Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0035060 | KEH43178.1 | 93.765 | 818 | 29 | 2 | 1 | 817 | 1 | 797 | 0.0 | 1550 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0035060 | sp|Q0WR66|ASY3_ARATH | 30.834 | 827 | 476 | 27 | 14 | 793 | 1 | 778 | 2.08e-69 | 248 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0035060 | 0.845815 | 3.209329e-59 | -8.615850e-47 |
| Msa0001940 | Msa0035060 | 0.815241 | 1.022613e-51 | -8.615850e-47 |
| Msa0002580 | Msa0035060 | 0.828201 | 1.025423e-54 | -8.615850e-47 |
| Msa0017670 | Msa0035060 | 0.813590 | 2.369455e-51 | -8.615850e-47 |
| Msa0017930 | Msa0035060 | 0.804587 | 2.011487e-49 | -8.615850e-47 |
| Msa0017950 | Msa0035060 | 0.816872 | 4.419827e-52 | -8.615850e-47 |
| Msa0027280 | Msa0035060 | 0.805943 | 1.045937e-49 | -8.615850e-47 |
| Msa0032920 | Msa0035060 | -0.802560 | 5.294638e-49 | -8.615850e-47 |
| Msa0032960 | Msa0035060 | -0.817467 | 3.247658e-52 | -8.615850e-47 |
| Msa0034810 | Msa0035060 | 0.806374 | 8.485659e-50 | -8.615850e-47 |
| Msa0035060 | Msa0036870 | 0.832421 | 9.546428e-56 | -8.615850e-47 |
| Msa0035060 | Msa0042610 | 0.817587 | 3.052333e-52 | -8.615850e-47 |
| Msa0035060 | Msa0042640 | 0.840159 | 1.028133e-57 | -8.615850e-47 |
| Msa0035060 | Msa0077340 | 0.827637 | 1.401880e-54 | -8.615850e-47 |
| Msa0035060 | Msa0081390 | 0.892249 | 1.888863e-74 | -8.615850e-47 |
| Msa0035060 | Msa0081450 | 0.896514 | 3.428857e-76 | -8.615850e-47 |
| Msa0035060 | Msa0081980 | 0.807418 | 5.105449e-50 | -8.615850e-47 |
| Msa0035060 | Msa0094780 | 0.825668 | 4.133588e-54 | -8.615850e-47 |
| Msa0035060 | Msa0098040 | 0.824730 | 6.890108e-54 | -8.615850e-47 |
| Msa0035060 | Msa0125360 | 0.825418 | 4.739409e-54 | -8.615850e-47 |
| Msa0035060 | Msa0136650 | 0.806066 | 9.851090e-50 | -8.615850e-47 |
| Msa0035060 | Msa0173690 | 0.941599 | 3.143608e-101 | -8.615850e-47 |
| Msa0035060 | Msa0174450 | 0.813824 | 2.104789e-51 | -8.615850e-47 |
| Msa0035060 | Msa0190570 | 0.800892 | 1.164228e-48 | -8.615850e-47 |
| Msa0035060 | Msa0221000 | 0.827419 | 1.580743e-54 | -8.615850e-47 |
| Msa0035060 | Msa0225100 | 0.843035 | 1.794413e-58 | -8.615850e-47 |
| Msa0035060 | Msa0225860 | 0.828602 | 8.208144e-55 | -8.615850e-47 |
| Msa0035060 | Msa0231200 | 0.805156 | 1.529568e-49 | -8.615850e-47 |
| Msa0035060 | Msa0237210 | 0.800611 | 1.328987e-48 | -8.615850e-47 |
| Msa0035060 | Msa0240900 | 0.809117 | 2.217161e-50 | -8.615850e-47 |
| Msa0035060 | Msa0244640 | 0.839855 | 1.234285e-57 | -8.615850e-47 |
| Msa0035060 | Msa0266180 | 0.830903 | 2.258808e-55 | -8.615850e-47 |
| Msa0035060 | Msa0283330 | 0.824240 | 8.983366e-54 | -8.615850e-47 |
| Msa0035060 | Msa0287740 | 0.853583 | 2.171530e-61 | -8.615850e-47 |
| Msa0035060 | Msa0298470 | 0.819275 | 1.264831e-52 | -8.615850e-47 |
| Msa0035060 | Msa0300270 | 0.819996 | 8.658270e-53 | -8.615850e-47 |
| Msa0035060 | Msa0300320 | 0.811062 | 8.447608e-51 | -8.615850e-47 |
| Msa0035060 | Msa0307270 | 0.816167 | 6.358577e-52 | -8.615850e-47 |
| Msa0035060 | Msa0307670 | 0.826867 | 2.142933e-54 | -8.615850e-47 |
| Msa0035060 | Msa0315690 | 0.815721 | 7.995559e-52 | -8.615850e-47 |
| Msa0035060 | Msa0321620 | 0.823627 | 1.250942e-53 | -8.615850e-47 |
| Msa0035060 | Msa0323270 | 0.809779 | 1.598234e-50 | -8.615850e-47 |
| Msa0035060 | Msa0337700 | 0.834439 | 2.995683e-56 | -8.615850e-47 |
| Msa0035060 | Msa0378720 | 0.811018 | 8.635639e-51 | -8.615850e-47 |
| Msa0035060 | Msa0380620 | 0.808453 | 3.073759e-50 | -8.615850e-47 |
| Msa0035060 | Msa0428370 | 0.809610 | 1.737626e-50 | -8.615850e-47 |
| Msa0035060 | Msa0430260 | 0.813445 | 2.549979e-51 | -8.615850e-47 |
| Msa0035060 | Msa0436910 | 0.830923 | 2.234070e-55 | -8.615850e-47 |
| Msa0035060 | Msa0474730 | 0.825859 | 3.725067e-54 | -8.615850e-47 |
| Msa0035060 | Msa0476650 | 0.813062 | 3.095987e-51 | -8.615850e-47 |
| Msa0035060 | Msa0519750 | 0.827865 | 1.235574e-54 | -8.615850e-47 |
| Msa0035060 | Msa0519820 | 0.814835 | 1.258037e-51 | -8.615850e-47 |
| Msa0035060 | Msa0519830 | 0.835019 | 2.141218e-56 | -8.615850e-47 |
| Msa0035060 | Msa0529030 | 0.845434 | 4.070838e-59 | -8.615850e-47 |
| Msa0035060 | Msa0534720 | 0.835447 | 1.668868e-56 | -8.615850e-47 |
| Msa0035060 | Msa0571290 | 0.802555 | 5.308053e-49 | -8.615850e-47 |
| Msa0035060 | Msa0574050 | 0.818044 | 2.407396e-52 | -8.615850e-47 |
| Msa0035060 | Msa0580370 | 0.825432 | 4.702014e-54 | -8.615850e-47 |
| Msa0035060 | Msa0581470 | 0.809664 | 1.692126e-50 | -8.615850e-47 |
| Msa0035060 | Msa0583360 | -0.811347 | 7.326646e-51 | -8.615850e-47 |
| Msa0035060 | Msa0587620 | 0.821926 | 3.113971e-53 | -8.615850e-47 |
| Msa0035060 | Msa0590830 | 0.814511 | 1.484148e-51 | -8.615850e-47 |
| Msa0035060 | Msa0611210 | 0.852358 | 4.864911e-61 | -8.615850e-47 |
| Msa0035060 | Msa0624900 | 0.825725 | 4.008637e-54 | -8.615850e-47 |
| Msa0035060 | Msa0626450 | 0.812374 | 4.378062e-51 | -8.615850e-47 |
| Msa0035060 | Msa0626490 | 0.808358 | 3.220554e-50 | -8.615850e-47 |
| Msa0035060 | Msa0651550 | 0.862389 | 5.244952e-64 | -8.615850e-47 |
| Msa0035060 | Msa0664600 | 0.806349 | 8.590389e-50 | -8.615850e-47 |
| Msa0035060 | Msa0670100 | 0.820667 | 6.078206e-53 | -8.615850e-47 |
| Msa0035060 | Msa0674480 | 0.808095 | 3.664894e-50 | -8.615850e-47 |
| Msa0035060 | Msa0693890 | 0.817137 | 3.854038e-52 | -8.615850e-47 |
| Msa0035060 | Msa0700460 | 0.818678 | 1.728890e-52 | -8.615850e-47 |
| Msa0035060 | Msa0704410 | 0.811149 | 8.086590e-51 | -8.615850e-47 |
| Msa0035060 | Msa0741220 | 0.815094 | 1.102573e-51 | -8.615850e-47 |
| Msa0035060 | Msa0756490 | 0.807987 | 3.864138e-50 | -8.615850e-47 |
| Msa0035060 | Msa0761670 | 0.809908 | 1.499668e-50 | -8.615850e-47 |
| Msa0035060 | Msa0792370 | 0.828930 | 6.835592e-55 | -8.615850e-47 |
| Msa0035060 | Msa0795870 | 0.828821 | 7.262660e-55 | -8.615850e-47 |
| Msa0035060 | Msa0828970 | 0.802753 | 4.830526e-49 | -8.615850e-47 |
| Msa0035060 | Msa0829300 | 0.839216 | 1.809227e-57 | -8.615850e-47 |
| Msa0035060 | Msa0829330 | 0.836797 | 7.579041e-57 | -8.615850e-47 |
| Msa0035060 | Msa0833650 | 0.824089 | 9.747572e-54 | -8.615850e-47 |
| Msa0035060 | Msa0894400 | 0.811471 | 6.885822e-51 | -8.615850e-47 |
| Msa0035060 | Msa0902510 | 0.809230 | 2.097301e-50 | -8.615850e-47 |
| Msa0035060 | Msa0967870 | 0.847539 | 1.084783e-59 | -8.615850e-47 |
| Msa0035060 | Msa1019430 | 0.815726 | 7.977193e-52 | -8.615850e-47 |
| Msa0035060 | Msa1019470 | 0.811763 | 5.949570e-51 | -8.615850e-47 |
| Msa0035060 | Msa1020480 | 0.802274 | 6.064356e-49 | -8.615850e-47 |
| Msa0035060 | Msa1020510 | 0.805249 | 1.462555e-49 | -8.615850e-47 |
| Msa0035060 | Msa1021590 | 0.821609 | 3.686125e-53 | -8.615850e-47 |
| Msa0035060 | Msa1044680 | 0.833876 | 4.144278e-56 | -8.615850e-47 |
| Msa0035060 | Msa1064370 | 0.800602 | 1.334214e-48 | -8.615850e-47 |
| Msa0035060 | Msa1072940 | 0.819224 | 1.299451e-52 | -8.615850e-47 |
| Msa0035060 | Msa1090140 | 0.804150 | 2.480580e-49 | -8.615850e-47 |
| Msa0035060 | Msa1105640 | 0.819964 | 8.805881e-53 | -8.615850e-47 |
| Msa0035060 | Msa1132840 | 0.827264 | 1.722512e-54 | -8.615850e-47 |
| Msa0035060 | Msa1140220 | 0.805372 | 1.377890e-49 | -8.615850e-47 |
| Msa0035060 | Msa1145810 | 0.805650 | 1.205164e-49 | -8.615850e-47 |
| Msa0035060 | Msa1148960 | 0.817749 | 2.806672e-52 | -8.615850e-47 |
| Msa0035060 | Msa1155170 | -0.827431 | 1.570300e-54 | -8.615850e-47 |
| Msa0035060 | Msa1160920 | 0.816919 | 4.313826e-52 | -8.615850e-47 |
| Msa0035060 | Msa1186020 | 0.840873 | 6.688215e-58 | -8.615850e-47 |
| Msa0035060 | Msa1192880 | 0.823500 | 1.339558e-53 | -8.615850e-47 |
| Msa0035060 | Msa1193170 | 0.800884 | 1.168596e-48 | -8.615850e-47 |
| Msa0035060 | Msa1206460 | 0.809308 | 2.017488e-50 | -8.615850e-47 |
| Msa0035060 | Msa1208950 | 0.830744 | 2.471094e-55 | -8.615850e-47 |
| Msa0035060 | Msa1225860 | -0.816152 | 6.408614e-52 | -8.615850e-47 |
| Msa0035060 | Msa1228200 | 0.818642 | 1.761791e-52 | -8.615850e-47 |
| Msa0035060 | Msa1228870 | 0.827783 | 1.292904e-54 | -8.615850e-47 |
| Msa0035060 | Msa1265650 | 0.828831 | 7.225552e-55 | -8.615850e-47 |
| Msa0035060 | Msa1271270 | 0.816665 | 4.919747e-52 | -8.615850e-47 |
| Msa0035060 | Msa1277220 | 0.801797 | 7.600010e-49 | -8.615850e-47 |
| Msa0035060 | Msa1297230 | 0.842384 | 2.672820e-58 | -8.615850e-47 |
| Msa0035060 | Msa1298220 | 0.803212 | 3.882925e-49 | -8.615850e-47 |
| Msa0035060 | Msa1303560 | 0.830437 | 2.937590e-55 | -8.615850e-47 |
| Msa0035060 | Msa1303650 | 0.833124 | 6.384098e-56 | -8.615850e-47 |
| Msa0035060 | Msa1321340 | 0.801788 | 7.630624e-49 | -8.615850e-47 |
| Msa0035060 | Msa1343180 | 0.809397 | 1.931321e-50 | -8.615850e-47 |
| Msa0035060 | Msa1343430 | 0.843014 | 1.817977e-58 | -8.615850e-47 |
| Msa0035060 | Msa1347310 | 0.814485 | 1.504097e-51 | -8.615850e-47 |
| Msa0035060 | Msa1372040 | 0.847249 | 1.303172e-59 | -8.615850e-47 |
| Msa0035060 | Msa1390440 | 0.826289 | 2.943805e-54 | -8.615850e-47 |
| Msa0035060 | Msa1392580 | 0.807727 | 4.388796e-50 | -8.615850e-47 |
| Msa0035060 | Msa1393570 | 0.804587 | 2.010877e-49 | -8.615850e-47 |
