Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40079.t1 | RHN53259.1 | 98.8 | 333 | 4 | 0 | 1 | 333 | 136 | 468 | 5.40E-172 | 613.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40079.t1 | A2XX57 | 84.7 | 333 | 51 | 0 | 1 | 333 | 136 | 468 | 1.3e-150 | 533.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40079.t1 | G7K0Z9 | 98.8 | 333 | 4 | 0 | 1 | 333 | 136 | 468 | 3.9e-172 | 613.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene40079 | 0.880849 | 3.91E-70 | -1.69E-46 |
| MS.gene049159 | MS.gene40079 | 0.841067 | 5.95E-58 | -1.69E-46 |
| MS.gene049254 | MS.gene40079 | 0.867422 | 1.38E-65 | -1.69E-46 |
| MS.gene049272 | MS.gene40079 | 0.809647 | 1.71E-50 | -1.69E-46 |
| MS.gene049343 | MS.gene40079 | 0.816698 | 4.84E-52 | -1.69E-46 |
| MS.gene049350 | MS.gene40079 | 0.812236 | 4.69E-51 | -1.69E-46 |
| MS.gene049368 | MS.gene40079 | 0.83837 | 2.99E-57 | -1.69E-46 |
| MS.gene049404 | MS.gene40079 | 0.810519 | 1.11E-50 | -1.69E-46 |
| MS.gene049435 | MS.gene40079 | 0.803546 | 3.31E-49 | -1.69E-46 |
| MS.gene049499 | MS.gene40079 | 0.8398 | 1.28E-57 | -1.69E-46 |
| MS.gene049585 | MS.gene40079 | 0.80623 | 9.10E-50 | -1.69E-46 |
| MS.gene049647 | MS.gene40079 | 0.801055 | 1.08E-48 | -1.69E-46 |
| MS.gene049652 | MS.gene40079 | 0.805074 | 1.59E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene40079 | 0.827268 | 1.72E-54 | -1.69E-46 |
| MS.gene049744 | MS.gene40079 | 0.820004 | 8.63E-53 | -1.69E-46 |
| MS.gene049807 | MS.gene40079 | 0.805075 | 1.59E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene40079 | 0.808507 | 2.99E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene40079 | 0.845727 | 3.39E-59 | -1.69E-46 |
| MS.gene050026 | MS.gene40079 | 0.815981 | 7.00E-52 | -1.69E-46 |
| MS.gene050559 | MS.gene40079 | 0.83977 | 1.30E-57 | -1.69E-46 |
| MS.gene050561 | MS.gene40079 | 0.841596 | 4.32E-58 | -1.69E-46 |
| MS.gene050562 | MS.gene40079 | 0.838066 | 3.59E-57 | -1.69E-46 |
| MS.gene050844 | MS.gene40079 | 0.804572 | 2.03E-49 | -1.69E-46 |
| MS.gene051181 | MS.gene40079 | 0.811812 | 5.80E-51 | -1.69E-46 |
| MS.gene051198 | MS.gene40079 | 0.84271 | 2.19E-58 | -1.69E-46 |
| MS.gene051210 | MS.gene40079 | 0.813119 | 3.01E-51 | -1.69E-46 |
| MS.gene051247 | MS.gene40079 | 0.834746 | 2.51E-56 | -1.69E-46 |
| MS.gene051279 | MS.gene40079 | 0.837945 | 3.85E-57 | -1.69E-46 |
| MS.gene051332 | MS.gene40079 | 0.859839 | 3.13E-63 | -1.69E-46 |
| MS.gene051363 | MS.gene40079 | 0.803587 | 3.25E-49 | -1.69E-46 |
