AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1294080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1294080 MtrunA17_Chr8g0370441 94.220 173 10 0 1 173 1 173 2.05e-119 334
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1294080 AT4G16444.1 56.322 174 70 3 1 168 1 174 4.36e-59 182

Find 46 sgRNAs with CRISPR-Local

Find 591 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAATTATTGATTGATTTAA+AGG 0.119968 8_3:-51769793 None:intergenic
AAATTATCTCTAAACTAAAT+TGG 0.195782 8_3:+51769692 Msa1294080:five_prime_UTR
TATATGATATGCATTTCTTC+AGG 0.277842 8_3:+51777610 Msa1294080:three_prime_UTR
TAAACTCACGTATGGCAAAT+AGG 0.304176 8_3:+51777467 Msa1294080:CDS
CAGCAAGAACAGGACGTTAC+TGG 0.351722 8_3:+51777546 Msa1294080:three_prime_UTR
AGTTCAAAATAACAATATTA+TGG 0.358657 8_3:+51773731 Msa1294080:CDS
CTTGGCTAGCAATATCTTCC+AGG 0.358950 8_3:+51777427 Msa1294080:CDS
TTGCAGGGAGATTATTATCT+TGG 0.368038 8_3:+51773697 Msa1294080:intron
CAACAACTTGTGCAACCATT+TGG 0.422346 8_3:+51773371 Msa1294080:CDS
TTGGATTGATAAATTCAAAC+AGG 0.425720 8_3:+51769913 Msa1294080:CDS
ATATGATATGCATTTCTTCA+GGG 0.446251 8_3:+51777611 Msa1294080:three_prime_UTR
ATCTTGAATTGAATCGATGA+TGG 0.446983 8_3:+51769814 Msa1294080:exon
GCTGCTTGTGCAAAGGTGGA+TGG 0.462042 8_3:-51772076 None:intergenic
AGATTATTATCTTGGAAGAC+TGG 0.477667 8_3:+51773705 Msa1294080:CDS
CTTCATCGAGAATGACTGAT+TGG 0.485002 8_3:+51777500 Msa1294080:three_prime_UTR
TTTATTTGTAAACTCACGTA+TGG 0.496534 8_3:+51777459 Msa1294080:CDS
CTGATTGGTAGCTGGTATCA+TGG 0.503277 8_3:+51777515 Msa1294080:three_prime_UTR
GGATTTAAAACAGCAAGAAC+AGG 0.503506 8_3:+51777536 Msa1294080:three_prime_UTR
TCATATAACACGCAGGAGGC+AGG 0.504758 8_3:-51777594 None:intergenic
CAGAAGACAGGCGGCTGCAA+AGG 0.508047 8_3:+51772105 Msa1294080:CDS
ACAAATGTTGATTATTCGCA+TGG 0.510430 8_3:-51769661 None:intergenic
ACAAATAAATTTGCTAACCC+TGG 0.520563 8_3:-51777445 None:intergenic
CGAATAATCAACATTTGTCA+TGG 0.521754 8_3:+51769666 Msa1294080:five_prime_UTR
CACGGGTTACTTACTGCGAA+AGG 0.522380 8_3:-51770691 None:intergenic
TGCAGGTTGGAATAATACCT+TGG 0.548398 8_3:+51777409 Msa1294080:intron
AGCAAGAACAGGACGTTACT+GGG 0.549246 8_3:+51777547 Msa1294080:three_prime_UTR
AGCAGCAAAACTCAGAAGAC+AGG 0.549517 8_3:+51772093 Msa1294080:CDS
GAGAATGACTGATTGGTAGC+TGG 0.550257 8_3:+51777507 Msa1294080:three_prime_UTR
TCTTGAATTGAATCGATGAT+GGG 0.557537 8_3:+51769815 Msa1294080:exon
ACGGGTTACTTACTGCGAAA+GGG 0.558069 8_3:-51770690 None:intergenic
TTGGCTAGCAATATCTTCCA+GGG 0.562616 8_3:+51777428 Msa1294080:CDS
TGTTGAGATATGCTAGCCAC+AGG 0.593702 8_3:-51773353 None:intergenic
AATAAATAAGACTAATCCAA+AGG 0.595973 8_3:-51777720 None:intergenic
CTGGAAGATATTGCTAGCCA+AGG 0.596628 8_3:-51777426 None:intergenic
ACAGGCGGCTGCAAAGGAGA+AGG 0.598906 8_3:+51772111 Msa1294080:CDS
AGGTCATAATTTACATGATG+AGG 0.603687 8_3:+51773164 Msa1294080:intron
GCTACAGGGTGGATCTGAGA+AGG 0.612886 8_3:+51770613 Msa1294080:intron
AGAACGATTAAGAATATGAG+AGG 0.613811 8_3:-51769869 None:intergenic
TTATTATCTTGGAAGACTGG+AGG 0.615774 8_3:+51773708 Msa1294080:CDS
TATAACACGCAGGAGGCAGG+AGG 0.623956 8_3:-51777591 None:intergenic
AGCAAAACTCAGAAGACAGG+CGG 0.649482 8_3:+51772096 Msa1294080:CDS
TGTATAGCAAGTATGTCATG+AGG 0.678226 8_3:+51777871 Msa1294080:three_prime_UTR
GAAAGCTCTATTCATCACAA+AGG 0.678514 8_3:+51773203 Msa1294080:CDS
ATGCATATCATATAACACGC+AGG 0.683131 8_3:-51777601 None:intergenic
ATAACACGCAGGAGGCAGGA+GGG 0.697793 8_3:-51777590 None:intergenic
CATATCATATAACACGCAGG+AGG 0.738250 8_3:-51777598 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATTATTGATTGATTTAA+AGG - chr8_3:51769796-51769815 None:intergenic 10.0%
!!! AAAATATTTTATTTGTTTAC+TGG + chr8_3:51776151-51776170 Msa1294080:intron 10.0%
!!! TTTATTAATTTGTTTGTTTT+TGG + chr8_3:51777737-51777756 Msa1294080:three_prime_UTR 10.0%
!! AAATTATCTCTAAACTAAAT+TGG + chr8_3:51769692-51769711 Msa1294080:five_prime_UTR 15.0%
!!! AATATTTAGACTGTTATTTT+GGG - chr8_3:51770172-51770191 None:intergenic 15.0%
!!! ACAATAATTATTTTATGAAG+CGG - chr8_3:51773130-51773149 None:intergenic 15.0%
!! AGTTCAAAATAACAATATTA+TGG + chr8_3:51773731-51773750 Msa1294080:CDS 15.0%
!! CAAATATTTCAAATACAATA+AGG - chr8_3:51773778-51773797 None:intergenic 15.0%
!! TACAATGAAAAAAAATAATC+TGG - chr8_3:51774064-51774083 None:intergenic 15.0%
!! TTCATTGTATTAGTATTATA+TGG + chr8_3:51774075-51774094 Msa1294080:intron 15.0%
!! AGACAGAAAAATAAATAAAA+AGG - chr8_3:51774192-51774211 None:intergenic 15.0%
!!! ATATCCAAATCATATTTTTT+TGG - chr8_3:51775962-51775981 None:intergenic 15.0%
!!! AAAAAAATATGATTTGGATA+TGG + chr8_3:51775961-51775980 Msa1294080:intron 15.0%
!!! AATAAAATATTTTCACAAAG+AGG - chr8_3:51776144-51776163 None:intergenic 15.0%
!!! AGTTAAAGATTATTTCTATT+TGG - chr8_3:51777098-51777117 None:intergenic 15.0%
!! AAATAGAAATAATCTTTAAC+TGG + chr8_3:51777097-51777116 Msa1294080:intron 15.0%
!! TTTATCATTACCAAATTATT+GGG - chr8_3:51777325-51777344 None:intergenic 15.0%
!!! TTTTATCATTACCAAATTAT+TGG - chr8_3:51777326-51777345 None:intergenic 15.0%
!!! TTTTTCACTTGATATTTTTT+TGG + chr8_3:51777647-51777666 Msa1294080:three_prime_UTR 15.0%
!!! TTTTCACTTGATATTTTTTT+GGG + chr8_3:51777648-51777667 Msa1294080:three_prime_UTR 15.0%
!!! ATACGTTTGTAAATTTTTTA+TGG + chr8_3:51777770-51777789 Msa1294080:three_prime_UTR 15.0%
!! AATATTGTATCACAAAACAA+CGG + chr8_3:51770078-51770097 Msa1294080:intron 20.0%
!!! CAATATTTAGACTGTTATTT+TGG - chr8_3:51770173-51770192 None:intergenic 20.0%
!!! TTGATAATATTCTGTATTAG+TGG + chr8_3:51770421-51770440 Msa1294080:intron 20.0%
!!! TCCTATATTTTTTACATTAG+CGG + chr8_3:51770454-51770473 Msa1294080:intron 20.0%
!!! AGAAATAAAACAACTTTTGA+AGG + chr8_3:51770658-51770677 Msa1294080:CDS 20.0%
!!! TTGATATTGATTATCTGAAA+GGG + chr8_3:51771121-51771140 Msa1294080:intron 20.0%
!! AAATCTTCATTCGATTATTT+GGG - chr8_3:51771293-51771312 None:intergenic 20.0%
!! AAAATCTTCATTCGATTATT+TGG - chr8_3:51771294-51771313 None:intergenic 20.0%
!!! TATTCTTTTTTGGAAATATG+AGG - chr8_3:51771317-51771336 None:intergenic 20.0%
!!! ATCGTTAAGATATTCTTTTT+TGG - chr8_3:51771327-51771346 None:intergenic 20.0%
!! AAAAAAGAATATCTTAACGA+TGG + chr8_3:51771326-51771345 Msa1294080:intron 20.0%
!! TAAAATTACAAGTGAAACTA+TGG + chr8_3:51771723-51771742 Msa1294080:intron 20.0%
!! AAAATTACAAGTGAAACTAT+GGG + chr8_3:51771724-51771743 Msa1294080:intron 20.0%
!!! ATTGATGATGAAATATTGAA+GGG + chr8_3:51771748-51771767 Msa1294080:intron 20.0%
!!! ATAATTTTTTTTGTTCTCTC+AGG + chr8_3:51772053-51772072 Msa1294080:intron 20.0%
!! TATACCTAAATAGAAAAGTT+AGG + chr8_3:51772227-51772246 Msa1294080:intron 20.0%
