA+AGG 0.494455 8_2:+4484925 Msa1228870:CDS
TTTATAATAGAGGAAGAAGA+AGG 0.495240 8_2:+4482926 Msa1228870:CDS
TTACTGGATGCATCAAGCCT+TGG 0.496091 8_2:-4484863 None:intergenic
GAGGAAAGAGGTTTGAAGGA+AGG 0.496387 8_2:+4482107 Msa1228870:CDS
TGGTCTTCGAGGAGTGGGGT+TGG 0.497658 8_2:-4480120 None:intergenic
AGCACAAGGAGCAGATGGCT+CGG 0.498407 8_2:+4485087 Msa1228870:CDS
CTCTCTCTCCTCCTCCAGAT+CGG 0.499013 8_2:+4480156 Msa1228870:CDS
AAACCTTCTCGCACATTGAA+GGG 0.499606 8_2:+4482338 Msa1228870:CDS
AAGCTGCTTTCGCCATGGCT+AGG 0.503048 8_2:+4480316 Msa1228870:CDS
AGAAGTGTGGAAATGGGAAG+AGG 0.505366 8_2:-4480021 None:intergenic
GCACAAGGAGCAGATGGCTC+GGG 0.506807 8_2:+4485088 Msa1228870:CDS
TAAAAGAAATTGCCAAATTG+CGG 0.506980 8_2:+4486649 Msa1228870:CDS
AGCTCCTTTCTTCCTTTGAA+GGG 0.508081 8_2:-4485178 None:intergenic
CGTTGAAGCTGCTTTCGCCA+TGG 0.511259 8_2:+4480311 Msa1228870:CDS
TTGCGTTTACGGGAGTGAAA+CGG 0.511839 8_2:-4480369 None:intergenic
AAGAAGGGATTGAGAGAAGC+GGG 0.515422 8_2:+4479938 None:intergenic
TCCTTCTTCTCAGAGGAAAA+GGG 0.519310 8_2:+4485255 Msa1228870:CDS
ATATGTGAGCTTCAATGGTA+TGG 0.520457 8_2:+4484090 Msa1228870:CDS
CATACCCTTCAAAGGAAGAA+AGG 0.520571 8_2:+4485174 Msa1228870:CDS
TTAGTGTTGAAGATGTTCTC+AGG 0.521851 8_2:+4487622 Msa1228870:CDS
TTCTCCACATACTACAGGAT+TGG 0.524046 8_2:-4482180 None:intergenic
ATGGTCAAAGGAGAGATATC+TGG 0.525173 8_2:+4481618 Msa1228870:CDS
AGCTGCTTTGGATTTGAAGA+GGG 0.525993 8_2:-4482536 None:intergenic
TGAAATTCGTAAGCATATGA+AGG 0.528442 8_2:+4485003 Msa1228870:CDS
TATGTGAGCTTCAATGGTAT+GGG 0.529053 8_2:+4484091 Msa1228870:CDS
TATTGAAGGTGATGAAGGTA+AGG 0.529301 8_2:+4482472 Msa1228870:CDS
GTTCACAGAGATGTTAAACC+TGG 0.530796 8_2:+4484245 Msa1228870:CDS
AGCTACTTTATTGTTAGACT+GGG 0.530901 8_2:-4482510 None:intergenic
GATGGAAGATGTTGCTCTGA+GGG 0.532805 8_2:+4482157 Msa1228870:CDS
CATGGCGAAAGCAGCTTCAA+CGG 0.534287 8_2:-4480310 None:intergenic
AAACCCTTTGTTCCAACACA+TGG 0.534397 8_2:-4485494 None:intergenic
CATCAGTTGTTCTATGAGCA+CGG 0.536001 8_2:-4483057 None:intergenic
AGAAGAGAAAAGAGGTCCAA+AGG 0.536493 8_2:+4481944 Msa1228870:CDS
CGTGCTCATAGAACAACTGA+TGG 0.537080 8_2:+4483058 Msa1228870:CDS
TGGCAAGGTTGAAGTCGATA+AGG 0.538478 8_2:-4484304 None:intergenic
GAGAAAAGAGGTCCAAAGGA+AGG 0.538859 8_2:+4481948 Msa1228870:CDS
ATAAATAAAGAAGAGAAAAG+AGG 0.539398 8_2:+4481936 Msa1228870:CDS
CAGGATTGGTCTTCGAGGAG+TGG 0.540284 8_2:-4480126 None:intergenic
GAGAGAGAGTGAAAAGGAGT+AGG 0.540562 8_2:-4479994 None:intergenic
TGTTTCACGGTCATGCAGCT+TGG 0.540699 8_2:-4486697 None:intergenic
AACATAACCCCTACTGTGGA+TGG 0.541969 8_2:+4481858 Msa1228870:CDS
CCCTAAGGTTGATATTTGGT+CGG 0.545440 8_2:+4486486 Msa1228870:CDS
ATGAAGGCAAAAGCGGATGC+TGG 0.545882 8_2:+4485019 Msa1228870:CDS
CGATCTGGAGGAGGAGAGAG+AGG 0.549243 8_2:-4480155 None:intergenic
CCGGCGAAGCGTTGAAGAAG+CGG 0.552425 8_2:-4480215 None:intergenic
AAGCTGCTTTGGATTTGAAG+AGG 0.554463 8_2:-4482312 None:intergenic
CTAAGACTGCTTCTGGCGAT+AGG 0.555438 8_2:+4485140 Msa1228870:CDS
GTTGGATCGGCGAGTTGCGG+TGG 0.555635 8_2:-4480102 None:intergenic
GTAGATGAATGTATAGGCAT+TGG 0.557803 8_2:-4485325 None:intergenic
GGGTCCATGTGTTGGAACAA+AGG 0.561472 8_2:+4485490 Msa1228870:CDS
CGTTGAAGAAGCGGCAACGA+AGG 0.561497 8_2:-4480206 None:intergenic
GAGAGAGAGAAAGAGAAGTG+TGG 0.561663 8_2:-4480034 None:intergenic
AGATGGAAGATGTTGCTCAA+AGG 0.563134 8_2:+4481997 Msa1228870:CDS
AAGAATTTACCTCCGGGGCA+CGG 0.563272 8_2:-4485517 None:intergenic
AAGCTGCTTTGGATTTGAAG+AGG 0.565073 8_2:-4482537 None:intergenic
GATTCTTGTCTTGGACCACA+GGG 0.566206 8_2:-4484910 None:intergenic
CCTCTCTCCGTTAACAGTAA+CGG 0.568053 8_2:+4480273 Msa1228870:CDS
GGGGAAGAACCAGACGGGAG+AGG 0.568805 8_2:-4484890 None:intergenic
GAAAAGGAGTAGGAGCGGAG+CGG 0.570319 8_2:-4479984 None:intergenic
AGGGCCAATCCTGTAGTATG+TGG 0.571063 8_2:+4482176 Msa1228870:CDS
CGTAGAGCACAAGGAGCAGA+TGG 0.571518 8_2:+4485082 Msa1228870:CDS
ATATCAGTTTCATGAACTGT+AGG 0.573464 8_2:+4487743 Msa1228870:exon
TTATGAGAATGATAGAGAGA+TGG 0.574463 8_2:+4481980 Msa1228870:CDS
CCGTTACTGTTAACGGAGAG+AGG 0.575451 8_2:-4480273 None:intergenic
AAAAGAGAGGGTCCATGTGT+TGG 0.577815 8_2:+4485482 Msa1228870:CDS
GTCCAAGACAAGAATCTTGG+AGG 0.578441 8_2:+4484917 Msa1228870:CDS
CGGGATGACCGATCTGGAGG+AGG 0.579997 8_2:-4480164 None:intergenic
TCTTCTCGCATGTTGAAGGA+TGG 0.580399 8_2:+4482566 Msa1228870:CDS
TTGGGGTTATTAAGAAGCAA+AGG 0.581215 8_2:+4485355 Msa1228870:CDS
TTTGTTACAGGCTAGTGACT+CGG 0.581585 8_2:-4482402 None:intergenic
CTGCCATCTACCTTGCCTGA+AGG 0.582954 8_2:-4485286 None:intergenic
AAAGGAATTTACCACTGGAA+AGG 0.583882 8_2:-4486721 None:intergenic
TATCGACTTCAACCTTGCCA+TGG 0.583985 8_2:+4484307 Msa1228870:CDS
CGAGAACCCATACCCTTCAA+AGG 0.583989 8_2:+4485166 Msa1228870:CDS
CCGATCCAAAATGTCTCCGC+CGG 0.584581 8_2:+4480074 Msa1228870:exon
AACCTTCTCGCACATTGAAG+GGG 0.587830 8_2:+4482339 Msa1228870:CDS
CGAGGGTCTAGATAGATTCG+TGG 0.588972 8_2:+4481698 Msa1228870:CDS
TGGTGGAGCAAGATTAGCAA+AGG 0.589902 8_2:-4481730 None:intergenic
TGTCATATGATTGCAAGTAT+CGG 0.590214 8_2:-4487488 None:intergenic
TGATCTTGGACACTAGTTGG+TGG 0.590604 8_2:-4481747 None:intergenic
GCGAAAGCAGCTTCAACGGA+AGG 0.591262 8_2:-4480306 None:intergenic
GCTAGTAACATCTCTGGCAG+AGG 0.593503 8_2:-4485116 None:intergenic
GGTGCCAGGATTGGTCTTCG+AGG 0.593716 8_2:-4480131 None:intergenic
CTTCAGGCAAGGTAGATGGC+AGG 0.594037 8_2:+4485287 Msa1228870:CDS
GGGGTTGGATCGGCGAGTTG+CGG 0.594221 8_2:-4480105 None:intergenic
AATACTGTTTGACCTGAAGA+GGG 0.594313 8_2:+4487777 Msa1228870:three_prime_UTR
CAGGTGGAAGAGATCCGAAA+CGG 0.595991 8_2:+4480511 Msa1228870:intron
GGTGGAGCAAGATTAGCAAA+GGG 0.597178 8_2:-4481729 None:intergenic
AATGCCTATACATTCATCTA+CGG 0.599137 8_2:+4485327 Msa1228870:CDS
AGAGTGAAAAGGAGTAGGAG+CGG 0.599825 8_2:-4479989 None:intergenic
AGTCTCGGATTGTAAATGGT+GGG 0.602244 8_2:+4481493 Msa1228870:CDS
TCAATTTGCTCAATCACTCA+AGG 0.603232 8_2:+4480393 Msa1228870:CDS
GTTGAAGAAGCGGCAACGAA+GGG 0.603458 8_2:-4480205 None:intergenic
GGTCAGGTTTGTGATTGGTG+TGG 0.604438 8_2:-4488004 None:intergenic
CCACAGGGGAAGAACCAGAC+GGG 0.606761 8_2:-4484895 None:intergenic
GAAGAAGGGATTGAGAGAAG+CGG 0.608261 8_2:+4479937 None:intergenic
TTGCAACTAGCTGAAATCAC+AGG 0.608961 8_2:-4487964 None:intergenic
ACCTTCTCGCACATTGAAGG+GGG 0.609586 8_2:+4482340 Msa1228870:CDS
GGCATAACAAGCATGGTCAA+AGG 0.610521 8_2:+4481606 Msa1228870:CDS
GAGTCTCGGATTGTAAATGG+TGG 0.614229 8_2:+4481492 Msa1228870:CDS
TGCCAGATCTGGCAGATCGT+AGG 0.614643 8_2:+4484972 Msa1228870:CDS
GCGAATTTACGTAGAGCACA+AGG 0.616884 8_2:+4485073 Msa1228870:CDS
CCCGTCTGGTTCTTCCCCTG+TGG 0.618731 8_2:+4484895 Msa1228870:CDS
GGGCAGTGAAGAGCTTTGGG+AGG 0.619718 8_2:+4486671 Msa1228870:CDS
ATTCATCTACGGTTGCTTTG+GGG 0.621492 8_2:+4485338 Msa1228870:CDS
AGTTGCGGTGGTGGTTCCGG+CGG 0.621987 8_2:-4480090 None:intergenic
TAAGCATATGAAGGCAAAAG+CGG 0.635350 8_2:+4485012 Msa1228870:CDS
AGATGGAAGATGTTGCTCTG+AGG 0.636022 8_2:+4482156 Msa1228870:CDS
GGTTACTGCTCCTTCAGGCA+AGG 0.636110 8_2:+4485276 Msa1228870:CDS
TACAGGGAAGCTGATAATGA+CGG 0.636287 8_2:+4481585 Msa1228870:CDS
CGACGGGATGACCGATCTGG+AGG 0.637015 8_2:-4480167 None:intergenic
TGAAAAGTCCTTCTTCTCAG+AGG 0.638414 8_2:+4485248 Msa1228870:CDS
TTTACTGTTCTGGTTCGCCA+GGG 0.640055 8_2:-4486552 None:intergenic
GACGGAAAACATAAAAGAGA+GGG 0.640908 8_2:+4485470 Msa1228870:CDS
GAGGGTCTAGATAGATTCGT+GGG 0.642595 8_2:+4481699 Msa1228870:CDS
GCTGAAATCACAGGTTATGG+TGG 0.643483 8_2:-4487955 None:intergenic