| MS.gene051490 | MS.gene40079 | 0.820328 | 7.27E-53 | -1.69E-46 |
| MS.gene051543 | MS.gene40079 | 0.824202 | 9.17E-54 | -1.69E-46 |
| MS.gene051744 | MS.gene40079 | 0.869376 | 3.24E-66 | -1.69E-46 |
| MS.gene051800 | MS.gene40079 | 0.845557 | 3.77E-59 | -1.69E-46 |
| MS.gene05191 | MS.gene40079 | 0.813201 | 2.88E-51 | -1.69E-46 |
| MS.gene051957 | MS.gene40079 | 0.806053 | 9.92E-50 | -1.69E-46 |
| MS.gene052037 | MS.gene40079 | 0.826235 | 3.03E-54 | -1.69E-46 |
| MS.gene052239 | MS.gene40079 | -0.815038 | 1.13E-51 | -1.69E-46 |
| MS.gene052307 | MS.gene40079 | 0.825856 | 3.73E-54 | -1.69E-46 |
| MS.gene052333 | MS.gene40079 | 0.806572 | 7.71E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene40079 | 0.8361 | 1.14E-56 | -1.69E-46 |
| MS.gene052516 | MS.gene40079 | 0.828088 | 1.09E-54 | -1.69E-46 |
| MS.gene052519 | MS.gene40079 | 0.830627 | 2.64E-55 | -1.69E-46 |
| MS.gene052534 | MS.gene40079 | 0.815542 | 8.77E-52 | -1.69E-46 |
| MS.gene052582 | MS.gene40079 | 0.8405 | 8.37E-58 | -1.69E-46 |
| MS.gene052584 | MS.gene40079 | 0.831159 | 1.95E-55 | -1.69E-46 |
| MS.gene052586 | MS.gene40079 | 0.814362 | 1.60E-51 | -1.69E-46 |
| MS.gene052609 | MS.gene40079 | 0.852446 | 4.59E-61 | -1.69E-46 |
| MS.gene052773 | MS.gene40079 | 0.84071 | 7.38E-58 | -1.69E-46 |
| MS.gene052775 | MS.gene40079 | 0.803116 | 4.06E-49 | -1.69E-46 |
| MS.gene052855 | MS.gene40079 | 0.803159 | 3.98E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene40079 | 0.823655 | 1.23E-53 | -1.69E-46 |
| MS.gene052954 | MS.gene40079 | 0.800867 | 1.18E-48 | -1.69E-46 |
| MS.gene053079 | MS.gene40079 | 0.835378 | 1.74E-56 | -1.69E-46 |
| MS.gene05308 | MS.gene40079 | 0.823667 | 1.22E-53 | -1.69E-46 |
| MS.gene053166 | MS.gene40079 | 0.822662 | 2.10E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene40079 | 0.851173 | 1.05E-60 | -1.69E-46 |
| MS.gene05350 | MS.gene40079 | 0.828462 | 8.87E-55 | -1.69E-46 |
| MS.gene05364 | MS.gene40079 | 0.802312 | 5.96E-49 | -1.69E-46 |
| MS.gene053998 | MS.gene40079 | 0.805933 | 1.05E-49 | -1.69E-46 |
| MS.gene05414 | MS.gene40079 | 0.8011 | 1.06E-48 | -1.69E-46 |
| MS.gene05415 | MS.gene40079 | 0.828916 | 6.89E-55 | -1.69E-46 |
| MS.gene054236 | MS.gene40079 | 0.832422 | 9.54E-56 | -1.69E-46 |
| MS.gene05423 | MS.gene40079 | 0.807417 | 5.11E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene40079 | 0.81815 | 2.28E-52 | -1.69E-46 |
| MS.gene054468 | MS.gene40079 | 0.800209 | 1.60E-48 | -1.69E-46 |
| MS.gene054472 | MS.gene40079 | 0.811368 | 7.25E-51 | -1.69E-46 |
