Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0413730 | XP_003599302.1 | 89.542 | 153 | 14 | 1 | 1 | 153 | 1 | 151 | 1.65e-80 | 244 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0413730 | G7J0N5 | 89.542 | 153 | 14 | 1 | 1 | 153 | 1 | 151 | 7.89e-81 | 244 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004540 | Msa0413730 | 0.829139 | 6.085066e-55 | -8.615850e-47 |
| Msa0006290 | Msa0413730 | 0.813034 | 3.139932e-51 | -8.615850e-47 |
| Msa0006880 | Msa0413730 | 0.826451 | 2.693956e-54 | -8.615850e-47 |
| Msa0007850 | Msa0413730 | 0.816573 | 5.158737e-52 | -8.615850e-47 |
| Msa0008090 | Msa0413730 | 0.802253 | 6.124339e-49 | -8.615850e-47 |
| Msa0010490 | Msa0413730 | 0.819717 | 1.003018e-52 | -8.615850e-47 |
| Msa0010500 | Msa0413730 | 0.808017 | 3.807529e-50 | -8.615850e-47 |
| Msa0010770 | Msa0413730 | 0.800579 | 1.348835e-48 | -8.615850e-47 |
| Msa0029260 | Msa0413730 | 0.826547 | 2.555497e-54 | -8.615850e-47 |
| Msa0030300 | Msa0413730 | 0.847658 | 1.006151e-59 | -8.615850e-47 |
| Msa0033880 | Msa0413730 | 0.857471 | 1.595660e-62 | -8.615850e-47 |
| Msa0037160 | Msa0413730 | 0.835950 | 1.245149e-56 | -8.615850e-47 |
| Msa0038000 | Msa0413730 | 0.805397 | 1.361336e-49 | -8.615850e-47 |
| Msa0038440 | Msa0413730 | 0.804970 | 1.672564e-49 | -8.615850e-47 |
| Msa0039250 | Msa0413730 | 0.805515 | 1.286439e-49 | -8.615850e-47 |
| Msa0041690 | Msa0413730 | 0.807806 | 4.221373e-50 | -8.615850e-47 |
| Msa0043650 | Msa0413730 | 0.800901 | 1.159487e-48 | -8.615850e-47 |
| Msa0045490 | Msa0413730 | 0.804575 | 2.022446e-49 | -8.615850e-47 |
| Msa0047160 | Msa0413730 | 0.801894 | 7.259138e-49 | -8.615850e-47 |
| Msa0048180 | Msa0413730 | 0.811493 | 6.812596e-51 | -8.615850e-47 |
| Msa0054930 | Msa0413730 | 0.805302 | 1.425255e-49 | -8.615850e-47 |
| Msa0055070 | Msa0413730 | 0.801604 | 8.324829e-49 | -8.615850e-47 |
| Msa0055100 | Msa0413730 | 0.812243 | 4.676622e-51 | -8.615850e-47 |
| Msa0055150 | Msa0413730 | 0.807913 | 4.006955e-50 | -8.615850e-47 |
| Msa0057590 | Msa0413730 | 0.800445 | 1.436660e-48 | -8.615850e-47 |
| Msa0077900 | Msa0413730 | 0.840742 | 7.240123e-58 | -8.615850e-47 |
| Msa0081650 | Msa0413730 | 0.822372 | 2.454099e-53 | -8.615850e-47 |
| Msa0087800 | Msa0413730 | 0.809947 | 1.471144e-50 | -8.615850e-47 |
| Msa0090520 | Msa0413730 | 0.820393 | 7.022340e-53 | -8.615850e-47 |
| Msa0093010 | Msa0413730 | 0.802227 | 6.199768e-49 | -8.615850e-47 |
| Msa0096580 | Msa0413730 | 0.801495 | 8.766937e-49 | -8.615850e-47 |
| Msa0097950 | Msa0413730 | 0.855431 | 6.339655e-62 | -8.615850e-47 |
| Msa0098740 | Msa0413730 | 0.803100 | 4.095883e-49 | -8.615850e-47 |
| Msa0100300 | Msa0413730 | 0.806854 | 6.718805e-50 | -8.615850e-47 |
| Msa0100800 | Msa0413730 | 0.806746 | 7.083757e-50 | -8.615850e-47 |
| Msa0105520 | Msa0413730 | 0.830379 | 3.035891e-55 | -8.615850e-47 |
| Msa0108870 | Msa0413730 | 0.801353 | 9.370383e-49 | -8.615850e-47 |
| Msa0115370 | Msa0413730 | 0.808279 | 3.348695e-50 | -8.615850e-47 |
| Msa0123510 | Msa0413730 | 0.829432 | 5.166184e-55 | -8.615850e-47 |
| Msa0126360 | Msa0413730 | 0.808186 | 3.504950e-50 | -8.615850e-47 |
| Msa0126880 | Msa0413730 | 0.812246 | 4.669225e-51 | -8.615850e-47 |
| Msa0127040 | Msa0413730 | 0.823854 | 1.107116e-53 | -8.615850e-47 |
| Msa0127850 | Msa0413730 | 0.863814 | 1.902716e-64 | -8.615850e-47 |
| Msa0128650 | Msa0413730 | 0.818528 | 1.869928e-52 | -8.615850e-47 |
| Msa0131450 | Msa0413730 | 0.804694 | 1.910564e-49 | -8.615850e-47 |
| Msa0136120 | Msa0413730 | 0.832177 | 1.096893e-55 | -8.615850e-47 |
| Msa0137990 | Msa0413730 | 0.819166 | 1.339797e-52 | -8.615850e-47 |
| Msa0142500 | Msa0413730 | 0.802560 | 5.293233e-49 | -8.615850e-47 |
| Msa0145110 | Msa0413730 | 0.804118 | 2.517853e-49 | -8.615850e-47 |
| Msa0146080 | Msa0413730 | 0.817753 | 2.800532e-52 | -8.615850e-47 |
| Msa0147980 | Msa0413730 | 0.811132 | 8.156789e-51 | -8.615850e-47 |
| Msa0165440 | Msa0413730 | 0.822292 | 2.560476e-53 | -8.615850e-47 |
| Msa0166750 | Msa0413730 | 0.812769 | 3.588801e-51 | -8.615850e-47 |
| Msa0169300 | Msa0413730 | 0.826370 | 2.816205e-54 | -8.615850e-47 |
| Msa0174000 | Msa0413730 | 0.850882 | 1.273638e-60 | -8.615850e-47 |
| Msa0174690 | Msa0413730 | 0.805058 | 1.603499e-49 | -8.615850e-47 |
| Msa0177210 | Msa0413730 | 0.843873 | 1.071586e-58 | -8.615850e-47 |
| Msa0177230 | Msa0413730 | 0.802852 | 4.609330e-49 | -8.615850e-47 |
| Msa0177270 | Msa0413730 | 0.810909 | 9.119524e-51 | -8.615850e-47 |
| Msa0178510 | Msa0413730 | 0.801175 | 1.019165e-48 | -8.615850e-47 |
| Msa0183900 | Msa0413730 | 0.816195 | 6.266685e-52 | -8.615850e-47 |
| Msa0185510 | Msa0413730 | 0.808848 | 2.530890e-50 | -8.615850e-47 |
| Msa0189300 | Msa0413730 | 0.812362 | 4.403808e-51 | -8.615850e-47 |
| Msa0193540 | Msa0413730 | 0.801585 | 8.401950e-49 | -8.615850e-47 |
| Msa0198520 | Msa0413730 | 0.822681 | 2.079410e-53 | -8.615850e-47 |
| Msa0198530 | Msa0413730 | 0.842211 | 2.970593e-58 | -8.615850e-47 |
| Msa0202110 | Msa0413730 | 0.801535 | 8.600153e-49 | -8.615850e-47 |
| Msa0202410 | Msa0413730 | 0.809864 | 1.532558e-50 | -8.615850e-47 |
| Msa0205010 | Msa0413730 | 0.810982 | 8.793196e-51 | -8.615850e-47 |
| Msa0211650 | Msa0413730 | 0.806091 | 9.734350e-50 | -8.615850e-47 |