!! ATAAAACAACTAGTAAAGAA+GGG - chr8_3:51772301-51772320 None:intergenic 20.0%
!! AAATCATTAGAAAGAAAGTT+GGG - chr8_3:51772391-51772410 None:intergenic 20.0%
!! TAAATCATTAGAAAGAAAGT+TGG - chr8_3:51772392-51772411 None:intergenic 20.0%
!! TTCTTTGATATTACTATTTC+TGG - chr8_3:51772528-51772547 None:intergenic 20.0%
!! AGTAATATCAAAGAAAGTTA+AGG + chr8_3:51772533-51772552 Msa1294080:intron 20.0%
!! GTAATATCAAAGAAAGTTAA+GGG + chr8_3:51772534-51772553 Msa1294080:intron 20.0%
!! GTAGAAGAAATATAATTTCA+GGG - chr8_3:51772672-51772691 None:intergenic 20.0%
!! AGTAGAAGAAATATAATTTC+AGG - chr8_3:51772673-51772692 None:intergenic 20.0%
!!! CAATAATTATTTTATGAAGC+GGG - chr8_3:51773129-51773148 None:intergenic 20.0%
!! TATTGTTACATTTAATATCC+AGG + chr8_3:51773144-51773163 Msa1294080:intron 20.0%
!!! TTTTCTTCTTTCAACATTAA+AGG - chr8_3:51773578-51773597 None:intergenic 20.0%
!! TTCATTAATATACATGTATC+AGG - chr8_3:51773935-51773954 None:intergenic 20.0%
!!! GTGTAAATTTTATATTCAGA+GGG - chr8_3:51775405-51775424 None:intergenic 20.0%
!! CAAGATAAGAAAGATATAAT+AGG - chr8_3:51775522-51775541 None:intergenic 20.0%
!! TCTATAATAAGAAGTCTATA+TGG + chr8_3:51775759-51775778 Msa1294080:intron 20.0%
!!! ATTCTTTAAGTTTAATCATG+AGG + chr8_3:51775884-51775903 Msa1294080:intron 20.0%
!! GTTACCAAAAAAATATGATT+TGG + chr8_3:51775955-51775974 Msa1294080:intron 20.0%
!! TTATCATTACCAAATTATTG+GGG - chr8_3:51777324-51777343 None:intergenic 20.0%
!!! TTTCACTTGATATTTTTTTG+GGG + chr8_3:51777649-51777668 Msa1294080:three_prime_UTR 20.0%
!!! AGAAATTTTGTCTTCAAATA+AGG + chr8_3:51777681-51777700 Msa1294080:three_prime_UTR 20.0%
!!! AATAAGGAGATTTGTTTTAA+AGG + chr8_3:51777697-51777716 Msa1294080:three_prime_UTR 20.0%
!! AATAAATAAGACTAATCCAA+AGG - chr8_3:51777723-51777742 None:intergenic 20.0%
!!! TAATTTGTGTTCTTTTTTTG+AGG + chr8_3:51777795-51777814 Msa1294080:three_prime_UTR 20.0%
!!! AATTTGTGTTCTTTTTTTGA+GGG + chr8_3:51777796-51777815 Msa1294080:three_prime_UTR 20.0%
!!! CTTTTCAATTTGCTTCTTAT+TGG + chr8_3:51769894-51769913 Msa1294080:CDS 25.0%
! TTGGATTGATAAATTCAAAC+AGG + chr8_3:51769913-51769932 Msa1294080:CDS 25.0%
!! TGTTGTTTACTTTGCTTAAT+TGG + chr8_3:51769979-51769998 Msa1294080:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+AGG + chr8_3:51770051-51770070 Msa1294080:intron 25.0%
! TACAATATTTAGACCTTGTT+TGG - chr8_3:51770067-51770086 None:intergenic 25.0%
! GTCTAAATATTGTATTGTAC+CGG + chr8_3:51770181-51770200 Msa1294080:intron 25.0%
!! TAAAGATTTGTTTATGCAGT+AGG + chr8_3:51770346-51770365 Msa1294080:intron 25.0%
! ACCGCTAATGTAAAAAATAT+AGG - chr8_3:51770458-51770477 None:intergenic 25.0%
!! TTTGTTCTAGTGATATGTTT+TGG + chr8_3:51770591-51770610 Msa1294080:intron 25.0%
!!! AATAAAACAACTTTTGAAGG+AGG + chr8_3:51770661-51770680 Msa1294080:CDS 25.0%
!!! ATTACTAGCTTCTTTTTTCA+CGG - chr8_3:51770833-51770852 None:intergenic 25.0%
!! GTTGATATTGATTATCTGAA+AGG + chr8_3:51771120-51771139 Msa1294080:intron 25.0%
!! TGATATTGATTATCTGAAAG+GGG + chr8_3:51771122-51771141 Msa1294080:intron 25.0%
! AGTTTCTATTGTTTGAAAGA+TGG + chr8_3:51771162-51771181 Msa1294080:intron 25.0%
!!! AAGAAAAATAAGGTATTGGA+TGG - chr8_3:51771227-51771246 None:intergenic 25.0%
!!! ATGATAAGTTGGTTTAATCA+GGG - chr8_3:51771253-51771272 None:intergenic 25.0%
!!! AATGATAAGTTGGTTTAATC+AGG - chr8_3:51771254-51771273 None:intergenic 25.0%
! ACAATTGTCAAATGATAAGT+TGG - chr8_3:51771264-51771283 None:intergenic 25.0%
! AATATCTTAACGATGGTATA+TGG + chr8_3:51771333-51771352 Msa1294080:intron 25.0%
!! ATGCAATGTAATGGAAATTT+GGG - chr8_3:51771373-51771392 None:intergenic 25.0%
!!! CATTGATGATGAAATATTGA+AGG + chr8_3:51771747-51771766 Msa1294080:intron 25.0%
!!! TTGATGATGAAATATTGAAG+GGG + chr8_3:51771749-51771768 Msa1294080:intron 25.0%
! TACAGGATTCTATATAAATG+TGG + chr8_3:51772161-51772180 Msa1294080:intron 25.0%
!! GAATCCTAACTTTTCTATTT+AGG - chr8_3:51772234-51772253 None:intergenic 25.0%
! CATAAAACAACTAGTAAAGA+AGG - chr8_3:51772302-51772321 None:intergenic 25.0%
!!! CTTCTTTACTAGTTGTTTTA+TGG + chr8_3:51772300-51772319 Msa1294080:intron 25.0%
! AATCATTAGAAAGAAAGTTG+GGG - chr8_3:51772390-51772409 None:intergenic 25.0%
! TATATTTCTTCTACTATTGC+CGG + chr8_3:51772678-51772697 Msa1294080:intron 25.0%
!! CAGTTTACATATTTTCGTTA+CGG + chr8_3:51773252-51773271 Msa1294080:intron 25.0%
!!! CACATTTAATTTTGCTTATC+TGG + chr8_3:51773318-51773337 Msa1294080:CDS 25.0%
!!! TAATTTTGCTTATCTGGTTT+TGG + chr8_3:51773324-51773343 Msa1294080:CDS 25.0%
! ATCATAATTGCATTACCAAA+TGG - chr8_3:51773389-51773408 None:intergenic 25.0%
! TCAATATTATATTACACCAC+TGG - chr8_3:51773610-51773629 None:intergenic 25.0%
!! TTTTCTTCTTTCAACGTTAA+AGG - chr8_3:51773639-51773658 None:intergenic 25.0%
! TTAATGATTAGGAGCTAAAA+AGG - chr8_3:51773832-51773851 None:intergenic 25.0%
!!! AGAAGTTTTTTAAATCCACA+TGG - chr8_3:51773970-51773989 None:intergenic 25.0%
! AAAATAAATAAAAAGGCTCG+CGG - chr8_3:51774185-51774204 None:intergenic 25.0%
! ATATTAATAGAACACTGGAT+GGG - chr8_3:51774848-51774867 None:intergenic 25.0%
! ATCCAGTGTTCTATTAATAT+GGG + chr8_3:51774848-51774867 Msa1294080:intron 25.0%
!! GGTGTAAATTTTATATTCAG+AGG - chr8_3:51775406-51775425 None:intergenic 25.0%
! TTTACACCAATGAATAGAAT+AGG + chr8_3:51775418-51775437 Msa1294080:intron 25.0%
! CTTCTTATTATAGATCACTA+TGG - chr8_3:51775753-51775772 None:intergenic 25.0%
!!! TATTTTTTTGGTAACTTCCT+TGG - chr8_3:51775950-51775969 None:intergenic 25.0%
! TAAGAATAACCATAGACTTA+TGG - chr8_3:51776015-51776034 None:intergenic 25.0%
!!! AATTTTTCAACAGAAGATCT+GGG + chr8_3:51776085-51776104 Msa1294080:intron 25.0%
!! TTTTACATTATAGTGTCACA+AGG - chr8_3:51776223-51776242 None:intergenic 25.0%
!!! ATTCATTTTTGGATTTGGTA+AGG - chr8_3:51776501-51776520 None:intergenic 25.0%
!! TCAATAACAGGATTCATTTT+TGG - chr8_3:51776512-51776531 None:intergenic 25.0%
!! ATGACTCAAACTTTGTTATA+TGG + chr8_3:51776618-51776637 Msa1294080:intron 25.0%
! TTTAGTAGACATATTTGAAG+TGG + chr8_3:51776809-51776828 Msa1294080:intron 25.0%
!! TTAGTAGACATATTTGAAGT+GGG + chr8_3:51776810-51776829 Msa1294080:intron 25.0%
! TCTTTGTGTAAAGTATACTA+AGG - chr8_3:51777022-51777041 None:intergenic 25.0%
! AAATTGCATATACAATCTAC+TGG + chr8_3:51777179-51777198 Msa1294080:intron 25.0%
! TTAAGATTAGAGTAAAACTG+AGG - chr8_3:51777247-51777266 None:intergenic 25.0%
! TCTAATCTTAAGTAGTAAGT+TGG + chr8_3:51777256-51777275 Msa1294080:intron 25.0%
! TTTATTTGTAAACTCACGTA+TGG + chr8_3:51777459-51777478 Msa1294080:CDS 25.0%
! TATATGATATGCATTTCTTC+AGG + chr8_3:51777610-51777629 Msa1294080:three_prime_UTR 25.0%