| MS.gene054479 | MS.gene40079 | 0.855968 | 4.42E-62 | -1.69E-46 |
| MS.gene054576 | MS.gene40079 | 0.84867 | 5.29E-60 | -1.69E-46 |
| MS.gene05458 | MS.gene40079 | 0.831236 | 1.87E-55 | -1.69E-46 |
| MS.gene054641 | MS.gene40079 | 0.804503 | 2.09E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene40079 | 0.871809 | 5.15E-67 | -1.69E-46 |
| MS.gene054709 | MS.gene40079 | 0.808987 | 2.36E-50 | -1.69E-46 |
| MS.gene054775 | MS.gene40079 | 0.815504 | 8.94E-52 | -1.69E-46 |
| MS.gene054892 | MS.gene40079 | 0.812201 | 4.78E-51 | -1.69E-46 |
| MS.gene054893 | MS.gene40079 | 0.804699 | 1.91E-49 | -1.69E-46 |
| MS.gene054943 | MS.gene40079 | 0.819791 | 9.65E-53 | -1.69E-46 |
| MS.gene054991 | MS.gene40079 | 0.823766 | 1.16E-53 | -1.69E-46 |
| MS.gene055227 | MS.gene40079 | 0.821115 | 4.79E-53 | -1.69E-46 |
| MS.gene055228 | MS.gene40079 | 0.829489 | 5.00E-55 | -1.69E-46 |
| MS.gene055464 | MS.gene40079 | 0.826029 | 3.39E-54 | -1.69E-46 |
| MS.gene055466 | MS.gene40079 | 0.800507 | 1.40E-48 | -1.69E-46 |
| MS.gene055513 | MS.gene40079 | 0.820075 | 8.30E-53 | -1.69E-46 |
| MS.gene055586 | MS.gene40079 | 0.842038 | 3.30E-58 | -1.69E-46 |
| MS.gene055589 | MS.gene40079 | 0.800918 | 1.15E-48 | -1.69E-46 |
| MS.gene055623 | MS.gene40079 | 0.816825 | 4.53E-52 | -1.69E-46 |
| MS.gene055724 | MS.gene40079 | 0.815902 | 7.29E-52 | -1.69E-46 |
| MS.gene055778 | MS.gene40079 | 0.807611 | 4.64E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene40079 | 0.854808 | 9.62E-62 | -1.69E-46 |
| MS.gene055864 | MS.gene40079 | 0.825841 | 3.76E-54 | -1.69E-46 |
| MS.gene055926 | MS.gene40079 | 0.818046 | 2.40E-52 | -1.69E-46 |
| MS.gene05604 | MS.gene40079 | 0.820371 | 7.11E-53 | -1.69E-46 |
| MS.gene056050 | MS.gene40079 | 0.86298 | 3.45E-64 | -1.69E-46 |
| MS.gene056162 | MS.gene40079 | 0.833847 | 4.22E-56 | -1.69E-46 |
| MS.gene056173 | MS.gene40079 | 0.801564 | 8.48E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene40079 | 0.845808 | 3.22E-59 | -1.69E-46 |
| MS.gene056252 | MS.gene40079 | 0.812143 | 4.92E-51 | -1.69E-46 |
| MS.gene056308 | MS.gene40079 | 0.818501 | 1.90E-52 | -1.69E-46 |
| MS.gene056366 | MS.gene40079 | 0.828645 | 8.01E-55 | -1.69E-46 |
| MS.gene056373 | MS.gene40079 | 0.807458 | 5.01E-50 | -1.69E-46 |
| MS.gene056480 | MS.gene40079 | 0.803843 | 2.87E-49 | -1.69E-46 |
| MS.gene056507 | MS.gene40079 | 0.812563 | 3.98E-51 | -1.69E-46 |
| MS.gene056595 | MS.gene40079 | 0.820653 | 6.12E-53 | -1.69E-46 |