ACTTGCGTGCTTGCACAAAG+AGG 0.643572 8_2:+4484131 Msa1228870:CDS
AAGTGACTCGAGGAAGCTCG+AGG 0.646512 8_2:+4481680 Msa1228870:CDS
AGAACCGAATTTCAAATACA+GGG 0.647420 8_2:+4481569 Msa1228870:CDS
GGATTGGTCTTCGAGGAGTG+GGG 0.647884 8_2:-4480124 None:intergenic
TGTTGTTGGTATTGGATCAG+AGG 0.649031 8_2:+4481788 Msa1228870:CDS
AAAGAAATTGCCAAATTGCG+GGG 0.650726 8_2:+4486651 Msa1228870:CDS
AAAACCATGTAAATAATGAG+CGG 0.651500 8_2:+4483583 Msa1228870:CDS
TAATGACGGCATAACAAGCA+TGG 0.654148 8_2:+4481599 Msa1228870:CDS
GAAGCAACCTAACCATGGCA+AGG 0.654219 8_2:-4484319 None:intergenic
TGAAGGTAAGGATCAGAACA+TGG 0.659752 8_2:+4482484 Msa1228870:CDS
ACTCAGGTAAATCAAAACCA+AGG 0.660436 8_2:+4484846 Msa1228870:intron
AGTGCCTAACAGTAAACCCA+AGG 0.662467 8_2:+4487592 Msa1228870:CDS
AGTGACTCGAGGAAGCTCGA+GGG 0.663036 8_2:+4481681 Msa1228870:CDS
ACAAAACATAACCCCTACTG+TGG 0.663994 8_2:+4481854 Msa1228870:CDS
GGACGGAAAACATAAAAGAG+AGG 0.664528 8_2:+4485469 Msa1228870:CDS
CAGGAAGTGAAGCAACGTGA+CGG 0.666927 8_2:-4480245 None:intergenic
CTGGCACATAATGTAAACTG+TGG 0.669112 8_2:+4487860 Msa1228870:three_prime_UTR
TTGAAGCAGAAGTACAACAT+CGG 0.674249 8_2:+4484419 Msa1228870:CDS
AATCATATGACATAGAAACC+TGG 0.675049 8_2:+4487499 Msa1228870:CDS
TCTGGAGGAGGAGAGAGAGG+AGG 0.676330 8_2:-4480152 None:intergenic
TCATTAGTGAAAGTGACTCG+AGG 0.676728 8_2:+4481670 Msa1228870:CDS
ATGAGATCATGAGAAAGACA+AGG 0.685426 8_2:+4487667 Msa1228870:CDS
AAAGGGTTTCCGTGCCCCGG+AGG 0.686493 8_2:+4485508 Msa1228870:CDS
ACCACAGGGGAAGAACCAGA+CGG 0.689092 8_2:-4484896 None:intergenic
TCTCATGATCTCATTACACG+AGG 0.690799 8_2:-4487658 None:intergenic
CCGTGAAACATCCTTTCCAG+TGG 0.691680 8_2:+4486710 Msa1228870:CDS
GATCGGTCATCCCGTCGACG+CGG 0.695572 8_2:+4480173 Msa1228870:CDS
CCTTCTCGCACATTGAAGGG+GGG 0.716670 8_2:+4482341 Msa1228870:CDS
TGTTGAGCATGAGAGACCTG+AGG 0.737768 8_2:+4483779 Msa1228870:CDS
ATTCTTGTCTTGGACCACAG+GGG 0.743915 8_2:-4484909 None:intergenic
AAGACAAGGATGCTTCAACG+AGG 0.751606 8_2:+4487681 Msa1228870:CDS
ATTGCATAGAATTCTGCACG+AGG 0.772903 8_2:-4485207 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATAATTTTAATAGTGTTT+AGG + chr8_2:4480647-4480666 Msa1228870:intron 10.0%
!! AAAAAAAAATTGATATTTGT+GGG + chr8_2:4483978-4483997 Msa1228870:intron 10.0%
!!! TTTTCAATAATTTTAATTCA+CGG + chr8_2:4486420-4486439 Msa1228870:intron 10.0%
!!! AAATTCCTTTTTTTTTTTTT+TGG + chr8_2:4486734-4486753 Msa1228870:intron 10.0%
!!! TTGATAATTTTAGATTTTGT+AGG + chr8_2:4480870-4480889 Msa1228870:intron 15.0%
!!! TTTATTTTTCTTCAAAAGTT+TGG + chr8_2:4481318-4481337 Msa1228870:intron 15.0%
!! ATCTATTGAAAAATATAAAG+AGG + chr8_2:4482088-4482107 Msa1228870:CDS 15.0%
!!! TTACTTTGATCAATTTTTTT+TGG - chr8_2:4482440-4482459 None:intergenic 15.0%
!! ATTATAAAAGATTCAAAAGA+TGG - chr8_2:4482914-4482933 None:intergenic 15.0%
!!! TTTTGAATCTTTTATAATAG+AGG + chr8_2:4482916-4482935 Msa1228870:CDS 15.0%
!!! TTATATTTTAAGTAGGAAAA+AGG - chr8_2:4483259-4483278 None:intergenic 15.0%
!! TCGTAGTTAAAAAAAAATAT+AGG - chr8_2:4483648-4483667 None:intergenic 15.0%
!! GAAAAAAAAATTGATATTTG+TGG + chr8_2:4483977-4483996 Msa1228870:intron 15.0%
!! GTCAAAAAATAGATAATATT+TGG - chr8_2:4485603-4485622 None:intergenic 15.0%
!!! TCATATATTGATTTCTTTTT+CGG - chr8_2:4485755-4485774 None:intergenic 15.0%
!!! TGGTCAAATATTTAATTTAT+TGG + chr8_2:4486106-4486125 Msa1228870:intron 15.0%
!!! TTTGAAATATTACAAATGAT+AGG + chr8_2:4486215-4486234 Msa1228870:intron 15.0%
!! AGTATTATCTTTCTATAAAT+TGG + chr8_2:4486240-4486259 Msa1228870:intron 15.0%
!! AAAAAGTAATAAGGATTAAT+AGG - chr8_2:4486774-4486793 None:intergenic 15.0%
!!! TTAATCCTTATTACTTTTTT+TGG + chr8_2:4486775-4486794 Msa1228870:intron 15.0%
!!! TTTTCATGCTATTTAATTAT+AGG - chr8_2:4486827-4486846 None:intergenic 15.0%
!! AATTAAATAGCATGAAAAAA+TGG + chr8_2:4486829-4486848 Msa1228870:intron 15.0%
!!! AATTATGATTTTAATTGTTG+TGG + chr8_2:4487357-4487376 Msa1228870:intron 15.0%
!! ATTAAATCAAACAATGATTT+CGG - chr8_2:4487567-4487586 None:intergenic 15.0%
!!! TATTTTTTTTAAGAAATTGC+AGG + chr8_2:4487931-4487950 Msa1228870:three_prime_UTR 15.0%
!!! TAGTATTGTTATCGTTATTT+TGG + chr8_2:4481206-4481225 Msa1228870:intron 20.0%
!! ATAAATAAAGAAGAGAAAAG+AGG + chr8_2:4481936-4481955 Msa1228870:CDS 20.0%
!!! AAAAGTTTTGGAATTGAAAA+AGG + chr8_2:4482211-4482230 Msa1228870:CDS 20.0%
!!! AAAGTTTTGGAATTGAAAAA+GGG + chr8_2:4482212-4482231 Msa1228870:CDS 20.0%
!!! AACATTATCAAATTTGTTAC+AGG - chr8_2:4482417-4482436 None:intergenic 20.0%
!!! TAATGTTCTGTAAATCATTT+TGG + chr8_2:4482808-4482827 Msa1228870:intron 20.0%
!! ATTCAACAAAATAACCAAAA+TGG - chr8_2:4482870-4482889 None:intergenic 20.0%
!! ACATGTTTAACATAAAAGAT+AGG - chr8_2:4483114-4483133 None:intergenic 20.0%
!! TCCTACTTAAAATATAAAAC+TGG + chr8_2:4483262-4483281 Msa1228870:intron 20.0%
!!! TCCAGTTTTATATTTTAAGT+AGG - chr8_2:4483266-4483285 None:intergenic 20.0%
!! AACTGTATTATAAAGTTTGA+AGG + chr8_2:4483714-4483733 Msa1228870:CDS 20.0%
!!! TGTGAAAAAATAACTGTTTT+GGG + chr8_2:4483832-4483851 Msa1228870:intron 20.0%
!! TAATATTAAAAGAGGTTGAA+AGG - chr8_2:4483872-4483891 None:intergenic 20.0%
!! AATCAGCTTAATATTAAAAG+AGG - chr8_2:4483880-4483899 None:intergenic 20.0%
!! GATTATTTCCAAATATAATC+TGG + chr8_2:4484370-4484389 Msa1228870:intron 20.0%
!!! AAATGTGTTTCTTTTTTTCT+GGG - chr8_2:4484519-4484538 None:intergenic 20.0%
!!! AAAATGTGTTTCTTTTTTTC+TGG - chr8_2:4484520-4484539 None:intergenic 20.0%
!!! TCTATCCATTATTTTAGATA+TGG + chr8_2:4485850-4485869 Msa1228870:intron 20.0%
!! AGTTGCCAAAAAAAAAAAAA+AGG - chr8_2:4486742-4486761 None:intergenic 20.0%
!! TGTAACCAAAAAAAGTAATA+AGG - chr8_2:4486783-4486802 None:intergenic 20.0%
!! TAATTATAGGTTCTCAAATA+AGG - chr8_2:4486814-4486833 None:intergenic 20.0%
!! TATTAAGTTTCACTCAAATA+TGG + chr8_2:4486896-4486915 Msa1228870:intron 20.0%
!!! ACTAGTTTACTAGAAAAAAA+TGG + chr8_2:4487239-4487258 Msa1228870:intron 20.0%
!! ATTCTATTATTGTTTGAAGA+TGG + chr8_2:4487273-4487292 Msa1228870:intron 20.0%
!! TTAAATCAAACAATGATTTC+GGG - chr8_2:4487566-4487585 None:intergenic 20.0%
!! TATATACATCTATCAATGTA+TGG - chr8_2:4487822-4487841 None:intergenic 20.0%
!! TGTTAATTTTGTGTGTGTTT+TGG + chr8_2:4480459-4480478 Msa1228870:intron 25.0%
!!! GGTTTATTGATTTGAGATTT+TGG + chr8_2:4480483-4480502 Msa1228870:intron 25.0%
! AATACCTTAACGAAAATTTC+TGG - chr8_2:4480558-4480577 None:intergenic 25.0%
!! TTCTTACTTATTCACTCTTT+TGG + chr8_2:4480576-4480595 Msa1228870:intron 25.0%
!! TTTAGGTACATATTTTGTAG+TGG + chr8_2:4480664-4480683 Msa1228870:intron 25.0%
! ATTCATAACACTGTTTGATT+GGG + chr8_2:4481134-4481153 Msa1228870:intron 25.0%
! AAAAAATGCAACCATTTAGT+TGG + chr8_2:4481245-4481264 Msa1228870:intron 25.0%
! GAAAAATATAAAGAGGAAAG+AGG + chr8_2:4482095-4482114 Msa1228870:CDS 25.0%
!! TTCAATTCCAAAACTTTTGT+TGG - chr8_2:4482209-4482228 None:intergenic 25.0%
! AATGATCAGAACATTATTGA+AGG + chr8_2:4482458-4482477 Msa1228870:CDS 25.0%
!!! AACATTATCAGATTTGTTAC+AGG - chr8_2:4482642-4482661 None:intergenic 25.0%
! GTTCCAAAAAAAATTGATCA+AGG + chr8_2:4482434-4482453 Msa1228870:CDS 25.0%
!!! TGACCTTGATCAATTTTTTT+TGG - chr8_2:4482665-4482684 None:intergenic 25.0%
!!! TTTGGTTATTTTGTTGAATC+AGG + chr8_2:4482871-4482890 Msa1228870:intron 25.0%
! TTTATAATAGAGGAAGAAGA+AGG + chr8_2:4482926-4482945 Msa1228870:CDS 25.0%
!!! ATATCAACGCAATTTTAGTA+GGG - chr8_2:4483010-4483029 None:intergenic 25.0%
!!! AATATCAACGCAATTTTAGT+AGG - chr8_2:4483011-4483030 None:intergenic 25.0%
!! AATTGCGTTGATATTTCTTT+AGG + chr8_2:4483016-4483035 Msa1228870:intron 25.0%