! ATATGATATGCATTTCTTCA+GGG + chr8_3:51777611-51777630 Msa1294080:three_prime_UTR 25.0%
! TTCTATTGTATCCAAAAAGA+GGG + chr8_3:51777823-51777842 Msa1294080:three_prime_UTR 25.0%
! ACAAATGTTGATTATTCGCA+TGG - chr8_3:51769664-51769683 None:intergenic 30.0%
CGAATAATCAACATTTGTCA+TGG + chr8_3:51769666-51769685 Msa1294080:five_prime_UTR 30.0%
! CTCGTTTAAGATGAAAAAAC+TGG - chr8_3:51769741-51769760 None:intergenic 30.0%
ATCTTGAATTGAATCGATGA+TGG + chr8_3:51769814-51769833 Msa1294080:exon 30.0%
TCTTGAATTGAATCGATGAT+GGG + chr8_3:51769815-51769834 Msa1294080:exon 30.0%
AGAACGATTAAGAATATGAG+AGG - chr8_3:51769872-51769891 None:intergenic 30.0%
! CGTTGTTTCGTTATTTGAAT+TGG + chr8_3:51770008-51770027 Msa1294080:intron 30.0%
TGTTCTATTCAAATTCCTCT+TGG + chr8_3:51770377-51770396 Msa1294080:intron 30.0%
CACTCTATCAATATCAAACA+CGG - chr8_3:51770505-51770524 None:intergenic 30.0%
! TGATATTGATAGAGTGCTAT+CGG + chr8_3:51770509-51770528 Msa1294080:intron 30.0%
AACCAGTTTCTTTCTATTGT+AGG - chr8_3:51770735-51770754 None:intergenic 30.0%
!! TACATGCTCTGAATTGATTT+TGG - chr8_3:51770769-51770788 None:intergenic 30.0%
AAATCAATTCAGAGCATGTA+TGG + chr8_3:51770769-51770788 Msa1294080:intron 30.0%
! CAACTTTTGAATTAAACGCT+TGG - chr8_3:51770953-51770972 None:intergenic 30.0%
!! AGCGTTTGTTATAAATAACG+TGG - chr8_3:51770992-51771011 None:intergenic 30.0%
AGTTGTTTAGATTACCGTTA+AGG + chr8_3:51771046-51771065 Msa1294080:intron 30.0%
GTTGTTTAGATTACCGTTAA+GGG + chr8_3:51771047-51771066 Msa1294080:intron 30.0%
TAGTTTCCATTCTTCAAACA+TGG + chr8_3:51771087-51771106 Msa1294080:intron 30.0%
TTCTATTGTTTGAAAGATGG+TGG + chr8_3:51771165-51771184 Msa1294080:intron 30.0%
ATTGGATGGATGAAATGAAA+TGG - chr8_3:51771213-51771232 None:intergenic 30.0%
!! TGATAAGTTGGTTTAATCAG+GGG - chr8_3:51771252-51771271 None:intergenic 30.0%
! AATGTAATGGAAATTTGGGA+TGG - chr8_3:51771369-51771388 None:intergenic 30.0%
! GATGCAATGTAATGGAAATT+TGG - chr8_3:51771374-51771393 None:intergenic 30.0%
AACTAACAGATGCAATGTAA+TGG - chr8_3:51771382-51771401 None:intergenic 30.0%
TTTGATACGGATCATATACT+GGG - chr8_3:51771429-51771448 None:intergenic 30.0%
! TCAGGGATATTCTTTTCATT+GGG - chr8_3:51771475-51771494 None:intergenic 30.0%
! ATCAGGGATATTCTTTTCAT+TGG - chr8_3:51771476-51771495 None:intergenic 30.0%
ATTGATCTTAATAGTAGAGC+TGG + chr8_3:51771593-51771612 Msa1294080:intron 30.0%
CACAAGACTGATAAAATCTA+GGG + chr8_3:51771616-51771635 Msa1294080:intron 30.0%
TAAAGACTGACCAAGATATT+TGG + chr8_3:51771965-51771984 Msa1294080:intron 30.0%
TCAAGTTTCACCAAATATCT+TGG - chr8_3:51771978-51771997 None:intergenic 30.0%
CATAGAGCGATGAAAATAAA+CGG - chr8_3:51772005-51772024 None:intergenic 30.0%
! GTGTAAGTTATTTCACATAC+AGG + chr8_3:51772144-51772163 Msa1294080:intron 30.0%
TAGATGAAAGATAGTCCAAT+AGG - chr8_3:51772274-51772293 None:intergenic 30.0%
! GTCTTGATCTTATCTAGTTT+GGG - chr8_3:51772339-51772358 None:intergenic 30.0%
AGTCTTGATCTTATCTAGTT+TGG - chr8_3:51772340-51772359 None:intergenic 30.0%
AACACACTATGTAATACTCA+CGG + chr8_3:51772603-51772622 Msa1294080:intron 30.0%
ATTTCCCTAATAGTGAAACT+AGG + chr8_3:51772736-51772755 Msa1294080:intron 30.0%
GTATCCTAGTTTCACTATTA+GGG - chr8_3:51772743-51772762 None:intergenic 30.0%
ATTCACTATGAAAACTGTAG+CGG - chr8_3:51772765-51772784 None:intergenic 30.0%
GCTATTTGACAACATTGTTA+GGG + chr8_3:51772822-51772841 Msa1294080:intron 30.0%
!! ATTATTTTATGAAGCGGGAA+AGG - chr8_3:51773124-51773143 None:intergenic 30.0%
TCATCATGTAAATTATGACC+TGG - chr8_3:51773165-51773184 None:intergenic 30.0%
AGGTCATAATTTACATGATG+AGG + chr8_3:51773164-51773183 Msa1294080:intron 30.0%
! TTTACATATTTTCGTTACGG+AGG + chr8_3:51773255-51773274 Msa1294080:intron 30.0%
AAGAAAACAATGTATTCCAG+TGG + chr8_3:51773591-51773610 Msa1294080:intron 30.0%
AGATTATTATCTTGGAAGAC+TGG + chr8_3:51773705-51773724 Msa1294080:CDS 30.0%
GAACAGCACATTTAATGATT+AGG - chr8_3:51773843-51773862 None:intergenic 30.0%
TTAAATCCACATGGACATTT+GGG - chr8_3:51773961-51773980 None:intergenic 30.0%
TTTAAATCCACATGGACATT+TGG - chr8_3:51773962-51773981 None:intergenic 30.0%
GTGGATTTAAAAAACTTCTC+TGG + chr8_3:51773971-51773990 Msa1294080:intron 30.0%
TATTATCCATGCTATCTTAC+TGG - chr8_3:51774021-51774040 None:intergenic 30.0%
TGTGTTATGTATTAGGATAG+CGG - chr8_3:51774113-51774132 None:intergenic 30.0%
GGATAGTTGTGTTATGTATT+AGG - chr8_3:51774120-51774139 None:intergenic 30.0%
ATAACACAACTATCCACATT+GGG + chr8_3:51774125-51774144 Msa1294080:intron 30.0%
! TCCAAATATCTCCATTTTAC+AGG + chr8_3:51774156-51774175 Msa1294080:intron 30.0%
! CCAAATATCTCCATTTTACA+GGG + chr8_3:51774157-51774176 Msa1294080:intron 30.0%
TAATCTCGATCAACAATAAC+TGG - chr8_3:51774354-51774373 None:intergenic 30.0%
TATTGTTGATCGAGATTAAG+CGG + chr8_3:51774356-51774375 Msa1294080:intron 30.0%
GTTTGTCTGATATCTTACAA+TGG + chr8_3:51774609-51774628 Msa1294080:intron 30.0%
!!! TGTTTCTTCTGCTTGTTTTT+TGG + chr8_3:51774762-51774781 Msa1294080:intron 30.0%
!!! CTATTATTTTTGGAGGTGAT+TGG + chr8_3:51774799-51774818 Msa1294080:intron 30.0%
TATTAATAGAACACTGGATG+GGG - chr8_3:51774847-51774866 None:intergenic 30.0%
CATATTAATAGAACACTGGA+TGG - chr8_3:51774849-51774868 None:intergenic 30.0%
CATCCAGTGTTCTATTAATA+TGG + chr8_3:51774847-51774866 Msa1294080:intron 30.0%
ATGTAACTGATAATCAGTAG+TGG + chr8_3:51774884-51774903 Msa1294080:intron 30.0%
GTGTATCCTATTCTATTCAT+TGG - chr8_3:51775427-51775446 None:intergenic 30.0%
ATTGTCATTCTCATTTCTCA+AGG + chr8_3:51775579-51775598 Msa1294080:intron 30.0%
! TAATTTGCCTACATCATCAT+TGG + chr8_3:51775695-51775714 Msa1294080:intron 30.0%
! GAGATTATTTAAAGCCATGT+GGG - chr8_3:51775824-51775843 None:intergenic 30.0%
CAGATCTTCTGTTGAAAAAT+TGG - chr8_3:51776086-51776105 None:intergenic 30.0%
!! CAATTTTTCAACAGAAGATC+TGG + chr8_3:51776084-51776103 Msa1294080:intron 30.0%
TATTTGCCAACATGCTAATT+TGG - chr8_3:51776198-51776217 None:intergenic 30.0%
! TCATTTAAGATGATCTAGTC+TGG + chr8_3:51776244-51776263 Msa1294080:intron 30.0%
ATTACAATTAGCTCGAGATA+TGG - chr8_3:51776394-51776413 None:intergenic 30.0%
!!! GTGATTTTTTCTAAAGACTG+TGG + chr8_3:51776428-51776447 Msa1294080:intron 30.0%
!! ACAGGATTCATTTTTGGATT+TGG - chr8_3:51776506-51776525 None:intergenic 30.0%
!!! CTTTGTTTCTTGTTTTGCAA+GGG - chr8_3:51776562-51776581 None:intergenic 30.0%
!!! ACTTTGTTTCTTGTTTTGCA+AGG - chr8_3:51776563-51776582 None:intergenic 30.0%
! ACTCAAACTTTGTTATATGG+AGG + chr8_3:51776621-51776640 Msa1294080:intron 30.0%
! TAGTAGACATATTTGAAGTG+GGG + chr8_3:51776811-51776830 Msa1294080:intron 30.0%
TGTACATCATTTATGTGCAA+AGG + chr8_3:51776951-51776970 Msa1294080:intron 30.0%
TTTGGTTGACATCAATTGAA+GGG - chr8_3:51777080-51777099 None:intergenic 30.0%