| Msa0227400 | Msa0413730 | 0.804100 | 2.540758e-49 | -8.615850e-47 |
| Msa0229170 | Msa0413730 | 0.807769 | 4.298768e-50 | -8.615850e-47 |
| Msa0231660 | Msa0413730 | 0.829654 | 4.560495e-55 | -8.615850e-47 |
| Msa0238030 | Msa0413730 | 0.803686 | 3.096441e-49 | -8.615850e-47 |
| Msa0365860 | Msa0413730 | 0.810096 | 1.365972e-50 | -8.615850e-47 |
| Msa0376280 | Msa0413730 | 0.807672 | 4.509214e-50 | -8.615850e-47 |
| Msa0378970 | Msa0413730 | 0.816180 | 6.314883e-52 | -8.615850e-47 |
| Msa0381000 | Msa0413730 | 0.816320 | 5.878085e-52 | -8.615850e-47 |
| Msa0381080 | Msa0413730 | 0.814285 | 1.665684e-51 | -8.615850e-47 |
| Msa0384670 | Msa0413730 | 0.821921 | 3.121377e-53 | -8.615850e-47 |
| Msa0384880 | Msa0413730 | 0.800653 | 1.302566e-48 | -8.615850e-47 |
| Msa0397820 | Msa0413730 | 0.807184 | 5.721564e-50 | -8.615850e-47 |
| Msa0405650 | Msa0413730 | 0.811831 | 5.749865e-51 | -8.615850e-47 |
| Msa0413730 | Msa0419520 | 0.830857 | 2.319320e-55 | -8.615850e-47 |
| Msa0413730 | Msa0419720 | 0.816833 | 4.511373e-52 | -8.615850e-47 |
| Msa0413730 | Msa0434570 | 0.816355 | 5.772230e-52 | -8.615850e-47 |
| Msa0413730 | Msa0434770 | 0.815381 | 9.516184e-52 | -8.615850e-47 |
| Msa0413730 | Msa0436200 | 0.805982 | 1.026164e-49 | -8.615850e-47 |
| Msa0413730 | Msa0437400 | 0.805969 | 1.032759e-49 | -8.615850e-47 |
| Msa0413730 | Msa0439890 | 0.839308 | 1.712646e-57 | -8.615850e-47 |
| Msa0413730 | Msa0443430 | 0.837478 | 5.077180e-57 | -8.615850e-47 |
| Msa0413730 | Msa0444080 | 0.811618 | 6.399261e-51 | -8.615850e-47 |
| Msa0413730 | Msa0458780 | 0.850112 | 2.096028e-60 | -8.615850e-47 |
| Msa0413730 | Msa0461590 | 0.810314 | 1.226038e-50 | -8.615850e-47 |
| Msa0413730 | Msa0465550 | 0.821558 | 3.788133e-53 | -8.615850e-47 |
| Msa0413730 | Msa0474700 | 0.852952 | 3.292160e-61 | -8.615850e-47 |
| Msa0413730 | Msa0478580 | 0.835985 | 1.219752e-56 | -8.615850e-47 |
| Msa0413730 | Msa0482940 | 0.802167 | 6.378088e-49 | -8.615850e-47 |
| Msa0413730 | Msa0484840 | 0.800801 | 1.215400e-48 | -8.615850e-47 |
| Msa0413730 | Msa0489660 | 0.816734 | 4.746877e-52 | -8.615850e-47 |
| Msa0413730 | Msa0505380 | 0.977230 | 2.288872e-143 | -8.615850e-47 |
| Msa0413730 | Msa0510930 | 0.802037 | 6.785586e-49 | -8.615850e-47 |
| Msa0413730 | Msa0511490 | 0.831520 | 1.593277e-55 | -8.615850e-47 |
| Msa0413730 | Msa0511770 | 0.833554 | 4.989125e-56 | -8.615850e-47 |
| Msa0413730 | Msa0513260 | 0.802091 | 6.612017e-49 | -8.615850e-47 |
| Msa0413730 | Msa0514610 | 0.811634 | 6.348051e-51 | -8.615850e-47 |
| Msa0413730 | Msa0518030 | 0.806819 | 6.836449e-50 | -8.615850e-47 |
| Msa0413730 | Msa0518440 | 0.821065 | 4.922853e-53 | -8.615850e-47 |
| Msa0413730 | Msa0524590 | 0.804541 | 2.055763e-49 | -8.615850e-47 |
| Msa0413730 | Msa0531250 | 0.807746 | 4.348180e-50 | -8.615850e-47 |
| Msa0413730 | Msa0532980 | 0.804343 | 2.260513e-49 | -8.615850e-47 |
| Msa0413730 | Msa0538800 | 0.803014 | 4.266630e-49 | -8.615850e-47 |
| Msa0413730 | Msa0546570 | 0.843008 | 1.824654e-58 | -8.615850e-47 |
| Msa0413730 | Msa0547990 | 0.839099 | 1.939730e-57 | -8.615850e-47 |
| Msa0413730 | Msa0550540 | 0.821262 | 4.432269e-53 | -8.615850e-47 |
| Msa0413730 | Msa0550570 | 0.836993 | 6.755689e-57 | -8.615850e-47 |
| Msa0413730 | Msa0554290 | 0.807014 | 6.215613e-50 | -8.615850e-47 |
| Msa0413730 | Msa0556790 | 0.812462 | 4.188469e-51 | -8.615850e-47 |
| Msa0413730 | Msa0560500 | 0.806458 | 8.147842e-50 | -8.615850e-47 |
| Msa0413730 | Msa0562690 | 0.803330 | 3.669698e-49 | -8.615850e-47 |
| Msa0413730 | Msa0581110 | 0.807147 | 5.826331e-50 | -8.615850e-47 |
| Msa0413730 | Msa0581280 | 0.809113 | 2.222004e-50 | -8.615850e-47 |
| Msa0413730 | Msa0584550 | 0.806763 | 7.022672e-50 | -8.615850e-47 |
| Msa0413730 | Msa0586850 | 0.825323 | 4.989879e-54 | -8.615850e-47 |
| Msa0413730 | Msa0588090 | 0.806984 | 6.308551e-50 | -8.615850e-47 |
| Msa0413730 | Msa0593700 | 0.801579 | 8.424472e-49 | -8.615850e-47 |
| Msa0413730 | Msa0600080 | 0.814412 | 1.560820e-51 | -8.615850e-47 |
| Msa0413730 | Msa0600610 | 0.808350 | 3.233832e-50 | -8.615850e-47 |
| Msa0413730 | Msa0602370 | 0.821531 | 3.841828e-53 | -8.615850e-47 |
| Msa0413730 | Msa0603670 | 0.807144 | 5.834790e-50 | -8.615850e-47 |
| Msa0413730 | Msa0606810 | 0.833978 | 3.909153e-56 | -8.615850e-47 |
| Msa0413730 | Msa0610090 | 0.802449 | 5.580887e-49 | -8.615850e-47 |
| Msa0413730 | Msa0610390 | 0.808243 | 3.408719e-50 | -8.615850e-47 |
| Msa0413730 | Msa0614510 | 0.812893 | 3.371077e-51 | -8.615850e-47 |
| Msa0413730 | Msa0618930 | 0.822292 | 2.560984e-53 | -8.615850e-47 |
| Msa0413730 | Msa0618950 | 0.817409 | 3.347938e-52 | -8.615850e-47 |
| Msa0413730 | Msa0620330 | 0.846276 | 2.404967e-59 | -8.615850e-47 |
| Msa0413730 | Msa0626680 | 0.804482 | 2.115064e-49 | -8.615850e-47 |
| Msa0413730 | Msa0628420 | 0.810537 | 1.097380e-50 | -8.615850e-47 |
| Msa0413730 | Msa0642970 | 0.811905 | 5.540526e-51 | -8.615850e-47 |
| Msa0413730 | Msa0643320 | 0.819845 | 9.377214e-53 | -8.615850e-47 |
| Msa0413730 | Msa0644030 | 0.844081 | 9.429075e-59 | -8.615850e-47 |
| Msa0413730 | Msa0647950 | 0.801414 | 9.106897e-49 | -8.615850e-47 |
| Msa0413730 | Msa0652300 | 0.818052 | 2.396917e-52 | -8.615850e-47 |
| Msa0413730 | Msa0658480 | 0.816619 | 5.036743e-52 | -8.615850e-47 |