! TACAATAGATTGTGAAATAG+AGG + chr8_2:4483398-4483417 Msa1228870:intron 25.0%
! TTGCAGATAATAGAAAATAG+TGG - chr8_2:4483469-4483488 None:intergenic 25.0%
! ATTTGTACATGTAATTTGAC+AGG + chr8_2:4483540-4483559 Msa1228870:intron 25.0%
! AAAACCATGTAAATAATGAG+CGG + chr8_2:4483583-4483602 Msa1228870:CDS 25.0%
! ATGAAAAGTTAAAGGACAAT+AGG - chr8_2:4483680-4483699 None:intergenic 25.0%
!!! CTTTAACTTTTCATGATTCA+GGG + chr8_2:4483686-4483705 Msa1228870:intron 25.0%
!!! TTTAACTTTTCATGATTCAG+GGG + chr8_2:4483687-4483706 Msa1228870:intron 25.0%
!! GTGTGAAAAAATAACTGTTT+TGG + chr8_2:4483831-4483850 Msa1228870:intron 25.0%
! AAATTGATATTTGTGGGAAA+TGG + chr8_2:4483984-4484003 Msa1228870:intron 25.0%
! AACTACATTACAGTAAAGAA+TGG - chr8_2:4484023-4484042 None:intergenic 25.0%
! AAGTTCAAACTCTTATATGT+AGG + chr8_2:4484217-4484236 Msa1228870:intron 25.0%
! AGTTCAAACTCTTATATGTA+GGG + chr8_2:4484218-4484237 Msa1228870:intron 25.0%
! ACAATACACCAGATTATATT+TGG - chr8_2:4484381-4484400 None:intergenic 25.0%
!! GTATTGTTGTATTTCTTTTC+AGG + chr8_2:4484394-4484413 Msa1228870:intron 25.0%
! CTTAGTTGTATATTAATCTC+AGG + chr8_2:4484475-4484494 Msa1228870:intron 25.0%
! ACAAATTAACTGATGAAACT+AGG - chr8_2:4484820-4484839 None:intergenic 25.0%
!!! GTTAATTTGTTCATTTACTC+AGG + chr8_2:4484830-4484849 Msa1228870:intron 25.0%
! TTAGTAAGGTACAATCTTAA+AGG - chr8_2:4485429-4485448 None:intergenic 25.0%
! GTTAGCTATTTATCTATCTA+TGG + chr8_2:4485779-4485798 Msa1228870:intron 25.0%
!! CTGAACCATATCTAAAATAA+TGG - chr8_2:4485858-4485877 None:intergenic 25.0%
!!! CATTATTTTAGATATGGTTC+AGG + chr8_2:4485856-4485875 Msa1228870:intron 25.0%
! AAACTTCATAAAAGCTAAAC+TGG + chr8_2:4486155-4486174 Msa1228870:intron 25.0%
!!! TCTTTCTATAAATTGGTCTT+TGG + chr8_2:4486247-4486266 Msa1228870:intron 25.0%
!! TTTTCTTTGAACGACAATAA+AGG - chr8_2:4486279-4486298 None:intergenic 25.0%
!! CTTTAAACGATACATTTTGA+AGG - chr8_2:4486349-4486368 None:intergenic 25.0%
! TAAAGACATCCATTAATTGT+AGG - chr8_2:4486399-4486418 None:intergenic 25.0%
!!! AAGTTGATTTTTTACTGTTC+TGG - chr8_2:4486565-4486584 None:intergenic 25.0%
! TAAAAGAAATTGCCAAATTG+CGG + chr8_2:4486649-4486668 Msa1228870:CDS 25.0%
! AAAAAAAAGGAATTTACCAC+TGG - chr8_2:4486729-4486748 None:intergenic 25.0%
!!! TTTTTTTTTTTTGGCAACTC+TGG + chr8_2:4486743-4486762 Msa1228870:intron 25.0%
! GTTCTATCATAAACCATATT+TGG - chr8_2:4486924-4486943 None:intergenic 25.0%
! TGGTTTATGATAGAACATTA+TGG + chr8_2:4486928-4486947 Msa1228870:intron 25.0%
! AACTTAAAATGGTTATCCAA+GGG - chr8_2:4487121-4487140 None:intergenic 25.0%
! AAACTTAAAATGGTTATCCA+AGG - chr8_2:4487122-4487141 None:intergenic 25.0%
!! TTAATTTTGTGATTATGAGC+TGG - chr8_2:4487150-4487169 None:intergenic 25.0%
! ACAATAATAGAATCAACCAA+GGG - chr8_2:4487266-4487285 None:intergenic 25.0%
! AACAATAATAGAATCAACCA+AGG - chr8_2:4487267-4487286 None:intergenic 25.0%
!! TTCTATTGTTGATTGCAAAT+GGG - chr8_2:4487338-4487357 None:intergenic 25.0%
!! TTTCTATTGTTGATTGCAAA+TGG - chr8_2:4487339-4487358 None:intergenic 25.0%
TAGAAATCCGTTACTGTTAA+CGG - chr8_2:4480283-4480302 None:intergenic 30.0%
!! TAATTTTGTGTGTGTTTTGG+TGG + chr8_2:4480462-4480481 Msa1228870:intron 30.0%
!! ATTTGAGATTTTGGTGAAAC+AGG + chr8_2:4480492-4480511 Msa1228870:intron 30.0%
! AGTTCCAGAAATTTTCGTTA+AGG + chr8_2:4480551-4480570 Msa1228870:CDS 30.0%
TATTATGCACGTAGAATCAT+AGG + chr8_2:4480906-4480925 Msa1228870:intron 30.0%
ACTAAATCGCATACCAATAA+TGG - chr8_2:4481023-4481042 None:intergenic 30.0%
GATTCATAACACTGTTTGAT+TGG + chr8_2:4481133-4481152 Msa1228870:intron 30.0%
GTTGTATTTCATGCTGAATT+TGG + chr8_2:4481376-4481395 Msa1228870:intron 30.0%
CCAATTGAATCAATACGTAT+AGG - chr8_2:4481531-4481550 None:intergenic 30.0%
!! CCTATACGTATTGATTCAAT+TGG + chr8_2:4481528-4481547 Msa1228870:CDS 30.0%
AGAACCGAATTTCAAATACA+GGG + chr8_2:4481569-4481588 Msa1228870:CDS 30.0%
ACTAATGAAGAAACTCTCAT+TGG - chr8_2:4481658-4481677 None:intergenic 30.0%
CATTACACAAAGATTGATCT+TGG - chr8_2:4481764-4481783 None:intergenic 30.0%
! TTGTGTAATGATGATGTTGT+TGG + chr8_2:4481774-4481793 Msa1228870:CDS 30.0%
! AATGATGATGTTGTTGGTAT+TGG + chr8_2:4481780-4481799 Msa1228870:CDS 30.0%
TAATTAACCAATCCTTCCTT+TGG - chr8_2:4481963-4481982 None:intergenic 30.0%
TTATGAGAATGATAGAGAGA+TGG + chr8_2:4481980-4481999 Msa1228870:CDS 30.0%
!!! AGATGTTTTGGAATTGGAAA+AGG + chr8_2:4482052-4482071 Msa1228870:CDS 30.0%
!!! GATGTTTTGGAATTGGAAAA+GGG + chr8_2:4482053-4482072 Msa1228870:CDS 30.0%
CTATGACAAAAATGAAGAGA+TGG + chr8_2:4482139-4482158 Msa1228870:CDS 30.0%
AAACAAGACAGTGAGAAAAA+TGG + chr8_2:4482259-4482278 Msa1228870:CDS 30.0%
!! AGCTATTTTATTTGTAGACC+GGG - chr8_2:4482288-4482307 None:intergenic 30.0%
!! GAGCTATTTTATTTGTAGAC+CGG - chr8_2:4482289-4482308 None:intergenic 30.0%
AACATTATTGAAGGTGATGA+AGG + chr8_2:4482467-4482486 Msa1228870:CDS 30.0%
! AGCTACTTTATTGTTAGACT+GGG - chr8_2:4482513-4482532 None:intergenic 30.0%
AGATAACTTCATGACTTCTA+AGG + chr8_2:4482745-4482764 Msa1228870:CDS 30.0%
TCACATGTATAATACATCTC+AGG - chr8_2:4482841-4482860 None:intergenic 30.0%
! ACATGTGATGTTATCCATTT+TGG + chr8_2:4482853-4482872 Msa1228870:intron 30.0%
!!! AGGGATTTGTTTTATCAGTT+TGG - chr8_2:4482991-4483010 None:intergenic 30.0%
GATATTTCTTTAGGTGGTTA+TGG + chr8_2:4483025-4483044 Msa1228870:intron 30.0%
TTCCAGTAGAGTACAAATAA+AGG - chr8_2:4483193-4483212 None:intergenic 30.0%
! GTAACAGTGTTGTTAAATAG+TGG + chr8_2:4483301-4483320 Msa1228870:intron 30.0%
TTGTTAAATAGTGGCTATAG+CGG + chr8_2:4483310-4483329 Msa1228870:intron 30.0%
TTGTACTAAATAGCGTATCA+AGG - chr8_2:4483383-4483402 None:intergenic 30.0%
ATCTGCAATTGACAACATTT+CGG + chr8_2:4483481-4483500 Msa1228870:intron 30.0%
!! TTTTTATGAGCATTGCTATG+AGG - chr8_2:4483567-4483586 None:intergenic 30.0%
TATTCCGCTCATTATTTACA+TGG - chr8_2:4483590-4483609 None:intergenic 30.0%
CCTGAATCATGAAAAGTTAA+AGG - chr8_2:4483688-4483707 None:intergenic 30.0%
!! CCTTTAACTTTTCATGATTC+AGG + chr8_2:4483685-4483704 Msa1228870:intron 30.0%
TTTGAAGGTTCTTTCAAAAG+TGG + chr8_2:4483729-4483748 Msa1228870:CDS 30.0%
AATTACAGACAATTTACCTC+AGG - chr8_2:4483798-4483817 None:intergenic 30.0%
!!! ACAGTTATTTTTTCACACGA+AGG - chr8_2:4483829-4483848 None:intergenic 30.0%
!!! GCTTCTCAATTTTTAGTTTC+TGG + chr8_2:4483955-4483974 Msa1228870:intron 30.0%
ATGAAAATACCACAATGTGT+AGG + chr8_2:4484047-4484066 Msa1228870:intron 30.0%
! TTTTCAAAACCTACACATTG+TGG - chr8_2:4484059-4484078 None:intergenic 30.0%
TTGATATATGTGAGCTTCAA+TGG + chr8_2:4484085-4484104 Msa1228870:CDS 30.0%
AGTAACAGAGAATAAGCAAA+GGG - chr8_2:4484164-4484183 None:intergenic 30.0%
AAGTAACAGAGAATAAGCAA+AGG - chr8_2:4484165-4484184 None:intergenic 30.0%
CCAAATAGGTTAGAATTATG+AGG - chr8_2:4484452-4484471 None:intergenic 30.0%
CCTCATAATTCTAACCTATT+TGG + chr8_2:4484449-4484468 Msa1228870:intron 30.0%
ATACAACTAAGTAGCCAAAT+AGG - chr8_2:4484466-4484485 None:intergenic 30.0%
!!! TTTTTTTCTGGGAGGATATT+AGG - chr8_2:4484508-4484527 None:intergenic 30.0%
AAACTTAGCAAAGTGAACTA+AGG - chr8_2:4484573-4484592 None:intergenic 30.0%
! GAAATGGATTTCACATAAAG+TGG - chr8_2:4484689-4484708 None:intergenic 30.0%
TGAAATTCGTAAGCATATGA+AGG + chr8_2:4485003-4485022 Msa1228870:CDS 30.0%
AATGCCTATACATTCATCTA+CGG + chr8_2:4485327-4485346 Msa1228870:CDS 30.0%
TAACACAATAGCAGTTAGTA+AGG - chr8_2:4485443-4485462 None:intergenic 30.0%
! TAACTGCTATTGTGTTATTC+AGG + chr8_2:4485446-4485465 Msa1228870:intron 30.0%