| Msa0035060 | Msa1405460 | 0.843151 | 1.671206e-58 | -8.615850e-47 |
| Msa0035060 | Msa1427100 | 0.825754 | 3.944766e-54 | -8.615850e-47 |
| Msa0035060 | Msa1440960 | 0.802184 | 6.329329e-49 | -8.615850e-47 |
| Msa0035060 | Msa1454140 | 0.829275 | 5.638510e-55 | -8.615850e-47 |
| Msa0035060 | Msa1464810 | 0.802450 | 5.579544e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0035060 | MtrunA17_Chr1g0193841 | 93.585 | 795 | 28 | 3 | 1 | 793 | 1 | 774 | 0.0 | 1498 |
| Msa0035060 | MtrunA17_Chr6g0470281 | 91.667 | 36 | 2 | 1 | 14 | 48 | 1 | 36 | 1.51e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0035060 | AT2G46980.6 | 30.741 | 823 | 475 | 26 | 14 | 790 | 1 | 774 | 1.07e-70 | 248 |
| Msa0035060 | AT2G46980.3 | 30.872 | 826 | 474 | 27 | 14 | 793 | 1 | 775 | 1.96e-70 | 248 |
| Msa0035060 | AT2G46980.2 | 30.834 | 827 | 476 | 27 | 14 | 793 | 1 | 778 | 2.11e-70 | 248 |
| Msa0035060 | AT2G46980.5 | 30.341 | 791 | 456 | 26 | 14 | 758 | 1 | 742 | 2.98e-61 | 221 |
| Msa0035060 | AT2G46980.4 | 29.784 | 742 | 442 | 26 | 14 | 704 | 1 | 714 | 2.13e-48 | 183 |
| Msa0035060 | AT2G46980.1 | 27.824 | 478 | 310 | 15 | 14 | 472 | 1 | 462 | 1.99e-23 | 105 |
Find 201 sgRNAs with CRISPR-Local
Find 486 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGGAAGACGCTTTCTTTC+TGG | 0.070190 | 1_1:-63076039 | None:intergenic |
| TATCCTTTCCCTGTTGCTTC+TGG | 0.126696 | 1_1:-63076058 | None:intergenic |
| GTAAGTAGCTTCACTTAAAA+AGG | 0.143347 | 1_1:-63081691 | None:intergenic |
| GCTAGTTTACTGGTCTCTTC+TGG | 0.176822 | 1_1:+63075531 | Msa0035060:CDS |
| GAGGTTACCCTTTCTGTATT+TGG | 0.210745 | 1_1:-63075354 | None:intergenic |
| TATTGACATCATTTGCCTTT+TGG | 0.217310 | 1_1:-63076616 | None:intergenic |
| TAACAAAATCATTTCTCTTC+TGG | 0.219693 | 1_1:-63075932 | None:intergenic |
| CAAGAACCCTCCACCGCTTT+TGG | 0.222957 | 1_1:-63075459 | None:intergenic |
| TACATTATCAGGTCAGTTAA+TGG | 0.265489 | 1_1:+63074755 | Msa0035060:intron |
| AATAATTACAAGAAGTTTGA+TGG | 0.270856 | 1_1:+63075636 | Msa0035060:CDS |
| GTTGATATTTCCCATCTTAG+AGG | 0.277065 | 1_1:-63075373 | None:intergenic |
| GAGCCTGAATCCTGAGTCTT+AGG | 0.277672 | 1_1:-63075858 | None:intergenic |
| CTCTGCCTCTCTGGAAATTA+TGG | 0.279679 | 1_1:-63076087 | None:intergenic |
| ATTCAGTTTGTTCTTAAGTT+TGG | 0.281747 | 1_1:-63078299 | None:intergenic |
| TCCCCTAAGACTCAGGATTC+AGG | 0.289814 | 1_1:+63075855 | Msa0035060:CDS |
| TGTTCCCTTGTTGTGAAGTT+TGG | 0.292251 | 1_1:-63076713 | None:intergenic |
| AAGAAGTGGTCCCCAATATT+TGG | 0.292955 | 1_1:-63075833 | None:intergenic |
| CTAGTTTACTGGTCTCTTCT+GGG | 0.293971 | 1_1:+63075532 | Msa0035060:CDS |
| TATGAATGACTGTCGGAGTA+TGG | 0.302920 | 1_1:+63075224 | Msa0035060:CDS |
| GATGAAGCTATGCCAAATAT+TGG | 0.305789 | 1_1:+63075821 | Msa0035060:CDS |
| CATAGAAAATCTTGGTCTTT+CGG | 0.311086 | 1_1:-63076651 | None:intergenic |
| CGCGCTTCAGTATCCATTGT+TGG | 0.326453 | 1_1:-63074811 | None:intergenic |
| CAGGAAAAGAGTTCCAAAAT+AGG | 0.331447 | 1_1:+63076212 | Msa0035060:CDS |
| CAACAAAACCGCTAGTTTAC+TGG | 0.332384 | 1_1:+63075521 | Msa0035060:CDS |
| ATCCTTTCCCTGTTGCTTCT+GGG | 0.332749 | 1_1:-63076057 | None:intergenic |
| ATGAAGCTATGCCAAATATT+GGG | 0.336677 | 1_1:+63075822 | Msa0035060:CDS |
| TCCGCTAAAGAGAAGCAAAT+TGG | 0.336973 | 1_1:+63075432 | Msa0035060:CDS |
| TTTGAAAGAGGGTATCTAAA+TGG | 0.337525 | 1_1:+63081541 | Msa0035060:CDS |
| GGCTGTTGAACTGTTCGCTT+TGG | 0.345466 | 1_1:+63078270 | Msa0035060:CDS |
| TGGTACCAGTGCCAAGAATA+TGG | 0.345509 | 1_1:-63081631 | None:intergenic |
| GTCCTGACCATACTCGTAAA+AGG | 0.348510 | 1_1:+63075997 | Msa0035060:CDS |
| GCAGATCAGATAGAGATAAA+AGG | 0.348735 | 1_1:+63079576 | Msa0035060:CDS |
| CGTACAAGTCTGTTTCAATC+TGG | 0.350247 | 1_1:-63078402 | None:intergenic |
| AATAAAATGGGAGGATTTAG+TGG | 0.350584 | 1_1:+63076341 | Msa0035060:CDS |
| TTATCAGTCTCAAAGACTTT+TGG | 0.353056 | 1_1:-63075744 | None:intergenic |
| TTTATTTGTGGTATCACTTT+CGG | 0.357386 | 1_1:-63076255 | None:intergenic |
| GCCATAAAAGTGCTTAAATT+AGG | 0.357455 | 1_1:-63076683 | None:intergenic |
| CATGGAAAAGGGTGTGGAGC+TGG | 0.358563 | 1_1:+63075573 | Msa0035060:CDS |
| AAAGGCCAGTCACTCGTTCT+AGG | 0.359424 | 1_1:+63076015 | Msa0035060:CDS |
| CAAAAGCGGTGGAGGGTTCT+TGG | 0.361931 | 1_1:+63075460 | Msa0035060:CDS |
| TTTGGTGTGTCTTTGGTGTT+GGG | 0.362181 | 1_1:-63076598 | None:intergenic |
| CTTAGGTCCGCTTCTTGAGC+TGG | 0.365048 | 1_1:-63075310 | None:intergenic |
| GAAAATTTCCATAGGAGTTA+TGG | 0.365064 | 1_1:+63075275 | Msa0035060:CDS |
| CGGTGGAATGAGAAATTGAA+TGG | 0.376906 | 1_1:-63074242 | None:intergenic |
| TCCAATTTGCTTCTCTTTAG+CGG | 0.379522 | 1_1:-63075433 | None:intergenic |
| TATAACGATGTGTTTGAAAG+AGG | 0.379716 | 1_1:+63081529 | Msa0035060:CDS |
| AGGAAAAGAGTTCCAAAATA+GGG | 0.383061 | 1_1:+63076213 | Msa0035060:CDS |
| CTTGGTCTTTCGGTTGATGC+TGG | 0.383100 | 1_1:-63076641 | None:intergenic |
| ACAGGTCCATCCCCTTTCTT+AGG | 0.383656 | 1_1:-63075327 | None:intergenic |
| AGCAAAGTTTGTAACTTGTA+AGG | 0.384377 | 1_1:-63081582 | None:intergenic |
| CAGAAATAGTTCTACACTCT+TGG | 0.384925 | 1_1:-63076493 | None:intergenic |
| TTGATGCTTCTCTGCCTCTC+TGG | 0.387482 | 1_1:-63076096 | None:intergenic |
| TGAACTGTTCGCTTTGGAAT+TGG | 0.390072 | 1_1:+63078276 | Msa0035060:CDS |
| AACTTCTTGTAATTATTAGA+AGG | 0.396004 | 1_1:-63075630 | None:intergenic |
| ATTTATTATTCGTTATTTGC+AGG | 0.396041 | 1_1:+63081762 | Msa0035060:three_prime_UTR |
| AGCGTCTTCCCAGAAGCAAC+AGG | 0.406329 | 1_1:+63076049 | Msa0035060:CDS |
| GTTGGAATTAATTGACAGTA+AGG | 0.411256 | 1_1:+63082000 | Msa0035060:three_prime_UTR |
| GACACTGAAGAACCATCATT+TGG | 0.413292 | 1_1:-63076173 | None:intergenic |
| CGATTCTGCCATAACTCCTA+TGG | 0.413670 | 1_1:-63075283 | None:intergenic |
| TGTGTCTTTGGTGTTGGGCT+AGG | 0.418778 | 1_1:-63076593 | None:intergenic |
| ATGGAAAAGGGTGTGGAGCT+GGG | 0.430586 | 1_1:+63075574 | Msa0035060:CDS |
| AAAAGGCTGTGCAAACATAA+AGG | 0.434348 | 1_1:+63077934 | Msa0035060:CDS |
| TATTGTTTGCTGTTTGTGTT+GGG | 0.435133 | 1_1:-63076430 | None:intergenic |
| AGGATGGGAGTGCTGAAGAA+AGG | 0.441359 | 1_1:+63075694 | Msa0035060:CDS |
| GGATGGGAGTGCTGAAGAAA+GGG | 0.442715 | 1_1:+63075695 | Msa0035060:CDS |
| AAGAATATGGAGAAAATCAA+TGG | 0.447263 | 1_1:-63081618 | None:intergenic |
| AACACCAAAGACACACCAAA+AGG | 0.447325 | 1_1:+63076601 | Msa0035060:CDS |
| GTATTGTTTGCTGTTTGTGT+TGG | 0.448414 | 1_1:-63076431 | None:intergenic |
| TGATGATTTGCCTCTGTAGT+AGG | 0.451423 | 1_1:-63075495 | None:intergenic |
| AAGGATGAGCCTCATGGAAA+AGG | 0.452185 | 1_1:+63075561 | Msa0035060:CDS |
| TTGAAATTCATCTTGCGACT+TGG | 0.452911 | 1_1:-63076531 | None:intergenic |
| CCAAACCTTGACGACGTCCT+TGG | 0.457455 | 1_1:-63076959 | None:intergenic |
| ACTGTTAGTATGTCTTGCTT+TGG | 0.457614 | 1_1:+63081906 | Msa0035060:three_prime_UTR |
| TTACACTTAAACCTGTCAAA+AGG | 0.457973 | 1_1:+63077917 | Msa0035060:CDS |
| AGAAAGGGTAACCTCTAAGA+TGG | 0.458911 | 1_1:+63075362 | Msa0035060:CDS |
| TTTCTCCATATTCTTGGCAC+TGG | 0.460207 | 1_1:+63081626 | Msa0035060:three_prime_UTR |
| TTAATCTCAGCTGTTTCTGC+TGG | 0.464220 | 1_1:-63079482 | None:intergenic |
| AAGTACGTGGAAAACTCTAA+TGG | 0.466229 | 1_1:-63081651 | None:intergenic |
| CTCTAGAAAGAAGGGAAAGA+AGG | 0.469135 | 1_1:+63075674 | Msa0035060:CDS |
| GGTGTCTTAAATTGAAATGT+AGG | 0.471164 | 1_1:-63076557 | None:intergenic |
| TCAATAAATCAAAGAGAAAA+CGG | 0.473721 | 1_1:+63078527 | Msa0035060:CDS |
| TTTATTCCCAAGTGAAAATG+AGG | 0.474158 | 1_1:-63076324 | None:intergenic |
| CGGATAGAAACAAGATTTGA+AGG | 0.475394 | 1_1:+63078547 | Msa0035060:CDS |
| ACGAATAATAAATCCAGGAT+TGG | 0.476589 | 1_1:-63081752 | None:intergenic |
| CACTTCTTCCCCTAAGACTC+AGG | 0.478895 | 1_1:+63075848 | Msa0035060:CDS |
| CAGTGGTGGATCAGTCTTTG+AGG | 0.483394 | 1_1:-63076291 | None:intergenic |
| ATCATCAGATTCATCATATG+AGG | 0.484156 | 1_1:+63076926 | Msa0035060:CDS |
| AGCCTGAATCCTGAGTCTTA+GGG | 0.484557 | 1_1:-63075857 | None:intergenic |
| TAGCAGAAGCTCTAGAAAGA+AGG | 0.485858 | 1_1:+63075665 | Msa0035060:CDS |
| GGGAATGAACATCCTGCAGC+TGG | 0.491861 | 1_1:-63078381 | None:intergenic |
| AAACATCTCATTTGTTCGAA+GGG | 0.494130 | 1_1:+63081796 | Msa0035060:three_prime_UTR |
| ATGGTCCTCATAGAAAATCT+TGG | 0.494427 | 1_1:-63076659 | None:intergenic |
| AGCAGAAGCTCTAGAAAGAA+GGG | 0.495837 | 1_1:+63075666 | Msa0035060:CDS |
| GAAACATCTCATTTGTTCGA+AGG | 0.497039 | 1_1:+63081795 | Msa0035060:three_prime_UTR |
| GGAAAAGAGTTCCAAAATAG+GGG | 0.502193 | 1_1:+63076214 | Msa0035060:CDS |
| TGGAGGTCCAAAAGCGGTGG+AGG | 0.503297 | 1_1:+63075452 | Msa0035060:CDS |
| TCAAGAAGCGGACCTAAGAA+AGG | 0.503551 | 1_1:+63075315 | Msa0035060:CDS |
| AAAACAGTACAGAAAATTTG+AGG | 0.505203 | 1_1:+63075799 | Msa0035060:CDS |
| CAGTGCTTCTGCAGTCCTGT+AGG | 0.507098 | 1_1:-63079539 | None:intergenic |
| CTTTCTGTATTTGGCACGAC+AGG | 0.508106 | 1_1:-63075345 | None:intergenic |
| GAAAGAAGGGAAAGAAGGAT+GGG | 0.509221 | 1_1:+63075679 | Msa0035060:CDS |
| CGAGTTCCAGTCTCCAATCC+TGG | 0.511632 | 1_1:+63081739 | Msa0035060:three_prime_UTR |
| CAAGAAGCGGACCTAAGAAA+GGG | 0.512363 | 1_1:+63075316 | Msa0035060:CDS |
| AGAGGTTAATCTACACCTAC+AGG | 0.513006 | 1_1:+63079524 | Msa0035060:CDS |