| Msa0413730 | Msa0662630 | 0.824440 | 8.061385e-54 | -8.615850e-47 |
| Msa0413730 | Msa0666230 | 0.815945 | 7.128296e-52 | -8.615850e-47 |
| Msa0413730 | Msa0667790 | 0.800215 | 1.600002e-48 | -8.615850e-47 |
| Msa0413730 | Msa0673270 | 0.827272 | 1.714837e-54 | -8.615850e-47 |
| Msa0413730 | Msa0679100 | 0.807768 | 4.301366e-50 | -8.615850e-47 |
| Msa0413730 | Msa0682090 | 0.821018 | 5.046067e-53 | -8.615850e-47 |
| Msa0413730 | Msa0682140 | 0.817476 | 3.232923e-52 | -8.615850e-47 |
| Msa0413730 | Msa0683140 | 0.813594 | 2.365713e-51 | -8.615850e-47 |
| Msa0413730 | Msa0683600 | 0.828718 | 7.691658e-55 | -8.615850e-47 |
| Msa0413730 | Msa0686080 | 0.834250 | 3.340437e-56 | -8.615850e-47 |
| Msa0413730 | Msa0689500 | 0.805945 | 1.044800e-49 | -8.615850e-47 |
| Msa0413730 | Msa0691290 | 0.814561 | 1.446810e-51 | -8.615850e-47 |
| Msa0413730 | Msa0694840 | 0.825539 | 4.435170e-54 | -8.615850e-47 |
| Msa0413730 | Msa0697720 | 0.811185 | 7.944103e-51 | -8.615850e-47 |
| Msa0413730 | Msa0703910 | 0.804883 | 1.744319e-49 | -8.615850e-47 |
| Msa0413730 | Msa0705390 | 0.802647 | 5.080678e-49 | -8.615850e-47 |
| Msa0413730 | Msa0706390 | 0.806631 | 7.490076e-50 | -8.615850e-47 |
| Msa0413730 | Msa0709160 | 0.824100 | 9.693498e-54 | -8.615850e-47 |
| Msa0413730 | Msa0712560 | 0.804447 | 2.151179e-49 | -8.615850e-47 |
| Msa0413730 | Msa0716960 | 0.817014 | 4.106409e-52 | -8.615850e-47 |
| Msa0413730 | Msa0717010 | 0.808600 | 2.860054e-50 | -8.615850e-47 |
| Msa0413730 | Msa0721280 | 0.823136 | 1.629348e-53 | -8.615850e-47 |
| Msa0413730 | Msa0726080 | 0.827336 | 1.655459e-54 | -8.615850e-47 |
| Msa0413730 | Msa0744090 | 0.818725 | 1.687455e-52 | -8.615850e-47 |
| Msa0413730 | Msa0744100 | 0.847209 | 1.336250e-59 | -8.615850e-47 |
| Msa0413730 | Msa0745200 | 0.814980 | 1.168442e-51 | -8.615850e-47 |
| Msa0413730 | Msa0750250 | 0.805220 | 1.483246e-49 | -8.615850e-47 |
| Msa0413730 | Msa0756930 | 0.844953 | 5.493684e-59 | -8.615850e-47 |
| Msa0413730 | Msa0774750 | 0.819792 | 9.643480e-53 | -8.615850e-47 |
| Msa0413730 | Msa0780880 | 0.819693 | 1.015972e-52 | -8.615850e-47 |
| Msa0413730 | Msa0781270 | 0.833182 | 6.176015e-56 | -8.615850e-47 |
| Msa0413730 | Msa0788120 | 0.812794 | 3.543497e-51 | -8.615850e-47 |
| Msa0413730 | Msa0800370 | 0.810796 | 9.643676e-51 | -8.615850e-47 |
| Msa0413730 | Msa0812290 | 0.809144 | 2.187274e-50 | -8.615850e-47 |
| Msa0413730 | Msa0819060 | 0.814548 | 1.456571e-51 | -8.615850e-47 |
| Msa0413730 | Msa0820250 | 0.817536 | 3.134691e-52 | -8.615850e-47 |
| Msa0413730 | Msa0825270 | 0.849513 | 3.082479e-60 | -8.615850e-47 |
| Msa0413730 | Msa0825280 | 0.819883 | 9.192474e-53 | -8.615850e-47 |
| Msa0413730 | Msa0826500 | 0.814375 | 1.590525e-51 | -8.615850e-47 |
| Msa0413730 | Msa0827280 | 0.822819 | 1.931415e-53 | -8.615850e-47 |
| Msa0413730 | Msa0830390 | 0.805648 | 1.206167e-49 | -8.615850e-47 |
| Msa0413730 | Msa0833190 | -0.819527 | 1.108474e-52 | -8.615850e-47 |
| Msa0413730 | Msa0836500 | 0.833431 | 5.353329e-56 | -8.615850e-47 |
| Msa0413730 | Msa0844230 | 0.806927 | 6.485429e-50 | -8.615850e-47 |
| Msa0413730 | Msa0846230 | 0.828487 | 8.750633e-55 | -8.615850e-47 |
| Msa0413730 | Msa0851470 | 0.821300 | 4.344182e-53 | -8.615850e-47 |
| Msa0413730 | Msa0859180 | 0.818041 | 2.410388e-52 | -8.615850e-47 |
| Msa0413730 | Msa0864420 | 0.827336 | 1.654884e-54 | -8.615850e-47 |
| Msa0413730 | Msa0865030 | 0.803394 | 3.559997e-49 | -8.615850e-47 |
| Msa0413730 | Msa0865570 | 0.816574 | 5.155385e-52 | -8.615850e-47 |
| Msa0413730 | Msa0879850 | 0.812784 | 3.561550e-51 | -8.615850e-47 |
| Msa0413730 | Msa0881580 | 0.801413 | 9.111496e-49 | -8.615850e-47 |
| Msa0413730 | Msa0899350 | 0.814914 | 1.208443e-51 | -8.615850e-47 |
| Msa0413730 | Msa0901320 | 0.806762 | 7.027676e-50 | -8.615850e-47 |
| Msa0413730 | Msa0901450 | 0.821751 | 3.418207e-53 | -8.615850e-47 |
| Msa0413730 | Msa0905750 | 0.801682 | 8.025433e-49 | -8.615850e-47 |
| Msa0413730 | Msa0918390 | 0.818595 | 1.805769e-52 | -8.615850e-47 |
| Msa0413730 | Msa0944200 | 0.812618 | 3.872893e-51 | -8.615850e-47 |
| Msa0413730 | Msa0959910 | 0.814682 | 1.360818e-51 | -8.615850e-47 |
| Msa0413730 | Msa0965020 | 0.831519 | 1.594534e-55 | -8.615850e-47 |
| Msa0413730 | Msa0970030 | 0.812303 | 4.536623e-51 | -8.615850e-47 |
| Msa0413730 | Msa0970600 | 0.808850 | 2.529320e-50 | -8.615850e-47 |
| Msa0413730 | Msa0980020 | 0.818690 | 1.718858e-52 | -8.615850e-47 |
| Msa0413730 | Msa0981430 | 0.854394 | 1.267687e-61 | -8.615850e-47 |
| Msa0413730 | Msa0990580 | 0.826717 | 2.327633e-54 | -8.615850e-47 |
| Msa0413730 | Msa0990590 | 0.817374 | 3.408903e-52 | -8.615850e-47 |
| Msa0413730 | Msa1001350 | 0.828465 | 8.853859e-55 | -8.615850e-47 |
| Msa0413730 | Msa1006840 | 0.812020 | 5.230826e-51 | -8.615850e-47 |
| Msa0413730 | Msa1025940 | 0.822685 | 2.075196e-53 | -8.615850e-47 |
| Msa0413730 | Msa1027250 | 0.826609 | 2.470305e-54 | -8.615850e-47 |
| Msa0413730 | Msa1027300 | 0.818876 | 1.559169e-52 | -8.615850e-47 |
| Msa0413730 | Msa1029970 | 0.815679 | 8.170883e-52 | -8.615850e-47 |
| Msa0413730 | Msa1031770 | 0.832193 | 1.087097e-55 | -8.615850e-47 |
| Msa0413730 | Msa1041520 | 0.813035 | 3.137942e-51 | -8.615850e-47 |
| Msa0413730 | Msa1048750 | -0.801934 | 7.124324e-49 | -8.615850e-47 |