! AACTGCTATTGTGTTATTCA+GGG + chr8_2:4485447-4485466 Msa1228870:intron 30.0%
!! TCAGTACTGAATTTTTGATG+CGG - chr8_2:4485625-4485644 None:intergenic 30.0%
AGAATTTCCAATGGTTATGT+TGG - chr8_2:4485695-4485714 None:intergenic 30.0%
!!! TATTGATTTCTTTTTCGGCA+CGG - chr8_2:4485750-4485769 None:intergenic 30.0%
!! TATTTTAGATATGGTTCAGG+TGG + chr8_2:4485859-4485878 Msa1228870:intron 30.0%
! ATTTTAGATATGGTTCAGGT+GGG + chr8_2:4485860-4485879 Msa1228870:intron 30.0%
AGATTGTGTTTGATTGGAAA+GGG - chr8_2:4485953-4485972 None:intergenic 30.0%
!!! TATATTGTTTCCCCCTTTTT+TGG + chr8_2:4486016-4486035 Msa1228870:intron 30.0%
!!! ATATTGTTTCCCCCTTTTTT+GGG + chr8_2:4486017-4486036 Msa1228870:intron 30.0%
AAAACAAAACGCCCAAAAAA+GGG - chr8_2:4486031-4486050 None:intergenic 30.0%
!! TTTTAACTGACCTTCATCTT+GGG + chr8_2:4486056-4486075 Msa1228870:intron 30.0%
!! TTCTATAAATTGGTCTTTGG+CGG + chr8_2:4486250-4486269 Msa1228870:intron 30.0%
AATCACCTTCCTACAATTAA+TGG + chr8_2:4486387-4486406 Msa1228870:intron 30.0%
AAAAGAAATTGCCAAATTGC+GGG + chr8_2:4486650-4486669 Msa1228870:CDS 30.0%
!!! AGAACGTTTTAATTCACTCA+AGG - chr8_2:4486867-4486886 None:intergenic 30.0%
CTCAAATATGGTTCCAAATA+TGG + chr8_2:4486908-4486927 Msa1228870:intron 30.0%
! GAATTCTTTTACTAGTGTTC+TGG + chr8_2:4487079-4487098 Msa1228870:intron 30.0%
! ATTTTTCACAATACATCCCT+TGG + chr8_2:4487102-4487121 Msa1228870:intron 30.0%
GCTGGACTTAAAACTTAAAA+TGG - chr8_2:4487132-4487151 None:intergenic 30.0%
CTATTATTGTTTGAAGATGG+CGG + chr8_2:4487276-4487295 Msa1228870:intron 30.0%
AAATAACTCCTGTAATCCAA+AGG - chr8_2:4487463-4487482 None:intergenic 30.0%
TGTCATATGATTGCAAGTAT+CGG - chr8_2:4487491-4487510 None:intergenic 30.0%
AATCATATGACATAGAAACC+TGG + chr8_2:4487499-4487518 Msa1228870:CDS 30.0%
ATATCAGTTTCATGAACTGT+AGG + chr8_2:4487743-4487762 Msa1228870:exon 30.0%
! AGAAAGAGAAGTGTGGAAAT+GGG - chr8_2:4480030-4480049 None:intergenic 35.0%
AAATGAGAAAAACCTAGCCA+TGG - chr8_2:4480331-4480350 None:intergenic 35.0%
! AGTGAAACGGAGTTGAATTT+TGG - chr8_2:4480359-4480378 None:intergenic 35.0%
!! AGCAAATTGACTTGCGTTTA+CGG - chr8_2:4480383-4480402 None:intergenic 35.0%
! TCAATTTGCTCAATCACTCA+AGG + chr8_2:4480393-4480412 Msa1228870:CDS 35.0%
! CACGTAGAATCATAGGATTT+TGG + chr8_2:4480913-4480932 Msa1228870:intron 35.0%
AGACTTACAGTGACTCTATA+GGG + chr8_2:4480990-4481009 Msa1228870:intron 35.0%
ATAGGGTAACCAACCATTAT+TGG + chr8_2:4481007-4481026 Msa1228870:intron 35.0%
AATCGCATACCAATAATGGT+TGG - chr8_2:4481019-4481038 None:intergenic 35.0%
!! TCCAAAGTGTTGTCAGATAA+TGG + chr8_2:4481042-4481061 Msa1228870:intron 35.0%
! TCAGATAATGGCTATAGTGT+AGG + chr8_2:4481054-4481073 Msa1228870:intron 35.0%
TCAAACAGTGTTATGAATCG+TGG - chr8_2:4481132-4481151 None:intergenic 35.0%
CTGTCACTGTAACATATCAA+AGG - chr8_2:4481170-4481189 None:intergenic 35.0%
GATATGTTACAGTGACAGTA+AGG + chr8_2:4481172-4481191 Msa1228870:intron 35.0%
CAATGATGAGTCCAACTAAA+TGG - chr8_2:4481259-4481278 None:intergenic 35.0%
GTGCAATGAAATTTGAGTCT+CGG + chr8_2:4481478-4481497 Msa1228870:CDS 35.0%
TTTGAGTCTCGGATTGTAAA+TGG + chr8_2:4481489-4481508 Msa1228870:CDS 35.0%
GATTCAATTGGAGAATGTTC+AGG + chr8_2:4481540-4481559 Msa1228870:CDS 35.0%
CAGAACCGAATTTCAAATAC+AGG + chr8_2:4481568-4481587 Msa1228870:CDS 35.0%
! GCTTCCCTGTATTTGAAATT+CGG - chr8_2:4481576-4481595 None:intergenic 35.0%
TATTGGATCAGAGGACAAAA+TGG + chr8_2:4481797-4481816 Msa1228870:CDS 35.0%
! ATGGATTGCTTTGACTCATT+TGG + chr8_2:4481816-4481835 Msa1228870:CDS 35.0%
TGGATTGCTTTGACTCATTT+GGG + chr8_2:4481817-4481836 Msa1228870:CDS 35.0%
TCCAATTCCAAAACATCTGT+CGG - chr8_2:4482050-4482069 None:intergenic 35.0%
TAAAGAGGAAAGAGGTTTGA+AGG + chr8_2:4482103-4482122 Msa1228870:CDS 35.0%
! AGAAGAGCCAACAAAAGTTT+TGG + chr8_2:4482199-4482218 Msa1228870:CDS 35.0%
TATTGAAGGTGATGAAGGTA+AGG + chr8_2:4482472-4482491 Msa1228870:CDS 35.0%
! GAGCTACTTTATTGTTAGAC+TGG - chr8_2:4482514-4482533 None:intergenic 35.0%
! TGCGTTGATATTTCTTTAGG+TGG + chr8_2:4483019-4483038 Msa1228870:intron 35.0%
! TTTTCTTCGCATAACACTTC+AGG - chr8_2:4483147-4483166 None:intergenic 35.0%
! GAAGTGTTATGCGAAGAAAA+CGG + chr8_2:4483147-4483166 Msa1228870:intron 35.0%
GAAGAAAACGGAAAGGAATA+GGG + chr8_2:4483159-4483178 Msa1228870:intron 35.0%
! GTCCTTTATTTGTACTCTAC+TGG + chr8_2:4483188-4483207 Msa1228870:intron 35.0%
CAAATTCTGCTACGAAATAG+CGG - chr8_2:4483343-4483362 None:intergenic 35.0%
!! TGGGAAATGGATTTACCTTT+TGG + chr8_2:4483997-4484016 Msa1228870:intron 35.0%
TACAGTAAAGAATGGCCAAA+AGG - chr8_2:4484015-4484034 None:intergenic 35.0%
ATATGTGAGCTTCAATGGTA+TGG + chr8_2:4484090-4484109 Msa1228870:CDS 35.0%
TATGTGAGCTTCAATGGTAT+GGG + chr8_2:4484091-4484110 Msa1228870:CDS 35.0%
!! TCTTTAGCTTTCGAGAGAAA+AGG - chr8_2:4484277-4484296 None:intergenic 35.0%
TTCTCTCGAAAGCTAAAGAA+AGG + chr8_2:4484278-4484297 Msa1228870:CDS 35.0%
! TTGAAGCAGAAGTACAACAT+CGG + chr8_2:4484419-4484438 Msa1228870:CDS 35.0%
!!! TGTGTTTCTTTTTTTCTGGG+AGG - chr8_2:4484516-4484535 None:intergenic 35.0%
AATGCGTTTAGAGAAATGCT+AGG + chr8_2:4484598-4484617 Msa1228870:intron 35.0%
! CAATAAGAGATGGAGTGTTA+GGG - chr8_2:4484644-4484663 None:intergenic 35.0%
CTAACACTCCATCTCTTATT+GGG + chr8_2:4484643-4484662 Msa1228870:intron 35.0%
CTAACACTCGCTTTCTTATT+TGG - chr8_2:4484739-4484758 None:intergenic 35.0%
AATTTATGATGACCGCATTG+AGG - chr8_2:4484783-4484802 None:intergenic 35.0%
ACTCAGGTAAATCAAAACCA+AGG + chr8_2:4484846-4484865 Msa1228870:intron 35.0%
! ATCTGGCAATTCCCTTTTAT+TGG - chr8_2:4484960-4484979 None:intergenic 35.0%
TAAGCATATGAAGGCAAAAG+CGG + chr8_2:4485012-4485031 Msa1228870:CDS 35.0%
TCTGAAAAATTGTCCCGATA+AGG + chr8_2:4485045-4485064 Msa1228870:CDS 35.0%
! TAAATTCGCAACAGCCTTAT+CGG - chr8_2:4485062-4485081 None:intergenic 35.0%
! TTTCTTCCTTTGAAGGGTAT+GGG - chr8_2:4485175-4485194 None:intergenic 35.0%
GTAGATGAATGTATAGGCAT+TGG - chr8_2:4485328-4485347 None:intergenic 35.0%
TTGGGGTTATTAAGAAGCAA+AGG + chr8_2:4485355-4485374 Msa1228870:CDS 35.0%
! ACTGCTATTGTGTTATTCAG+GGG + chr8_2:4485448-4485467 Msa1228870:intron 35.0%
GACGGAAAACATAAAAGAGA+GGG + chr8_2:4485470-4485489 Msa1228870:CDS 35.0%
! TCAGTACTGAATACTGACAT+AGG + chr8_2:4485635-4485654 Msa1228870:intron 35.0%
! AAAGCATCCAACATAACCAT+TGG + chr8_2:4485685-4485704 Msa1228870:intron 35.0%
! AGTTAGTTTCGTGATTGTAG+TGG + chr8_2:4485822-4485841 Msa1228870:intron 35.0%
! GTTAGTTTCGTGATTGTAGT+GGG + chr8_2:4485823-4485842 Msa1228870:intron 35.0%
! TTTTAGATATGGTTCAGGTG+GGG + chr8_2:4485861-4485880 Msa1228870:intron 35.0%
CAGATTGTGTTTGATTGGAA+AGG - chr8_2:4485954-4485973 None:intergenic 35.0%
CTGTACAGATTGTGTTTGAT+TGG - chr8_2:4485959-4485978 None:intergenic 35.0%
AATATACCAGGTCAGTTATC+TGG - chr8_2:4486002-4486021 None:intergenic 35.0%
AAACAAAACGCCCAAAAAAG+GGG - chr8_2:4486030-4486049 None:intergenic 35.0%
GAAAACAAAACGCCCAAAAA+AGG - chr8_2:4486032-4486051 None:intergenic 35.0%
GATGAAGGTCAGTTAAAACT+TGG - chr8_2:4486054-4486073 None:intergenic 35.0%
!!! GTTTTAACTGACCTTCATCT+TGG + chr8_2:4486055-4486074 Msa1228870:intron 35.0%
GAAAGGGGATATTCATTGTA+TGG + chr8_2:4486086-4486105 Msa1228870:intron 35.0%
GACATCCATTAATTGTAGGA+AGG - chr8_2:4486395-4486414 None:intergenic 35.0%
!! CACGGTTTCATTTTTCCTTT+AGG + chr8_2:4486438-4486457 Msa1228870:intron 35.0%
GAGATCTGAACAAAACCTAA+AGG - chr8_2:4486456-4486475 None:intergenic 35.0%
TTTGTTCAGATCTCAGTTTC+AGG + chr8_2:4486462-4486481 Msa1228870:CDS 35.0%
TTGTTCAGATCTCAGTTTCA+GGG + chr8_2:4486463-4486482 Msa1228870:CDS 35.0%