| GGAGAAAGAGACAGAAGAGC+AGG | 0.515117 | 1_1:+63076899 | Msa0035060:CDS |
| TTTATTATTCGTTATTTGCA+GGG | 0.516948 | 1_1:+63081763 | Msa0035060:three_prime_UTR |
| GATAGAAGAAAGCGATTCGA+TGG | 0.518108 | 1_1:+63078098 | Msa0035060:CDS |
| GGGAAGAAGGATGAGCCTCA+TGG | 0.521134 | 1_1:+63075555 | Msa0035060:CDS |
| ACTGATCCACCACTGTATGC+AGG | 0.522412 | 1_1:+63076299 | Msa0035060:CDS |
| AGACATACATTTCCAGCTGC+AGG | 0.524462 | 1_1:+63078369 | Msa0035060:CDS |
| AGAAAGAAGGGAAAGAAGGA+TGG | 0.524935 | 1_1:+63075678 | Msa0035060:CDS |
| ATTAATCTACGATAGATTCA+AGG | 0.527030 | 1_1:+63079500 | Msa0035060:CDS |
| AGGATGAGCCTCATGGAAAA+GGG | 0.527549 | 1_1:+63075562 | Msa0035060:CDS |
| GCTTCTGAACAGACTCAAGA+TGG | 0.527585 | 1_1:+63078126 | Msa0035060:CDS |
| ATAACGATGTGTTTGAAAGA+GGG | 0.527824 | 1_1:+63081530 | Msa0035060:CDS |
| GAAAATTACATCCACACAGC+AGG | 0.527992 | 1_1:+63080599 | Msa0035060:CDS |
| GCAGCTTCAGTGTCTTCAAA+AGG | 0.529876 | 1_1:+63077979 | Msa0035060:CDS |
| GTACAAGTCTGTTTCAATCT+GGG | 0.531874 | 1_1:-63078401 | None:intergenic |
| TTTCTCTTCTGGTTCAAGTG+TGG | 0.531914 | 1_1:-63075921 | None:intergenic |
| AGACTCAAGATGGATTTGTC+AGG | 0.533145 | 1_1:+63078136 | Msa0035060:CDS |
| ACCTAAAGAAAAGATTAAAG+TGG | 0.533212 | 1_1:-63081947 | None:intergenic |
| TAGTTTACTGGTCTCTTCTG+GGG | 0.536940 | 1_1:+63075533 | Msa0035060:CDS |
| ATGAATGACTGTCGGAGTAT+GGG | 0.537659 | 1_1:+63075225 | Msa0035060:CDS |
| TTCCCAGAAGCAACAGGGAA+AGG | 0.538059 | 1_1:+63076055 | Msa0035060:CDS |
| GAGTGCTGAAGAAAGGGTAG+AGG | 0.538673 | 1_1:+63075701 | Msa0035060:CDS |
| GAGCCTCATGGAAAAGGGTG+TGG | 0.539371 | 1_1:+63075567 | Msa0035060:CDS |
| AGAATATGGAGAAAATCAAT+GGG | 0.541852 | 1_1:-63081617 | None:intergenic |
| TGGAAAAGGGTGTGGAGCTG+GGG | 0.543038 | 1_1:+63075575 | Msa0035060:CDS |
| AGTTTACTGGTCTCTTCTGG+GGG | 0.543781 | 1_1:+63075534 | Msa0035060:CDS |
| ATAAATCCAGGATTGGAGAC+TGG | 0.544645 | 1_1:-63081745 | None:intergenic |
| GGAGAAAGCAAGGCTGTAGG+AGG | 0.544746 | 1_1:+63075399 | Msa0035060:CDS |
| GGGCTAGGAGAGCTCAAAGT+AGG | 0.545743 | 1_1:-63076578 | None:intergenic |
| GTCTTGATGAAGTTTATTTG+TGG | 0.548101 | 1_1:-63076267 | None:intergenic |
| AAATAACGAATAATAAATCC+AGG | 0.548657 | 1_1:-63081757 | None:intergenic |
| CGCTGGCTGTAAACCAACAA+TGG | 0.548733 | 1_1:+63074798 | Msa0035060:exon |
| TTAAGTGAAGCTACTTACAA+AGG | 0.552340 | 1_1:+63081696 | Msa0035060:three_prime_UTR |
| CTGATCCACCACTGTATGCA+GGG | 0.552488 | 1_1:+63076300 | Msa0035060:CDS |
| GTCATGTTAAGAACGTCCTA+TGG | 0.552573 | 1_1:+63081845 | Msa0035060:three_prime_UTR |
| AACAGACTTCAAAATTTCTG+AGG | 0.552915 | 1_1:-63078341 | None:intergenic |
| CCTAAAGAAAAGATTAAAGT+GGG | 0.553215 | 1_1:-63081946 | None:intergenic |
| CTGGTCCTAGAACGAGTGAC+TGG | 0.560842 | 1_1:-63076020 | None:intergenic |
| CAGGATTGGAGACTGGAACT+CGG | 0.563783 | 1_1:-63081738 | None:intergenic |
| CTACGATAGATTCAAGGAAG+AGG | 0.564214 | 1_1:+63079506 | Msa0035060:CDS |
| GAAAGGGTAACCTCTAAGAT+GGG | 0.566254 | 1_1:+63075363 | Msa0035060:CDS |
| CTGTCGTGCCAAATACAGAA+AGG | 0.567724 | 1_1:+63075346 | Msa0035060:CDS |
| GTCTAAATCGCCTACTACAG+AGG | 0.568860 | 1_1:+63075485 | Msa0035060:CDS |
| CATCATTTGGAAAAGCATCT+CGG | 0.570662 | 1_1:-63076160 | None:intergenic |
| AGGCTCTCACAATTGTAAGA+AGG | 0.571813 | 1_1:+63075875 | Msa0035060:CDS |
| AGCGGACCTAAGAAAGGGGA+TGG | 0.577391 | 1_1:+63075321 | Msa0035060:CDS |
| TAATATACTTCAGCATATGA+AGG | 0.579232 | 1_1:+63076839 | Msa0035060:intron |
| GGTGATTAGTAGTGAAGCAA+TGG | 0.580201 | 1_1:+63082021 | Msa0035060:three_prime_UTR |
| TGGTTCAAGTGTGGCTTGAG+CGG | 0.586860 | 1_1:-63075912 | None:intergenic |
| CGGAGCCAAACTTCACAACA+AGG | 0.591553 | 1_1:+63076708 | Msa0035060:CDS |
| TGTCGTGCCAAATACAGAAA+GGG | 0.596262 | 1_1:+63075347 | Msa0035060:CDS |
| ATCACAAGTTGAAGAATCAG+TGG | 0.598267 | 1_1:+63080551 | Msa0035060:CDS |
| AACATCCAAGGACGTCGTCA+AGG | 0.600753 | 1_1:+63076954 | Msa0035060:CDS |
| AAAAGTGCTTAAATTAGGCA+TGG | 0.600818 | 1_1:-63076678 | None:intergenic |
| GCCTGAATCCTGAGTCTTAG+GGG | 0.602304 | 1_1:-63075856 | None:intergenic |
| CTGAGTCTTAGGGGAAGAAG+TGG | 0.603504 | 1_1:-63075847 | None:intergenic |
| ACAGGAGAAAGCAAGGCTGT+AGG | 0.607013 | 1_1:+63075396 | Msa0035060:CDS |
| TGAAGCTATGCCAAATATTG+GGG | 0.607934 | 1_1:+63075823 | Msa0035060:CDS |
| ATAACAGTAAACAATTCCAT+AGG | 0.608332 | 1_1:-63081861 | None:intergenic |
| CAGTCAAGGAAAATTTCCAT+AGG | 0.608406 | 1_1:+63075267 | Msa0035060:CDS |
| TCGAAAGCCAGCTCAAGAAG+CGG | 0.608515 | 1_1:+63075303 | Msa0035060:CDS |
| TTCATCCGTCTAGCCAGTCA+AGG | 0.611059 | 1_1:+63075253 | Msa0035060:CDS |
| TTATTATTCGTTATTTGCAG+GGG | 0.611998 | 1_1:+63081764 | Msa0035060:three_prime_UTR |
| CATTGACTGCAGATGGCAAG+AGG | 0.613072 | 1_1:+63081482 | Msa0035060:intron |
| GCTAAAGAGAAGCAAATTGG+AGG | 0.615140 | 1_1:+63075435 | Msa0035060:CDS |
| TATCAACACAGGAGAAAGCA+AGG | 0.616108 | 1_1:+63075389 | Msa0035060:CDS |
| CAGATTCATCATATGAGGAG+AGG | 0.624272 | 1_1:+63076931 | Msa0035060:CDS |
| GAGAAAGCAAGGCTGTAGGA+GGG | 0.624273 | 1_1:+63075400 | Msa0035060:CDS |
| TCACTTGGGAATAAAATGGG+AGG | 0.626636 | 1_1:+63076332 | Msa0035060:CDS |
| TCTTGCTTAACTGAAATCGC+TGG | 0.629775 | 1_1:+63074781 | Msa0035060:five_prime_UTR |
| AAGCACTGTAGAAGATCTCG+AGG | 0.629833 | 1_1:+63079554 | Msa0035060:CDS |
| GGAGGTCCAAAAGCGGTGGA+GGG | 0.635123 | 1_1:+63075453 | Msa0035060:CDS |
| AAAGAGACAGAAGAGCAGGA+TGG | 0.636909 | 1_1:+63076903 | Msa0035060:CDS |
| AATTGGAGGTCCAAAAGCGG+TGG | 0.644213 | 1_1:+63075449 | Msa0035060:CDS |
| AAGATGGGAAATATCAACAC+AGG | 0.645515 | 1_1:+63075378 | Msa0035060:CDS |
| AGATCAGCGTGTAGAACATG+AGG | 0.645710 | 1_1:+63076454 | Msa0035060:CDS |
| ACTTCACGAATATCAGAGCA+AGG | 0.649861 | 1_1:+63074291 | Msa0035060:five_prime_UTR |
| ACAAATACTTGCCTGCTGTG+TGG | 0.658445 | 1_1:-63080610 | None:intergenic |
| AGGAGCATATGAATGACTGT+CGG | 0.659937 | 1_1:+63075217 | Msa0035060:intron |
| AAGCAAGACATACTAACAGT+GGG | 0.660377 | 1_1:-63081903 | None:intergenic |
| CTTTGAGACTGATAAAACAA+AGG | 0.660586 | 1_1:+63075752 | Msa0035060:CDS |
| GTTTACTGGTCTCTTCTGGG+GGG | 0.661618 | 1_1:+63075535 | Msa0035060:CDS |
| GAGGCCCCTGCATACAGTGG+TGG | 0.661891 | 1_1:-63076305 | None:intergenic |
| AAAGCAAGACATACTAACAG+TGG | 0.662620 | 1_1:-63081904 | None:intergenic |
| GAAAAGAGTTCCAAAATAGG+GGG | 0.663528 | 1_1:+63076215 | Msa0035060:CDS |
| TCACAATTGTAAGAAGGACA+AGG | 0.670048 | 1_1:+63075881 | Msa0035060:CDS |
| GCGTCTTCCCAGAAGCAACA+GGG | 0.671850 | 1_1:+63076050 | Msa0035060:CDS |
| TATGAGGAGAGGAACATCCA+AGG | 0.676146 | 1_1:+63076942 | Msa0035060:CDS |
| AAGAAGCGGACCTAAGAAAG+GGG | 0.681515 | 1_1:+63075317 | Msa0035060:CDS |
| GCAAATTGGAGGTCCAAAAG+CGG | 0.688099 | 1_1:+63075446 | Msa0035060:CDS |
| GAGAAAAGCATACTGCTGAG+AGG | 0.688403 | 1_1:+63077887 | Msa0035060:CDS |
| TGATCCACCACTGTATGCAG+GGG | 0.689823 | 1_1:+63076301 | Msa0035060:CDS |
| AAGTACCATAATTTCCAGAG+AGG | 0.694398 | 1_1:+63076082 | Msa0035060:CDS |
| GGAGCCAAACTTCACAACAA+GGG | 0.697242 | 1_1:+63076709 | Msa0035060:CDS |
| AGAAGAGACCAGTAAACTAG+CGG | 0.707964 | 1_1:-63075529 | None:intergenic |
| GAATGAGAAATTGAATGGAG+TGG | 0.715184 | 1_1:-63074237 | None:intergenic |
| AATGAGGCCCCTGCATACAG+TGG | 0.725322 | 1_1:-63076308 | None:intergenic |
| CAACAATGGATACTGAAGCG+CGG | 0.729741 | 1_1:+63074812 | Msa0035060:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAAAAAAAAAAAAAAAA+GGG | - | chr1_1:63081395-63081414 | None:intergenic | 0.0% |
| !! | ATATAAAAAAAAAAAAAAAA+AGG | - | chr1_1:63081396-63081415 | None:intergenic | 0.0% |
| !! | AAATTATATTAAGATATTCA+TGG | + | chr1_1:63075177-63075196 | Msa0035060:intron | 10.0% |
| !! | TTAAATTCTTAGAATATATT+AGG | + | chr1_1:63078859-63078878 | Msa0035060:intron | 10.0% |
| !!! | TAAATTTGATTATTTTTTGT+TGG | + | chr1_1:63081982-63082001 | Msa0035060:three_prime_UTR | 10.0% |
| !! | TGAAATTACTTACTAAAATT+TGG | + | chr1_1:63074728-63074747 | Msa0035060:intron | 15.0% |
| !! | AAGTCAAATAGTATATATAA+AGG | - | chr1_1:63077828-63077847 | None:intergenic | 15.0% |
| !!! | GTGTTTTTATTTAACTAATA+TGG | + | chr1_1:63078609-63078628 | Msa0035060:intron | 15.0% |
| !! | TTTGGAAATAGAATTTAAAA+GGG | - | chr1_1:63078667-63078686 | None:intergenic | 15.0% |
| !!! | TTTTGGAAATAGAATTTAAA+AGG | - | chr1_1:63078668-63078687 | None:intergenic | 15.0% |
| !!! | ATTTTACACTTAATATTCTT+TGG | + | chr1_1:63078719-63078738 | Msa0035060:intron | 15.0% |
| !! | TATATTTAAACTGTATAGTT+CGG | + | chr1_1:63079017-63079036 | Msa0035060:intron | 15.0% |
| !!! | TCTTTATTTACACATAAAAA+CGG | - | chr1_1:63080252-63080271 | None:intergenic | 15.0% |
| !! | TGTTTATCTGAATAAATTAA+TGG | + | chr1_1:63080703-63080722 | Msa0035060:intron | 15.0% |
| !! | CTATTTATTATGTACTTATA+GGG | + | chr1_1:63080996-63081015 | Msa0035060:intron | 15.0% |
| !! | AAAATTGTGTCAATTAAATT+GGG | - | chr1_1:63081203-63081222 | None:intergenic | 15.0% |
| !!! | ATATTTTACTTATGATAGTC+TGG | + | chr1_1:63074917-63074936 | Msa0035060:intron | 20.0% |
| !!! | GTCATTTTTTTGAACATTAA+AGG | + | chr1_1:63075106-63075125 | Msa0035060:intron | 20.0% |
| !! | AACTTCTTGTAATTATTAGA+AGG | - | chr1_1:63075633-63075652 | None:intergenic | 20.0% |