| Msa0413730 | Msa1051330 | 0.818681 | 1.726250e-52 | -8.615850e-47 |
| Msa0413730 | Msa1063420 | 0.822994 | 1.758862e-53 | -8.615850e-47 |
| Msa0413730 | Msa1070390 | 0.815148 | 1.072182e-51 | -8.615850e-47 |
| Msa0413730 | Msa1070840 | 0.813307 | 2.735104e-51 | -8.615850e-47 |
| Msa0413730 | Msa1080640 | 0.810810 | 9.580322e-51 | -8.615850e-47 |
| Msa0413730 | Msa1083880 | 0.806836 | 6.778213e-50 | -8.615850e-47 |
| Msa0413730 | Msa1089320 | 0.825100 | 5.633759e-54 | -8.615850e-47 |
| Msa0413730 | Msa1093330 | 0.807914 | 4.004503e-50 | -8.615850e-47 |
| Msa0413730 | Msa1097820 | 0.807398 | 5.155415e-50 | -8.615850e-47 |
| Msa0413730 | Msa1100530 | -0.803364 | 3.611722e-49 | -8.615850e-47 |
| Msa0413730 | Msa1103660 | -0.817115 | 3.897843e-52 | -8.615850e-47 |
| Msa0413730 | Msa1113230 | -0.802435 | 5.617770e-49 | -8.615850e-47 |
| Msa0413730 | Msa1125470 | 0.807302 | 5.402025e-50 | -8.615850e-47 |
| Msa0413730 | Msa1125550 | 0.804443 | 2.154854e-49 | -8.615850e-47 |
| Msa0413730 | Msa1126450 | 0.815068 | 1.117133e-51 | -8.615850e-47 |
| Msa0413730 | Msa1126830 | 0.807086 | 6.002509e-50 | -8.615850e-47 |
| Msa0413730 | Msa1128330 | 0.815351 | 9.667803e-52 | -8.615850e-47 |
| Msa0413730 | Msa1130530 | 0.817639 | 2.970437e-52 | -8.615850e-47 |
| Msa0413730 | Msa1133400 | 0.828444 | 8.958383e-55 | -8.615850e-47 |
| Msa0413730 | Msa1152520 | 0.813641 | 2.309955e-51 | -8.615850e-47 |
| Msa0413730 | Msa1158230 | 0.845558 | 3.767983e-59 | -8.615850e-47 |
| Msa0413730 | Msa1158770 | 0.810632 | 1.046615e-50 | -8.615850e-47 |
| Msa0413730 | Msa1163870 | 0.806819 | 6.836449e-50 | -8.615850e-47 |
| Msa0413730 | Msa1165780 | 0.816083 | 6.638068e-52 | -8.615850e-47 |
| Msa0413730 | Msa1171830 | 0.822194 | 2.699422e-53 | -8.615850e-47 |
| Msa0413730 | Msa1176980 | 0.820194 | 7.802028e-53 | -8.615850e-47 |
| Msa0413730 | Msa1178060 | 0.810866 | 9.316353e-51 | -8.615850e-47 |
| Msa0413730 | Msa1179950 | 0.824536 | 7.656121e-54 | -8.615850e-47 |
| Msa0413730 | Msa1179980 | 0.832887 | 7.312576e-56 | -8.615850e-47 |
| Msa0413730 | Msa1181170 | -0.804663 | 1.939122e-49 | -8.615850e-47 |
| Msa0413730 | Msa1188600 | -0.817665 | 2.931821e-52 | -8.615850e-47 |
| Msa0413730 | Msa1201830 | 0.807339 | 5.306139e-50 | -8.615850e-47 |
| Msa0413730 | Msa1202150 | 0.819262 | 1.273541e-52 | -8.615850e-47 |
| Msa0413730 | Msa1202580 | 0.821772 | 3.379599e-53 | -8.615850e-47 |
| Msa0413730 | Msa1206310 | 0.808975 | 2.378108e-50 | -8.615850e-47 |
| Msa0413730 | Msa1206360 | 0.800808 | 1.211626e-48 | -8.615850e-47 |
| Msa0413730 | Msa1206650 | 0.829690 | 4.469037e-55 | -8.615850e-47 |
| Msa0413730 | Msa1207730 | 0.809060 | 2.280261e-50 | -8.615850e-47 |
| Msa0413730 | Msa1209760 | 0.801188 | 1.013252e-48 | -8.615850e-47 |
| Msa0413730 | Msa1211830 | 0.803450 | 3.466018e-49 | -8.615850e-47 |
| Msa0413730 | Msa1216720 | 0.815333 | 9.756470e-52 | -8.615850e-47 |
| Msa0413730 | Msa1226610 | 0.929849 | 3.844735e-93 | -8.615850e-47 |
| Msa0413730 | Msa1227460 | 0.803616 | 3.202395e-49 | -8.615850e-47 |
| Msa0413730 | Msa1233850 | 0.803486 | 3.407122e-49 | -8.615850e-47 |
| Msa0413730 | Msa1257070 | 0.811448 | 6.966941e-51 | -8.615850e-47 |
| Msa0413730 | Msa1264210 | 0.801243 | 9.873147e-49 | -8.615850e-47 |
| Msa0413730 | Msa1265630 | 0.804264 | 2.348747e-49 | -8.615850e-47 |
| Msa0413730 | Msa1270420 | 0.801054 | 1.079227e-48 | -8.615850e-47 |
| Msa0413730 | Msa1270620 | 0.831798 | 1.360989e-55 | -8.615850e-47 |
| Msa0413730 | Msa1270660 | 0.806466 | 8.114534e-50 | -8.615850e-47 |
| Msa0413730 | Msa1270690 | 0.831531 | 1.583806e-55 | -8.615850e-47 |
| Msa0413730 | Msa1278900 | 0.822128 | 2.795538e-53 | -8.615850e-47 |
| Msa0413730 | Msa1280620 | 0.822692 | 2.067303e-53 | -8.615850e-47 |
| Msa0413730 | Msa1294080 | 0.818316 | 2.089027e-52 | -8.615850e-47 |
| Msa0413730 | Msa1294840 | 0.804067 | 2.580904e-49 | -8.615850e-47 |
| Msa0413730 | Msa1294960 | 0.813711 | 2.229385e-51 | -8.615850e-47 |
| Msa0413730 | Msa1295110 | 0.801169 | 1.021938e-48 | -8.615850e-47 |
| Msa0413730 | Msa1304860 | 0.801297 | 9.621377e-49 | -8.615850e-47 |
| Msa0413730 | Msa1306990 | 0.827453 | 1.551759e-54 | -8.615850e-47 |
| Msa0413730 | Msa1307180 | 0.818109 | 2.326432e-52 | -8.615850e-47 |
| Msa0413730 | Msa1315750 | 0.808100 | 3.655898e-50 | -8.615850e-47 |
| Msa0413730 | Msa1316360 | 0.812439 | 4.236537e-51 | -8.615850e-47 |
| Msa0413730 | Msa1320820 | 0.806548 | 7.798982e-50 | -8.615850e-47 |
| Msa0413730 | Msa1331250 | 0.808502 | 3.001365e-50 | -8.615850e-47 |
| Msa0413730 | Msa1331350 | 0.808055 | 3.736951e-50 | -8.615850e-47 |
| Msa0413730 | Msa1336560 | 0.809637 | 1.715215e-50 | -8.615850e-47 |
| Msa0413730 | Msa1341490 | 0.810833 | 9.469696e-51 | -8.615850e-47 |
| Msa0413730 | Msa1344310 | 0.804373 | 2.228630e-49 | -8.615850e-47 |
| Msa0413730 | Msa1348650 | -0.811639 | 6.332052e-51 | -8.615850e-47 |
| Msa0413730 | Msa1351540 | 0.814460 | 1.523427e-51 | -8.615850e-47 |
| Msa0413730 | Msa1355700 | 0.829826 | 4.141839e-55 | -8.615850e-47 |
| Msa0413730 | Msa1356440 | 0.809789 | 1.590411e-50 | -8.615850e-47 |
| Msa0413730 | Msa1356610 | 0.800080 | 1.704776e-48 | -8.615850e-47 |
| Msa0413730 | Msa1357190 | 0.800961 | 1.127333e-48 | -8.615850e-47 |
| Msa0413730 | Msa1357890 | 0.824000 | 1.022996e-53 | -8.615850e-47 |