ATTTGGTTGACATCAATTGA+AGG - chr8_3:51777081-51777100 None:intergenic 30.0%
!! ATAATCTTTAACTGGTTCTG+AGG + chr8_3:51777105-51777124 Msa1294080:intron 30.0%
!! TAATCTTTAACTGGTTCTGA+GGG + chr8_3:51777106-51777125 Msa1294080:intron 30.0%
! TCATGATTTTCTGTAGCAAA+TGG + chr8_3:51777285-51777304 Msa1294080:intron 30.0%
GAATGACATTCACAAACTAT+TGG - chr8_3:51777369-51777388 None:intergenic 30.0%
CTGATATTATATGTCATTGC+AGG + chr8_3:51777392-51777411 Msa1294080:intron 30.0%
TATTATATGTCATTGCAGGT+TGG + chr8_3:51777396-51777415 Msa1294080:intron 30.0%
!! ACAAATAAATTTGCTAACCC+TGG - chr8_3:51777448-51777467 None:intergenic 30.0%
!!! AGATTTGTTTTAAAGGCCTT+TGG + chr8_3:51777704-51777723 Msa1294080:three_prime_UTR 30.0%
GTTCTATTGTATCCAAAAAG+AGG + chr8_3:51777822-51777841 Msa1294080:three_prime_UTR 30.0%
CGCAATGCATTTAGAGAATA+AGG - chr8_3:51769955-51769974 None:intergenic 35.0%
TTCAACGTAATCACAAGTGT+TGG + chr8_3:51770255-51770274 Msa1294080:intron 35.0%
AGTATCTGTGCAACAGAAAT+TGG + chr8_3:51770323-51770342 Msa1294080:intron 35.0%
!! ATATTCTCTAAGACACTGAC+AGG + chr8_3:51770553-51770572 Msa1294080:intron 35.0%
!!! TAGTGATATGTTTTGGCTAC+AGG + chr8_3:51770598-51770617 Msa1294080:intron 35.0%
!!! AGTGATATGTTTTGGCTACA+GGG + chr8_3:51770599-51770618 Msa1294080:intron 35.0%
! AGATAGTGGTTTCAAAAGCA+CGG - chr8_3:51770712-51770731 None:intergenic 35.0%
CTTTCTATTGTAGGAGATAG+TGG - chr8_3:51770726-51770745 None:intergenic 35.0%
CTCCTACAATAGAAAGAAAC+TGG + chr8_3:51770730-51770749 Msa1294080:intron 35.0%
!!! GAAAGAAACTGGTTTTTCTG+CGG + chr8_3:51770741-51770760 Msa1294080:intron 35.0%
TAACGAATTGAGCATGTGTT+TGG - chr8_3:51770902-51770921 None:intergenic 35.0%
! ATAACAAACGCTGTTACTTC+AGG + chr8_3:51771000-51771019 Msa1294080:intron 35.0%
TTTAGATTACCGTTAAGGGA+TGG + chr8_3:51771051-51771070 Msa1294080:intron 35.0%
TTTCCATTCTTCAAACATGG+TGG + chr8_3:51771090-51771109 Msa1294080:intron 35.0%
TTTCCACCATGTTTGAAGAA+TGG - chr8_3:51771096-51771115 None:intergenic 35.0%
! TATTGATTATCTGAAAGGGG+TGG + chr8_3:51771125-51771144 Msa1294080:intron 35.0%
GGGGAAGAAAAATAAGGTAT+TGG - chr8_3:51771231-51771250 None:intergenic 35.0%
!! ATAAGTTGGTTTAATCAGGG+GGG - chr8_3:51771250-51771269 None:intergenic 35.0%
!! GATAAGTTGGTTTAATCAGG+GGG - chr8_3:51771251-51771270 None:intergenic 35.0%
GTTTGATACGGATCATATAC+TGG - chr8_3:51771430-51771449 None:intergenic 35.0%
! TATTCTTTTCATTGGGGGAT+GGG - chr8_3:51771468-51771487 None:intergenic 35.0%
! ATATTCTTTTCATTGGGGGA+TGG - chr8_3:51771469-51771488 None:intergenic 35.0%
! AGGGATATTCTTTTCATTGG+GGG - chr8_3:51771473-51771492 None:intergenic 35.0%
! CAGGGATATTCTTTTCATTG+GGG - chr8_3:51771474-51771493 None:intergenic 35.0%
TCATGGATACAATCTTGTGT+GGG + chr8_3:51771511-51771530 Msa1294080:intron 35.0%
GCACAAGACTGATAAAATCT+AGG + chr8_3:51771615-51771634 Msa1294080:intron 35.0%
! TGATAAAATCTAGGGTCAAC+TGG + chr8_3:51771624-51771643 Msa1294080:intron 35.0%
AACTGGTCATTGAAAGTTAG+AGG + chr8_3:51771641-51771660 Msa1294080:intron 35.0%
ACTGGTCATTGAAAGTTAGA+GGG + chr8_3:51771642-51771661 Msa1294080:intron 35.0%
TCCCTATGTTTCAGATATGT+TGG + chr8_3:51771697-51771716 Msa1294080:intron 35.0%
! GCCAACATATCTGAAACATA+GGG - chr8_3:51771701-51771720 None:intergenic 35.0%
! AGCCAACATATCTGAAACAT+AGG - chr8_3:51771702-51771721 None:intergenic 35.0%
!! AAGCATCGATATGATTGCTA+AGG + chr8_3:51771793-51771812 Msa1294080:intron 35.0%
!! AGCATCGATATGATTGCTAA+GGG + chr8_3:51771794-51771813 Msa1294080:intron 35.0%
TTGGTCAGTCTTTACGATAT+GGG - chr8_3:51771959-51771978 None:intergenic 35.0%
GATAGTCCAATAGGTATAGA+GGG - chr8_3:51772265-51772284 None:intergenic 35.0%
AGATAGTCCAATAGGTATAG+AGG - chr8_3:51772266-51772285 None:intergenic 35.0%
TCAAAGAAAGTTAAGGGAAC+TGG + chr8_3:51772540-51772559 Msa1294080:intron 35.0%
ACACACTATGTAATACTCAC+GGG + chr8_3:51772604-51772623 Msa1294080:intron 35.0%
GGTATCCTAGTTTCACTATT+AGG - chr8_3:51772744-51772763 None:intergenic 35.0%
TTGTCAAATAGCGCTAATAG+CGG - chr8_3:51772814-51772833 None:intergenic 35.0%
CGCTATTTGACAACATTGTT+AGG + chr8_3:51772821-51772840 Msa1294080:intron 35.0%
! ATCCTCTTTGCAGTTTTCTA+AGG + chr8_3:51772863-51772882 Msa1294080:intron 35.0%
TTCCTTAGAAAACTGCAAAG+AGG - chr8_3:51772868-51772887 None:intergenic 35.0%
AAAAAACATCAGCTCAAGAG+CGG - chr8_3:51772908-51772927 None:intergenic 35.0%
!! TTTGTTTCTCATCCTTTTGC+TGG + chr8_3:51772936-51772955 Msa1294080:intron 35.0%
TACAAAGACAAACCAGCAAA+AGG - chr8_3:51772951-51772970 None:intergenic 35.0%
!!! TTTTGCTGGTTTGTCTTTGT+AGG + chr8_3:51772950-51772969 Msa1294080:intron 35.0%
GAAAGCTCTATTCATCACAA+AGG + chr8_3:51773203-51773222 Msa1294080:CDS 35.0%
AGGCTGATAAGATACATATG+TGG + chr8_3:51773275-51773294 Msa1294080:intron 35.0%
CATATGTGGTCATTGTTTGT+AGG + chr8_3:51773289-51773308 Msa1294080:intron 35.0%
CAAATGGAGGATAGAGTTTA+TGG - chr8_3:51773437-51773456 None:intergenic 35.0%
CATAAACTCTATCCTCCATT+TGG + chr8_3:51773435-51773454 Msa1294080:intron 35.0%
AAAGAAAGAAAGATGGACAC+TGG - chr8_3:51773504-51773523 None:intergenic 35.0%
TGTCCATCTTTCTTTCTTTC+TGG + chr8_3:51773505-51773524 Msa1294080:intron 35.0%
GTCCATCTTTCTTTCTTTCT+GGG + chr8_3:51773506-51773525 Msa1294080:intron 35.0%
ATCCCAGAAAGAAAGAAAGA+TGG - chr8_3:51773511-51773530 None:intergenic 35.0%
TTGCAGGGAGATTATTATCT+TGG + chr8_3:51773697-51773716 Msa1294080:intron 35.0%
TTATTATCTTGGAAGACTGG+AGG + chr8_3:51773708-51773727 Msa1294080:CDS 35.0%
ATGATTAGGAGCTAAAAAGG+CGG - chr8_3:51773829-51773848 None:intergenic 35.0%
TCTGGTATCAATTGAAGTCT+TGG + chr8_3:51773989-51774008 Msa1294080:intron 35.0%
TAGCATGGATAATATCGTAG+TGG + chr8_3:51774027-51774046 Msa1294080:intron 35.0%
AGCATGGATAATATCGTAGT+GGG + chr8_3:51774028-51774047 Msa1294080:intron 35.0%
! TATGTATTAGGATAGCGGTA+TGG - chr8_3:51774108-51774127 None:intergenic 35.0%
CATAACACAACTATCCACAT+TGG + chr8_3:51774124-51774143 Msa1294080:intron 35.0%
CCCTGTAAAATGGAGATATT+TGG - chr8_3:51774160-51774179 None:intergenic 35.0%
!! GAAGTCAAAAGTACTATGCT+AGG - chr8_3:51774307-51774326 None:intergenic 35.0%
TCAGAATAAAGCTGTTCTGT+TGG + chr8_3:51774456-51774475 Msa1294080:intron 35.0%
ATTGTCACGTTGAAGATGTT+AGG - chr8_3:51774557-51774576 None:intergenic 35.0%
! ACAAAACAGTGTTGAAGAGT+CGG - chr8_3:51774743-51774762 None:intergenic 35.0%
AAAATAATAGAGCAGTGACG+TGG - chr8_3:51774789-51774808 None:intergenic 35.0%
! CGTCACTGCTCTATTATTTT+TGG + chr8_3:51774789-51774808 Msa1294080:intron 35.0%
!!! CACTGCTCTATTATTTTTGG+AGG + chr8_3:51774792-51774811 Msa1294080:intron 35.0%
!!! TTGGCTTCAGTCTTTTTTCT+TGG + chr8_3:51774818-51774837 Msa1294080:intron 35.0%