| MS.gene05659 | MS.gene40079 | 0.807769 | 4.30E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene40079 | 0.853204 | 2.79E-61 | -1.69E-46 |
| MS.gene056776 | MS.gene40079 | 0.805091 | 1.58E-49 | -1.69E-46 |
| MS.gene056854 | MS.gene40079 | 0.812907 | 3.35E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene40079 | 0.869324 | 3.37E-66 | -1.69E-46 |
| MS.gene05690 | MS.gene40079 | 0.83884 | 2.26E-57 | -1.69E-46 |
| MS.gene056973 | MS.gene40079 | 0.829406 | 5.24E-55 | -1.69E-46 |
| MS.gene057026 | MS.gene40079 | 0.842838 | 2.03E-58 | -1.69E-46 |
| MS.gene057034 | MS.gene40079 | 0.834734 | 2.52E-56 | -1.69E-46 |
| MS.gene057102 | MS.gene40079 | 0.825989 | 3.47E-54 | -1.69E-46 |
| MS.gene057132 | MS.gene40079 | 0.814356 | 1.61E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene40079 | 0.860114 | 2.59E-63 | -1.69E-46 |
| MS.gene057324 | MS.gene40079 | 0.80647 | 8.10E-50 | -1.69E-46 |
| MS.gene057360 | MS.gene40079 | 0.805414 | 1.35E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene40079 | 0.812064 | 5.12E-51 | -1.69E-46 |
| MS.gene057598 | MS.gene40079 | 0.830322 | 3.14E-55 | -1.69E-46 |
| MS.gene057611 | MS.gene40079 | 0.828538 | 8.50E-55 | -1.69E-46 |
| MS.gene057855 | MS.gene40079 | 0.861219 | 1.20E-63 | -1.69E-46 |
| MS.gene057869 | MS.gene40079 | 0.827276 | 1.71E-54 | -1.69E-46 |
| MS.gene057915 | MS.gene40079 | 0.835086 | 2.06E-56 | -1.69E-46 |
| MS.gene058008 | MS.gene40079 | 0.823846 | 1.11E-53 | -1.69E-46 |
| MS.gene058009 | MS.gene40079 | 0.836081 | 1.15E-56 | -1.69E-46 |
| MS.gene058010 | MS.gene40079 | 0.854288 | 1.36E-61 | -1.69E-46 |
| MS.gene058037 | MS.gene40079 | 0.823509 | 1.33E-53 | -1.69E-46 |
| MS.gene058081 | MS.gene40079 | 0.823133 | 1.63E-53 | -1.69E-46 |
| MS.gene058279 | MS.gene40079 | 0.802499 | 5.45E-49 | -1.69E-46 |
| MS.gene058289 | MS.gene40079 | 0.820948 | 5.24E-53 | -1.69E-46 |
| MS.gene058292 | MS.gene40079 | 0.808168 | 3.54E-50 | -1.69E-46 |
| MS.gene058330 | MS.gene40079 | 0.802487 | 5.48E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene40079 | 0.824349 | 8.47E-54 | -1.69E-46 |
| MS.gene058625 | MS.gene40079 | 0.863704 | 2.06E-64 | -1.69E-46 |
| MS.gene058781 | MS.gene40079 | 0.850191 | 1.99E-60 | -1.69E-46 |
| MS.gene058783 | MS.gene40079 | 0.853012 | 3.16E-61 | -1.69E-46 |
| MS.gene058919 | MS.gene40079 | 0.803844 | 2.87E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene40079 | 0.868787 | 5.04E-66 | -1.69E-46 |
| MS.gene05897 | MS.gene40079 | 0.831777 | 1.38E-55 | -1.69E-46 |
| MS.gene059170 | MS.gene40079 | 0.801116 | 1.05E-48 | -1.69E-46 |