| Msa0413730 | Msa1359560 | 0.803176 | 3.949875e-49 | -8.615850e-47 |
| Msa0413730 | Msa1360980 | 0.822634 | 2.132960e-53 | -8.615850e-47 |
| Msa0413730 | Msa1362420 | 0.800291 | 1.543860e-48 | -8.615850e-47 |
| Msa0413730 | Msa1364210 | 0.821850 | 3.242107e-53 | -8.615850e-47 |
| Msa0413730 | Msa1370590 | 0.805782 | 1.130645e-49 | -8.615850e-47 |
| Msa0413730 | Msa1371090 | 0.807290 | 5.433759e-50 | -8.615850e-47 |
| Msa0413730 | Msa1371240 | 0.811503 | 6.776192e-51 | -8.615850e-47 |
| Msa0413730 | Msa1376200 | 0.810679 | 1.022510e-50 | -8.615850e-47 |
| Msa0413730 | Msa1384100 | 0.804261 | 2.351065e-49 | -8.615850e-47 |
| Msa0413730 | Msa1388860 | 0.803457 | 3.454575e-49 | -8.615850e-47 |
| Msa0413730 | Msa1389850 | 0.834550 | 2.809516e-56 | -8.615850e-47 |
| Msa0413730 | Msa1389880 | 0.815591 | 8.548577e-52 | -8.615850e-47 |
| Msa0413730 | Msa1398090 | 0.819442 | 1.158743e-52 | -8.615850e-47 |
| Msa0413730 | Msa1407190 | 0.824767 | 6.752511e-54 | -8.615850e-47 |
| Msa0413730 | Msa1410420 | 0.823512 | 1.331324e-53 | -8.615850e-47 |
| Msa0413730 | Msa1411950 | 0.804120 | 2.516334e-49 | -8.615850e-47 |
| Msa0413730 | Msa1416370 | 0.812697 | 3.721972e-51 | -8.615850e-47 |
| Msa0413730 | Msa1426570 | 0.819497 | 1.125849e-52 | -8.615850e-47 |
| Msa0413730 | Msa1426920 | 0.807245 | 5.553651e-50 | -8.615850e-47 |
| Msa0413730 | Msa1432130 | 0.820052 | 8.410257e-53 | -8.615850e-47 |
| Msa0413730 | Msa1432480 | 0.826746 | 2.290733e-54 | -8.615850e-47 |
| Msa0413730 | Msa1435770 | 0.815432 | 9.270684e-52 | -8.615850e-47 |
| Msa0413730 | Msa1438050 | 0.823502 | 1.338487e-53 | -8.615850e-47 |
| Msa0413730 | Msa1442790 | 0.803263 | 3.789560e-49 | -8.615850e-47 |
| Msa0413730 | Msa1444120 | 0.804869 | 1.755706e-49 | -8.615850e-47 |
| Msa0413730 | Msa1452480 | 0.806838 | 6.773857e-50 | -8.615850e-47 |
| Msa0413730 | Msa1454530 | 0.816721 | 4.779490e-52 | -8.615850e-47 |
| Msa0413730 | Msa1454680 | 0.803730 | 3.031663e-49 | -8.615850e-47 |
| Msa0413730 | Msa1457920 | 0.805146 | 1.536876e-49 | -8.615850e-47 |
| Msa0413730 | Msa1458810 | 0.815381 | 9.516184e-52 | -8.615850e-47 |
| Msa0413730 | Msa1459960 | 0.836846 | 7.363272e-57 | -8.615850e-47 |
| Msa0413730 | Msa1466090 | 0.800454 | 1.430121e-48 | -8.615850e-47 |
| Msa0244980 | Msa0413730 | 0.845724 | 3.396253e-59 | -8.615850e-47 |
| Msa0245430 | Msa0413730 | 0.833463 | 5.255447e-56 | -8.615850e-47 |
| Msa0245580 | Msa0413730 | 0.800694 | 1.278130e-48 | -8.615850e-47 |
| Msa0247060 | Msa0413730 | 0.801835 | 7.465510e-49 | -8.615850e-47 |
| Msa0259270 | Msa0413730 | 0.813286 | 2.763460e-51 | -8.615850e-47 |
| Msa0264530 | Msa0413730 | 0.833469 | 5.238374e-56 | -8.615850e-47 |
| Msa0269470 | Msa0413730 | 0.813465 | 2.524800e-51 | -8.615850e-47 |
| Msa0275360 | Msa0413730 | 0.807147 | 5.827013e-50 | -8.615850e-47 |
| Msa0278790 | Msa0413730 | 0.836863 | 7.294004e-57 | -8.615850e-47 |
| Msa0283420 | Msa0413730 | 0.817063 | 4.004752e-52 | -8.615850e-47 |
| Msa0291520 | Msa0413730 | 0.800446 | 1.435653e-48 | -8.615850e-47 |
| Msa0295590 | Msa0413730 | 0.810168 | 1.318044e-50 | -8.615850e-47 |
| Msa0296920 | Msa0413730 | 0.808626 | 2.823617e-50 | -8.615850e-47 |
| Msa0304840 | Msa0413730 | 0.800345 | 1.505590e-48 | -8.615850e-47 |
| Msa0315850 | Msa0413730 | 0.808896 | 2.472670e-50 | -8.615850e-47 |
| Msa0318720 | Msa0413730 | 0.814159 | 1.775957e-51 | -8.615850e-47 |
| Msa0322240 | Msa0413730 | 0.806184 | 9.306637e-50 | -8.615850e-47 |
| Msa0322900 | Msa0413730 | 0.809248 | 2.077835e-50 | -8.615850e-47 |
| Msa0324240 | Msa0413730 | 0.840834 | 6.849098e-58 | -8.615850e-47 |
| Msa0343190 | Msa0413730 | 0.837390 | 5.346356e-57 | -8.615850e-47 |
| Msa0346990 | Msa0413730 | 0.800962 | 1.126498e-48 | -8.615850e-47 |
| Msa0349700 | Msa0413730 | 0.810617 | 1.054574e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0413730 | MtrunA17_Chr3g0106271 | 89.542 | 153 | 14 | 1 | 1 | 153 | 1 | 151 | 1.52e-84 | 244 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0413730 | AT1G07020.1 | 51.333 | 150 | 62 | 5 | 9 | 151 | 1 | 146 | 1.92e-32 | 112 |
Find 60 sgRNAs with CRISPR-Local
Find 128 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATCTTATCTAAGGACTTC+TGG | 0.211345 | 3_2:+58199556 | None:intergenic |
| TCTTCAAACACTTGAAGATT+TGG | 0.268474 | 3_2:-58199769 | Msa0413730:exon |
| TTGTTAACAAAATTGTGTTT+TGG | 0.342357 | 3_2:-58199669 | Msa0413730:three_prime_UTR |
| TCGTCGTCGACGGCGGATAT+TGG | 0.347800 | 3_2:+58200126 | None:intergenic |
| ATTTAACGCCATCTTATCTA+AGG | 0.362290 | 3_2:+58199548 | None:intergenic |
| AAGGGTGATGGAAGCGATGC+GGG | 0.371248 | 3_2:-58199878 | Msa0413730:CDS |
| AGAAGCTCCGAGATGGGTTT+CGG | 0.384931 | 3_2:-58199839 | Msa0413730:CDS |
| CGCAAGGTGGAGCGGAGAAC+GGG | 0.396362 | 3_2:-58200044 | Msa0413730:CDS |
| GAATTCTCTCATTTCAGCTT+TGG | 0.404954 | 3_2:-58199616 | Msa0413730:three_prime_UTR |
| GCCACCATTGATTCAATTGA+AGG | 0.409218 | 3_2:-58200292 | Msa0413730:intron |
| GAGATGGGTTTCGGAAGTTC+CGG | 0.421286 | 3_2:-58199830 | Msa0413730:CDS |
| CATCTTATCTAAGGACTTCT+GGG | 0.426762 | 3_2:+58199557 | None:intergenic |
| CGACGACGAGGAGGAGGAAG+AGG | 0.442258 | 3_2:-58199998 | Msa0413730:CDS |
| CGTTGAGGGAAGAGGAAAGA+AGG | 0.445972 | 3_2:-58199933 | Msa0413730:CDS |
| TGATCAATCCAACGCTCCTC+CGG | 0.452257 | 3_2:+58199811 | None:intergenic |