ACTCTACTATACATGCTGAT+TGG + chr8_2:4486517-4486536 Msa1228870:CDS 35.0%
! CTCTACTATACATGCTGATT+GGG + chr8_2:4486518-4486537 Msa1228870:CDS 35.0%
AAAGAAATTGCCAAATTGCG+GGG + chr8_2:4486651-4486670 Msa1228870:CDS 35.0%
AAAGGAATTTACCACTGGAA+AGG - chr8_2:4486724-4486743 None:intergenic 35.0%
ACTAGAAAAAAATGGTCCCT+TGG + chr8_2:4487247-4487266 Msa1228870:intron 35.0%
! GGGATTTTATCAACAAACTC+TGG - chr8_2:4487546-4487565 None:intergenic 35.0%
TATTCCTTGGGTTTACTGTT+AGG - chr8_2:4487599-4487618 None:intergenic 35.0%
TAACAGTAAACCCAAGGAAT+AGG + chr8_2:4487598-4487617 Msa1228870:CDS 35.0%
CAACACTAATCCTATTCCTT+GGG - chr8_2:4487611-4487630 None:intergenic 35.0%
TCAACACTAATCCTATTCCT+TGG - chr8_2:4487612-4487631 None:intergenic 35.0%
! TTAGTGTTGAAGATGTTCTC+AGG + chr8_2:4487622-4487641 Msa1228870:CDS 35.0%
ATGAGATCATGAGAAAGACA+AGG + chr8_2:4487667-4487686 Msa1228870:CDS 35.0%
AATACTGTTTGACCTGAAGA+GGG + chr8_2:4487777-4487796 Msa1228870:three_prime_UTR 35.0%
!!! ATTTTTTGTAGACCCTCTTC+AGG - chr8_2:4487792-4487811 None:intergenic 35.0%
! GAGAAAGAGAAGTGTGGAAA+TGG - chr8_2:4480031-4480050 None:intergenic 40.0%
!! GCAAATTGACTTGCGTTTAC+GGG - chr8_2:4480382-4480401 None:intergenic 40.0%
!! TGAGATTTTGGTGAAACAGG+TGG + chr8_2:4480495-4480514 Msa1228870:intron 40.0%
!! GTAGTGGAATCACACTGTTT+TGG + chr8_2:4480680-4480699 Msa1228870:intron 40.0%
TGTCACTGTCACAGTATCAA+AGG - chr8_2:4480813-4480832 None:intergenic 40.0%
CAGACTTACAGTGACTCTAT+AGG + chr8_2:4480989-4481008 Msa1228870:intron 40.0%
GCCATTATCTGACAACACTT+TGG - chr8_2:4481046-4481065 None:intergenic 40.0%
! TTTTGCTGATACTACTGCAG+AGG + chr8_2:4481434-4481453 Msa1228870:CDS 40.0%
AGTCTCGGATTGTAAATGGT+GGG + chr8_2:4481493-4481512 Msa1228870:CDS 40.0%
! TACAGGGAAGCTGATAATGA+CGG + chr8_2:4481585-4481604 Msa1228870:CDS 40.0%
TAATGACGGCATAACAAGCA+TGG + chr8_2:4481599-4481618 Msa1228870:CDS 40.0%
ATGGTCAAAGGAGAGATATC+TGG + chr8_2:4481618-4481637 Msa1228870:CDS 40.0%
TCATTAGTGAAAGTGACTCG+AGG + chr8_2:4481670-4481689 Msa1228870:CDS 40.0%
GATTGATCTTGGACACTAGT+TGG - chr8_2:4481753-4481772 None:intergenic 40.0%
! TGTTGTTGGTATTGGATCAG+AGG + chr8_2:4481788-4481807 Msa1228870:CDS 40.0%
!! GTAGGGGTTATGTTTTGTTC+AGG - chr8_2:4481852-4481871 None:intergenic 40.0%
ACAAAACATAACCCCTACTG+TGG + chr8_2:4481854-4481873 Msa1228870:CDS 40.0%
AGAAGAGAAAAGAGGTCCAA+AGG + chr8_2:4481944-4481963 Msa1228870:CDS 40.0%
AGATGGAAGATGTTGCTCAA+AGG + chr8_2:4481997-4482016 Msa1228870:CDS 40.0%
GATGGAAGATGTTGCTCAAA+GGG + chr8_2:4481998-4482017 Msa1228870:CDS 40.0%
! AGAAGATCCGACAGATGTTT+TGG + chr8_2:4482040-4482059 Msa1228870:CDS 40.0%
!!! TCCGACAGATGTTTTGGAAT+TGG + chr8_2:4482046-4482065 Msa1228870:CDS 40.0%
TTCTCCACATACTACAGGAT+TGG - chr8_2:4482183-4482202 None:intergenic 40.0%
GGGCATGCATGTATTAGATT+TGG + chr8_2:4482232-4482251 Msa1228870:CDS 40.0%
! AAGCTGCTTTGGATTTGAAG+AGG - chr8_2:4482315-4482334 None:intergenic 40.0%
AAACCTTCTCGCACATTGAA+GGG + chr8_2:4482338-4482357 Msa1228870:CDS 40.0%
!! AGTGACTCGGTTAGAATTTG+AGG - chr8_2:4482392-4482411 None:intergenic 40.0%
TTTGTTACAGGCTAGTGACT+CGG - chr8_2:4482405-4482424 None:intergenic 40.0%
TGAAGGTAAGGATCAGAACA+TGG + chr8_2:4482484-4482503 Msa1228870:CDS 40.0%
! AGCTGCTTTGGATTTGAAGA+GGG - chr8_2:4482314-4482333 None:intergenic 40.0%
! AAGCTGCTTTGGATTTGAAG+AGG - chr8_2:4482315-4482334 None:intergenic 40.0%
GAAGATTTCAGAAGCTGCTT+TGG - chr8_2:4482551-4482570 None:intergenic 40.0%
GAAATCTTCTCGCATGTTGA+AGG + chr8_2:4482562-4482581 Msa1228870:CDS 40.0%
ATAGAGGAAGAAGAAGGTTC+AGG + chr8_2:4482932-4482951 Msa1228870:CDS 40.0%
CATCAGTTGTTCTATGAGCA+CGG - chr8_2:4483060-4483079 None:intergenic 40.0%
GTTATGCGAAGAAAACGGAA+AGG + chr8_2:4483152-4483171 Msa1228870:intron 40.0%
CGAAGAAAACGGAAAGGAAT+AGG + chr8_2:4483158-4483177 Msa1228870:intron 40.0%
GGAAAAAGGATGCAAGTAAC+TGG - chr8_2:4483245-4483264 None:intergenic 40.0%
! GGAATATGCTTGAGCGTTTT+GGG + chr8_2:4483604-4483623 Msa1228870:CDS 40.0%
ATGAACTCGAGAGAAAGGAT+GGG - chr8_2:4483915-4483934 None:intergenic 40.0%
CATAGATGAACTCGAGAGAA+AGG - chr8_2:4483920-4483939 None:intergenic 40.0%
! GTATGGGTTTTGCATGTTCA+AGG + chr8_2:4484107-4484126 Msa1228870:CDS 40.0%
GTTCACAGAGATGTTAAACC+TGG + chr8_2:4484245-4484264 Msa1228870:CDS 40.0%
! CCAATAAGAGATGGAGTGTT+AGG - chr8_2:4484645-4484664 None:intergenic 40.0%
CCTAACACTCCATCTCTTAT+TGG + chr8_2:4484642-4484661 Msa1228870:intron 40.0%
TTATTGGGTGAAACCCATGT+GGG + chr8_2:4484658-4484677 Msa1228870:intron 40.0%
! TTATTTGGTGAGACCCATGT+GGG - chr8_2:4484724-4484743 None:intergenic 40.0%
TTCCTCCAAGATTCTTGTCT+TGG - chr8_2:4484922-4484941 None:intergenic 40.0%
CAAGAATCTTGGAGGAATCA+AGG + chr8_2:4484925-4484944 Msa1228870:CDS 40.0%
TAAAAGGGAATTGCCAGATC+TGG + chr8_2:4484961-4484980 Msa1228870:CDS 40.0%
! AAATTCGCAACAGCCTTATC+GGG - chr8_2:4485061-4485080 None:intergenic 40.0%
CTTAGTGCTAGTAACATCTC+TGG - chr8_2:4485125-4485144 None:intergenic 40.0%
! CTTTCTTCCTTTGAAGGGTA+TGG - chr8_2:4485176-4485195 None:intergenic 40.0%
CATACCCTTCAAAGGAAGAA+AGG + chr8_2:4485174-4485193 Msa1228870:CDS 40.0%
AGCTCCTTTCTTCCTTTGAA+GGG - chr8_2:4485181-4485200 None:intergenic 40.0%
AAGCTCCTTTCTTCCTTTGA+AGG - chr8_2:4485182-4485201 None:intergenic 40.0%
ATTGCATAGAATTCTGCACG+AGG - chr8_2:4485210-4485229 None:intergenic 40.0%
TGAAAAGTCCTTCTTCTCAG+AGG + chr8_2:4485248-4485267 Msa1228870:CDS 40.0%
TCCTTCTTCTCAGAGGAAAA+GGG + chr8_2:4485255-4485274 Msa1228870:CDS 40.0%
GCAACCGTAGATGAATGTAT+AGG - chr8_2:4485334-4485353 None:intergenic 40.0%
ACATTCATCTACGGTTGCTT+TGG + chr8_2:4485336-4485355 Msa1228870:CDS 40.0%
! CATTCATCTACGGTTGCTTT+GGG + chr8_2:4485337-4485356 Msa1228870:CDS 40.0%
! ATTCATCTACGGTTGCTTTG+GGG + chr8_2:4485338-4485357 Msa1228870:CDS 40.0%
! AGCTTCTGAATTCTGAAGAG+TGG + chr8_2:4485395-4485414 Msa1228870:intron 40.0%
! CTATTGTGTTATTCAGGGGA+CGG + chr8_2:4485452-4485471 Msa1228870:intron 40.0%
GGACGGAAAACATAAAAGAG+AGG + chr8_2:4485469-4485488 Msa1228870:CDS 40.0%
AAACCCTTTGTTCCAACACA+TGG - chr8_2:4485497-4485516 None:intergenic 40.0%
TAAGCGCAAGAATTTACCTC+CGG - chr8_2:4485527-4485546 None:intergenic 40.0%
CAGCACTGTAGAATTTCCAA+TGG - chr8_2:4485704-4485723 None:intergenic 40.0%
TTGGAAATTCTACAGTGCTG+TGG + chr8_2:4485704-4485723 Msa1228870:intron 40.0%
TTTAGATATGGTTCAGGTGG+GGG + chr8_2:4485862-4485881 Msa1228870:intron 40.0%
AATTGTAGTTTCCTGCTGAC+TGG + chr8_2:4485890-4485909 Msa1228870:intron 40.0%
ATATCTCCAGATAACTGACC+TGG + chr8_2:4485993-4486012 Msa1228870:intron 40.0%
AAAGGGGGAAACAATATACC+AGG - chr8_2:4486014-4486033 None:intergenic 40.0%
AACAAAACGCCCAAAAAAGG+GGG - chr8_2:4486029-4486048 None:intergenic 40.0%
ACCTGTGTTCATTATTGAGC+TGG + chr8_2:4486310-4486329 Msa1228870:intron 40.0%
TCCAGCTCAATAATGAACAC+AGG - chr8_2:4486314-4486333 None:intergenic 40.0%
CCGACCAAATATCAACCTTA+GGG - chr8_2:4486489-4486508 None:intergenic 40.0%
!! CCCTAAGGTTGATATTTGGT+CGG + chr8_2:4486486-4486505 Msa1228870:CDS 40.0%
ATTGGGAAAACTTCTTTCCC+TGG + chr8_2:4486535-4486554 Msa1228870:CDS 40.0%
AAAACATAGTCAGCACGGAA+AGG - chr8_2:4486617-4486636 None:intergenic 40.0%
!!! TTTCCGTGCTGACTATGTTT+TGG + chr8_2:4486616-4486635 Msa1228870:intron 40.0%
AAGCATTATCCCACTAAGTG+GGG - chr8_2:4486977-4486996 None:intergenic 40.0%
CAAGCATTATCCCACTAAGT+GGG - chr8_2:4486978-4486997 None:intergenic 40.0%
!! GCAGCTCTTATTTCTGAACA+AGG + chr8_2:4487415-4487434 Msa1228870:intron 40.0%
AAGCTAATGTTTGCCTCCTT+TGG + chr8_2:4487444-4487463 Msa1228870:intron 40.0%