| MS.gene059272 | MS.gene40079 | 0.835957 | 1.24E-56 | -1.69E-46 |
| MS.gene059438 | MS.gene40079 | 0.82277 | 1.98E-53 | -1.69E-46 |
| MS.gene059439 | MS.gene40079 | 0.857972 | 1.13E-62 | -1.69E-46 |
| MS.gene059440 | MS.gene40079 | 0.808519 | 2.98E-50 | -1.69E-46 |
| MS.gene05952 | MS.gene40079 | 0.80055 | 1.37E-48 | -1.69E-46 |
| MS.gene059570 | MS.gene40079 | 0.828099 | 1.09E-54 | -1.69E-46 |
| MS.gene059584 | MS.gene40079 | 0.801716 | 7.90E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene40079 | 0.818133 | 2.30E-52 | -1.69E-46 |
| MS.gene05973 | MS.gene40079 | 0.803 | 4.30E-49 | -1.69E-46 |
| MS.gene059842 | MS.gene40079 | 0.804899 | 1.73E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene40079 | -0.831696 | 1.44E-55 | -1.69E-46 |
| MS.gene059965 | MS.gene40079 | 0.82424 | 8.98E-54 | -1.69E-46 |
| MS.gene060011 | MS.gene40079 | 0.823108 | 1.65E-53 | -1.69E-46 |
| MS.gene060167 | MS.gene40079 | 0.817592 | 3.04E-52 | -1.69E-46 |
| MS.gene060312 | MS.gene40079 | 0.801936 | 7.12E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene40079 | 0.800676 | 1.29E-48 | -1.69E-46 |
| MS.gene060365 | MS.gene40079 | 0.830123 | 3.51E-55 | -1.69E-46 |
| MS.gene060373 | MS.gene40079 | 0.833813 | 4.30E-56 | -1.69E-46 |
| MS.gene060435 | MS.gene40079 | 0.811642 | 6.32E-51 | -1.69E-46 |
| MS.gene060521 | MS.gene40079 | 0.813389 | 2.62E-51 | -1.69E-46 |
| MS.gene060527 | MS.gene40079 | 0.81431 | 1.64E-51 | -1.69E-46 |
| MS.gene06052 | MS.gene40079 | 0.848008 | 8.06E-60 | -1.69E-46 |
| MS.gene060777 | MS.gene40079 | 0.830088 | 3.58E-55 | -1.69E-46 |
| MS.gene060785 | MS.gene40079 | 0.825681 | 4.11E-54 | -1.69E-46 |
| MS.gene060840 | MS.gene40079 | 0.800371 | 1.49E-48 | -1.69E-46 |
| MS.gene060932 | MS.gene40079 | 0.804901 | 1.73E-49 | -1.69E-46 |
| MS.gene060933 | MS.gene40079 | 0.843474 | 1.37E-58 | -1.69E-46 |
| MS.gene060935 | MS.gene40079 | 0.869851 | 2.27E-66 | -1.69E-46 |
| MS.gene060937 | MS.gene40079 | 0.874414 | 6.88E-68 | -1.69E-46 |
| MS.gene061100 | MS.gene40079 | 0.801147 | 1.03E-48 | -1.69E-46 |
| MS.gene061188 | MS.gene40079 | 0.844167 | 8.94E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40079.t1 | MTR_5g005440 | 98.799 | 333 | 4 | 0 | 1 | 333 | 136 | 468 | 0.0 | 665 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40079.t1 | AT1G64990 | 84.384 | 333 | 52 | 0 | 1 | 333 | 136 | 468 | 0.0 | 531 |
| MS.gene40079.t1 | AT1G64990 | 84.384 | 333 | 52 | 0 | 1 | 333 | 136 | 468 | 0.0 | 531 |
| MS.gene40079.t1 | AT4G27630 | 85.285 | 333 | 48 | 1 | 1 | 333 | 136 | 467 | 0.0 | 529 |