| TCTGGGTTACTGTGTCTGAT+TGG | 0.453033 | 3_2:+58199574 | None:intergenic |
| AATACCTTCAATTGAATCAA+TGG | 0.453135 | 3_2:+58200288 | None:intergenic |
| AAGGAGGATTGCACCGTTGA+CGG | 0.456054 | 3_2:-58199914 | Msa0413730:CDS |
| CGGAAGTTCCGGAGGAGCGT+TGG | 0.456212 | 3_2:-58199819 | Msa0413730:CDS |
| GTCGCATTCTCCGCCGTCAA+CGG | 0.462597 | 3_2:+58199901 | None:intergenic |
| CCAGAAGTCCTTAGATAAGA+TGG | 0.474262 | 3_2:-58199556 | Msa0413730:three_prime_UTR |
| TGTAACCGTTCGGAATTTGA+TGG | 0.479310 | 3_2:+58200070 | None:intergenic |
| TCAGAGAACGTTGAGGGAAG+AGG | 0.482010 | 3_2:-58199941 | Msa0413730:CDS |
| GGAGAACGGGATCTCGATGC+TGG | 0.492884 | 3_2:-58200031 | Msa0413730:CDS |
| TGAGATTCAGAGAACGTTGA+GGG | 0.500593 | 3_2:-58199947 | Msa0413730:CDS |
| TTGTTGGAGAAGCTCCGAGA+TGG | 0.515903 | 3_2:-58199846 | Msa0413730:CDS |
| GAACGACGACGACGAGGAGG+AGG | 0.516169 | 3_2:-58200004 | Msa0413730:CDS |
| GAGGAAGAGGAGGAGAGAAG+CGG | 0.520639 | 3_2:-58199985 | Msa0413730:CDS |
| TGAACTGCCGTCGTCGTCGA+CGG | 0.528246 | 3_2:+58200116 | None:intergenic |
| CGCGAATTCCGATGATGCTA+CGG | 0.534423 | 3_2:-58200160 | Msa0413730:CDS |
| TGTTGGAGAAGCTCCGAGAT+GGG | 0.537143 | 3_2:-58199845 | Msa0413730:CDS |
| GCGCAAGGTGGAGCGGAGAA+CGG | 0.537234 | 3_2:-58200045 | Msa0413730:CDS |
| TGAGGGAAGAGGAAAGAAGG+AGG | 0.545263 | 3_2:-58199930 | Msa0413730:CDS |
| GTAGTATTCCGTAGCATCAT+CGG | 0.547237 | 3_2:+58200152 | None:intergenic |
| CCTTGCGCAGTGTAACCGTT+CGG | 0.560407 | 3_2:+58200060 | None:intergenic |
| GACGACGACGGCAGTTCAGA+CGG | 0.571091 | 3_2:-58200111 | Msa0413730:CDS |
| CGACGAGGAGGAGGAAGAGG+AGG | 0.573597 | 3_2:-58199995 | Msa0413730:CDS |
| AGAGGAGGAGAGAAGCGGAG+AGG | 0.573761 | 3_2:-58199980 | Msa0413730:CDS |
| CGTCGACGGCGGATATTGGT+TGG | 0.574955 | 3_2:+58200130 | None:intergenic |
| GGAGAATGCGACAAGGGTGA+TGG | 0.581303 | 3_2:-58199890 | Msa0413730:CDS |
| GGGTGATGGAAGCGATGCGG+GGG | 0.586646 | 3_2:-58199876 | Msa0413730:CDS |
| AGGGTGATGGAAGCGATGCG+GGG | 0.587596 | 3_2:-58199877 | Msa0413730:CDS |
| TATTTGGTAGAAAACGGAAA+CGG | 0.589969 | 3_2:-58200195 | Msa0413730:intron |
| CAAGGGTGATGGAAGCGATG+CGG | 0.604617 | 3_2:-58199879 | Msa0413730:CDS |
| GGAACTTCCGAAACCCATCT+CGG | 0.606506 | 3_2:+58199832 | None:intergenic |
| ATGGGTTTCGGAAGTTCCGG+AGG | 0.614348 | 3_2:-58199827 | Msa0413730:CDS |
| ATGAGATTCAGAGAACGTTG+AGG | 0.621683 | 3_2:-58199948 | Msa0413730:CDS |
| TTACACTGCGCAAGGTGGAG+CGG | 0.623725 | 3_2:-58200052 | Msa0413730:CDS |
| AATTTGATGGAAATCATTCG+CGG | 0.623933 | 3_2:+58200083 | None:intergenic |
| GATTTCCATCAAATTCCGAA+CGG | 0.629334 | 3_2:-58200075 | Msa0413730:CDS |
| TGACGGCGGAGAATGCGACA+AGG | 0.639789 | 3_2:-58199897 | Msa0413730:CDS |
| CCGAACGGTTACACTGCGCA+AGG | 0.642036 | 3_2:-58200060 | Msa0413730:CDS |
| ATATCCGCCGTCGACGACGA+CGG | 0.654071 | 3_2:-58200123 | Msa0413730:CDS |
| GACGGCGGAGAATGCGACAA+GGG | 0.655697 | 3_2:-58199896 | Msa0413730:CDS |
| ACTGCCGTCGTCGTCGACGG+CGG | 0.659221 | 3_2:+58200119 | None:intergenic |
| ACCTTCAATTGAATCAATGG+TGG | 0.662332 | 3_2:+58200291 | None:intergenic |
| GAGGATTGCACCGTTGACGG+CGG | 0.664138 | 3_2:-58199911 | Msa0413730:CDS |
| TCTGAACGACGACGACGAGG+AGG | 0.677665 | 3_2:-58200007 | Msa0413730:CDS |
| AACGGTTACACTGCGCAAGG+TGG | 0.678322 | 3_2:-58200057 | Msa0413730:CDS |
| GGATCTGAACGACGACGACG+AGG | 0.679938 | 3_2:-58200010 | Msa0413730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTTTGTTCTTTATT+TGG | - | chr3_2:58199685-58199704 | Msa0413730:three_prime_UTR | 10.0% |
| !!! | TTTTATTTTTGTTCTTTATT+TGG | - | chr3_2:58199685-58199704 | Msa0413730:three_prime_UTR | 10.0% |
| !!! | TTTGTTCTTCATTTTGATTA+TGG | - | chr3_2:58200171-58200190 | Msa0413730:CDS | 20.0% |
| !!! | TTGTTAACAAAATTGTGTTT+TGG | - | chr3_2:58200227-58200246 | Msa0413730:intron | 20.0% |
| !!! | TGTTAACAAAATTGTGTTTT+GGG | - | chr3_2:58200228-58200247 | Msa0413730:intron | 20.0% |
| !!! | TTTGTTCTTCATTTTGATTA+TGG | - | chr3_2:58200171-58200190 | Msa0413730:CDS | 20.0% |
| !!! | TTGTTAACAAAATTGTGTTT+TGG | - | chr3_2:58200227-58200246 | Msa0413730:intron | 20.0% |
| !!! | TGTTAACAAAATTGTGTTTT+GGG | - | chr3_2:58200228-58200247 | Msa0413730:intron | 20.0% |
| ! | AATACCTTCAATTGAATCAA+TGG | + | chr3_2:58199611-58199630 | None:intergenic | 25.0% |
| !! | GTTCTTTATTTGGTAGAAAA+CGG | - | chr3_2:58199695-58199714 | Msa0413730:three_prime_UTR | 25.0% |
| ! | AATACCTTCAATTGAATCAA+TGG | + | chr3_2:58199611-58199630 | None:intergenic | 25.0% |
| !! | GTTCTTTATTTGGTAGAAAA+CGG | - | chr3_2:58199695-58199714 | Msa0413730:three_prime_UTR | 25.0% |
| TATTTGGTAGAAAACGGAAA+CGG | - | chr3_2:58199701-58199720 | Msa0413730:three_prime_UTR | 30.0% | |
| AATTTGATGGAAATCATTCG+CGG | + | chr3_2:58199816-58199835 | None:intergenic | 30.0% | |
| TCTTCAAACACTTGAAGATT+TGG | - | chr3_2:58200127-58200146 | Msa0413730:CDS | 30.0% | |
| TATTTGGTAGAAAACGGAAA+CGG | - | chr3_2:58199701-58199720 | Msa0413730:three_prime_UTR | 30.0% | |
| AATTTGATGGAAATCATTCG+CGG | + | chr3_2:58199816-58199835 | None:intergenic | 30.0% | |
| TCTTCAAACACTTGAAGATT+TGG | - | chr3_2:58200127-58200146 | Msa0413730:CDS | 30.0% | |
| ACCTTCAATTGAATCAATGG+TGG | + | chr3_2:58199608-58199627 | None:intergenic | 35.0% | |
| GATTTCCATCAAATTCCGAA+CGG | - | chr3_2:58199821-58199840 | Msa0413730:CDS | 35.0% | |