| !! | AATAATTACAAGAAGTTTGA+TGG | + | chr1_1:63075636-63075655 | Msa0035060:CDS | 20.0% |
| !!! | ATATTGTCTTTTGAAGAAAA+AGG | + | chr1_1:63076128-63076147 | Msa0035060:CDS | 20.0% |
| !!! | TATTGTCTTTTGAAGAAAAA+GGG | + | chr1_1:63076129-63076148 | Msa0035060:CDS | 20.0% |
| !! | TAAAGCAAAATACAAAAACA+CGG | - | chr1_1:63076817-63076836 | None:intergenic | 20.0% |
| !!! | TCTTGTACTTATTTTTTATC+AGG | + | chr1_1:63077053-63077072 | Msa0035060:intron | 20.0% |
| !! | ACTAAGAAAACATATTTACT+AGG | - | chr1_1:63077233-63077252 | None:intergenic | 20.0% |
| !! | TAGTAAAAGTTCCAAAAAAT+AGG | + | chr1_1:63077249-63077268 | Msa0035060:intron | 20.0% |
| !! | TTTGAAAATAATAACTGAAC+AGG | - | chr1_1:63077542-63077561 | None:intergenic | 20.0% |
| !!! | TGTTCAGTTATTATTTTCAA+AGG | + | chr1_1:63077541-63077560 | Msa0035060:intron | 20.0% |
| !! | TCAAATAGTATATATAAAGG+AGG | - | chr1_1:63077825-63077844 | None:intergenic | 20.0% |
| !! | TCAATAAATCAAAGAGAAAA+CGG | + | chr1_1:63078527-63078546 | Msa0035060:CDS | 20.0% |
| !!! | ATTTACTTTTCTCCTTTATA+AGG | - | chr1_1:63078782-63078801 | None:intergenic | 20.0% |
| !! | TTAGAATATATTAGGATGAA+GGG | + | chr1_1:63078867-63078886 | Msa0035060:intron | 20.0% |
| !! | ATATTTAAACTGTATAGTTC+GGG | + | chr1_1:63079018-63079037 | Msa0035060:intron | 20.0% |
| !! | TGAAATATTTGAATTTGTCT+TGG | - | chr1_1:63079104-63079123 | None:intergenic | 20.0% |
| !! | TATCATATTAACATGAAACT+TGG | - | chr1_1:63079147-63079166 | None:intergenic | 20.0% |
| !! | CTTAACTACTAATTTATAAC+AGG | - | chr1_1:63079814-63079833 | None:intergenic | 20.0% |
| !! | ATTACTGTATGTAAGATATA+AGG | + | chr1_1:63080155-63080174 | Msa0035060:intron | 20.0% |
| !!! | CTTTATTTACACATAAAAAC+GGG | - | chr1_1:63080251-63080270 | None:intergenic | 20.0% |
| !! | ATTATTGACAAGTATTATCT+AGG | + | chr1_1:63080469-63080488 | Msa0035060:intron | 20.0% |
| !! | TATAATTTAACACAATAGTG+TGG | - | chr1_1:63080792-63080811 | None:intergenic | 20.0% |
| !! | GCTATTTATTATGTACTTAT+AGG | + | chr1_1:63080995-63081014 | Msa0035060:intron | 20.0% |
| !!! | TAGATTTGACTTTTCTAAAA+GGG | - | chr1_1:63081079-63081098 | None:intergenic | 20.0% |
| !!! | TTAGATTTGACTTTTCTAAA+AGG | - | chr1_1:63081080-63081099 | None:intergenic | 20.0% |
| !! | AACTTTGAATTTGATATTAC+TGG | + | chr1_1:63081148-63081167 | Msa0035060:intron | 20.0% |
| !! | CAAAATTGTGTCAATTAAAT+TGG | - | chr1_1:63081204-63081223 | None:intergenic | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | + | chr1_1:63081292-63081311 | Msa0035060:intron | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | + | chr1_1:63081293-63081312 | Msa0035060:intron | 20.0% |
| !! | AAATAACGAATAATAAATCC+AGG | - | chr1_1:63081760-63081779 | None:intergenic | 20.0% |
| !! | ATTTATTATTCGTTATTTGC+AGG | + | chr1_1:63081762-63081781 | Msa0035060:three_prime_UTR | 20.0% |
| !! | TTTATTATTCGTTATTTGCA+GGG | + | chr1_1:63081763-63081782 | Msa0035060:three_prime_UTR | 20.0% |
| !!! | ATTGCCAATTTTTTTTAAAC+TGG | + | chr1_1:63081821-63081840 | Msa0035060:three_prime_UTR | 20.0% |
| !!! | TGAGAGAGATTTGAAATTTT+CGG | - | chr1_1:63074265-63074284 | None:intergenic | 25.0% |
| !!! | TTCATTTCCTCTTTTTTCTA+GGG | + | chr1_1:63074454-63074473 | Msa0035060:intron | 25.0% |
| ! | ATCATGCAAAATCATTTGAA+GGG | - | chr1_1:63074571-63074590 | None:intergenic | 25.0% |
| ! | AATCATGCAAAATCATTTGA+AGG | - | chr1_1:63074572-63074591 | None:intergenic | 25.0% |
| ! | CAAGCTTAAATCAAAATTGT+GGG | - | chr1_1:63074682-63074701 | None:intergenic | 25.0% |
| ! | TCAAGCTTAAATCAAAATTG+TGG | - | chr1_1:63074683-63074702 | None:intergenic | 25.0% |
| ! | AATTTGGTTGTTACATTATC+AGG | + | chr1_1:63074744-63074763 | Msa0035060:intron | 25.0% |
| !! | TACTAGTACTTTGTTTGATT+AGG | + | chr1_1:63074947-63074966 | Msa0035060:intron | 25.0% |
| !!! | AACATTGTTTTGATGATTTC+TGG | + | chr1_1:63074999-63075018 | Msa0035060:intron | 25.0% |
| ! | TATGTAAGTGTTAGAAACAA+AGG | + | chr1_1:63075064-63075083 | Msa0035060:intron | 25.0% |
| !!! | TTTTTTGAACATTAAAGGCT+AGG | + | chr1_1:63075111-63075130 | Msa0035060:intron | 25.0% |
| !! | TGGATTTGAACTATATTTTC+AGG | + | chr1_1:63075197-63075216 | Msa0035060:intron | 25.0% |
| ! | AAAACAGTACAGAAAATTTG+AGG | + | chr1_1:63075799-63075818 | Msa0035060:CDS | 25.0% |
| ! | TAACAAAATCATTTCTCTTC+TGG | - | chr1_1:63075935-63075954 | None:intergenic | 25.0% |
| ! | TTTATTTGTGGTATCACTTT+CGG | - | chr1_1:63076258-63076277 | None:intergenic | 25.0% |
| !! | ATTTTCACTTGGGAATAAAA+TGG | + | chr1_1:63076328-63076347 | Msa0035060:CDS | 25.0% |
| !! | TTTTCACTTGGGAATAAAAT+GGG | + | chr1_1:63076329-63076348 | Msa0035060:CDS | 25.0% |
| !!! | TTGGGTATAATTCTTTTTTG+TGG | - | chr1_1:63076415-63076434 | None:intergenic | 25.0% |
| ! | CTTGAAACACTAGAATAATA+AGG | - | chr1_1:63076756-63076775 | None:intergenic | 25.0% |
| ! | TAATATACTTCAGCATATGA+AGG | + | chr1_1:63076839-63076858 | Msa0035060:intron | 25.0% |
| ! | TCATAGAAAAGAAAAATCTC+TGG | + | chr1_1:63076878-63076897 | Msa0035060:CDS | 25.0% |
| !!! | TGTACTTATTTTTTATCAGG+CGG | + | chr1_1:63077056-63077075 | Msa0035060:intron | 25.0% |
| !!! | TTTTGAAGAACATACAAGAT+TGG | - | chr1_1:63077193-63077212 | None:intergenic | 25.0% |
| !!! | ATGTTAGAAAGCCTATTTTT+TGG | - | chr1_1:63077263-63077282 | None:intergenic | 25.0% |
| ! | CATGATTGGAAATAATTACT+TGG | + | chr1_1:63077346-63077365 | Msa0035060:intron | 25.0% |
| !!! | TTAGCTTTTAATGCATTTTC+TGG | + | chr1_1:63077753-63077772 | Msa0035060:intron | 25.0% |
| ! | TTAACTTTAGTTGCAATATC+AGG | + | chr1_1:63077777-63077796 | Msa0035060:intron | 25.0% |
| ! | TAACTTTAGTTGCAATATCA+GGG | + | chr1_1:63077778-63077797 | Msa0035060:intron | 25.0% |
| ! | GTTTGAAGATTAAATACATC+AGG | - | chr1_1:63078051-63078070 | None:intergenic | 25.0% |
| !! | ATTCAGTTTGTTCTTAAGTT+TGG | - | chr1_1:63078302-63078321 | None:intergenic | 25.0% |
| ! | TCTGAAAAAAAATGTTTCAG+AGG | + | chr1_1:63078490-63078509 | Msa0035060:intron | 25.0% |
| ! | TTTAAAAGGGAGATATGAAA+AGG | - | chr1_1:63078654-63078673 | None:intergenic | 25.0% |
| ! | CTTAGAATATATTAGGATGA+AGG | + | chr1_1:63078866-63078885 | Msa0035060:intron | 25.0% |
| !! | ATTCAGCATTATTGTTCTTT+TGG | + | chr1_1:63078909-63078928 | Msa0035060:intron | 25.0% |
| !!! | TTGGTTCACTTAATTTGTTT+TGG | + | chr1_1:63078940-63078959 | Msa0035060:intron | 25.0% |
| ! | ATGACAAATGCTATTAAGAA+AGG | - | chr1_1:63079369-63079388 | None:intergenic | 25.0% |
| !! | TTTTTGTTAAGAGGAATAGA+AGG | - | chr1_1:63079456-63079475 | None:intergenic | 25.0% |
| ! | ATTAATCTACGATAGATTCA+AGG | + | chr1_1:63079500-63079519 | Msa0035060:CDS | 25.0% |
| !!! | TTTCATACTTTGCTTTTCAA+GGG | - | chr1_1:63079604-63079623 | None:intergenic | 25.0% |
| !!! | TTTTCATACTTTGCTTTTCA+AGG | - | chr1_1:63079605-63079624 | None:intergenic | 25.0% |
| ! | AAAAGCAAAGTATGAAAACT+CGG | + | chr1_1:63079607-63079626 | Msa0035060:intron | 25.0% |
| ! | TAACAAACAAAAATTTCTGC+GGG | - | chr1_1:63079852-63079871 | None:intergenic | 25.0% |
| ! | CTAACAAACAAAAATTTCTG+CGG | - | chr1_1:63079853-63079872 | None:intergenic | 25.0% |
| ! | TATAACCTAATACAGCTTAA+CGG | - | chr1_1:63080105-63080124 | None:intergenic | 25.0% |
| ! | ATACTTGTCAATAATGCAAA+TGG | - | chr1_1:63080464-63080483 | None:intergenic | 25.0% |
| ! | GAATATATCCTATGTATTGT+AGG | + | chr1_1:63080507-63080526 | Msa0035060:intron | 25.0% |
| !!! | TGGATTAGCATTTTTTTTTC+TGG | - | chr1_1:63080865-63080884 | None:intergenic | 25.0% |
| ! | AGAATATGGAGAAAATCAAT+GGG | - | chr1_1:63081620-63081639 | None:intergenic | 25.0% |
| ! | AAGAATATGGAGAAAATCAA+TGG | - | chr1_1:63081621-63081640 | None:intergenic | 25.0% |
| !!! | ATTGATTTTCTCCATATTCT+TGG | + | chr1_1:63081620-63081639 | Msa0035060:three_prime_UTR | 25.0% |
| ! | TAAGTAGCTTCACTTAAAAA+GGG | - | chr1_1:63081693-63081712 | None:intergenic | 25.0% |
| ! | TTATTATTCGTTATTTGCAG+GGG | + | chr1_1:63081764-63081783 | Msa0035060:three_prime_UTR | 25.0% |
| ! | GACACCAGTTTAAAAAAAAT+TGG | - | chr1_1:63081828-63081847 | None:intergenic | 25.0% |
| ! | ATAACAGTAAACAATTCCAT+AGG | - | chr1_1:63081864-63081883 | None:intergenic | 25.0% |
| ! | CCTAAAGAAAAGATTAAAGT+GGG | - | chr1_1:63081949-63081968 | None:intergenic | 25.0% |
| ! | ACCTAAAGAAAAGATTAAAG+TGG | - | chr1_1:63081950-63081969 | None:intergenic | 25.0% |
| CAGAAACTGAAGAGAATAAT+CGG | - | chr1_1:63074429-63074448 | None:intergenic | 30.0% | |
| !!! | CTTCATTTCCTCTTTTTTCT+AGG | + | chr1_1:63074453-63074472 | Msa0035060:intron | 30.0% |
| AAAGAAACCCTAGAAAAAAG+AGG | - | chr1_1:63074464-63074483 | None:intergenic | 30.0% | |
| ! | TTTTATTACCTTAAGTTCCG+AGG | + | chr1_1:63074591-63074610 | Msa0035060:intron | 30.0% |
| ATTCACATCTTGCTTTCAAA+CGG | + | chr1_1:63074619-63074638 | Msa0035060:intron | 30.0% | |
| ! | TTTGATTTAAGCTTGATCTG+TGG | + | chr1_1:63074687-63074706 | Msa0035060:intron | 30.0% |
| TTGATTTAAGCTTGATCTGT+GGG | + | chr1_1:63074688-63074707 | Msa0035060:intron | 30.0% | |
| TACATTATCAGGTCAGTTAA+TGG | + | chr1_1:63074755-63074774 | Msa0035060:intron | 30.0% | |
| TTATGAACTGTGGTTTAGTT+TGG | + | chr1_1:63074878-63074897 | Msa0035060:intron | 30.0% | |