CACCCATATTAATAGAACAC+TGG - chr8_3:51774853-51774872 None:intergenic 35.0%
CAGTGTTCTATTAATATGGG+TGG + chr8_3:51774851-51774870 Msa1294080:intron 35.0%
TGTTAGTAATGAATAGTGCC+AGG + chr8_3:51774910-51774929 Msa1294080:intron 35.0%
TGCAAAATGTTGTCCAACAA+TGG + chr8_3:51774950-51774969 Msa1294080:intron 35.0%
AAAATGTTGTCCAACAATGG+AGG + chr8_3:51774953-51774972 Msa1294080:intron 35.0%
AAATGTTGTCCAACAATGGA+GGG + chr8_3:51774954-51774973 Msa1294080:intron 35.0%
CATCAACTATCAAGCTATGA+AGG + chr8_3:51775014-51775033 Msa1294080:intron 35.0%
! ATTTTATATTCAGAGGGAGC+TGG - chr8_3:51775399-51775418 None:intergenic 35.0%
ATAGAATAGGATACACGACT+AGG + chr8_3:51775431-51775450 Msa1294080:intron 35.0%
TAGAATAGGATACACGACTA+GGG + chr8_3:51775432-51775451 Msa1294080:intron 35.0%
! GTCAGCTTTTCATATCCTAT+TGG + chr8_3:51775454-51775473 Msa1294080:intron 35.0%
ATCTCATCACAATCCTTTGT+TGG - chr8_3:51775485-51775504 None:intergenic 35.0%
! TCCATCTAGGTTGACTTTAA+GGG - chr8_3:51775557-51775576 None:intergenic 35.0%
! ATCCATCTAGGTTGACTTTA+AGG - chr8_3:51775558-51775577 None:intergenic 35.0%
AGAATGACAATGATCCATCT+AGG - chr8_3:51775570-51775589 None:intergenic 35.0%
!! ATTGTCATCTAGCTCTTAGT+TGG + chr8_3:51775654-51775673 Msa1294080:intron 35.0%
! GGAGATTATTTAAAGCCATG+TGG - chr8_3:51775825-51775844 None:intergenic 35.0%
TTAAATAATCTCCCCAGGTT+TGG + chr8_3:51775832-51775851 Msa1294080:intron 35.0%
ATCAACAGTCCATAAGTCTA+TGG + chr8_3:51776003-51776022 Msa1294080:intron 35.0%
TAAGATGATCTAGTCTGGAA+AGG + chr8_3:51776249-51776268 Msa1294080:intron 35.0%
!! ATTTTGATGCAGAATGCAGA+TGG + chr8_3:51776467-51776486 Msa1294080:intron 35.0%
GATAAAATTTCCACTGAGGA+AGG - chr8_3:51776540-51776559 None:intergenic 35.0%
AAGGGATAAAATTTCCACTG+AGG - chr8_3:51776544-51776563 None:intergenic 35.0%
AATCGTCTATAGTGTGAGTT+TGG + chr8_3:51776644-51776663 Msa1294080:intron 35.0%
! TTCAATGAAAGAGCGTAACT+TGG + chr8_3:51776762-51776781 Msa1294080:intron 35.0%
! TCAATGAAAGAGCGTAACTT+GGG + chr8_3:51776763-51776782 Msa1294080:intron 35.0%
ACTTGGGAAAGGATTTAACA+AGG + chr8_3:51776779-51776798 Msa1294080:intron 35.0%
AGATCTTCGCTAAACACTTA+AGG + chr8_3:51776846-51776865 Msa1294080:intron 35.0%
GATCTTCGCTAAACACTTAA+GGG + chr8_3:51776847-51776866 Msa1294080:intron 35.0%
ATCTTCGCTAAACACTTAAG+GGG + chr8_3:51776848-51776867 Msa1294080:intron 35.0%
AGGATATCTTTGTAACCAGT+TGG + chr8_3:51776874-51776893 Msa1294080:intron 35.0%
AACACCTACATTCGAATTTG+AGG + chr8_3:51776905-51776924 Msa1294080:intron 35.0%
ACACCTACATTCGAATTTGA+GGG + chr8_3:51776906-51776925 Msa1294080:intron 35.0%
TTACCCTCAAATTCGAATGT+AGG - chr8_3:51776912-51776931 None:intergenic 35.0%
ATCAATTGAAGGGATGTTTG+GGG - chr8_3:51777070-51777089 None:intergenic 35.0%
CATCAATTGAAGGGATGTTT+GGG - chr8_3:51777071-51777090 None:intergenic 35.0%
ACATCAATTGAAGGGATGTT+TGG - chr8_3:51777072-51777091 None:intergenic 35.0%
AGATTAGAGTAAAACTGAGG+TGG - chr8_3:51777244-51777263 None:intergenic 35.0%
ATTACCAAATTATTGGGGTG+GGG - chr8_3:51777319-51777338 None:intergenic 35.0%
CATTACCAAATTATTGGGGT+GGG - chr8_3:51777320-51777339 None:intergenic 35.0%
TCATTACCAAATTATTGGGG+TGG - chr8_3:51777321-51777340 None:intergenic 35.0%
TAAACTCACGTATGGCAAAT+AGG + chr8_3:51777467-51777486 Msa1294080:CDS 35.0%
! GGATTTAAAACAGCAAGAAC+AGG + chr8_3:51777536-51777555 Msa1294080:three_prime_UTR 35.0%
ATGCATATCATATAACACGC+AGG - chr8_3:51777604-51777623 None:intergenic 35.0%
!!! TGTGTTCTTTTTTTGAGGGT+TGG + chr8_3:51777800-51777819 Msa1294080:three_prime_UTR 35.0%
! AAACTACTGTTCCCTCTTTT+TGG - chr8_3:51777837-51777856 None:intergenic 35.0%
TGTATAGCAAGTATGTCATG+AGG + chr8_3:51777871-51777890 Msa1294080:three_prime_UTR 35.0%
! GATAGTGGTTTCAAAAGCAC+GGG - chr8_3:51770711-51770730 None:intergenic 40.0%
! GAAGCTAGTAATTGCTGCTT+CGG + chr8_3:51770841-51770860 Msa1294080:intron 40.0%
GAATTAAACGCTTGGCACAA+AGG - chr8_3:51770945-51770964 None:intergenic 40.0%
ATTATCTGAAAGGGGTGGAA+TGG + chr8_3:51771130-51771149 Msa1294080:intron 40.0%
ATCAGGGGGGAAGAAAAATA+AGG - chr8_3:51771237-51771256 None:intergenic 40.0%
AAGGGCTCTATCGTTTGATA+CGG - chr8_3:51771442-51771461 None:intergenic 40.0%
! ATTCTTTTCATTGGGGGATG+GGG - chr8_3:51771467-51771486 None:intergenic 40.0%
AGAGCTGCATATTTGGATCA+GGG - chr8_3:51771492-51771511 None:intergenic 40.0%
ATCCAAATATGCAGCTCTCA+TGG + chr8_3:51771494-51771513 Msa1294080:intron 40.0%
ATCCATGAGAGCTGCATATT+TGG - chr8_3:51771499-51771518 None:intergenic 40.0%
CTCATGGATACAATCTTGTG+TGG + chr8_3:51771510-51771529 Msa1294080:intron 40.0%
AAAGTTAGAGGGTAAGCCTA+TGG + chr8_3:51771653-51771672 Msa1294080:intron 40.0%
GTGCATTTGGACAAAACCAT+AGG - chr8_3:51771672-51771691 None:intergenic 40.0%
CATAGGGAATAGTGTGCATT+TGG - chr8_3:51771685-51771704 None:intergenic 40.0%
TGATTGCTAAGGGAGATGTA+TGG + chr8_3:51771804-51771823 Msa1294080:intron 40.0%
CTTGGTCAGTCTTTACGATA+TGG - chr8_3:51771960-51771979 None:intergenic 40.0%
ATAGGTATAGAGGGAGACTA+AGG - chr8_3:51772256-51772275 None:intergenic 40.0%
TAGTCTCCCTCTATACCTAT+TGG + chr8_3:51772256-51772275 Msa1294080:intron 40.0%
GGCTCATGTTATTGAAAGGA+TGG - chr8_3:51772366-51772385 None:intergenic 40.0%
CATTAGAAAGAAAGTTGGGG+AGG - chr8_3:51772387-51772406 None:intergenic 40.0%
AGAACGTTGTGATAGGTAAG+TGG - chr8_3:51772443-51772462 None:intergenic 40.0%
!!! ACTGTAGTAGTTTTGGCTAG+CGG - chr8_3:51772709-51772728 None:intergenic 40.0%
CAACAACTTGTGCAACCATT+TGG + chr8_3:51773371-51773390 Msa1294080:CDS 40.0%
! TGAACTTTCTGCTCTTTTGC+AGG + chr8_3:51773681-51773700 Msa1294080:intron 40.0%
! GAACTTTCTGCTCTTTTGCA+GGG + chr8_3:51773682-51773701 Msa1294080:intron 40.0%
GAATCGTCGAGCAAAAGAAA+AGG - chr8_3:51773892-51773911 None:intergenic 40.0%
GAATAACCCAAATGTCCATG+TGG + chr8_3:51773952-51773971 Msa1294080:intron 40.0%
AGCTTTCCAGTAAGATAGCA+TGG + chr8_3:51774012-51774031 Msa1294080:intron 40.0%
!!! AGGCCACTTTTGTTCACATT+AGG + chr8_3:51774278-51774297 Msa1294080:intron 40.0%
CTGCCTAATGTGAACAAAAG+TGG - chr8_3:51774284-51774303 None:intergenic 40.0%
TCGATCAACAATAACTGGCT+AGG - chr8_3:51774349-51774368 None:intergenic 40.0%
TCACGTTGAAGATGTTAGGT+AGG - chr8_3:51774553-51774572 None:intergenic 40.0%
! CGTGACAATTTTCTGACTCT+TGG + chr8_3:51774568-51774587 Msa1294080:intron 40.0%
! TTCTGACTCTTGGACTGTTT+TGG + chr8_3:51774578-51774597 Msa1294080:intron 40.0%
!!! TTGGACTGTTTTGGTGTACA+TGG + chr8_3:51774587-51774606 Msa1294080:intron 40.0%
AATGTTGTCCAACAATGGAG+GGG + chr8_3:51774955-51774974 Msa1294080:intron 40.0%
CTATCAAGCTATGAAGGTGA+AGG + chr8_3:51775020-51775039 Msa1294080:intron 40.0%