| GAATTCTCTCATTTCAGCTT+TGG | - | chr3_2:58200280-58200299 | Msa0413730:intron | 35.0% | |
| CATCTTATCTAAGGACTTCT+GGG | + | chr3_2:58200342-58200361 | None:intergenic | 35.0% | |
| ACCTTCAATTGAATCAATGG+TGG | + | chr3_2:58199608-58199627 | None:intergenic | 35.0% | |
| GATTTCCATCAAATTCCGAA+CGG | - | chr3_2:58199821-58199840 | Msa0413730:CDS | 35.0% | |
| GAATTCTCTCATTTCAGCTT+TGG | - | chr3_2:58200280-58200299 | Msa0413730:intron | 35.0% | |
| CATCTTATCTAAGGACTTCT+GGG | + | chr3_2:58200342-58200361 | None:intergenic | 35.0% | |
| !! | GCCACCATTGATTCAATTGA+AGG | - | chr3_2:58199604-58199623 | Msa0413730:three_prime_UTR | 40.0% |
| GTAGTATTCCGTAGCATCAT+CGG | + | chr3_2:58199747-58199766 | None:intergenic | 40.0% | |
| TGTAACCGTTCGGAATTTGA+TGG | + | chr3_2:58199829-58199848 | None:intergenic | 40.0% | |
| ATGAGATTCAGAGAACGTTG+AGG | - | chr3_2:58199948-58199967 | Msa0413730:CDS | 40.0% | |
| TGAGATTCAGAGAACGTTGA+GGG | - | chr3_2:58199949-58199968 | Msa0413730:CDS | 40.0% | |
| CCATCTTATCTAAGGACTTC+TGG | + | chr3_2:58200343-58200362 | None:intergenic | 40.0% | |
| CCAGAAGTCCTTAGATAAGA+TGG | - | chr3_2:58200340-58200359 | Msa0413730:five_prime_UTR | 40.0% | |
| !! | GCCACCATTGATTCAATTGA+AGG | - | chr3_2:58199604-58199623 | Msa0413730:three_prime_UTR | 40.0% |
| GTAGTATTCCGTAGCATCAT+CGG | + | chr3_2:58199747-58199766 | None:intergenic | 40.0% | |
| TGTAACCGTTCGGAATTTGA+TGG | + | chr3_2:58199829-58199848 | None:intergenic | 40.0% | |
| ATGAGATTCAGAGAACGTTG+AGG | - | chr3_2:58199948-58199967 | Msa0413730:CDS | 40.0% | |
| TGAGATTCAGAGAACGTTGA+GGG | - | chr3_2:58199949-58199968 | Msa0413730:CDS | 40.0% | |
| CCATCTTATCTAAGGACTTC+TGG | + | chr3_2:58200343-58200362 | None:intergenic | 40.0% | |
| CCAGAAGTCCTTAGATAAGA+TGG | - | chr3_2:58200340-58200359 | Msa0413730:five_prime_UTR | 40.0% | |
| TCTGGGTTACTGTGTCTGAT+TGG | + | chr3_2:58200325-58200344 | None:intergenic | 45.0% | |
| TCTGGGTTACTGTGTCTGAT+TGG | + | chr3_2:58200325-58200344 | None:intergenic | 45.0% | |
| CGCGAATTCCGATGATGCTA+CGG | - | chr3_2:58199736-58199755 | Msa0413730:three_prime_UTR | 50.0% | |
| TCAGAGAACGTTGAGGGAAG+AGG | - | chr3_2:58199955-58199974 | Msa0413730:CDS | 50.0% | |
| CGTTGAGGGAAGAGGAAAGA+AGG | - | chr3_2:58199963-58199982 | Msa0413730:CDS | 50.0% | |
| TGAGGGAAGAGGAAAGAAGG+AGG | - | chr3_2:58199966-58199985 | Msa0413730:CDS | 50.0% | |
| AAGGAGGATTGCACCGTTGA+CGG | - | chr3_2:58199982-58200001 | Msa0413730:CDS | 50.0% | |
| ATGCGGGGGATTTCGTTTGT+TGG | - | chr3_2:58200034-58200053 | Msa0413730:CDS | 50.0% | |
| TTGTTGGAGAAGCTCCGAGA+TGG | - | chr3_2:58200050-58200069 | Msa0413730:CDS | 50.0% | |
| TGTTGGAGAAGCTCCGAGAT+GGG | - | chr3_2:58200051-58200070 | Msa0413730:CDS | 50.0% | |
| ! | AGAAGCTCCGAGATGGGTTT+CGG | - | chr3_2:58200057-58200076 | Msa0413730:CDS | 50.0% |
| GGAACTTCCGAAACCCATCT+CGG | + | chr3_2:58200067-58200086 | None:intergenic | 50.0% | |
| ! | GAGATGGGTTTCGGAAGTTC+CGG | - | chr3_2:58200066-58200085 | Msa0413730:CDS | 50.0% |
| TGATCAATCCAACGCTCCTC+CGG | + | chr3_2:58200088-58200107 | None:intergenic | 50.0% | |
| CGCGAATTCCGATGATGCTA+CGG | - | chr3_2:58199736-58199755 | Msa0413730:three_prime_UTR | 50.0% | |
| TCAGAGAACGTTGAGGGAAG+AGG | - | chr3_2:58199955-58199974 | Msa0413730:CDS | 50.0% | |
| CGTTGAGGGAAGAGGAAAGA+AGG | - | chr3_2:58199963-58199982 | Msa0413730:CDS | 50.0% | |
| TGAGGGAAGAGGAAAGAAGG+AGG | - | chr3_2:58199966-58199985 | Msa0413730:CDS | 50.0% | |
| AAGGAGGATTGCACCGTTGA+CGG | - | chr3_2:58199982-58200001 | Msa0413730:CDS | 50.0% | |
| ATGCGGGGGATTTCGTTTGT+TGG | - | chr3_2:58200034-58200053 | Msa0413730:CDS | 50.0% | |
| TTGTTGGAGAAGCTCCGAGA+TGG | - | chr3_2:58200050-58200069 | Msa0413730:CDS | 50.0% | |
| TGTTGGAGAAGCTCCGAGAT+GGG | - | chr3_2:58200051-58200070 | Msa0413730:CDS | 50.0% | |
| ! | AGAAGCTCCGAGATGGGTTT+CGG | - | chr3_2:58200057-58200076 | Msa0413730:CDS | 50.0% |
| GGAACTTCCGAAACCCATCT+CGG | + | chr3_2:58200067-58200086 | None:intergenic | 50.0% | |
| ! | GAGATGGGTTTCGGAAGTTC+CGG | - | chr3_2:58200066-58200085 | Msa0413730:CDS | 50.0% |
| TGATCAATCCAACGCTCCTC+CGG | + | chr3_2:58200088-58200107 | None:intergenic | 50.0% | |
| CCTTGCGCAGTGTAACCGTT+CGG | + | chr3_2:58199839-58199858 | None:intergenic | 55.0% | |
| AACGGTTACACTGCGCAAGG+TGG | - | chr3_2:58199839-58199858 | Msa0413730:CDS | 55.0% | |
| TTACACTGCGCAAGGTGGAG+CGG | - | chr3_2:58199844-58199863 | Msa0413730:CDS | 55.0% | |
| GAGGAAGAGGAGGAGAGAAG+CGG | - | chr3_2:58199911-58199930 | Msa0413730:CDS | 55.0% | |
| GGAGAATGCGACAAGGGTGA+TGG | - | chr3_2:58200006-58200025 | Msa0413730:CDS | 55.0% | |
| !! | CAAGGGTGATGGAAGCGATG+CGG | - | chr3_2:58200017-58200036 | Msa0413730:CDS | 55.0% |
| !! | AAGGGTGATGGAAGCGATGC+GGG | - | chr3_2:58200018-58200037 | Msa0413730:CDS | 55.0% |
| ATGGGTTTCGGAAGTTCCGG+AGG | - | chr3_2:58200069-58200088 | Msa0413730:CDS | 55.0% | |
| CCTTGCGCAGTGTAACCGTT+CGG | + | chr3_2:58199839-58199858 | None:intergenic | 55.0% | |
| AACGGTTACACTGCGCAAGG+TGG | - | chr3_2:58199839-58199858 | Msa0413730:CDS | 55.0% | |
| TTACACTGCGCAAGGTGGAG+CGG | - | chr3_2:58199844-58199863 | Msa0413730:CDS | 55.0% | |
| GAGGAAGAGGAGGAGAGAAG+CGG | - | chr3_2:58199911-58199930 | Msa0413730:CDS | 55.0% | |
| GGAGAATGCGACAAGGGTGA+TGG | - | chr3_2:58200006-58200025 | Msa0413730:CDS | 55.0% | |