| ACTTATGATAGTCTGGAAAT+TGG | + | chr1_1:63074924-63074943 | Msa0035060:intron | 30.0% | |
| ACAACTATTATGAATGCTCA+GGG | - | chr1_1:63075045-63075064 | None:intergenic | 30.0% | |
| TACAACTATTATGAATGCTC+AGG | - | chr1_1:63075046-63075065 | None:intergenic | 30.0% | |
| GAAAATTTCCATAGGAGTTA+TGG | + | chr1_1:63075275-63075294 | Msa0035060:CDS | 30.0% | |
| ! | TTATCAGTCTCAAAGACTTT+TGG | - | chr1_1:63075747-63075766 | None:intergenic | 30.0% |
| !! | CTTTGAGACTGATAAAACAA+AGG | + | chr1_1:63075752-63075771 | Msa0035060:CDS | 30.0% |
| ATGAAGCTATGCCAAATATT+GGG | + | chr1_1:63075822-63075841 | Msa0035060:CDS | 30.0% | |
| !! | TCTTTTGAAGAAAAAGGGAT+TGG | + | chr1_1:63076134-63076153 | Msa0035060:CDS | 30.0% |
| ! | GTCTTTAAAGAAAAAGAGTC+AGG | + | chr1_1:63076193-63076212 | Msa0035060:CDS | 30.0% |
| AGGAAAAGAGTTCCAAAATA+GGG | + | chr1_1:63076213-63076232 | Msa0035060:CDS | 30.0% | |
| GTCTTGATGAAGTTTATTTG+TGG | - | chr1_1:63076270-63076289 | None:intergenic | 30.0% | |
| TTTATTCCCAAGTGAAAATG+AGG | - | chr1_1:63076327-63076346 | None:intergenic | 30.0% | |
| AATAAAATGGGAGGATTTAG+TGG | + | chr1_1:63076341-63076360 | Msa0035060:CDS | 30.0% | |
| !! | TATTGTTTGCTGTTTGTGTT+GGG | - | chr1_1:63076433-63076452 | None:intergenic | 30.0% |
| GGTGTCTTAAATTGAAATGT+AGG | - | chr1_1:63076560-63076579 | None:intergenic | 30.0% | |
| ! | TATTGACATCATTTGCCTTT+TGG | - | chr1_1:63076619-63076638 | None:intergenic | 30.0% |
| ! | CATAGAAAATCTTGGTCTTT+CGG | - | chr1_1:63076654-63076673 | None:intergenic | 30.0% |
| ! | AAAGACCAAGATTTTCTATG+AGG | + | chr1_1:63076654-63076673 | Msa0035060:CDS | 30.0% |
| !! | AAAAGTGCTTAAATTAGGCA+TGG | - | chr1_1:63076681-63076700 | None:intergenic | 30.0% |
| ! | GCCTAATTTAAGCACTTTTA+TGG | + | chr1_1:63076682-63076701 | Msa0035060:CDS | 30.0% |
| !! | GCCATAAAAGTGCTTAAATT+AGG | - | chr1_1:63076686-63076705 | None:intergenic | 30.0% |
| ! | TTTAAGCACTTTTATGGCTT+CGG | + | chr1_1:63076688-63076707 | Msa0035060:CDS | 30.0% |
| ATCATCAGATTCATCATATG+AGG | + | chr1_1:63076926-63076945 | Msa0035060:CDS | 30.0% | |
| ATATATGTTCATACTTCCTG+AGG | - | chr1_1:63077128-63077147 | None:intergenic | 30.0% | |
| ! | TATTTTGTTACATGCCACAT+AGG | + | chr1_1:63077379-63077398 | Msa0035060:intron | 30.0% |
| AAATCTGATAAAGACCTATG+TGG | - | chr1_1:63077396-63077415 | None:intergenic | 30.0% | |
| ! | TAACCTGTGATTTGAGATTA+AGG | + | chr1_1:63077436-63077455 | Msa0035060:intron | 30.0% |
| ACTATTTACTGGTGCTTATA+AGG | + | chr1_1:63077473-63077492 | Msa0035060:intron | 30.0% | |
| AATGCATTAAAAGCTAACAG+AGG | - | chr1_1:63077750-63077769 | None:intergenic | 30.0% | |
| TTACACTTAAACCTGTCAAA+AGG | + | chr1_1:63077917-63077936 | Msa0035060:CDS | 30.0% | |
| !! | TATGATTTTTGCCGATTGTT+AGG | + | chr1_1:63078248-63078267 | Msa0035060:intron | 30.0% |
| !! | ATGATTTTTGCCGATTGTTA+GGG | + | chr1_1:63078249-63078268 | Msa0035060:intron | 30.0% |
| AACAGACTTCAAAATTTCTG+AGG | - | chr1_1:63078344-63078363 | None:intergenic | 30.0% | |
| AACTATTCAGAGTCATTATG+AGG | - | chr1_1:63078757-63078776 | None:intergenic | 30.0% | |
| CTGAATAGTTCTCCTTATAA+AGG | + | chr1_1:63078767-63078786 | Msa0035060:intron | 30.0% | |
| CAAATTAAGTGAACCAAAAC+AGG | - | chr1_1:63078937-63078956 | None:intergenic | 30.0% | |
| CATGACGAAAATATTGGATA+TGG | - | chr1_1:63079342-63079361 | None:intergenic | 30.0% | |
| GGAAAACATGACGAAAATAT+TGG | - | chr1_1:63079348-63079367 | None:intergenic | 30.0% | |
| ! | TGGTCTACATTTTTGTTAAG+AGG | - | chr1_1:63079465-63079484 | None:intergenic | 30.0% |
| ! | AAGAATCAACTGAGTTTTTG+AGG | + | chr1_1:63080050-63080069 | Msa0035060:intron | 30.0% |
| ! | AGAATCAACTGAGTTTTTGA+GGG | + | chr1_1:63080051-63080070 | Msa0035060:intron | 30.0% |
| ATAACCTAATACAGCTTAAC+GGG | - | chr1_1:63080104-63080123 | None:intergenic | 30.0% | |
| ATGTTTATGACTATCAGAGA+TGG | + | chr1_1:63080126-63080145 | Msa0035060:intron | 30.0% | |
| TTTACACATAAAAACGGGAA+GGG | - | chr1_1:63080246-63080265 | None:intergenic | 30.0% | |
| ATTTACACATAAAAACGGGA+AGG | - | chr1_1:63080247-63080266 | None:intergenic | 30.0% | |
| AATGAATGTAAACTGTGTCA+GGG | - | chr1_1:63080297-63080316 | None:intergenic | 30.0% | |
| AAATGAATGTAAACTGTGTC+AGG | - | chr1_1:63080298-63080317 | None:intergenic | 30.0% | |
| TTATTGAGTTAAAGCTGAAG+TGG | - | chr1_1:63080383-63080402 | None:intergenic | 30.0% | |
| ! | ACTTCAGCTTTAACTCAATA+AGG | + | chr1_1:63080382-63080401 | Msa0035060:intron | 30.0% |
| ! | CTTCAGCTTTAACTCAATAA+GGG | + | chr1_1:63080383-63080402 | Msa0035060:intron | 30.0% |
| ACAAGTTCAGTCTAAATAAC+TGG | - | chr1_1:63080885-63080904 | None:intergenic | 30.0% | |
| AAGGAATAGTAAAGAATCTC+AGG | - | chr1_1:63081043-63081062 | None:intergenic | 30.0% | |
| AAGTTCAGTAAATGATGCAA+AGG | - | chr1_1:63081133-63081152 | None:intergenic | 30.0% | |
| TTGTGTCAATTAAATTGGGA+CGG | - | chr1_1:63081199-63081218 | None:intergenic | 30.0% | |
| ! | TTGAAATGGGTCAGTTATTT+TGG | + | chr1_1:63081306-63081325 | Msa0035060:intron | 30.0% |
| !! | TGAAATGGGTCAGTTATTTT+GGG | + | chr1_1:63081307-63081326 | Msa0035060:intron | 30.0% |
| AGAAAATGTGTCAGTTATTC+CGG | + | chr1_1:63081336-63081355 | Msa0035060:intron | 30.0% | |
| AAAAAAAGGGGAACTGAAAT+GGG | - | chr1_1:63081382-63081401 | None:intergenic | 30.0% | |
| AAAAAAAAGGGGAACTGAAA+TGG | - | chr1_1:63081383-63081402 | None:intergenic | 30.0% | |
| TATAACGATGTGTTTGAAAG+AGG | + | chr1_1:63081529-63081548 | Msa0035060:CDS | 30.0% | |
| ATAACGATGTGTTTGAAAGA+GGG | + | chr1_1:63081530-63081549 | Msa0035060:CDS | 30.0% | |
| !! | TTTGAAAGAGGGTATCTAAA+TGG | + | chr1_1:63081541-63081560 | Msa0035060:CDS | 30.0% |
| ! | AGCAAAGTTTGTAACTTGTA+AGG | - | chr1_1:63081585-63081604 | None:intergenic | 30.0% |
| AAGTAGCTTCACTTAAAAAG+GGG | - | chr1_1:63081692-63081711 | None:intergenic | 30.0% | |
| GTAAGTAGCTTCACTTAAAA+AGG | - | chr1_1:63081694-63081713 | None:intergenic | 30.0% | |
| TTAAGTGAAGCTACTTACAA+AGG | + | chr1_1:63081696-63081715 | Msa0035060:three_prime_UTR | 30.0% | |
| !!! | AAGGCACTTTTGTATTGATT+TGG | + | chr1_1:63081715-63081734 | Msa0035060:three_prime_UTR | 30.0% |
| ACGAATAATAAATCCAGGAT+TGG | - | chr1_1:63081755-63081774 | None:intergenic | 30.0% | |
| AAACATCTCATTTGTTCGAA+GGG | + | chr1_1:63081796-63081815 | Msa0035060:three_prime_UTR | 30.0% | |
| ! | CCCACTTTAATCTTTTCTTT+AGG | + | chr1_1:63081946-63081965 | Msa0035060:three_prime_UTR | 30.0% |
| GTTGGAATTAATTGACAGTA+AGG | + | chr1_1:63082000-63082019 | Msa0035060:three_prime_UTR | 30.0% | |
| GAATGAGAAATTGAATGGAG+TGG | - | chr1_1:63074240-63074259 | None:intergenic | 35.0% | |
| !! | GAGAGATTTGAAATTTTCGG+TGG | - | chr1_1:63074262-63074281 | None:intergenic | 35.0% |
| !! | CAATTTGTTGAGCTGAGATT+AGG | + | chr1_1:63074390-63074409 | Msa0035060:intron | 35.0% |
| AATAACAACCTCGGAACTTA+AGG | - | chr1_1:63074602-63074621 | None:intergenic | 35.0% | |
| CAAGATGTGAATAACAACCT+CGG | - | chr1_1:63074611-63074630 | None:intergenic | 35.0% | |
| TCATAAAAGTCGCAAAATCG+AGG | - | chr1_1:63074864-63074883 | None:intergenic | 35.0% | |
| ! | TTTGCGACTTTTATGAACTG+TGG | + | chr1_1:63074868-63074887 | Msa0035060:intron | 35.0% |
| ! | CTATGGAAATTTTCCTTGAC+TGG | - | chr1_1:63075269-63075288 | None:intergenic | 35.0% |
| CAGTCAAGGAAAATTTCCAT+AGG | + | chr1_1:63075267-63075286 | Msa0035060:CDS | 35.0% | |
| GTTGATATTTCCCATCTTAG+AGG | - | chr1_1:63075376-63075395 | None:intergenic | 35.0% | |
| AAGATGGGAAATATCAACAC+AGG | + | chr1_1:63075378-63075397 | Msa0035060:CDS | 35.0% | |
| ! | TCCAATTTGCTTCTCTTTAG+CGG | - | chr1_1:63075436-63075455 | None:intergenic | 35.0% |
| ! | TCTGTACTGTTTTCTGTTCT+AGG | - | chr1_1:63075792-63075811 | None:intergenic | 35.0% |
| GATGAAGCTATGCCAAATAT+TGG | + | chr1_1:63075821-63075840 | Msa0035060:CDS | 35.0% | |
| TGAAGCTATGCCAAATATTG+GGG | + | chr1_1:63075823-63075842 | Msa0035060:CDS | 35.0% | |
| TCACAATTGTAAGAAGGACA+AGG | + | chr1_1:63075881-63075900 | Msa0035060:CDS | 35.0% | |
| AAGTACCATAATTTCCAGAG+AGG | + | chr1_1:63076082-63076101 | Msa0035060:CDS | 35.0% | |
| TTTGAAGAAAAAGGGATTGG+CGG | + | chr1_1:63076137-63076156 | Msa0035060:CDS | 35.0% | |
| !! | CATCATTTGGAAAAGCATCT+CGG | - | chr1_1:63076163-63076182 | None:intergenic | 35.0% |
| CAGGAAAAGAGTTCCAAAAT+AGG | + | chr1_1:63076212-63076231 | Msa0035060:CDS | 35.0% | |
| GGAAAAGAGTTCCAAAATAG+GGG | + | chr1_1:63076214-63076233 | Msa0035060:CDS | 35.0% | |
| GAAAAGAGTTCCAAAATAGG+GGG | + | chr1_1:63076215-63076234 | Msa0035060:CDS | 35.0% | |
| !!! | TGGTCTTTTTTCTGTGTCTT+GGG | - | chr1_1:63076395-63076414 | None:intergenic | 35.0% |
| !! | GTATTGTTTGCTGTTTGTGT+TGG | - | chr1_1:63076434-63076453 | None:intergenic | 35.0% |
| ! | CAGAAATAGTTCTACACTCT+TGG | - | chr1_1:63076496-63076515 | None:intergenic | 35.0% |
| TTGAAATTCATCTTGCGACT+TGG | - | chr1_1:63076534-63076553 | None:intergenic | 35.0% | |
| ATGGTCCTCATAGAAAATCT+TGG | - | chr1_1:63076662-63076681 | None:intergenic | 35.0% | |
| GAAAACAAGAGACGAAACAT+CGG | - | chr1_1:63077152-63077171 | None:intergenic | 35.0% | |
| ! | AAGAACATACAAGATTGGCT+TGG | - | chr1_1:63077188-63077207 | None:intergenic | 35.0% |
| ! | CTCAAATCATTCTGATGATG+CGG | + | chr1_1:63077295-63077314 | Msa0035060:intron | 35.0% |