TTCGTTGGCAAGTAGTTGTT+TGG - chr8_3:51775096-51775115 None:intergenic 40.0%
AAACAACTACTTGCCAACGA+AGG + chr8_3:51775095-51775114 Msa1294080:intron 40.0%
! TGCTGATAAGCATTGCCATA+TGG + chr8_3:51775150-51775169 Msa1294080:intron 40.0%
! TAAGCATTGCCATATGGAAG+AGG + chr8_3:51775156-51775175 Msa1294080:intron 40.0%
! TTGTTGGAAGGTGATGGTAA+AGG + chr8_3:51775273-51775292 Msa1294080:intron 40.0%
! TGTTGGAAGGTGATGGTAAA+GGG + chr8_3:51775274-51775293 Msa1294080:intron 40.0%
TTCTTATCTTGACCGCCAAA+CGG + chr8_3:51775531-51775550 Msa1294080:intron 40.0%
TTAAGTGCGTCAAGGTTTGT+TGG + chr8_3:51775788-51775807 Msa1294080:intron 40.0%
TTGGTTAGATGAATCCCACA+TGG + chr8_3:51775807-51775826 Msa1294080:intron 40.0%
!! TGGCTTTAAATAATCTCCCC+AGG + chr8_3:51775827-51775846 Msa1294080:intron 40.0%
GTATTGTCAAAAGCTCTCCA+AGG + chr8_3:51775930-51775949 Msa1294080:intron 40.0%
CTCCTTCCAAATTAGCATGT+TGG + chr8_3:51776189-51776208 Msa1294080:intron 40.0%
TGCCAACATGCTAATTTGGA+AGG - chr8_3:51776194-51776213 None:intergenic 40.0%
ACAGATTTACGACACTTGCT+GGG - chr8_3:51776332-51776351 None:intergenic 40.0%
AACAGATTTACGACACTTGC+TGG - chr8_3:51776333-51776352 None:intergenic 40.0%
AGACTGTGGCTACATATAGT+AGG + chr8_3:51776442-51776461 Msa1294080:intron 40.0%
AGGAAGGAACACTCAATAAC+AGG - chr8_3:51776524-51776543 None:intergenic 40.0%
AGACCACAATGTCTGAGTAT+TGG + chr8_3:51776592-51776611 Msa1294080:intron 40.0%
GACCACAATGTCTGAGTATT+GGG + chr8_3:51776593-51776612 Msa1294080:intron 40.0%
GTGAATAGAAGACTCGTTGA+AGG - chr8_3:51776724-51776743 None:intergenic 40.0%
TCATTGAACACTGGGTTTGA+GGG - chr8_3:51776750-51776769 None:intergenic 40.0%
TTCATTGAACACTGGGTTTG+AGG - chr8_3:51776751-51776770 None:intergenic 40.0%
ACGCTCTTTCATTGAACACT+GGG - chr8_3:51776758-51776777 None:intergenic 40.0%
TACGCTCTTTCATTGAACAC+TGG - chr8_3:51776759-51776778 None:intergenic 40.0%
TAGCGAAGATCTTACCTAAC+TGG - chr8_3:51776838-51776857 None:intergenic 40.0%
GTACAATGTAGTGCAGAAAG+CGG - chr8_3:51776983-51777002 None:intergenic 40.0%
!!! TTCTGAGGGTGGTTTTGAAT+TGG + chr8_3:51777120-51777139 Msa1294080:intron 40.0%
TTAGAGTAAAACTGAGGTGG+TGG - chr8_3:51777241-51777260 None:intergenic 40.0%
TTACCAAATTATTGGGGTGG+GGG - chr8_3:51777318-51777337 None:intergenic 40.0%
! TGCAGGTTGGAATAATACCT+TGG + chr8_3:51777409-51777428 Msa1294080:intron 40.0%
TTGGCTAGCAATATCTTCCA+GGG + chr8_3:51777428-51777447 Msa1294080:CDS 40.0%
CTTCATCGAGAATGACTGAT+TGG + chr8_3:51777500-51777519 Msa1294080:three_prime_UTR 40.0%
CATATCATATAACACGCAGG+AGG - chr8_3:51777601-51777620 None:intergenic 40.0%
AGATGTGTCAGTGTCATGTC+AGG - chr8_3:51770209-51770228 None:intergenic 45.0%
GCACAGATACTTCTGCTTGA+AGG - chr8_3:51770314-51770333 None:intergenic 45.0%
ACTATAACGCAGTTGCCAAG+AGG - chr8_3:51770395-51770414 None:intergenic 45.0%
!!! GATATGTTTTGGCTACAGGG+TGG + chr8_3:51770602-51770621 Msa1294080:intron 45.0%
! ACGGGTTACTTACTGCGAAA+GGG - chr8_3:51770693-51770712 None:intergenic 45.0%
TTCGGAAAAACGAGCGTCTA+GGG + chr8_3:51770859-51770878 Msa1294080:intron 45.0%
ATTACCGTTAAGGGATGGAG+TGG + chr8_3:51771056-51771075 Msa1294080:intron 45.0%
CATTCCACTCCATCCCTTAA+CGG - chr8_3:51771063-51771082 None:intergenic 45.0%
GTGGAATGAAGTGAACTCGT+TGG + chr8_3:51771184-51771203 Msa1294080:intron 45.0%
! TTCTTTTCATTGGGGGATGG+GGG - chr8_3:51771466-51771485 None:intergenic 45.0%
GAGAGCTGCATATTTGGATC+AGG - chr8_3:51771493-51771512 None:intergenic 45.0%
!! TTTTGCTGCTTGTGCAAAGG+TGG - chr8_3:51772083-51772102 None:intergenic 45.0%
!! GAGTTTTGCTGCTTGTGCAA+AGG - chr8_3:51772086-51772105 None:intergenic 45.0%
AGCAGCAAAACTCAGAAGAC+AGG + chr8_3:51772093-51772112 Msa1294080:CDS 45.0%
AGCAAAACTCAGAAGACAGG+CGG + chr8_3:51772096-51772115 Msa1294080:CDS 45.0%
GGGAGGCTCATGTTATTGAA+AGG - chr8_3:51772370-51772389 None:intergenic 45.0%
AGTGACGAGAACGTTGTGAT+AGG - chr8_3:51772450-51772469 None:intergenic 45.0%
GGAACTGGATCATCAATAGC+AGG + chr8_3:51772555-51772574 Msa1294080:intron 45.0%
GCTAGCCAAAACTACTACAG+TGG + chr8_3:51772708-51772727 Msa1294080:intron 45.0%
! AGCAGCCACTGTAGTAGTTT+TGG - chr8_3:51772716-51772735 None:intergenic 45.0%
TTTATGAAGCGGGAAAGGCA+GGG - chr8_3:51773119-51773138 None:intergenic 45.0%
! TTTTATGAAGCGGGAAAGGC+AGG - chr8_3:51773120-51773139 None:intergenic 45.0%
TGTTGAGATATGCTAGCCAC+AGG - chr8_3:51773356-51773375 None:intergenic 45.0%
! AGCACGTTTTCTCCAAATGG+AGG - chr8_3:51773450-51773469 None:intergenic 45.0%
TCCATTTGGAGAAAACGTGC+TGG + chr8_3:51773449-51773468 Msa1294080:intron 45.0%
! TCCAGCACGTTTTCTCCAAA+TGG - chr8_3:51773453-51773472 None:intergenic 45.0%
! ACACTGGACAGACTTTTGTG+CGG - chr8_3:51773488-51773507 None:intergenic 45.0%
TTGGAAAACTGTGCCCAATG+TGG - chr8_3:51774141-51774160 None:intergenic 45.0%
TGTTGATCGAGATTAAGCGG+AGG + chr8_3:51774359-51774378 Msa1294080:intron 45.0%
TGATTTCAAGAACTCGACCC+AGG - chr8_3:51774403-51774422 None:intergenic 45.0%
TGGGTCGAGTTCTTGAAATC+AGG + chr8_3:51774402-51774421 Msa1294080:intron 45.0%
! AAGCTGTTCTGTTGGTCTGT+TGG + chr8_3:51774464-51774483 Msa1294080:intron 45.0%
ACTTGGAATCGTCACCTGTA+CGG - chr8_3:51774510-51774529 None:intergenic 45.0%
TAGTCCAGTACAGACAAGGA+TGG + chr8_3:51774674-51774693 Msa1294080:intron 45.0%
AATGAATAGTGCCAGGCAAG+TGG + chr8_3:51774917-51774936 Msa1294080:intron 45.0%
ATGTTGTCCAACAATGGAGG+GGG + chr8_3:51774956-51774975 Msa1294080:intron 45.0%
! TGAATGGTGTCAAGAGACGA+TGG + chr8_3:51774985-51775004 Msa1294080:intron 45.0%
TGCCATATGACCATGGTAGA+GGG + chr8_3:51775201-51775220 Msa1294080:intron 45.0%
ATCACCTTCCAACAACCTCT+TGG - chr8_3:51775268-51775287 None:intergenic 45.0%
AAGAGGTTGTTGGAAGGTGA+TGG + chr8_3:51775267-51775286 Msa1294080:intron 45.0%
!! GAGGTAATGATGATGGTGCA+AGG + chr8_3:51775309-51775328 Msa1294080:intron 45.0%
ATGGTGCAAGGCAATTGTGA+CGG + chr8_3:51775321-51775340 Msa1294080:intron 45.0%
ATTGTGACGGTGGAGATTGT+CGG + chr8_3:51775334-51775353 Msa1294080:intron 45.0%
! CCTTTGTTGGTTGAGCCAAT+AGG - chr8_3:51775472-51775491 None:intergenic 45.0%
!! CCTATTGGCTCAACCAACAA+AGG + chr8_3:51775469-51775488 Msa1294080:intron 45.0%
GCCCTTAAAGTCAACCTAGA+TGG + chr8_3:51775553-51775572 Msa1294080:intron 45.0%
CTCAAGGCTTGCATTGTTGA+AGG + chr8_3:51775595-51775614 Msa1294080:intron 45.0%
! GCACAAGCCAATGATGATGT+AGG - chr8_3:51775705-51775724 None:intergenic 45.0%
GGAGCAAATTAAGTGCGTCA+AGG + chr8_3:51775780-51775799 Msa1294080:intron 45.0%
! TCTGGGACATATGATGCACT+TGG + chr8_3:51776102-51776121 Msa1294080:intron 45.0%
CTGGGACATATGATGCACTT+GGG + chr8_3:51776103-51776122 Msa1294080:intron 45.0%
! GATCTAGTCTGGAAAGGTAC+AGG + chr8_3:51776255-51776274 Msa1294080:intron 45.0%