TAACTCCTGTAATCCAAAGG+AGG - chr8_2:4487460-4487479 None:intergenic 40.0%
TCTCATGATCTCATTACACG+AGG - chr8_2:4487661-4487680 None:intergenic 40.0%
CAATACTGTTTGACCTGAAG+AGG + chr8_2:4487776-4487795 Msa1228870:three_prime_UTR 40.0%
ACGACTAATTGCAGAGAAAC+TGG + chr8_2:4487841-4487860 Msa1228870:three_prime_UTR 40.0%
CTGGCACATAATGTAAACTG+TGG + chr8_2:4487860-4487879 Msa1228870:three_prime_UTR 40.0%
CTAGCTGAAATCACAGGTTA+TGG - chr8_2:4487961-4487980 None:intergenic 40.0%
TTGCAACTAGCTGAAATCAC+AGG - chr8_2:4487967-4487986 None:intergenic 40.0%
AGAGTGAAAAGGAGTAGGAG+CGG - chr8_2:4479992-4480011 None:intergenic 45.0%
GAGAGAGAGTGAAAAGGAGT+AGG - chr8_2:4479997-4480016 None:intergenic 45.0%
GGATGAGAGAGAGAGTGAAA+AGG - chr8_2:4480003-4480022 None:intergenic 45.0%
! AGAAGTGTGGAAATGGGAAG+AGG - chr8_2:4480024-4480043 None:intergenic 45.0%
GAGAGAGAGAAAGAGAAGTG+TGG - chr8_2:4480037-4480056 None:intergenic 45.0%
TTAACGGAGAGAGGAGAATC+AGG - chr8_2:4480267-4480286 None:intergenic 45.0%
CCTCTCTCCGTTAACAGTAA+CGG + chr8_2:4480273-4480292 Msa1228870:CDS 45.0%
TTGCGTTTACGGGAGTGAAA+CGG - chr8_2:4480372-4480391 None:intergenic 45.0%
TCACCAATTGCAAGCCGTTT+CGG - chr8_2:4480528-4480547 None:intergenic 45.0%
TCGTGGTGCACAAAAAACAG+CGG - chr8_2:4481115-4481134 None:intergenic 45.0%
GAGTCTCGGATTGTAAATGG+TGG + chr8_2:4481492-4481511 Msa1228870:CDS 45.0%
GGCATAACAAGCATGGTCAA+AGG + chr8_2:4481606-4481625 Msa1228870:CDS 45.0%
GAGGGTCTAGATAGATTCGT+GGG + chr8_2:4481699-4481718 Msa1228870:CDS 45.0%
GGTGGAGCAAGATTAGCAAA+GGG - chr8_2:4481732-4481751 None:intergenic 45.0%
TGGTGGAGCAAGATTAGCAA+AGG - chr8_2:4481733-4481752 None:intergenic 45.0%
TGATCTTGGACACTAGTTGG+TGG - chr8_2:4481750-4481769 None:intergenic 45.0%
AACATAACCCCTACTGTGGA+TGG + chr8_2:4481858-4481877 Msa1228870:CDS 45.0%
! CTTTTCACCATCCACAGTAG+GGG - chr8_2:4481868-4481887 None:intergenic 45.0%
! CCTTTTCACCATCCACAGTA+GGG - chr8_2:4481869-4481888 None:intergenic 45.0%
! ACCTTTTCACCATCCACAGT+AGG - chr8_2:4481870-4481889 None:intergenic 45.0%
GAGAAAAGAGGTCCAAAGGA+AGG + chr8_2:4481948-4481967 Msa1228870:CDS 45.0%
AAGAGGTCCAAAGGAAGGAT+TGG + chr8_2:4481953-4481972 Msa1228870:CDS 45.0%
GAGGAAAGAGGTTTGAAGGA+AGG + chr8_2:4482107-4482126 Msa1228870:CDS 45.0%
AGATGGAAGATGTTGCTCTG+AGG + chr8_2:4482156-4482175 Msa1228870:CDS 45.0%
GATGGAAGATGTTGCTCTGA+GGG + chr8_2:4482157-4482176 Msa1228870:CDS 45.0%
CAGTGAGAAAAATGGTGACC+CGG + chr8_2:4482267-4482286 Msa1228870:CDS 45.0%
GAAGGTTTCAGAAGCTGCTT+TGG - chr8_2:4482326-4482345 None:intergenic 45.0%
GAAACCTTCTCGCACATTGA+AGG + chr8_2:4482337-4482356 Msa1228870:CDS 45.0%
AACCTTCTCGCACATTGAAG+GGG + chr8_2:4482339-4482358 Msa1228870:CDS 45.0%
TCTTCTCGCATGTTGAAGGA+TGG + chr8_2:4482566-4482585 Msa1228870:CDS 45.0%
CGTGCTCATAGAACAACTGA+TGG + chr8_2:4483058-4483077 Msa1228870:CDS 45.0%
AACGGAAAGGAATAGGGTCA+AGG + chr8_2:4483165-4483184 Msa1228870:intron 45.0%
ACGGAAAGGAATAGGGTCAA+GGG + chr8_2:4483166-4483185 Msa1228870:intron 45.0%
! CGGAATATGCTTGAGCGTTT+TGG + chr8_2:4483603-4483622 Msa1228870:CDS 45.0%
TGAACTCGAGAGAAAGGATG+GGG - chr8_2:4483914-4483933 None:intergenic 45.0%
GATGAACTCGAGAGAAAGGA+TGG - chr8_2:4483916-4483935 None:intergenic 45.0%
CGAGAGAAAAGGAAGTTTCC+AGG - chr8_2:4484266-4484285 None:intergenic 45.0%
TGGCAAGGTTGAAGTCGATA+AGG - chr8_2:4484307-4484326 None:intergenic 45.0%
!! TATCGACTTCAACCTTGCCA+TGG + chr8_2:4484307-4484326 Msa1228870:CDS 45.0%
ACTTCAACCTTGCCATGGTT+AGG + chr8_2:4484312-4484331 Msa1228870:intron 45.0%
CAAGAGAAGCAACCTAACCA+TGG - chr8_2:4484327-4484346 None:intergenic 45.0%
GGGTTTCACCCAATAAGAGA+TGG - chr8_2:4484654-4484673 None:intergenic 45.0%
CTTATTGGGTGAAACCCATG+TGG + chr8_2:4484657-4484676 Msa1228870:intron 45.0%
TAAAGTGGTGAGACCCACAT+GGG - chr8_2:4484674-4484693 None:intergenic 45.0%
ATAAAGTGGTGAGACCCACA+TGG - chr8_2:4484675-4484694 None:intergenic 45.0%
! TGGGTCTCACACTTTGGAAA+TGG - chr8_2:4484705-4484724 None:intergenic 45.0%
! CTTATTTGGTGAGACCCATG+TGG - chr8_2:4484725-4484744 None:intergenic 45.0%
GTCCATAACACTCCTCAATG+CGG + chr8_2:4484768-4484787 Msa1228870:intron 45.0%
TTACTGGATGCATCAAGCCT+TGG - chr8_2:4484866-4484885 None:intergenic 45.0%
AGACGGGAGAGGAATATTAC+TGG - chr8_2:4484882-4484901 None:intergenic 45.0%
AGTAATATTCCTCTCCCGTC+TGG + chr8_2:4484881-4484900 Msa1228870:CDS 45.0%
ATTCTTGTCTTGGACCACAG+GGG - chr8_2:4484912-4484931 None:intergenic 45.0%
GATTCTTGTCTTGGACCACA+GGG - chr8_2:4484913-4484932 None:intergenic 45.0%
AGATTCTTGTCTTGGACCAC+AGG - chr8_2:4484914-4484933 None:intergenic 45.0%
GTGGTCCAAGACAAGAATCT+TGG + chr8_2:4484914-4484933 Msa1228870:CDS 45.0%
GTCCAAGACAAGAATCTTGG+AGG + chr8_2:4484917-4484936 Msa1228870:CDS 45.0%
GCGAATTTACGTAGAGCACA+AGG + chr8_2:4485073-4485092 Msa1228870:CDS 45.0%
ACTAGCACTAAGACTGCTTC+TGG + chr8_2:4485133-4485152 Msa1228870:CDS 45.0%
! CTTTGAAGGGTATGGGTTCT+CGG - chr8_2:4485168-4485187 None:intergenic 45.0%
GTCCTTCTTCTCAGAGGAAA+AGG + chr8_2:4485254-4485273 Msa1228870:CDS 45.0%
!! ACCCTTTTCCTCTGAGAAGA+AGG - chr8_2:4485259-4485278 None:intergenic 45.0%
AAAAGGGTTACTGCTCCTTC+AGG + chr8_2:4485271-4485290 Msa1228870:CDS 45.0%
AAAAGAGAGGGTCCATGTGT+TGG + chr8_2:4485482-4485501 Msa1228870:CDS 45.0%
GGTCCATGTGTTGGAACAAA+GGG + chr8_2:4485491-4485510 Msa1228870:CDS 45.0%
AAGCGCAAGAATTTACCTCC+GGG - chr8_2:4485526-4485545 None:intergenic 45.0%
GAAATTCTACAGTGCTGTGG+AGG + chr8_2:4485707-4485726 Msa1228870:intron 45.0%
GCTGTGGAGGTTGCAAATAT+AGG + chr8_2:4485720-4485739 Msa1228870:intron 45.0%
TTAGATATGGTTCAGGTGGG+GGG + chr8_2:4485863-4485882 Msa1228870:intron 45.0%
!! AGGGCCCTAAGGTTGATATT+TGG + chr8_2:4486482-4486501 Msa1228870:CDS 45.0%
GCCGACCAAATATCAACCTT+AGG - chr8_2:4486490-4486509 None:intergenic 45.0%
!! AAGGTTGATATTTGGTCGGC+TGG + chr8_2:4486490-4486509 Msa1228870:CDS 45.0%
!! TTTACTGTTCTGGTTCGCCA+GGG - chr8_2:4486555-4486574 None:intergenic 45.0%
!!! TTTTACTGTTCTGGTTCGCC+AGG - chr8_2:4486556-4486575 None:intergenic 45.0%
GCACCAAAACATAGTCAGCA+CGG - chr8_2:4486622-4486641 None:intergenic 45.0%
!!! TGCTGACTATGTTTTGGTGC+AGG + chr8_2:4486622-4486641 Msa1228870:intron 45.0%
CCACTGGAAAGGATGTTTCA+CGG - chr8_2:4486713-4486732 None:intergenic 45.0%
ACTAAGTGGGGTCAACTACA+TGG - chr8_2:4486965-4486984 None:intergenic 45.0%
ATGTAGTTGACCCCACTTAG+TGG + chr8_2:4486964-4486983 Msa1228870:intron 45.0%
TGTAGTTGACCCCACTTAGT+GGG + chr8_2:4486965-4486984 Msa1228870:intron 45.0%
CCAAGCATTATCCCACTAAG+TGG - chr8_2:4486979-4486998 None:intergenic 45.0%
CCACTTAGTGGGATAATGCT+TGG + chr8_2:4486976-4486995 Msa1228870:intron 45.0%
CTAGTCAATTCTCACTTCGC+AGG - chr8_2:4487173-4487192 None:intergenic 45.0%
GTTTGCCTCCTTTGGATTAC+AGG + chr8_2:4487452-4487471 Msa1228870:intron 45.0%
AGTGCCTAACAGTAAACCCA+AGG + chr8_2:4487592-4487611 Msa1228870:CDS 45.0%
AAGACAAGGATGCTTCAACG+AGG + chr8_2:4487681-4487700 Msa1228870:CDS 45.0%
GCTGAAATCACAGGTTATGG+TGG - chr8_2:4487958-4487977 None:intergenic 45.0%
! ATTTTGGATCGGCGGTGTGA+GGG - chr8_2:4480066-4480085 None:intergenic 50.0%
!! AGGATTGGTCTTCGAGGAGT+GGG - chr8_2:4480128-4480147 None:intergenic 50.0%
GTTGAAGAAGCGGCAACGAA+GGG - chr8_2:4480208-4480227 None:intergenic 50.0%
CAGGAAGTGAAGCAACGTGA+CGG - chr8_2:4480248-4480267 None:intergenic 50.0%
CCGTTACTGTTAACGGAGAG+AGG - chr8_2:4480276-4480295 None:intergenic 50.0%
CATGGCGAAAGCAGCTTCAA+CGG - chr8_2:4480313-4480332 None:intergenic 50.0%