| TTCTTTGTGCAATGCATGAT+TGG | + | chr1_1:63077332-63077351 | Msa0035060:intron | 35.0% | |
| TCTCAAATCACAGGTTATGA+AGG | - | chr1_1:63077433-63077452 | None:intergenic | 35.0% | |
| ACACCTTAATCTCAAATCAC+AGG | - | chr1_1:63077442-63077461 | None:intergenic | 35.0% | |
| ATCTTGCAAATTGAAACCCA+GGG | + | chr1_1:63077567-63077586 | Msa0035060:intron | 35.0% | |
| !!! | ACGAATGGATTTTTTTCCCT+GGG | - | chr1_1:63077586-63077605 | None:intergenic | 35.0% |
| !!! | TACGAATGGATTTTTTTCCC+TGG | - | chr1_1:63077587-63077606 | None:intergenic | 35.0% |
| GGGAAAAAAATCCATTCGTA+TGG | + | chr1_1:63077587-63077606 | Msa0035060:intron | 35.0% | |
| ! | CAGTGTCTTTTCATTCATCA+CGG | - | chr1_1:63077655-63077674 | None:intergenic | 35.0% |
| GAAAAGACACTGATACTTGT+TGG | + | chr1_1:63077663-63077682 | Msa0035060:intron | 35.0% | |
| AAAAGGCTGTGCAAACATAA+AGG | + | chr1_1:63077934-63077953 | Msa0035060:CDS | 35.0% | |
| GTACAAGTCTGTTTCAATCT+GGG | - | chr1_1:63078404-63078423 | None:intergenic | 35.0% | |
| CGGATAGAAACAAGATTTGA+AGG | + | chr1_1:63078547-63078566 | Msa0035060:CDS | 35.0% | |
| AAGATATCCTCTTAGACAGA+AGG | - | chr1_1:63078691-63078710 | None:intergenic | 35.0% | |
| GAATATATTAGGATGAAGGG+TGG | + | chr1_1:63078870-63078889 | Msa0035060:intron | 35.0% | |
| TACAAGTGCTTGTAAGTTGT+AGG | + | chr1_1:63079077-63079096 | Msa0035060:intron | 35.0% | |
| GCAAAGTGAGAAATCAAATG+CGG | - | chr1_1:63079256-63079275 | None:intergenic | 35.0% | |
| GCAGATCAGATAGAGATAAA+AGG | + | chr1_1:63079576-63079595 | Msa0035060:CDS | 35.0% | |
| !! | GTTAGCTCTGTATTGTATTG+TGG | + | chr1_1:63079868-63079887 | Msa0035060:intron | 35.0% |
| TAAGGATGTAAGCTCACTTT+AGG | + | chr1_1:63079902-63079921 | Msa0035060:intron | 35.0% | |
| CTATAAACAGAAGCTACCAA+TGG | - | chr1_1:63079942-63079961 | None:intergenic | 35.0% | |
| !! | GAATCAACTGAGTTTTTGAG+GGG | + | chr1_1:63080052-63080071 | Msa0035060:intron | 35.0% |
| TAACCTAATACAGCTTAACG+GGG | - | chr1_1:63080103-63080122 | None:intergenic | 35.0% | |
| AGATATAAGGTGAGACTTTG+AGG | + | chr1_1:63080168-63080187 | Msa0035060:intron | 35.0% | |
| GATATAAGGTGAGACTTTGA+GGG | + | chr1_1:63080169-63080188 | Msa0035060:intron | 35.0% | |
| GCTTTAACTCAATAAGGGAT+TGG | + | chr1_1:63080388-63080407 | Msa0035060:intron | 35.0% | |
| ! | CTCAATAAGGGATTGGTATT+TGG | + | chr1_1:63080395-63080414 | Msa0035060:intron | 35.0% |
| GATTTCTTGCATCTAATCTC+TGG | + | chr1_1:63080420-63080439 | Msa0035060:intron | 35.0% | |
| TTGCATCTAATCTCTGGTTA+AGG | + | chr1_1:63080426-63080445 | Msa0035060:intron | 35.0% | |
| TGCATCTAATCTCTGGTTAA+GGG | + | chr1_1:63080427-63080446 | Msa0035060:intron | 35.0% | |
| ! | ATCACAAGTTGAAGAATCAG+TGG | + | chr1_1:63080551-63080570 | Msa0035060:CDS | 35.0% |
| ! | TCTTTTGAGCATCATTGAGT+TGG | - | chr1_1:63080581-63080600 | None:intergenic | 35.0% |
| ! | AATGGTTAGTCATCAACCAA+TGG | + | chr1_1:63080721-63080740 | Msa0035060:intron | 35.0% |
| TAATCCTAGAATTGAGCCAT+TGG | - | chr1_1:63080740-63080759 | None:intergenic | 35.0% | |
| !! | AAAGAATCTCAGGTGTTGAT+GGG | - | chr1_1:63081033-63081052 | None:intergenic | 35.0% |
| !! | TAAAGAATCTCAGGTGTTGA+TGG | - | chr1_1:63081034-63081053 | None:intergenic | 35.0% |
| !! | AAAGGGTGTCTTACTTTGAA+AGG | - | chr1_1:63081062-63081081 | None:intergenic | 35.0% |
| GAAAATGTGTCAGTTATTCC+GGG | + | chr1_1:63081337-63081356 | Msa0035060:intron | 35.0% | |
| AAGTACGTGGAAAACTCTAA+TGG | - | chr1_1:63081654-63081673 | None:intergenic | 35.0% | |
| GAAACATCTCATTTGTTCGA+AGG | + | chr1_1:63081795-63081814 | Msa0035060:three_prime_UTR | 35.0% | |
| AAGCAAGACATACTAACAGT+GGG | - | chr1_1:63081906-63081925 | None:intergenic | 35.0% | |
| AAAGCAAGACATACTAACAG+TGG | - | chr1_1:63081907-63081926 | None:intergenic | 35.0% | |
| ACTGTTAGTATGTCTTGCTT+TGG | + | chr1_1:63081906-63081925 | Msa0035060:three_prime_UTR | 35.0% | |
| CGGTGGAATGAGAAATTGAA+TGG | - | chr1_1:63074245-63074264 | None:intergenic | 40.0% | |
| ACTTCACGAATATCAGAGCA+AGG | + | chr1_1:63074291-63074310 | Msa0035060:five_prime_UTR | 40.0% | |
| ACTCATCGCTCATGAATCAA+AGG | - | chr1_1:63074655-63074674 | None:intergenic | 40.0% | |
| TCTTGCTTAACTGAAATCGC+TGG | + | chr1_1:63074781-63074800 | Msa0035060:five_prime_UTR | 40.0% | |
| ! | AGGAGCATATGAATGACTGT+CGG | + | chr1_1:63075217-63075236 | Msa0035060:intron | 40.0% |
| TATGAATGACTGTCGGAGTA+TGG | + | chr1_1:63075224-63075243 | Msa0035060:CDS | 40.0% | |
| ATGAATGACTGTCGGAGTAT+GGG | + | chr1_1:63075225-63075244 | Msa0035060:CDS | 40.0% | |
| !! | ATTTTCCTTGACTGGCTAGA+CGG | - | chr1_1:63075261-63075280 | None:intergenic | 40.0% |
| TGTCGTGCCAAATACAGAAA+GGG | + | chr1_1:63075347-63075366 | Msa0035060:CDS | 40.0% | |
| GAGGTTACCCTTTCTGTATT+TGG | - | chr1_1:63075357-63075376 | None:intergenic | 40.0% | |
| ! | AGAAAGGGTAACCTCTAAGA+TGG | + | chr1_1:63075362-63075381 | Msa0035060:CDS | 40.0% |
| !! | GAAAGGGTAACCTCTAAGAT+GGG | + | chr1_1:63075363-63075382 | Msa0035060:CDS | 40.0% |
| TATCAACACAGGAGAAAGCA+AGG | + | chr1_1:63075389-63075408 | Msa0035060:CDS | 40.0% | |
| TCCGCTAAAGAGAAGCAAAT+TGG | + | chr1_1:63075432-63075451 | Msa0035060:CDS | 40.0% | |
| GCTAAAGAGAAGCAAATTGG+AGG | + | chr1_1:63075435-63075454 | Msa0035060:CDS | 40.0% | |
| ! | TGATGATTTGCCTCTGTAGT+AGG | - | chr1_1:63075498-63075517 | None:intergenic | 40.0% |
| !! | CAGTAAACTAGCGGTTTTGT+TGG | - | chr1_1:63075523-63075542 | None:intergenic | 40.0% |
| ! | CAACAAAACCGCTAGTTTAC+TGG | + | chr1_1:63075521-63075540 | Msa0035060:CDS | 40.0% |
| AGAAGAGACCAGTAAACTAG+CGG | - | chr1_1:63075532-63075551 | None:intergenic | 40.0% | |
| ! | CTAGTTTACTGGTCTCTTCT+GGG | + | chr1_1:63075532-63075551 | Msa0035060:CDS | 40.0% |
| ! | TAGTTTACTGGTCTCTTCTG+GGG | + | chr1_1:63075533-63075552 | Msa0035060:CDS | 40.0% |
| !! | TAGCAGAAGCTCTAGAAAGA+AGG | + | chr1_1:63075665-63075684 | Msa0035060:CDS | 40.0% |
| !! | AGCAGAAGCTCTAGAAAGAA+GGG | + | chr1_1:63075666-63075685 | Msa0035060:CDS | 40.0% |
| ! | CTCTAGAAAGAAGGGAAAGA+AGG | + | chr1_1:63075674-63075693 | Msa0035060:CDS | 40.0% |
| AGAAAGAAGGGAAAGAAGGA+TGG | + | chr1_1:63075678-63075697 | Msa0035060:CDS | 40.0% | |
| GAAAGAAGGGAAAGAAGGAT+GGG | + | chr1_1:63075679-63075698 | Msa0035060:CDS | 40.0% | |
| !! | CTCAAAGACTTTTGGTGTAG+TGG | - | chr1_1:63075739-63075758 | None:intergenic | 40.0% |
| AAGAAGTGGTCCCCAATATT+TGG | - | chr1_1:63075836-63075855 | None:intergenic | 40.0% | |
| AGGCTCTCACAATTGTAAGA+AGG | + | chr1_1:63075875-63075894 | Msa0035060:CDS | 40.0% | |
| !! | TTTCTCTTCTGGTTCAAGTG+TGG | - | chr1_1:63075924-63075943 | None:intergenic | 40.0% |
| ! | CGAGATGCTTTTCCAAATGA+TGG | + | chr1_1:63076161-63076180 | Msa0035060:CDS | 40.0% |
| GACACTGAAGAACCATCATT+TGG | - | chr1_1:63076176-63076195 | None:intergenic | 40.0% | |
| TCACTTGGGAATAAAATGGG+AGG | + | chr1_1:63076332-63076351 | Msa0035060:CDS | 40.0% | |
| !!! | GGTCTTTTTTCTGTGTCTTG+GGG | - | chr1_1:63076394-63076413 | None:intergenic | 40.0% |
| !!! | GTGGTCTTTTTTCTGTGTCT+TGG | - | chr1_1:63076396-63076415 | None:intergenic | 40.0% |
| !! | TTTGGTGTGTCTTTGGTGTT+GGG | - | chr1_1:63076601-63076620 | None:intergenic | 40.0% |
| !! | TTTTGGTGTGTCTTTGGTGT+TGG | - | chr1_1:63076602-63076621 | None:intergenic | 40.0% |
| AACACCAAAGACACACCAAA+AGG | + | chr1_1:63076601-63076620 | Msa0035060:CDS | 40.0% | |
| !! | TTTGCCTTTTGGTGTGTCTT+TGG | - | chr1_1:63076608-63076627 | None:intergenic | 40.0% |
| ! | TGTTCCCTTGTTGTGAAGTT+TGG | - | chr1_1:63076716-63076735 | None:intergenic | 40.0% |
| CAGATTCATCATATGAGGAG+AGG | + | chr1_1:63076931-63076950 | Msa0035060:CDS | 40.0% | |
| ! | AAACCAAACACATTAGCCTC+AGG | + | chr1_1:63077109-63077128 | Msa0035060:intron | 40.0% |
| ! | ATCATTCTGATGATGCGGAT+AGG | + | chr1_1:63077300-63077319 | Msa0035060:intron | 40.0% |
| ! | TCATTCTGATGATGCGGATA+GGG | + | chr1_1:63077301-63077320 | Msa0035060:intron | 40.0% |
| GCTCTGTCATCACTATTTAC+TGG | + | chr1_1:63077462-63077481 | Msa0035060:intron | 40.0% | |
| CATCTTGCAAATTGAAACCC+AGG | + | chr1_1:63077566-63077585 | Msa0035060:intron | 40.0% | |
| CAACTAACACTCCATACGAA+TGG | - | chr1_1:63077601-63077620 | None:intergenic | 40.0% | |
| ACCATCTTCTGTTCATGTGT+AGG | + | chr1_1:63077859-63077878 | Msa0035060:intron | 40.0% | |
| ACCTACACATGAACAGAAGA+TGG | - | chr1_1:63077863-63077882 | None:intergenic | 40.0% | |
| TTCTGTTCATGTGTAGGTTC+TGG | + | chr1_1:63077865-63077884 | Msa0035060:intron | 40.0% | |
| GATAGAAGAAAGCGATTCGA+TGG | + | chr1_1:63078098-63078117 | Msa0035060:CDS | 40.0% | |
| ! | AGACTCAAGATGGATTTGTC+AGG | + | chr1_1:63078136-63078155 | Msa0035060:CDS | 40.0% |
| AGTTCAACAGCCCTAACAAT+CGG | - | chr1_1:63078262-63078281 | None:intergenic | 40.0% | |
| !! | TGAACTGTTCGCTTTGGAAT+TGG | + | chr1_1:63078276-63078295 | Msa0035060:CDS | 40.0% |
| CGTACAAGTCTGTTTCAATC+TGG | - | chr1_1:63078405-63078424 | None:intergenic | 40.0% | |
| TCCAAAACCTTCTGTCTAAG+AGG | + | chr1_1:63078681-63078700 | Msa0035060:intron | 40.0% | |
| ! | TCCTCTTAGACAGAAGGTTT+TGG | - | chr1_1:63078685-63078704 | None:intergenic | 40.0% |
| ! | TGTTCTTTTGGCACCTGTTT+TGG | + | chr1_1:63078921-63078940 | Msa0035060:intron | 40.0% |