| !! | CAAGGGTGATGGAAGCGATG+CGG | - | chr3_2:58200017-58200036 | Msa0413730:CDS | 55.0% |
| !! | AAGGGTGATGGAAGCGATGC+GGG | - | chr3_2:58200018-58200037 | Msa0413730:CDS | 55.0% |
| ATGGGTTTCGGAAGTTCCGG+AGG | - | chr3_2:58200069-58200088 | Msa0413730:CDS | 55.0% | |
| CGTCGACGGCGGATATTGGT+TGG | + | chr3_2:58199769-58199788 | None:intergenic | 60.0% | |
| TCGTCGTCGACGGCGGATAT+TGG | + | chr3_2:58199773-58199792 | None:intergenic | 60.0% | |
| ATATCCGCCGTCGACGACGA+CGG | - | chr3_2:58199773-58199792 | Msa0413730:exon | 60.0% | |
| TGAACTGCCGTCGTCGTCGA+CGG | + | chr3_2:58199783-58199802 | None:intergenic | 60.0% | |
| GACGACGACGGCAGTTCAGA+CGG | - | chr3_2:58199785-58199804 | Msa0413730:CDS | 60.0% | |
| CCGAACGGTTACACTGCGCA+AGG | - | chr3_2:58199836-58199855 | Msa0413730:CDS | 60.0% | |
| GGAGAACGGGATCTCGATGC+TGG | - | chr3_2:58199865-58199884 | Msa0413730:CDS | 60.0% | |
| GGATCTGAACGACGACGACG+AGG | - | chr3_2:58199886-58199905 | Msa0413730:CDS | 60.0% | |
| TCTGAACGACGACGACGAGG+AGG | - | chr3_2:58199889-58199908 | Msa0413730:CDS | 60.0% | |
| AGAGGAGGAGAGAAGCGGAG+AGG | - | chr3_2:58199916-58199935 | Msa0413730:CDS | 60.0% | |
| GAGGATTGCACCGTTGACGG+CGG | - | chr3_2:58199985-58200004 | Msa0413730:CDS | 60.0% | |
| GTCGCATTCTCCGCCGTCAA+CGG | + | chr3_2:58199998-58200017 | None:intergenic | 60.0% | |
| TGACGGCGGAGAATGCGACA+AGG | - | chr3_2:58199999-58200018 | Msa0413730:CDS | 60.0% | |
| GACGGCGGAGAATGCGACAA+GGG | - | chr3_2:58200000-58200019 | Msa0413730:CDS | 60.0% | |
| !! | AGGGTGATGGAAGCGATGCG+GGG | - | chr3_2:58200019-58200038 | Msa0413730:CDS | 60.0% |
| CGTCGACGGCGGATATTGGT+TGG | + | chr3_2:58199769-58199788 | None:intergenic | 60.0% | |
| TCGTCGTCGACGGCGGATAT+TGG | + | chr3_2:58199773-58199792 | None:intergenic | 60.0% | |
| ATATCCGCCGTCGACGACGA+CGG | - | chr3_2:58199773-58199792 | Msa0413730:exon | 60.0% | |
| TGAACTGCCGTCGTCGTCGA+CGG | + | chr3_2:58199783-58199802 | None:intergenic | 60.0% | |
| GACGACGACGGCAGTTCAGA+CGG | - | chr3_2:58199785-58199804 | Msa0413730:CDS | 60.0% | |
| CCGAACGGTTACACTGCGCA+AGG | - | chr3_2:58199836-58199855 | Msa0413730:CDS | 60.0% | |
| GGAGAACGGGATCTCGATGC+TGG | - | chr3_2:58199865-58199884 | Msa0413730:CDS | 60.0% | |
| GGATCTGAACGACGACGACG+AGG | - | chr3_2:58199886-58199905 | Msa0413730:CDS | 60.0% | |
| TCTGAACGACGACGACGAGG+AGG | - | chr3_2:58199889-58199908 | Msa0413730:CDS | 60.0% | |
| AGAGGAGGAGAGAAGCGGAG+AGG | - | chr3_2:58199916-58199935 | Msa0413730:CDS | 60.0% | |
| GAGGATTGCACCGTTGACGG+CGG | - | chr3_2:58199985-58200004 | Msa0413730:CDS | 60.0% | |
| GTCGCATTCTCCGCCGTCAA+CGG | + | chr3_2:58199998-58200017 | None:intergenic | 60.0% | |
| TGACGGCGGAGAATGCGACA+AGG | - | chr3_2:58199999-58200018 | Msa0413730:CDS | 60.0% | |
| GACGGCGGAGAATGCGACAA+GGG | - | chr3_2:58200000-58200019 | Msa0413730:CDS | 60.0% | |
| !! | AGGGTGATGGAAGCGATGCG+GGG | - | chr3_2:58200019-58200038 | Msa0413730:CDS | 60.0% |
| GCGCAAGGTGGAGCGGAGAA+CGG | - | chr3_2:58199851-58199870 | Msa0413730:CDS | 65.0% | |
| CGCAAGGTGGAGCGGAGAAC+GGG | - | chr3_2:58199852-58199871 | Msa0413730:CDS | 65.0% | |
| GAACGACGACGACGAGGAGG+AGG | - | chr3_2:58199892-58199911 | Msa0413730:CDS | 65.0% | |
| CGACGACGAGGAGGAGGAAG+AGG | - | chr3_2:58199898-58199917 | Msa0413730:CDS | 65.0% | |
| CGACGAGGAGGAGGAAGAGG+AGG | - | chr3_2:58199901-58199920 | Msa0413730:CDS | 65.0% | |
| !! | GGGTGATGGAAGCGATGCGG+GGG | - | chr3_2:58200020-58200039 | Msa0413730:CDS | 65.0% |
| ! | CGGAAGTTCCGGAGGAGCGT+TGG | - | chr3_2:58200077-58200096 | Msa0413730:CDS | 65.0% |
| GCGCAAGGTGGAGCGGAGAA+CGG | - | chr3_2:58199851-58199870 | Msa0413730:CDS | 65.0% | |
| CGCAAGGTGGAGCGGAGAAC+GGG | - | chr3_2:58199852-58199871 | Msa0413730:CDS | 65.0% | |
| GAACGACGACGACGAGGAGG+AGG | - | chr3_2:58199892-58199911 | Msa0413730:CDS | 65.0% | |
| CGACGACGAGGAGGAGGAAG+AGG | - | chr3_2:58199898-58199917 | Msa0413730:CDS | 65.0% | |
| CGACGAGGAGGAGGAAGAGG+AGG | - | chr3_2:58199901-58199920 | Msa0413730:CDS | 65.0% | |
| !! | GGGTGATGGAAGCGATGCGG+GGG | - | chr3_2:58200020-58200039 | Msa0413730:CDS | 65.0% |
| ! | CGGAAGTTCCGGAGGAGCGT+TGG | - | chr3_2:58200077-58200096 | Msa0413730:CDS | 65.0% |
| ACTGCCGTCGTCGTCGACGG+CGG | + | chr3_2:58199780-58199799 | None:intergenic | 70.0% | |
| ACTGCCGTCGTCGTCGACGG+CGG | + | chr3_2:58199780-58199799 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 58199554 | 58200364 | 58199554 | ID=Msa0413730;Name=Msa0413730 |
| chr3_2 | mRNA | 58199554 | 58200364 | 58199554 | ID=Msa0413730-mRNA-1;Parent=Msa0413730;Name=Msa0413730-mRNA-1;_AED=0.00;_eAED=0.00;_QI=41|1|1|1|1|1|2|223|153 |
| chr3_2 | exon | 58199554 | 58200207 | 58199554 | ID=Msa0413730-mRNA-1:exon:12105;Parent=Msa0413730-mRNA-1 |
| chr3_2 | exon | 58200293 | 58200364 | 58200293 | ID=Msa0413730-mRNA-1:exon:12104;Parent=Msa0413730-mRNA-1 |
| chr3_2 | five_prime_UTR | 58200324 | 58200364 | 58200324 | ID=Msa0413730-mRNA-1:five_prime_utr;Parent=Msa0413730-mRNA-1 |
| chr3_2 | CDS | 58200293 | 58200323 | 58200293 | ID=Msa0413730-mRNA-1:cds;Parent=Msa0413730-mRNA-1 |
| chr3_2 | CDS | 58199777 | 58200207 | 58199777 | ID=Msa0413730-mRNA-1:cds;Parent=Msa0413730-mRNA-1 |
| chr3_2 | three_prime_UTR | 58199554 | 58199776 | 58199554 | ID=Msa0413730-mRNA-1:three_prime_utr;Parent=Msa0413730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