ATTGAGTGTTCCTTCCTCAG+TGG + chr8_3:51776527-51776546 Msa1294080:intron 45.0%
TGCCCAATACTCAGACATTG+TGG - chr8_3:51776598-51776617 None:intergenic 45.0%
! GAAAGAGCGTAACTTGGGAA+AGG + chr8_3:51776768-51776787 Msa1294080:intron 45.0%
! ATTTGAAGTGGGGACCAGTT+AGG + chr8_3:51776821-51776840 Msa1294080:intron 45.0%
GCTAAACACTTAAGGGGAGT+AGG + chr8_3:51776854-51776873 Msa1294080:intron 45.0%
!! AGGTGTTGATCATGTCCAAC+TGG - chr8_3:51776892-51776911 None:intergenic 45.0%
TACACAAAGACTTTCACGCC+TGG + chr8_3:51777032-51777051 Msa1294080:intron 45.0%
TTGGGGAACTGTATTGAACC+AGG - chr8_3:51777053-51777072 None:intergenic 45.0%
!! TCTTTAACTGGTTCTGAGGG+TGG + chr8_3:51777109-51777128 Msa1294080:intron 45.0%
ATTCCCCCACCCCAATAATT+TGG + chr8_3:51777312-51777331 Msa1294080:intron 45.0%
CTGGAAGATATTGCTAGCCA+AGG - chr8_3:51777429-51777448 None:intergenic 45.0%
CTTGGCTAGCAATATCTTCC+AGG + chr8_3:51777427-51777446 Msa1294080:CDS 45.0%
! GAGAATGACTGATTGGTAGC+TGG + chr8_3:51777507-51777526 Msa1294080:three_prime_UTR 45.0%
! CTGATTGGTAGCTGGTATCA+TGG + chr8_3:51777515-51777534 Msa1294080:three_prime_UTR 45.0%
AGCAAGAACAGGACGTTACT+GGG + chr8_3:51777547-51777566 Msa1294080:three_prime_UTR 45.0%
TGTGACACGTGTCAGACATC+AGG + chr8_3:51770283-51770302 Msa1294080:intron 50.0%
GTGTGTCAGTGTTGTGTCAC+AGG + chr8_3:51770476-51770495 Msa1294080:intron 50.0%
ATCGCTTGCCAAACACGACA+AGG - chr8_3:51770535-51770554 None:intergenic 50.0%
! CACGGGTTACTTACTGCGAA+AGG - chr8_3:51770694-51770713 None:intergenic 50.0%
! TCCTTTTGATGCGCGTCTAG+TGG + chr8_3:51770799-51770818 Msa1294080:intron 50.0%
ACCACTAGACGCGCATCAAA+AGG - chr8_3:51770803-51770822 None:intergenic 50.0%
CTTCGGAAAAACGAGCGTCT+AGG + chr8_3:51770858-51770877 Msa1294080:intron 50.0%
TCGGAAAAACGAGCGTCTAG+GGG + chr8_3:51770860-51770879 Msa1294080:intron 50.0%
! TCTTTTCATTGGGGGATGGG+GGG - chr8_3:51771465-51771484 None:intergenic 50.0%
! TGTGTGTGCCTTTTGCAAGC+TGG + chr8_3:51771549-51771568 Msa1294080:intron 50.0%
! TGTGCCTTTTGCAAGCTGGT+AGG + chr8_3:51771553-51771572 Msa1294080:intron 50.0%
AACGCCTACCAGCTTGCAAA+AGG - chr8_3:51771560-51771579 None:intergenic 50.0%
GAAGGGGATTACTGACAGTC+TGG + chr8_3:51771765-51771784 Msa1294080:intron 50.0%
!!! GTTTTGGCTAGCGGATGTAC+CGG - chr8_3:51772700-51772719 None:intergenic 50.0%
ATAGCGGCGCTATAGCATAG+TGG - chr8_3:51772798-51772817 None:intergenic 50.0%
GAAAGGCAGGGAAACTAGAG+TGG - chr8_3:51773107-51773126 None:intergenic 50.0%
!!! CTGGTTTTGGAGTACTCCTG+TGG + chr8_3:51773337-51773356 Msa1294080:CDS 50.0%
GTGTCTGCTAGGTATTCACG+TGG - chr8_3:51773539-51773558 None:intergenic 50.0%
GTGAATACCTAGCAGACACG+TGG + chr8_3:51773540-51773559 Msa1294080:intron 50.0%
!! CGTTGGAAAGAGGTGTTCTG+CGG - chr8_3:51774244-51774263 None:intergenic 50.0%
TGAGTCAGTGCGTTGGAAAG+AGG - chr8_3:51774254-51774273 None:intergenic 50.0%
! TTTGACTTCCAGCGAGTTGC+TGG + chr8_3:51774318-51774337 Msa1294080:intron 50.0%
! TCTGAGACATCACGCAAGCT+AGG - chr8_3:51774441-51774460 None:intergenic 50.0%
! CTGTTCTGTTGGTCTGTTGG+TGG + chr8_3:51774467-51774486 Msa1294080:intron 50.0%
GTCCTTCTACTTTCCCGTAC+AGG + chr8_3:51774493-51774512 Msa1294080:intron 50.0%
CACCTGTACGGGAAAGTAGA+AGG - chr8_3:51774498-51774517 None:intergenic 50.0%
CTTGGAATCGTCACCTGTAC+GGG - chr8_3:51774509-51774528 None:intergenic 50.0%
!! GCTTCAAGCACTGGAACACT+TGG - chr8_3:51774527-51774546 None:intergenic 50.0%
! CCTTGTCTGTACTGGACTAG+TGG - chr8_3:51774673-51774692 None:intergenic 50.0%
CCACTAGTCCAGTACAGACA+AGG + chr8_3:51774670-51774689 Msa1294080:intron 50.0%
CCAACCATCCTTGTCTGTAC+TGG - chr8_3:51774681-51774700 None:intergenic 50.0%
CCAGTACAGACAAGGATGGT+TGG + chr8_3:51774678-51774697 Msa1294080:intron 50.0%
ATCACTACCCCCTCCATTGT+TGG - chr8_3:51774966-51774985 None:intergenic 50.0%
ATGGAGGGGGTAGTGATGAA+TGG + chr8_3:51774969-51774988 Msa1294080:intron 50.0%
! TGAAGGATACCAGAGAGTGC+TGG + chr8_3:51775037-51775056 Msa1294080:intron 50.0%
!! GAAGGATACCAGAGAGTGCT+GGG + chr8_3:51775038-51775057 Msa1294080:intron 50.0%
!! AAGGATACCAGAGAGTGCTG+GGG + chr8_3:51775039-51775058 Msa1294080:intron 50.0%
CTACTTGCCAACGAAGGTAG+TGG + chr8_3:51775101-51775120 Msa1294080:intron 50.0%
! CCAACGAAGGTAGTGGTTGA+GGG + chr8_3:51775108-51775127 Msa1294080:intron 50.0%
! AGGTAGTGGTTGAGGGTTCT+TGG + chr8_3:51775115-51775134 Msa1294080:intron 50.0%
TAGTGGTTGAGGGTTCTTGG+AGG + chr8_3:51775118-51775137 Msa1294080:intron 50.0%
GCATTGCCATATGGAAGAGG+TGG + chr8_3:51775159-51775178 Msa1294080:intron 50.0%
TCACTGCCACCTCTTCCATA+TGG - chr8_3:51775168-51775187 None:intergenic 50.0%
CAAGCAGTGCCATATGACCA+TGG + chr8_3:51775194-51775213 Msa1294080:intron 50.0%
GTGCCATATGACCATGGTAG+AGG + chr8_3:51775200-51775219 Msa1294080:intron 50.0%
CACCCTCTACCATGGTCATA+TGG - chr8_3:51775206-51775225 None:intergenic 50.0%
!! AGGTGATGGTAAAGGGTGTC+AGG + chr8_3:51775281-51775300 Msa1294080:intron 50.0%
GGCTGGAGAGGTAATGATGA+TGG + chr8_3:51775302-51775321 Msa1294080:intron 50.0%
TTGTGACGGTGGAGATTGTC+GGG + chr8_3:51775335-51775354 Msa1294080:intron 50.0%
! TCGGGTGGTGATGCTTGAAA+AGG + chr8_3:51775353-51775372 Msa1294080:intron 50.0%
! CGGGTGGTGATGCTTGAAAA+GGG + chr8_3:51775354-51775373 Msa1294080:intron 50.0%
! TGACTTTAAGGGCCGTTTGG+CGG - chr8_3:51775546-51775565 None:intergenic 50.0%
! GGTTGACTTTAAGGGCCGTT+TGG - chr8_3:51775549-51775568 None:intergenic 50.0%
!! ATCTCCCCAGGTTTGGTTTG+AGG + chr8_3:51775839-51775858 Msa1294080:intron 50.0%
TGCGTCCTCAAACCAAACCT+GGG - chr8_3:51775847-51775866 None:intergenic 50.0%
TTGCGTCCTCAAACCAAACC+TGG - chr8_3:51775848-51775867 None:intergenic 50.0%
CTTGCTGGGAAAGCAATGTC+TGG - chr8_3:51776318-51776337 None:intergenic 50.0%
CAGCAAGAACAGGACGTTAC+TGG + chr8_3:51777546-51777565 Msa1294080:three_prime_UTR 50.0%
TCATATAACACGCAGGAGGC+AGG - chr8_3:51777597-51777616 None:intergenic 50.0%
GTCAGTGTCATGTCAGGTGC+CGG - chr8_3:51770203-51770222 None:intergenic 55.0%
! GCTATCGGCCTTGTCGTGTT+TGG + chr8_3:51770524-51770543 Msa1294080:intron 55.0%
GCTACAGGGTGGATCTGAGA+AGG + chr8_3:51770613-51770632 Msa1294080:intron 55.0%
AAAACGAGCGTCTAGGGGCT+CGG + chr8_3:51770865-51770884 Msa1294080:intron 55.0%
GCTGCTTGTGCAAAGGTGGA+TGG - chr8_3:51772079-51772098 None:intergenic 55.0%
AGTCATGCCACGTGTCTGCT+AGG - chr8_3:51773550-51773569 None:intergenic 55.0%
CAGACACGTGGCATGACTCA+TGG + chr8_3:51773552-51773571 Msa1294080:intron 55.0%
GCTCGCGGTACCCTGTAAAA+TGG - chr8_3:51774170-51774189 None:intergenic 55.0%
CCTGAACTGAGTCAGTGCGT+TGG - chr8_3:51774261-51774280 None:intergenic 55.0%
!! CCAACGCACTGACTCAGTTC+AGG + chr8_3:51774258-51774277 Msa1294080:intron 55.0%