| ! | AATATCAGGTCCGAAAGCAT+AGG | + | chr1_1:63079187-63079206 | Msa0035060:intron | 40.0% |
| ! | ATATCAGGTCCGAAAGCATA+GGG | + | chr1_1:63079188-63079207 | Msa0035060:intron | 40.0% |
| GAGATTCTTCCCTATGCTTT+CGG | - | chr1_1:63079200-63079219 | None:intergenic | 40.0% | |
| !! | TTAATCTCAGCTGTTTCTGC+TGG | - | chr1_1:63079485-63079504 | None:intergenic | 40.0% |
| CTACGATAGATTCAAGGAAG+AGG | + | chr1_1:63079506-63079525 | Msa0035060:CDS | 40.0% | |
| AGAGGTTAATCTACACCTAC+AGG | + | chr1_1:63079524-63079543 | Msa0035060:CDS | 40.0% | |
| GTATTGTATTGTGGCTCAAG+TGG | + | chr1_1:63079877-63079896 | Msa0035060:intron | 40.0% | |
| ATTGTGGCTCAAGTGGTTTA+AGG | + | chr1_1:63079884-63079903 | Msa0035060:intron | 40.0% | |
| ! | GTGCTACTCCTACAATACAT+AGG | - | chr1_1:63080518-63080537 | None:intergenic | 40.0% |
| GAAAATTACATCCACACAGC+AGG | + | chr1_1:63080599-63080618 | Msa0035060:CDS | 40.0% | |
| TAACTATGTACACCAGCACT+GGG | + | chr1_1:63080642-63080661 | Msa0035060:intron | 40.0% | |
| TCAACCAATGGCTCAATTCT+AGG | + | chr1_1:63080733-63080752 | Msa0035060:intron | 40.0% | |
| !! | AAGAATCTCAGGTGTTGATG+GGG | - | chr1_1:63081032-63081051 | None:intergenic | 40.0% |
| TGCAAAGGAAACACATGAAG+AGG | - | chr1_1:63081118-63081137 | None:intergenic | 40.0% | |
| TGTCAATTAAATTGGGACGG+AGG | - | chr1_1:63081196-63081215 | None:intergenic | 40.0% | |
| ! | TTATCCTCATTGACTGCAGA+TGG | + | chr1_1:63081475-63081494 | Msa0035060:intron | 40.0% |
| TTTCTCCATATTCTTGGCAC+TGG | + | chr1_1:63081626-63081645 | Msa0035060:three_prime_UTR | 40.0% | |
| GGGGGATAATATTAAGTACG+TGG | - | chr1_1:63081667-63081686 | None:intergenic | 40.0% | |
| TTCACTTAAAAAGGGGTTGG+GGG | - | chr1_1:63081685-63081704 | None:intergenic | 40.0% | |
| CTTCACTTAAAAAGGGGTTG+GGG | - | chr1_1:63081686-63081705 | None:intergenic | 40.0% | |
| GCTTCACTTAAAAAGGGGTT+GGG | - | chr1_1:63081687-63081706 | None:intergenic | 40.0% | |
| AGCTTCACTTAAAAAGGGGT+TGG | - | chr1_1:63081688-63081707 | None:intergenic | 40.0% | |
| ATAAATCCAGGATTGGAGAC+TGG | - | chr1_1:63081748-63081767 | None:intergenic | 40.0% | |
| GTCATGTTAAGAACGTCCTA+TGG | + | chr1_1:63081845-63081864 | Msa0035060:three_prime_UTR | 40.0% | |
| GGTGATTAGTAGTGAAGCAA+TGG | + | chr1_1:63082021-63082040 | Msa0035060:three_prime_UTR | 40.0% | |
| CACATCTTGCTTTCAAACGG+TGG | + | chr1_1:63074622-63074641 | Msa0035060:intron | 45.0% | |
| CAACAATGGATACTGAAGCG+CGG | + | chr1_1:63074812-63074831 | Msa0035060:exon | 45.0% | |
| CGATTCTGCCATAACTCCTA+TGG | - | chr1_1:63075286-63075305 | None:intergenic | 45.0% | |
| TCAAGAAGCGGACCTAAGAA+AGG | + | chr1_1:63075315-63075334 | Msa0035060:CDS | 45.0% | |
| CAAGAAGCGGACCTAAGAAA+GGG | + | chr1_1:63075316-63075335 | Msa0035060:CDS | 45.0% | |
| AAGAAGCGGACCTAAGAAAG+GGG | + | chr1_1:63075317-63075336 | Msa0035060:CDS | 45.0% | |
| CTTTCTGTATTTGGCACGAC+AGG | - | chr1_1:63075348-63075367 | None:intergenic | 45.0% | |
| CTGTCGTGCCAAATACAGAA+AGG | + | chr1_1:63075346-63075365 | Msa0035060:CDS | 45.0% | |
| GCAAATTGGAGGTCCAAAAG+CGG | + | chr1_1:63075446-63075465 | Msa0035060:CDS | 45.0% | |
| GTCTAAATCGCCTACTACAG+AGG | + | chr1_1:63075485-63075504 | Msa0035060:CDS | 45.0% | |
| ! | GCTAGTTTACTGGTCTCTTC+TGG | + | chr1_1:63075531-63075550 | Msa0035060:CDS | 45.0% |
| ! | AGTTTACTGGTCTCTTCTGG+GGG | + | chr1_1:63075534-63075553 | Msa0035060:CDS | 45.0% |
| AAGGATGAGCCTCATGGAAA+AGG | + | chr1_1:63075561-63075580 | Msa0035060:CDS | 45.0% | |
| AGGATGAGCCTCATGGAAAA+GGG | + | chr1_1:63075562-63075581 | Msa0035060:CDS | 45.0% | |
| AGCCTGAATCCTGAGTCTTA+GGG | - | chr1_1:63075860-63075879 | None:intergenic | 45.0% | |
| GTCCTGACCATACTCGTAAA+AGG | + | chr1_1:63075997-63076016 | Msa0035060:CDS | 45.0% | |
| !!! | TGACTGGCCTTTTACGAGTA+TGG | - | chr1_1:63076007-63076026 | None:intergenic | 45.0% |
| ! | ATCCTTTCCCTGTTGCTTCT+GGG | - | chr1_1:63076060-63076079 | None:intergenic | 45.0% |
| ! | TATCCTTTCCCTGTTGCTTC+TGG | - | chr1_1:63076061-63076080 | None:intergenic | 45.0% |
| ! | CTCTGCCTCTCTGGAAATTA+TGG | - | chr1_1:63076090-63076109 | None:intergenic | 45.0% |
| ! | GAGCTTATGTCCCCCTATTT+TGG | - | chr1_1:63076228-63076247 | None:intergenic | 45.0% |
| AGATCAGCGTGTAGAACATG+AGG | + | chr1_1:63076454-63076473 | Msa0035060:CDS | 45.0% | |
| GGAGCCAAACTTCACAACAA+GGG | + | chr1_1:63076709-63076728 | Msa0035060:CDS | 45.0% | |
| AAAGAGACAGAAGAGCAGGA+TGG | + | chr1_1:63076903-63076922 | Msa0035060:CDS | 45.0% | |
| TATGAGGAGAGGAACATCCA+AGG | + | chr1_1:63076942-63076961 | Msa0035060:CDS | 45.0% | |
| CTTCCTGAGGCTAATGTGTT+TGG | - | chr1_1:63077115-63077134 | None:intergenic | 45.0% | |
| !! | CATACAAGATTGGCTTGGCA+TGG | - | chr1_1:63077183-63077202 | None:intergenic | 45.0% |
| AGGTGTTAAAGTTACCTGCC+AGG | + | chr1_1:63077493-63077512 | Msa0035060:intron | 45.0% | |
| GAACCTAGAAACTGTGAACC+TGG | - | chr1_1:63077514-63077533 | None:intergenic | 45.0% | |
| TTACAACCGCATCTACTGGA+GGG | - | chr1_1:63077631-63077650 | None:intergenic | 45.0% | |
| ! | GAGAAAAGCATACTGCTGAG+AGG | + | chr1_1:63077887-63077906 | Msa0035060:CDS | 45.0% |
| ! | TGTTTGCACAGCCTTTTGAC+AGG | - | chr1_1:63077931-63077950 | None:intergenic | 45.0% |
| GCAGCTTCAGTGTCTTCAAA+AGG | + | chr1_1:63077979-63077998 | Msa0035060:CDS | 45.0% | |
| GCTTCTGAACAGACTCAAGA+TGG | + | chr1_1:63078126-63078145 | Msa0035060:CDS | 45.0% | |
| AGACATACATTTCCAGCTGC+AGG | + | chr1_1:63078369-63078388 | Msa0035060:CDS | 45.0% | |
| ! | AAGCACTGTAGAAGATCTCG+AGG | + | chr1_1:63079554-63079573 | Msa0035060:CDS | 45.0% |
| GGATGTAAGCTCACTTTAGG+TGG | + | chr1_1:63079905-63079924 | Msa0035060:intron | 45.0% | |
| !! | AGAAGCTACCAATGGACTGT+GGG | - | chr1_1:63079934-63079953 | None:intergenic | 45.0% |
| AATACAGCTTAACGGGGACT+CGG | - | chr1_1:63080097-63080116 | None:intergenic | 45.0% | |
| AGTCCCCGTTAAGCTGTATT+AGG | + | chr1_1:63080097-63080116 | Msa0035060:intron | 45.0% | |
| ACAAATACTTGCCTGCTGTG+TGG | - | chr1_1:63080613-63080632 | None:intergenic | 45.0% | |
| GTAACTATGTACACCAGCAC+TGG | + | chr1_1:63080641-63080660 | Msa0035060:intron | 45.0% | |
| AGACATTGAAAACCCAGTGC+TGG | - | chr1_1:63080657-63080676 | None:intergenic | 45.0% | |
| ATTGACTGCAAGACCACTGA+AGG | + | chr1_1:63080820-63080839 | Msa0035060:intron | 45.0% | |
| AAATTGGGACGGAGGTAGTA+AGG | - | chr1_1:63081188-63081207 | None:intergenic | 45.0% | |
| ATGTGTCAGTTATTCCGGGA+CGG | + | chr1_1:63081341-63081360 | Msa0035060:intron | 45.0% | |
| TGGTACCAGTGCCAAGAATA+TGG | - | chr1_1:63081634-63081653 | None:intergenic | 45.0% | |
| !! | ATAAAAAAAAAAAAAAAAAG+GGG | - | chr1_1:63081394-63081413 | None:intergenic | 5.0% |
| ! | CGCTGGCTGTAAACCAACAA+TGG | + | chr1_1:63074798-63074817 | Msa0035060:exon | 50.0% |
| CGCGCTTCAGTATCCATTGT+TGG | - | chr1_1:63074814-63074833 | None:intergenic | 50.0% | |
| !! | GTGGTTTAGTTTGGTCGCTG+TGG | + | chr1_1:63074887-63074906 | Msa0035060:intron | 50.0% |
| TTCATCCGTCTAGCCAGTCA+AGG | + | chr1_1:63075253-63075272 | Msa0035060:CDS | 50.0% | |
| TCGAAAGCCAGCTCAAGAAG+CGG | + | chr1_1:63075303-63075322 | Msa0035060:CDS | 50.0% | |
| ACAGGTCCATCCCCTTTCTT+AGG | - | chr1_1:63075330-63075349 | None:intergenic | 50.0% | |
| ACAGGAGAAAGCAAGGCTGT+AGG | + | chr1_1:63075396-63075415 | Msa0035060:CDS | 50.0% | |
| GAGAAAGCAAGGCTGTAGGA+GGG | + | chr1_1:63075400-63075419 | Msa0035060:CDS | 50.0% | |
| AATTGGAGGTCCAAAAGCGG+TGG | + | chr1_1:63075449-63075468 | Msa0035060:CDS | 50.0% | |
| ! | GTTTACTGGTCTCTTCTGGG+GGG | + | chr1_1:63075535-63075554 | Msa0035060:CDS | 50.0% |
| ! | ATGGAAAAGGGTGTGGAGCT+GGG | + | chr1_1:63075574-63075593 | Msa0035060:CDS | 50.0% |
| !! | AGGATGGGAGTGCTGAAGAA+AGG | + | chr1_1:63075694-63075713 | Msa0035060:CDS | 50.0% |
| !! | GGATGGGAGTGCTGAAGAAA+GGG | + | chr1_1:63075695-63075714 | Msa0035060:CDS | 50.0% |
| !! | GAGTGCTGAAGAAAGGGTAG+AGG | + | chr1_1:63075701-63075720 | Msa0035060:CDS | 50.0% |
| CTGAGTCTTAGGGGAAGAAG+TGG | - | chr1_1:63075850-63075869 | None:intergenic | 50.0% | |
| CACTTCTTCCCCTAAGACTC+AGG | + | chr1_1:63075848-63075867 | Msa0035060:CDS | 50.0% | |
| TCCCCTAAGACTCAGGATTC+AGG | + | chr1_1:63075855-63075874 | Msa0035060:CDS | 50.0% | |
| GCCTGAATCCTGAGTCTTAG+GGG | - | chr1_1:63075859-63075878 | None:intergenic | 50.0% | |
| GAGCCTGAATCCTGAGTCTT+AGG | - | chr1_1:63075861-63075880 | None:intergenic | 50.0% | |
| TGGTTCAAGTGTGGCTTGAG+CGG | - | chr1_1:63075915-63075934 | None:intergenic | 50.0% | |
| ! | GGCCTTTTACGAGTATGGTC+AGG | - | chr1_1:63076002-63076021 | None:intergenic | 50.0% |
| AAAGGCCAGTCACTCGTTCT+AGG | + | chr1_1:63076015-63076034 | Msa0035060:CDS | 50.0% | |
| CTGGGAAGACGCTTTCTTTC+TGG | - | chr1_1:63076042-63076061 | None:intergenic | 50.0% | |
| TTCCCAGAAGCAACAGGGAA+AGG | + | chr1_1:63076055-63076074 | Msa0035060:CDS | 50.0% | |
| TTGATGCTTCTCTGCCTCTC+TGG | - | chr1_1:63076099-63076118 | None:intergenic | 50.0% | |
| !! | CAGTGGTGGATCAGTCTTTG+AGG | - | chr1_1:63076294-63076313 | None:intergenic | 50.0% |
| ACTGATCCACCACTGTATGC+AGG | + | chr1_1:63076299-63076318 | Msa0035060:CDS | 50.0% | |
| CTGATCCACCACTGTATGCA+GGG | + | chr1_1:63076300-63076319 | Msa0035060:CDS | 50.0% | |