CAGGTGGAAGAGATCCGAAA+CGG + chr8_2:4480511-4480530 Msa1228870:intron 50.0%
GATCCGAAACGGCTTGCAAT+TGG + chr8_2:4480522-4480541 Msa1228870:CDS 50.0%
CGAGGGTCTAGATAGATTCG+TGG + chr8_2:4481698-4481717 Msa1228870:CDS 50.0%
CCCTACTGTGGATGGTGAAA+AGG + chr8_2:4481866-4481885 Msa1228870:CDS 50.0%
GGATCTTCTCCACATGCTAC+AGG - chr8_2:4482029-4482048 None:intergenic 50.0%
AGGGCCAATCCTGTAGTATG+TGG + chr8_2:4482176-4482195 Msa1228870:CDS 50.0%
GGCTCTTCTCCACATACTAC+AGG - chr8_2:4482188-4482207 None:intergenic 50.0%
ACCTTCTCGCACATTGAAGG+GGG + chr8_2:4482340-4482359 Msa1228870:CDS 50.0%
TGTTGAGCATGAGAGACCTG+AGG + chr8_2:4483779-4483798 Msa1228870:CDS 50.0%
ACTTGCGTGCTTGCACAAAG+AGG + chr8_2:4484131-4484150 Msa1228870:CDS 50.0%
GAAGCAACCTAACCATGGCA+AGG - chr8_2:4484322-4484341 None:intergenic 50.0%
TCCAAAGTGTGAGACCCACA+TGG + chr8_2:4484707-4484726 Msa1228870:intron 50.0%
CCAAAGTGTGAGACCCACAT+GGG + chr8_2:4484708-4484727 Msa1228870:intron 50.0%
!! GACCGCATTGAGGAGTGTTA+TGG - chr8_2:4484773-4484792 None:intergenic 50.0%
TTCCTACGATCTGCCAGATC+TGG - chr8_2:4484977-4484996 None:intergenic 50.0%
ATGAAGGCAAAAGCGGATGC+TGG + chr8_2:4485019-4485038 Msa1228870:CDS 50.0%
GCTAGTAACATCTCTGGCAG+AGG - chr8_2:4485119-4485138 None:intergenic 50.0%
CTAAGACTGCTTCTGGCGAT+AGG + chr8_2:4485140-4485159 Msa1228870:CDS 50.0%
CGAGAACCCATACCCTTCAA+AGG + chr8_2:4485166-4485185 Msa1228870:CDS 50.0%
GGGTCCATGTGTTGGAACAA+AGG + chr8_2:4485490-4485509 Msa1228870:CDS 50.0%
AAGAATTTACCTCCGGGGCA+CGG - chr8_2:4485520-4485539 None:intergenic 50.0%
AGCGCAAGAATTTACCTCCG+GGG - chr8_2:4485525-4485544 None:intergenic 50.0%
! GTAGTTTCCTGCTGACTGGT+TGG + chr8_2:4485894-4485913 Msa1228870:intron 50.0%
GATAAGTCCAACCAGTCAGC+AGG - chr8_2:4485904-4485923 None:intergenic 50.0%
AACTGACCTTCATCTTGGGC+AGG + chr8_2:4486060-4486079 Msa1228870:intron 50.0%
ACTGACCTTCATCTTGGGCA+GGG + chr8_2:4486061-4486080 Msa1228870:intron 50.0%
TTCTTCCCTGCCCAAGATGA+AGG - chr8_2:4486069-4486088 None:intergenic 50.0%
TCATCTTGGGCAGGGAAGAA+AGG + chr8_2:4486069-4486088 Msa1228870:intron 50.0%
CATCTTGGGCAGGGAAGAAA+GGG + chr8_2:4486070-4486089 Msa1228870:intron 50.0%
ATCTTGGGCAGGGAAGAAAG+GGG + chr8_2:4486071-4486090 Msa1228870:intron 50.0%
ATCTCAGTTTCAGGGCCCTA+AGG + chr8_2:4486471-4486490 Msa1228870:CDS 50.0%
TGTTTCACGGTCATGCAGCT+TGG - chr8_2:4486700-4486719 None:intergenic 50.0%
CCGTGAAACATCCTTTCCAG+TGG + chr8_2:4486710-4486729 Msa1228870:CDS 50.0%
CTTTGTGTGCAACTTGCACC+AGG - chr8_2:4487520-4487539 None:intergenic 50.0%
AGGATGCTTCAACGAGGACT+TGG + chr8_2:4487687-4487706 Msa1228870:CDS 50.0%
AAAAGGAGTAGGAGCGGAGC+GGG - chr8_2:4479986-4480005 None:intergenic 55.0%
GAAAAGGAGTAGGAGCGGAG+CGG - chr8_2:4479987-4480006 None:intergenic 55.0%
! TTTTGGATCGGCGGTGTGAG+GGG - chr8_2:4480065-4480084 None:intergenic 55.0%
! CATTTTGGATCGGCGGTGTG+AGG - chr8_2:4480067-4480086 None:intergenic 55.0%
! GCGGAGACATTTTGGATCGG+CGG - chr8_2:4480074-4480093 None:intergenic 55.0%
! CCGGCGGAGACATTTTGGAT+CGG - chr8_2:4480077-4480096 None:intergenic 55.0%
CCGATCCAAAATGTCTCCGC+CGG + chr8_2:4480074-4480093 Msa1228870:exon 55.0%
! TGGTTCCGGCGGAGACATTT+TGG - chr8_2:4480082-4480101 None:intergenic 55.0%
TTCGAGGAGTGGGGTTGGAT+CGG - chr8_2:4480118-4480137 None:intergenic 55.0%
!! GGATTGGTCTTCGAGGAGTG+GGG - chr8_2:4480127-4480146 None:intergenic 55.0%
!! CAGGATTGGTCTTCGAGGAG+TGG - chr8_2:4480129-4480148 None:intergenic 55.0%
CACTCCTCGAAGACCAATCC+TGG + chr8_2:4480127-4480146 Msa1228870:CDS 55.0%
CTCTCTCTCCTCCTCCAGAT+CGG + chr8_2:4480156-4480175 Msa1228870:CDS 55.0%
! GAAAGATACTCCGCGTCGAC+GGG - chr8_2:4480186-4480205 None:intergenic 55.0%
GGAAAGATACTCCGCGTCGA+CGG - chr8_2:4480187-4480206 None:intergenic 55.0%
CGTTGAAGAAGCGGCAACGA+AGG - chr8_2:4480209-4480228 None:intergenic 55.0%
!! GCAACGTGACGGACGAAATC+CGG - chr8_2:4480237-4480256 None:intergenic 55.0%
GCGAAAGCAGCTTCAACGGA+AGG - chr8_2:4480309-4480328 None:intergenic 55.0%
! CGTTGAAGCTGCTTTCGCCA+TGG + chr8_2:4480311-4480330 Msa1228870:CDS 55.0%
! AAGCTGCTTTCGCCATGGCT+AGG + chr8_2:4480316-4480335 Msa1228870:CDS 55.0%
AAGTGACTCGAGGAAGCTCG+AGG + chr8_2:4481680-4481699 Msa1228870:CDS 55.0%
AGTGACTCGAGGAAGCTCGA+GGG + chr8_2:4481681-4481700 Msa1228870:CDS 55.0%
AGGGTCGATCCTGTAGCATG+TGG + chr8_2:4482017-4482036 Msa1228870:CDS 55.0%
CCTTCTCGCACATTGAAGGG+GGG + chr8_2:4482341-4482360 Msa1228870:CDS 55.0%
CCCATGTGGGTCTCACACTT+TGG - chr8_2:4484711-4484730 None:intergenic 55.0%
ACCACAGGGGAAGAACCAGA+CGG - chr8_2:4484899-4484918 None:intergenic 55.0%
TGCCAGATCTGGCAGATCGT+AGG + chr8_2:4484972-4484991 Msa1228870:CDS 55.0%
CGTAGAGCACAAGGAGCAGA+TGG + chr8_2:4485082-4485101 Msa1228870:CDS 55.0%
AGCACAAGGAGCAGATGGCT+CGG + chr8_2:4485087-4485106 Msa1228870:CDS 55.0%
GGTTACTGCTCCTTCAGGCA+AGG + chr8_2:4485276-4485295 Msa1228870:CDS 55.0%
GCTCCTTCAGGCAAGGTAGA+TGG + chr8_2:4485283-4485302 Msa1228870:CDS 55.0%
CTGCCATCTACCTTGCCTGA+AGG - chr8_2:4485289-4485308 None:intergenic 55.0%
CTTCAGGCAAGGTAGATGGC+AGG + chr8_2:4485287-4485306 Msa1228870:CDS 55.0%
AACAAAGGGTTTCCGTGCCC+CGG + chr8_2:4485505-4485524 Msa1228870:CDS 55.0%
CTCTTCACTGCCCCGCAATT+TGG - chr8_2:4486664-4486683 None:intergenic 55.0%
!! CAGTGAAGAGCTTTGGGAGG+TGG + chr8_2:4486674-4486693 Msa1228870:CDS 55.0%
TGGTCTTCGAGGAGTGGGGT+TGG - chr8_2:4480123-4480142 None:intergenic 60.0%
!! GGTGCCAGGATTGGTCTTCG+AGG - chr8_2:4480134-4480153 None:intergenic 60.0%
!! GAGAGAGGAGGTGCCAGGAT+TGG - chr8_2:4480143-4480162 None:intergenic 60.0%
TCTGGAGGAGGAGAGAGAGG+AGG - chr8_2:4480155-4480174 None:intergenic 60.0%
CGATCTGGAGGAGGAGAGAG+AGG - chr8_2:4480158-4480177 None:intergenic 60.0%
!! CCGGCGAAGCGTTGAAGAAG+CGG - chr8_2:4480218-4480237 None:intergenic 60.0%
CCGCTTCTTCAACGCTTCGC+CGG + chr8_2:4480215-4480234 Msa1228870:CDS 60.0%
CCCCCCTTCAATGTGCGAGA+AGG - chr8_2:4482344-4482363 None:intergenic 60.0%
CCACAGGGGAAGAACCAGAC+GGG - chr8_2:4484898-4484917 None:intergenic 60.0%
GCACAAGGAGCAGATGGCTC+GGG + chr8_2:4485088-4485107 Msa1228870:CDS 60.0%
TGCGGGGCAGTGAAGAGCTT+TGG + chr8_2:4486667-4486686 Msa1228870:CDS 60.0%
GCGGGGCAGTGAAGAGCTTT+GGG + chr8_2:4486668-4486687 Msa1228870:CDS 60.0%
!! GGGCAGTGAAGAGCTTTGGG+AGG + chr8_2:4486671-4486690 Msa1228870:CDS 60.0%
! AGTTGCGGTGGTGGTTCCGG+CGG - chr8_2:4480093-4480112 None:intergenic 65.0%
! GCGAGTTGCGGTGGTGGTTC+CGG - chr8_2:4480096-4480115 None:intergenic 65.0%
GTTGGATCGGCGAGTTGCGG+TGG - chr8_2:4480105-4480124 None:intergenic 65.0%
GGGGTTGGATCGGCGAGTTG+CGG - chr8_2:4480108-4480127 None:intergenic 65.0%
!! GAGGAGAGAGAGGAGGTGCC+AGG - chr8_2:4480148-4480167 None:intergenic 65.0%
CGGGATGACCGATCTGGAGG+AGG - chr8_2:4480167-4480186 None:intergenic 65.0%
CGACGGGATGACCGATCTGG+AGG - chr8_2:4480170-4480189 None:intergenic 65.0%
CGTCGACGGGATGACCGATC+TGG - chr8_2:4480173-4480192 None:intergenic 65.0%
GATCGGTCATCCCGTCGACG+CGG + chr8_2:4480173-4480192 Msa1228870:CDS 65.0%
GGGGAAGAACCAGACGGGAG+AGG - chr8_2:4484893-4484912 None:intergenic 65.0%
!! CCCGTCTGGTTCTTCCCCTG+TGG + chr8_2:4484895-4484914 Msa1228870:CDS 65.0%
AAAGGGTTTCCGTGCCCCGG+AGG + chr8_2:4485508-4485527 Msa1228870:CDS 65.0%
GGATCGGCGAGTTGCGGTGG+TGG - chr8_2:4480102-4480121 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 4479949 4488015 4479949 ID=Msa1228870;Name=Msa1228870
chr8_2 mRNA 4479949 4488015 4479949 ID=Msa1228870-mRNA-1;Parent=Msa1228870;Name=Msa1228870-mRNA-1;_AED=0.10;_eAED=0.10;_QI=135|1|1|1|1|1|15|272|1087