AGGTACAACCAGCAACTCGC+TGG - chr8_3:51774329-51774348 None:intergenic 55.0%
CGAGATTAAGCGGAGGACTG+TGG + chr8_3:51774366-51774385 Msa1294080:intron 55.0%
!! GGTAGGAGTGCTTCAAGCAC+TGG - chr8_3:51774536-51774555 None:intergenic 55.0%
!! GAAAACCGCGCTCTAGGAGA+GGG - chr8_3:51774721-51774740 None:intergenic 55.0%
!! AGGATACCAGAGAGTGCTGG+GGG + chr8_3:51775040-51775059 Msa1294080:intron 55.0%
! TGCGTGATGTTGGCTGTGGA+GGG + chr8_3:51775068-51775087 Msa1294080:intron 55.0%
! GCCAACGAAGGTAGTGGTTG+AGG + chr8_3:51775107-51775126 Msa1294080:intron 55.0%
CCCTCAACCACTACCTTCGT+TGG - chr8_3:51775111-51775130 None:intergenic 55.0%
!! CCATGGTAGAGGGTGTCATG+CGG + chr8_3:51775211-51775230 Msa1294080:intron 55.0%
GCAGCCAAGAGGTTGTTGGA+AGG + chr8_3:51775261-51775280 Msa1294080:intron 55.0%
!! GATGGTAAAGGGTGTCAGGC+TGG + chr8_3:51775285-51775304 Msa1294080:intron 55.0%
!! TAAAGGGTGTCAGGCTGGAG+AGG + chr8_3:51775290-51775309 Msa1294080:intron 55.0%
GTGCAAGGCAATTGTGACGG+TGG + chr8_3:51775324-51775343 Msa1294080:intron 55.0%
GCGTCCTCAAACCAAACCTG+GGG - chr8_3:51775846-51775865 None:intergenic 55.0%
ATAACACGCAGGAGGCAGGA+GGG - chr8_3:51777593-51777612 None:intergenic 55.0%
TATAACACGCAGGAGGCAGG+AGG - chr8_3:51777594-51777613 None:intergenic 55.0%
TCATTGGGGGATGGGGGGAA+GGG - chr8_3:51771460-51771479 None:intergenic 60.0%
TTCATTGGGGGATGGGGGGA+AGG - chr8_3:51771461-51771480 None:intergenic 60.0%
CAGAAGACAGGCGGCTGCAA+AGG + chr8_3:51772105-51772124 Msa1294080:CDS 60.0%
ACAGGCGGCTGCAAAGGAGA+AGG + chr8_3:51772111-51772130 Msa1294080:CDS 60.0%
AAGCGGAGGACTGTGGCTAG+TGG + chr8_3:51774373-51774392 Msa1294080:intron 60.0%
ACTGTGGCTAGTGGTGAGCC+TGG + chr8_3:51774382-51774401 Msa1294080:intron 60.0%
CTGTGGCTAGTGGTGAGCCT+GGG + chr8_3:51774383-51774402 Msa1294080:intron 60.0%
!! GGAAAACCGCGCTCTAGGAG+AGG - chr8_3:51774722-51774741 None:intergenic 60.0%
GAGTCGGAAAACCGCGCTCT+AGG - chr8_3:51774727-51774746 None:intergenic 60.0%
TAGTGCCAGGCAAGTGGCAG+AGG + chr8_3:51774923-51774942 Msa1294080:intron 60.0%
! AATCGCCTCTGCCACTTGCC+TGG - chr8_3:51774931-51774950 None:intergenic 60.0%
!! GGATACCAGAGAGTGCTGGG+GGG + chr8_3:51775041-51775060 Msa1294080:intron 60.0%
! AGGGTGCGTGATGTTGGCTG+TGG + chr8_3:51775064-51775083 Msa1294080:intron 60.0%
! GTGCGTGATGTTGGCTGTGG+AGG + chr8_3:51775067-51775086 Msa1294080:intron 60.0%
CCGCATGACACCCTCTACCA+TGG - chr8_3:51775214-51775233 None:intergenic 60.0%
!! TGGTAGAGGGTGTCATGCGG+CGG + chr8_3:51775214-51775233 Msa1294080:intron 60.0%
!! GCAGTGGGGAGGGTATTTGG+CGG + chr8_3:51775236-51775255 Msa1294080:intron 60.0%
!! CAGTGGGGAGGGTATTTGGC+GGG + chr8_3:51775237-51775256 Msa1294080:intron 60.0%
!! AGTGGGGAGGGTATTTGGCG+GGG + chr8_3:51775238-51775257 Msa1294080:intron 60.0%
TGACGGTGGAGATTGTCGGG+TGG + chr8_3:51775338-51775357 Msa1294080:intron 60.0%
! GTCTAGGGGCTCGGTTGACG+CGG + chr8_3:51770874-51770893 Msa1294080:intron 65.0%
TCACGCCCTCTCCTAGAGCG+CGG + chr8_3:51774713-51774732 Msa1294080:intron 65.0%
!! TACCAGAGAGTGCTGGGGGG+AGG + chr8_3:51775044-51775063 Msa1294080:intron 65.0%
!! ACCAGAGAGTGCTGGGGGGA+GGG + chr8_3:51775045-51775064 Msa1294080:intron 65.0%
!! GCGGCAGTGGGGAGGGTATT+TGG + chr8_3:51775233-51775252 Msa1294080:intron 65.0%
!! GTGGGGAGGGTATTTGGCGG+GGG + chr8_3:51775239-51775258 Msa1294080:intron 65.0%
ATTTGGCGGGGGCAGCCAAG+AGG + chr8_3:51775250-51775269 Msa1294080:intron 65.0%
GGGGGCAGCCAAGAGGTTGT+TGG + chr8_3:51775257-51775276 Msa1294080:intron 65.0%
ACCCTCCCCCCAGCACTCTC+TGG - chr8_3:51775049-51775068 None:intergenic 70.0%
! GGGGGGAGGGTGCGTGATGT+TGG + chr8_3:51775058-51775077 Msa1294080:intron 70.0%
! AGGGTGTCATGCGGCGGCAG+TGG + chr8_3:51775220-51775239 Msa1294080:intron 70.0%
! GGGTGTCATGCGGCGGCAGT+GGG + chr8_3:51775221-51775240 Msa1294080:intron 70.0%
! GGTGTCATGCGGCGGCAGTG+GGG + chr8_3:51775222-51775241 Msa1294080:intron 70.0%
TCATGCGGCGGCAGTGGGGA+GGG + chr8_3:51775226-51775245 Msa1294080:intron 70.0%
GTCATGCGGCGGCAGTGGGG+AGG + chr8_3:51775225-51775244 Msa1294080:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 51769658 51777959 51769658 ID=Msa1294080;Name=Msa1294080
chr8_3 mRNA 51769658 51777959 51769658 ID=Msa1294080-mRNA-1;Parent=Msa1294080;Name=Msa1294080-mRNA-1;_AED=0.04;_eAED=0.04;_QI=172|1|1|1|0.66|0.85|7|471|173
chr8_3 exon 51769658 51769934 51769658 ID=Msa1294080-mRNA-1:exon:14504;Parent=Msa1294080-mRNA-1
chr8_3 exon 51770620 51770699 51770620 ID=Msa1294080-mRNA-1:exon:14505;Parent=Msa1294080-mRNA-1
chr8_3 exon 51772075 51772145 51772075 ID=Msa1294080-mRNA-1:exon:14506;Parent=Msa1294080-mRNA-1
chr8_3 exon 51773166 51773224 51773166 ID=Msa1294080-mRNA-1:exon:14507;Parent=Msa1294080-mRNA-1
chr8_3 exon 51773311 51773392 51773311 ID=Msa1294080-mRNA-1:exon:14508;Parent=Msa1294080-mRNA-1
chr8_3 exon 51773703 51773752 51773703 ID=Msa1294080-mRNA-1:exon:14509;Parent=Msa1294080-mRNA-1
chr8_3 exon 51777414 51777959 51777414 ID=Msa1294080-mRNA-1:exon:14510;Parent=Msa1294080-mRNA-1
chr8_3 five_prime_UTR 51769658 51769829 51769658 ID=Msa1294080-mRNA-1:five_prime_utr;Parent=Msa1294080-mRNA-1
chr8_3 CDS 51769830 51769934 51769830 ID=Msa1294080-mRNA-1:cds;Parent=Msa1294080-mRNA-1
chr8_3 CDS 51770620 51770699 51770620 ID=Msa1294080-mRNA-1:cds;Parent=Msa1294080-mRNA-1
chr8_3 CDS 51772075 51772145 51772075 ID=Msa1294080-mRNA-1:cds;Parent=Msa1294080-mRNA-1
chr8_3 CDS 51773166 51773224 51773166 ID=Msa1294080-mRNA-1:cds;Parent=Msa1294080-mRNA-1
chr8_3 CDS 51773311 51773392 51773311 ID=Msa1294080-mRNA-1:cds;Parent=Msa1294080-mRNA-1
chr8_3 CDS 51773703 51773752 51773703 ID=Msa1294080-mRNA-1:cds;Parent=Msa1294080-mRNA-1
chr8_3 CDS 51777414 51777488 51777414 ID=Msa1294080-mRNA-1:cds;Parent=Msa1294080-mRNA-1
chr8_3 three_prime_UTR 51777489 51777959 51777489 ID=Msa1294080-mRNA-1:three_prime_utr;Parent=Msa1294080-mRNA-1
Gene Sequence

>Msa1294080

ATGATGGGAGAAGAAGAACTTGAAAGATCATTCGCAGCTCCTCTCATATTCTTAATCGTTCTCGCTTTTCAATTTGCTTCTTATTGGATTGATAAATTCAAACAGGGTGGATCTGAGAAGGAAAAAGAAATTCAGTTGCGTGCAGAAATAAAACAACTTTTGAAGGAGGCAAGCTCCCTTTCGCAGCCATCCACCTTTGCACAAGCAGCAAAACTCAGAAGACAGGCGGCTGCAAAGGAGAAGGAACTTGCAAAGTGTCATAATTTACATGATGAGGACACAGCTTTGTATTCGAAAGCTCTATTCATCACAAAGGTTTTAACACATTTAATTTTGCTTATCTGGTTTTGGAGTACTCCTGTGGCTAGCATATCTCAACAACTTGTGCAACCATTTGGGAGATTATTATCTTGGAAGACTGGAGGAGTTCAAAATAACAATATTATGGTTGGAATAATACCTTGGCTAGCAATATCTTCCAGGGTTAGCAAATTTATTTGTAAACTCACGTATGGCAAATAG
Protein sequence

>Msa1294080

MMGEEELERSFAAPLIFLIVLAFQFASYWIDKFKQGGSEKEKEIQLRAEIKQLLKEASSLSQPSTFAQAAKLRRQAAAKEKELAKCHNLHDEDTALYSKALFITKVLTHLILLIWFWSTPVASISQQLVQPFGRLLSWKTGGVQNNNIMVGIIPWLAISSRVSKFICKLTYGK*