| TGATCCACCACTGTATGCAG+GGG | + | chr1_1:63076301-63076320 | Msa0035060:CDS | 50.0% | |
| ! | CAGGGGCCTCATTTTCACTT+GGG | + | chr1_1:63076318-63076337 | Msa0035060:CDS | 50.0% |
| !! | TGTGTCTTTGGTGTTGGGCT+AGG | - | chr1_1:63076596-63076615 | None:intergenic | 50.0% |
| ! | CTTGGTCTTTCGGTTGATGC+TGG | - | chr1_1:63076644-63076663 | None:intergenic | 50.0% |
| CGGAGCCAAACTTCACAACA+AGG | + | chr1_1:63076708-63076727 | Msa0035060:CDS | 50.0% | |
| GGAGAAAGAGACAGAAGAGC+AGG | + | chr1_1:63076899-63076918 | Msa0035060:CDS | 50.0% | |
| AACATCCAAGGACGTCGTCA+AGG | + | chr1_1:63076954-63076973 | Msa0035060:CDS | 50.0% | |
| ! | TCTGATGATGCGGATAGGGA+TGG | + | chr1_1:63077305-63077324 | Msa0035060:intron | 50.0% |
| ATGATGCGGATAGGGATGGT+TGG | + | chr1_1:63077309-63077328 | Msa0035060:intron | 50.0% | |
| CTAGAAACTGTGAACCTGGC+AGG | - | chr1_1:63077510-63077529 | None:intergenic | 50.0% | |
| CTGCCAGGTTCACAGTTTCT+AGG | + | chr1_1:63077508-63077527 | Msa0035060:intron | 50.0% | |
| CTTACAACCGCATCTACTGG+AGG | - | chr1_1:63077632-63077651 | None:intergenic | 50.0% | |
| GGCTGTTGAACTGTTCGCTT+TGG | + | chr1_1:63078270-63078289 | Msa0035060:CDS | 50.0% | |
| !! | CAGAAGCTACCAATGGACTG+TGG | - | chr1_1:63079935-63079954 | None:intergenic | 50.0% |
| ACCTGTAGCACGAGATGAGA+CGG | - | chr1_1:63079971-63079990 | None:intergenic | 50.0% | |
| TCATCTCGTGCTACAGGTTG+TGG | + | chr1_1:63079973-63079992 | Msa0035060:intron | 50.0% | |
| CATCTCGTGCTACAGGTTGT+GGG | + | chr1_1:63079974-63079993 | Msa0035060:intron | 50.0% | |
| ATACAGCTTAACGGGGACTC+GGG | - | chr1_1:63080096-63080115 | None:intergenic | 50.0% | |
| CTGGCTTCTGTCACTGAAGT+CGG | - | chr1_1:63080846-63080865 | None:intergenic | 50.0% | |
| GGTAGTAAGGAACAACTGGC+TGG | - | chr1_1:63081175-63081194 | None:intergenic | 50.0% | |
| CGGAGGTAGTAAGGAACAAC+TGG | - | chr1_1:63081179-63081198 | None:intergenic | 50.0% | |
| CTTGCCATCTGCAGTCAATG+AGG | - | chr1_1:63081482-63081501 | None:intergenic | 50.0% | |
| ! | CATTGACTGCAGATGGCAAG+AGG | + | chr1_1:63081482-63081501 | Msa0035060:intron | 50.0% |
| CAGGATTGGAGACTGGAACT+CGG | - | chr1_1:63081741-63081760 | None:intergenic | 50.0% | |
| CTTAGGTCCGCTTCTTGAGC+TGG | - | chr1_1:63075313-63075332 | None:intergenic | 55.0% | |
| AGCGGACCTAAGAAAGGGGA+TGG | + | chr1_1:63075321-63075340 | Msa0035060:CDS | 55.0% | |
| GGAGAAAGCAAGGCTGTAGG+AGG | + | chr1_1:63075399-63075418 | Msa0035060:CDS | 55.0% | |
| ! | CAAGAACCCTCCACCGCTTT+TGG | - | chr1_1:63075462-63075481 | None:intergenic | 55.0% |
| CAAAAGCGGTGGAGGGTTCT+TGG | + | chr1_1:63075460-63075479 | Msa0035060:CDS | 55.0% | |
| GGGAAGAAGGATGAGCCTCA+TGG | + | chr1_1:63075555-63075574 | Msa0035060:CDS | 55.0% | |
| GAGCCTCATGGAAAAGGGTG+TGG | + | chr1_1:63075567-63075586 | Msa0035060:CDS | 55.0% | |
| ! | GCTCCACACCCTTTTCCATG+AGG | - | chr1_1:63075573-63075592 | None:intergenic | 55.0% |
| ! | CATGGAAAAGGGTGTGGAGC+TGG | + | chr1_1:63075573-63075592 | Msa0035060:CDS | 55.0% |
| ! | TGGAAAAGGGTGTGGAGCTG+GGG | + | chr1_1:63075575-63075594 | Msa0035060:CDS | 55.0% |
| CTGGTCCTAGAACGAGTGAC+TGG | - | chr1_1:63076023-63076042 | None:intergenic | 55.0% | |
| AGCGTCTTCCCAGAAGCAAC+AGG | + | chr1_1:63076049-63076068 | Msa0035060:CDS | 55.0% | |
| GCGTCTTCCCAGAAGCAACA+GGG | + | chr1_1:63076050-63076069 | Msa0035060:CDS | 55.0% | |
| AATGAGGCCCCTGCATACAG+TGG | - | chr1_1:63076311-63076330 | None:intergenic | 55.0% | |
| ! | GCAGGGGCCTCATTTTCACT+TGG | + | chr1_1:63076317-63076336 | Msa0035060:CDS | 55.0% |
| GGGCTAGGAGAGCTCAAAGT+AGG | - | chr1_1:63076581-63076600 | None:intergenic | 55.0% | |
| CCAAACCTTGACGACGTCCT+TGG | - | chr1_1:63076962-63076981 | None:intergenic | 55.0% | |
| CCAAGGACGTCGTCAAGGTT+TGG | + | chr1_1:63076959-63076978 | Msa0035060:intron | 55.0% | |
| GTAGCTCCCTCCAGTAGATG+CGG | + | chr1_1:63077622-63077641 | Msa0035060:intron | 55.0% | |
| CGGCTTACAACCGCATCTAC+TGG | - | chr1_1:63077635-63077654 | None:intergenic | 55.0% | |
| GGGAATGAACATCCTGCAGC+TGG | - | chr1_1:63078384-63078403 | None:intergenic | 55.0% | |
| CAGTGCTTCTGCAGTCCTGT+AGG | - | chr1_1:63079542-63079561 | None:intergenic | 55.0% | |
| GGTGGATACCCACAGTCCAT+TGG | + | chr1_1:63079923-63079942 | Msa0035060:intron | 55.0% | |
| TACAGCTTAACGGGGACTCG+GGG | - | chr1_1:63080095-63080114 | None:intergenic | 55.0% | |
| TCACTGAAGTCGGCCTTCAG+TGG | - | chr1_1:63080836-63080855 | None:intergenic | 55.0% | |
| TGTCAGTTATTCCGGGACGG+AGG | + | chr1_1:63081344-63081363 | Msa0035060:intron | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | chr1_1:63081345-63081364 | Msa0035060:intron | 55.0% | |
| AACACATACTCCCTCCGTCC+CGG | - | chr1_1:63081358-63081377 | None:intergenic | 55.0% | |
| CGAGTTCCAGTCTCCAATCC+TGG | + | chr1_1:63081739-63081758 | Msa0035060:three_prime_UTR | 55.0% | |
| TGGAGGTCCAAAAGCGGTGG+AGG | + | chr1_1:63075452-63075471 | Msa0035060:CDS | 60.0% | |
| GGAGGTCCAAAAGCGGTGGA+GGG | + | chr1_1:63075453-63075472 | Msa0035060:CDS | 60.0% | |
| ! | GGTCTCTTCTGGGGGGAAGA+AGG | + | chr1_1:63075542-63075561 | Msa0035060:CDS | 60.0% |
| GCCGTCTCATCTCGTGCTAC+AGG | + | chr1_1:63079967-63079986 | Msa0035060:intron | 60.0% | |
| ! | GTGAGACTTTGAGGGCCAGC+CGG | + | chr1_1:63080177-63080196 | Msa0035060:intron | 60.0% |
| GAGGCCCCTGCATACAGTGG+TGG | - | chr1_1:63076308-63076327 | None:intergenic | 65.0% | |
| ! | ACTTTGAGGGCCAGCCGGAG+TGG | + | chr1_1:63080182-63080201 | Msa0035060:intron | 65.0% |
| ! | CTTTGAGGGCCAGCCGGAGT+GGG | + | chr1_1:63080183-63080202 | Msa0035060:intron | 65.0% |
| TTGCTCCCTCCAGCCCACTC+CGG | - | chr1_1:63080199-63080218 | None:intergenic | 65.0% | |
| ! | TGGGCTGGAGGGAGCAAGAG+TGG | + | chr1_1:63080202-63080221 | Msa0035060:intron | 65.0% |
| GGGCTGGAGGGAGCAAGAGT+GGG | + | chr1_1:63080203-63080222 | Msa0035060:intron | 65.0% | |
| !! | GCCAGCCGGAGTGGGCTGGA+GGG | + | chr1_1:63080191-63080210 | Msa0035060:intron | 75.0% |
| TCCCTCCAGCCCACTCCGGC+TGG | - | chr1_1:63080195-63080214 | None:intergenic | 75.0% | |
| ! | GAGGGCCAGCCGGAGTGGGC+TGG | + | chr1_1:63080187-63080206 | Msa0035060:intron | 80.0% |
| !!! | GGCCAGCCGGAGTGGGCTGG+AGG | + | chr1_1:63080190-63080209 | Msa0035060:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 63074179 | 63082044 | 63074179 | ID=Msa0035060;Name=Msa0035060 |
| chr1_1 | mRNA | 63074179 | 63082044 | 63074179 | ID=Msa0035060-mRNA-1;Parent=Msa0035060;Name=Msa0035060-mRNA-1;_AED=0.06;_eAED=0.06;_QI=185|0.8|0.81|1|0.9|0.81|11|468|817 |
| chr1_1 | exon | 63074179 | 63074312 | 63074179 | ID=Msa0035060-mRNA-1:exon:19992;Parent=Msa0035060-mRNA-1 |
| chr1_1 | exon | 63074766 | 63074849 | 63074766 | ID=Msa0035060-mRNA-1:exon:19993;Parent=Msa0035060-mRNA-1 |
| chr1_1 | exon | 63075219 | 63076748 | 63075219 | ID=Msa0035060-mRNA-1:exon:19994;Parent=Msa0035060-mRNA-1 |
| chr1_1 | exon | 63076852 | 63076975 | 63076852 | ID=Msa0035060-mRNA-1:exon:19995;Parent=Msa0035060-mRNA-1 |
| chr1_1 | exon | 63077881 | 63078000 | 63077881 | ID=Msa0035060-mRNA-1:exon:19996;Parent=Msa0035060-mRNA-1 |
| chr1_1 | exon | 63078097 | 63078157 | 63078097 | ID=Msa0035060-mRNA-1:exon:19997;Parent=Msa0035060-mRNA-1 |
| chr1_1 | exon | 63078270 | 63078419 | 63078270 | ID=Msa0035060-mRNA-1:exon:19998;Parent=Msa0035060-mRNA-1 |
| chr1_1 | exon | 63078510 | 63078568 | 63078510 | ID=Msa0035060-mRNA-1:exon:19999;Parent=Msa0035060-mRNA-1 |
| chr1_1 | exon | 63079418 | 63079615 | 63079418 | ID=Msa0035060-mRNA-1:exon:20000;Parent=Msa0035060-mRNA-1 |
| chr1_1 | exon | 63080529 | 63080624 | 63080529 | ID=Msa0035060-mRNA-1:exon:20001;Parent=Msa0035060-mRNA-1 |
| chr1_1 | exon | 63081494 | 63082044 | 63081494 | ID=Msa0035060-mRNA-1:exon:20002;Parent=Msa0035060-mRNA-1 |
| chr1_1 | five_prime_UTR | 63074179 | 63074312 | 63074179 | ID=Msa0035060-mRNA-1:five_prime_utr;Parent=Msa0035060-mRNA-1 |
| chr1_1 | five_prime_UTR | 63074766 | 63074816 | 63074766 | ID=Msa0035060-mRNA-1:five_prime_utr;Parent=Msa0035060-mRNA-1 |
| chr1_1 | CDS | 63074817 | 63074849 | 63074817 | ID=Msa0035060-mRNA-1:cds;Parent=Msa0035060-mRNA-1 |
| chr1_1 | CDS | 63075219 | 63076748 | 63075219 | ID=Msa0035060-mRNA-1:cds;Parent=Msa0035060-mRNA-1 |
| chr1_1 | CDS | 63076852 | 63076975 | 63076852 | ID=Msa0035060-mRNA-1:cds;Parent=Msa0035060-mRNA-1 |
| chr1_1 | CDS | 63077881 | 63078000 | 63077881 | ID=Msa0035060-mRNA-1:cds;Parent=Msa0035060-mRNA-1 |
| chr1_1 | CDS | 63078097 | 63078157 | 63078097 | ID=Msa0035060-mRNA-1:cds;Parent=Msa0035060-mRNA-1 |
| chr1_1 | CDS | 63078270 | 63078419 | 63078270 | ID=Msa0035060-mRNA-1:cds;Parent=Msa0035060-mRNA-1 |
| chr1_1 | CDS | 63078510 | 63078568 | 63078510 | ID=Msa0035060-mRNA-1:cds;Parent=Msa0035060-mRNA-1 |
| chr1_1 | CDS | 63079418 | 63079615 | 63079418 | ID=Msa0035060-mRNA-1:cds;Parent=Msa0035060-mRNA-1 |
| chr1_1 | CDS | 63080529 | 63080624 | 63080529 | ID=Msa0035060-mRNA-1:cds;Parent=Msa0035060-mRNA-1 |
| chr1_1 | CDS | 63081494 | 63081576 | 63081494 | ID=Msa0035060-mRNA-1:cds;Parent=Msa0035060-mRNA-1 |
| chr1_1 | three_prime_UTR | 63081577 | 63082044 | 63081577 | ID=Msa0035060-mRNA-1:three_prime_utr;Parent=Msa0035060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