chr8_2 exon 4479949 4480414 4479949 ID=Msa1228870-mRNA-1:exon:1449;Parent=Msa1228870-mRNA-1
chr8_2 exon 4480514 4480572 4480514 ID=Msa1228870-mRNA-1:exon:1450;Parent=Msa1228870-mRNA-1
chr8_2 exon 4481432 4482766 4481432 ID=Msa1228870-mRNA-1:exon:1451;Parent=Msa1228870-mRNA-1
chr8_2 exon 4482893 4482953 4482893 ID=Msa1228870-mRNA-1:exon:1452;Parent=Msa1228870-mRNA-1
chr8_2 exon 4483038 4483100 4483038 ID=Msa1228870-mRNA-1:exon:1453;Parent=Msa1228870-mRNA-1
chr8_2 exon 4483562 4483625 4483562 ID=Msa1228870-mRNA-1:exon:1454;Parent=Msa1228870-mRNA-1
chr8_2 exon 4483707 4483800 4483707 ID=Msa1228870-mRNA-1:exon:1455;Parent=Msa1228870-mRNA-1
chr8_2 exon 4484069 4484152 4484069 ID=Msa1228870-mRNA-1:exon:1456;Parent=Msa1228870-mRNA-1
chr8_2 exon 4484239 4484328 4484239 ID=Msa1228870-mRNA-1:exon:1457;Parent=Msa1228870-mRNA-1
chr8_2 exon 4484416 4484443 4484416 ID=Msa1228870-mRNA-1:exon:1458;Parent=Msa1228870-mRNA-1
chr8_2 exon 4484852 4485376 4484852 ID=Msa1228870-mRNA-1:exon:1459;Parent=Msa1228870-mRNA-1
chr8_2 exon 4485468 4485529 4485468 ID=Msa1228870-mRNA-1:exon:1460;Parent=Msa1228870-mRNA-1
chr8_2 exon 4486460 4486569 4486460 ID=Msa1228870-mRNA-1:exon:1461;Parent=Msa1228870-mRNA-1
chr8_2 exon 4486644 4486731 4486644 ID=Msa1228870-mRNA-1:exon:1462;Parent=Msa1228870-mRNA-1
chr8_2 exon 4487474 4488015 4487474 ID=Msa1228870-mRNA-1:exon:1463;Parent=Msa1228870-mRNA-1
chr8_2 five_prime_UTR 4479949 4480083 4479949 ID=Msa1228870-mRNA-1:five_prime_utr;Parent=Msa1228870-mRNA-1
chr8_2 CDS 4480084 4480414 4480084 ID=Msa1228870-mRNA-1:cds;Parent=Msa1228870-mRNA-1
chr8_2 CDS 4480514 4480572 4480514 ID=Msa1228870-mRNA-1:cds;Parent=Msa1228870-mRNA-1
chr8_2 CDS 4481432 4482766 4481432 ID=Msa1228870-mRNA-1:cds;Parent=Msa1228870-mRNA-1
chr8_2 CDS 4482893 4482953 4482893 ID=Msa1228870-mRNA-1:cds;Parent=Msa1228870-mRNA-1
chr8_2 CDS 4483038 4483100 4483038 ID=Msa1228870-mRNA-1:cds;Parent=Msa1228870-mRNA-1
chr8_2 CDS 4483562 4483625 4483562 ID=Msa1228870-mRNA-1:cds;Parent=Msa1228870-mRNA-1
chr8_2 CDS 4483707 4483800 4483707 ID=Msa1228870-mRNA-1:cds;Parent=Msa1228870-mRNA-1
chr8_2 CDS 4484069 4484152 4484069 ID=Msa1228870-mRNA-1:cds;Parent=Msa1228870-mRNA-1
chr8_2 CDS 4484239 4484328 4484239 ID=Msa1228870-mRNA-1:cds;Parent=Msa1228870-mRNA-1
chr8_2 CDS 4484416 4484443 4484416 ID=Msa1228870-mRNA-1:cds;Parent=Msa1228870-mRNA-1
chr8_2 CDS 4484852 4485376 4484852 ID=Msa1228870-mRNA-1:cds;Parent=Msa1228870-mRNA-1
chr8_2 CDS 4485468 4485529 4485468 ID=Msa1228870-mRNA-1:cds;Parent=Msa1228870-mRNA-1
chr8_2 CDS 4486460 4486569 4486460 ID=Msa1228870-mRNA-1:cds;Parent=Msa1228870-mRNA-1
chr8_2 CDS 4486644 4486731 4486644 ID=Msa1228870-mRNA-1:cds;Parent=Msa1228870-mRNA-1
chr8_2 CDS 4487474 4487743 4487474 ID=Msa1228870-mRNA-1:cds;Parent=Msa1228870-mRNA-1
chr8_2 three_prime_UTR 4487744 4488015 4487744 ID=Msa1228870-mRNA-1:three_prime_utr;Parent=Msa1228870-mRNA-1
Gene Sequence

>Msa1228870

ATGTCTCCGCCGGAACCACCACCGCAACTCGCCGATCCAACCCCACTCCTCGAAGACCAATCCTGGCACCTCCTCTCTCTCCTCCTCCAGATCGGTCATCCCGTCGACGCGGAGTATCTTTCCCTTCGTTGCCGCTTCTTCAACGCTTCGCCGGATTTCGTCCGTCACGTTGCTTCACTTCCTGATTCTCCTCTCTCCGTTAACAGTAACGGATTTCTAACTCCTTCCGTTGAAGCTGCTTTCGCCATGGCTAGGTTTTTCTCATTTCAGTTCCAAAATTCAACTCCGTTTCACTCCCGTAAACGCAAGTCAATTTGCTCAATCACTCAAGGTGGAAGAGATCCGAAACGGCTTGCAATTGGTGATAAAGTTCCAGAAATTTTCGTTAAGAGTTTTGCTGATACTACTGCAGAGGCTGTTATGAGAAAAAGTTTCTGTGCAATGAAATTTGAGTCTCGGATTGTAAATGGTGGGAATTATATGATTCCTATACGTATTGATTCAATTGGAGAATGTTCAGGTTGTTCAGAACCGAATTTCAAATACAGGGAAGCTGATAATGACGGCATAACAAGCATGGTCAAAGGAGAGATATCTGGCTCTCTTATCAAAGCCAATGAGAGTTTCTTCATTAGTGAAAGTGACTCGAGGAAGCTCGAGGGTCTAGATAGATTCGTGGGACATAATCCCTTTGCTAATCTTGCTCCACCAACTAGTGTCCAAGATCAATCTTTGTGTAATGATGATGTTGTTGGTATTGGATCAGAGGACAAAATGGATTGCTTTGACTCATTTGGGAATGAATATCCTGAACAAAACATAACCCCTACTGTGGATGGTGAAAAGGTTTGTCGAAATAATACTTGCAGAGATTCACTACTAGAATCTAATGAAATAAATAAAGAAGAGAAAAGAGGTCCAAAGGAAGGATTGGTTAATTATGAGAATGATAGAGAGATGGAAGATGTTGCTCAAAGGGTCGATCCTGTAGCATGTGGAGAAGATCCGACAGATGTTTTGGAATTGGAAAAGGGTATAATAAGAGAATCTATTGAAAAATATAAAGAGGAAAGAGGTTTGAAGGAAGGAATGATTAACTATGACAAAAATGAAGAGATGGAAGATGTTGCTCTGAGGGCCAATCCTGTAGTATGTGGAGAAGAGCCAACAAAAGTTTTGGAATTGAAAAAGGGCATGCATGTATTAGATTTGGATACAAACAAGACAGTGAGAAAAATGGTGACCCGGTCTACAAATAAAATAGCTCAGTCCTCTTCAAATCCAAAGCAGCTTCTGAAACCTTCTCGCACATTGAAGGGGGGACAGAAAAATGATCTACACTCTAAGCCTCAAATTCTAACCGAGTCACTAGCCTGTAACAAATTTGATAATGTTCCAAAAAAAATTGATCAAAGTAATGATCAGAACATTATTGAAGGTGATGAAGGTAAGGATCAGAACATGGTGACCCAGTCTAACAATAAAGTAGCTCAGCCCTCTTCAAATCCAAAGCAGCTTCTGAAATCTTCTCGCATGTTGAAGGATGGACAGAAACATGATCTACACTCAAAGACTCAAAATCTAACTGAGTCACTAGCCTGTAACAAATCTGATAATGTTCCAAAAAAAATTGATCAAGGTCATGATCAGAGTATTATTTCAAAAAACAAAATAAAACAAAGTCGTAAAGAAAACGCGACAGAAGATAACTTCATGACTTCTAAGGTAGAGAAAAAAACATTTCCATCTTTTGAATCTTTTATAATAGAGGAAGAAGAAGGTTCAGGTGGTTATGGCATTGTTTACCGTGCTCATAGAACAACTGATGGAAAAAGACTTGCTATAAAATGTCCTCATAGCAATGCTCATAAAAACCATGTAAATAATGAGCGGAATATGCTTGAGCGTTTTGGGGGTAAAAACTGTATTATAAAGTTTGAAGGTTCTTTCAAAAGTGGCAACAGTGACTGCTTTGTTTTAGAACATGTTGAGCATGAGAGACCTGAGGTTTTGAAAAAAGAAATTGATATATGTGAGCTTCAATGGTATGGGTTTTGCATGTTCAAGGCACTTGCGTGCTTGCACAAAGAGGGAGTTGTTCACAGAGATGTTAAACCTGGAAACTTCCTTTTCTCTCGAAAGCTAAAGAAAGGCTACCTTATCGACTTCAACCTTGCCATGGATTTGAAGCAGAAGTACAACATCGGAAGTAAATCAAAACCAAGGCTTGATGCATCCAGTAATATTCCTCTCCCGTCTGGTTCTTCCCCTGTGGTCCAAGACAAGAATCTTGGAGGAATCAAGGCTCTAACATCCAATAAAAGGGAATTGCCAGATCTGGCAGATCGTAGGAAATATTATGAAATTCGTAAGCATATGAAGGCAAAAGCGGATGCTGGTCATCTGAAAAATTGTCCCGATAAGGCTGTTGCGAATTTACGTAGAGCACAAGGAGCAGATGGCTCGGGTATAACCTCTGCCAGAGATGTTACTAGCACTAAGACTGCTTCTGGCGATAGGCTCCGAGAACCCATACCCTTCAAAGGAAGAAAGGAGCTTATCAGCCTCGTGCAGAATTCTATGCAATGTGCAAACAATAGTTCAATGAAAAGTCCTTCTTCTCAGAGGAAAAGGGTTACTGCTCCTTCAGGCAAGGTAGATGGCAGGACGCTTTATCTTACGCCAATGCCTATACATTCATCTACGGTTGCTTTGGGGTTATTAAGAAGCAAAGGGGACGGAAAACATAAAAGAGAGGGTCCATGTGTTGGAACAAAGGGTTTCCGTGCCCCGGAGGTTTTGTTCAGATCTCAGTTTCAGGGCCCTAAGGTTGATATTTGGTCGGCTGGAGTCACTCTACTATACATGCTGATTGGGAAAACTTCTTTCCCTGGCGAACCAGAACAGAGTTTAAAAGAAATTGCCAAATTGCGGGGCAGTGAAGAGCTTTGGGAGGTGGCCAAGCTGCATGACCGTGAAACATCCTTTCCAGTGGAGTTATTTGATGACCGATACTTGCAATCATATGACATAGAAACCTGGTGCAAGTTGCACACAAAGAGACCAGAGTTTGTTGATAAAATCCCGAAATCATTGTTTGATTTAATAGAGAAGTGCCTAACAGTAAACCCAAGGAATAGGATTAGTGTTGAAGATGTTCTCAGGCATGAGTTTTTTGCCTCGTGTAATGAGATCATGAGAAAGACAAGGATGCTTCAACGAGGACTTGGCTTAGAAACTGCAGCAGATTCAAGAGCAGTCTGA
Protein sequence

>Msa1228870

MSPPEPPPQLADPTPLLEDQSWHLLSLLLQIGHPVDAEYLSLRCRFFNASPDFVRHVASLPDSPLSVNSNGFLTPSVEAAFAMARFFSFQFQNSTPFHSRKRKSICSITQGGRDPKRLAIGDKVPEIFVKSFADTTAEAVMRKSFCAMKFESRIVNGGNYMIPIRIDSIGECSGCSEPNFKYREADNDGITSMVKGEISGSLIKANESFFISESDSRKLEGLDRFVGHNPFANLAPPTSVQDQSLCNDDVVGIGSEDKMDCFDSFGNEYPEQNITPTVDGEKVCRNNTCRDSLLESNEINKEEKRGPKEGLVNYENDREMEDVAQRVDPVACGEDPTDVLELEKGIIRESIEKYKEERGLKEGMINYDKNEEMEDVALRANPVVCGEEPTKVLELKKGMHVLDLDTNKTVRKMVTRSTNKIAQSSSNPKQLLKPSRTLKGGQKNDLHSKPQILTESLACNKFDNVPKKIDQSNDQNIIEGDEGKDQNMVTQSNNKVAQPSSNPKQLLKSSRMLKDGQKHDLHSKTQNLTESLACNKSDNVPKKIDQGHDQSIISKNKIKQSRKENATEDNFMTSKVEKKTFPSFESFIIEEEEGSGGYGIVYRAHRTTDGKRLAIKCPHSNAHKNHVNNERNMLERFGGKNCIIKFEGSFKSGNSDCFVLEHVEHERPEVLKKEIDICELQWYGFCMFKALACLHKEGVVHRDVKPGNFLFSRKLKKGYLIDFNLAMDLKQKYNIGSKSKPRLDASSNIPLPSGSSPVVQDKNLGGIKALTSNKRELPDLADRRKYYEIRKHMKAKADAGHLKNCPDKAVANLRRAQGADGSGITSARDVTSTKTASGDRLREPIPFKGRKELISLVQNSMQCANNSSMKSPSSQRKRVTAPSGKVDGRTLYLTPMPIHSSTVALGLLRSKGDGKHKREGPCVGTKGFRAPEVLFRSQFQGPKVDIWSAGVTLLYMLIGKTSFPGEPEQSLKEIAKLRGSEELWEVAKLHDRETSFPVELFDDRYLQSYDIETWCKLHTKRPEFVDKIPKSLFDLIEKCLTVNPRNRISVEDVLRHEFFASCNEIMRKTRMLQRGLGLETAADSRAV*