| MS.gene40079.t1 | AT4G27630 | 84.639 | 332 | 51 | 0 | 2 | 333 | 17 | 348 | 0.0 | 525 |
| MS.gene40079.t1 | AT4G27630 | 84.639 | 332 | 51 | 0 | 2 | 333 | 17 | 348 | 0.0 | 525 |
| MS.gene40079.t1 | AT4G27630 | 79.552 | 357 | 48 | 2 | 1 | 333 | 136 | 491 | 0.0 | 516 |
| MS.gene40079.t1 | AT4G27630 | 82.008 | 239 | 42 | 1 | 1 | 239 | 136 | 373 | 1.41e-138 | 398 |
| MS.gene40079.t1 | AT4G27630 | 82.051 | 234 | 42 | 0 | 6 | 239 | 21 | 254 | 1.55e-138 | 394 |
| MS.gene40079.t1 | AT4G27630 | 82.008 | 239 | 42 | 1 | 1 | 239 | 136 | 373 | 2.27e-138 | 398 |
Find 63 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTGGATGTTTATCAATT+TGG | 0.155871 | 5.4:-1046323 | None:intergenic |
| GCTTTCAAAGCAATTGTTCT+TGG | 0.239320 | 5.4:+1042536 | MS.gene40079:CDS |
| ATGGCTGTTCTATCTGGTTT+TGG | 0.288518 | 5.4:+1040596 | MS.gene40079:CDS |
| ACCGGTGATAAAAGTCAAAT+TGG | 0.292591 | 5.4:-1046230 | None:intergenic |
| ACTGTCATGGCTGTTCTATC+TGG | 0.294941 | 5.4:+1040590 | MS.gene40079:CDS |
| CCAATGCCATCACCTGATAA+AGG | 0.308808 | 5.4:+1040518 | None:intergenic |
| GACACTAACCTGAGATAATA+AGG | 0.315088 | 5.4:-1043805 | None:intergenic |
| GATTATCATTACAGAGGTAT+TGG | 0.353524 | 5.4:+1046197 | MS.gene40079:CDS |
| CCTCAATTGGTCAGTAGAAT+TGG | 0.365468 | 5.4:+1040554 | MS.gene40079:CDS |
| AACACACTTATACCTGTATT+CGG | 0.368811 | 5.4:-1045521 | None:intergenic |
| TTTCTTTACTATGCCTCAAT+TGG | 0.379528 | 5.4:+1040541 | MS.gene40079:CDS |
| GAAAATTATTCTCGCTCAAA+TGG | 0.382660 | 5.4:+1040739 | MS.gene40079:CDS |
| GAAACTAACCTTGCTCCTTC+TGG | 0.382664 | 5.4:-1041105 | None:intergenic |
| ATTATCATTACAGAGGTATT+GGG | 0.393721 | 5.4:+1046198 | MS.gene40079:CDS |
| CTGCTGCATATTCTCGAACT+TGG | 0.408126 | 5.4:+1042814 | MS.gene40079:CDS |
| ATAGTAAAGAAACCTTTATC+AGG | 0.415101 | 5.4:-1040530 | None:intergenic |
| CTCCTTCTGGTCCTCTTGCA+CGG | 0.431487 | 5.4:-1041092 | None:intergenic |
| GTCAGTAGAATTGGTGTCAT+TGG | 0.434768 | 5.4:+1040563 | MS.gene40079:CDS |
| TATATTTCCTTGCTATTCAT+CGG | 0.456786 | 5.4:+1044724 | MS.gene40079:CDS |
| GGAAACTGAGATCAAGGCCT+TGG | 0.461760 | 5.4:+1040670 | MS.gene40079:CDS |
| AAATGCAGCCTTATTATCTC+AGG | 0.465152 | 5.4:+1043797 | MS.gene40079:CDS |
| ATTCTTAACAAATTTAATGA+AGG | 0.466176 | 5.4:+1044774 | MS.gene40079:CDS |
| AAAGCTTAGCAACCGAATAC+AGG | 0.469068 | 5.4:+1045509 | MS.gene40079:CDS |
| AATACGTTTGATAAAAGATC+TGG | 0.470086 | 5.4:-1041050 | None:intergenic |
| AGGCATGGAAGCAGAGGTAC+TGG | 0.470967 | 5.4:+1042503 | MS.gene40079:CDS |
| GGACATATGCAGAATCTACT+AGG | 0.481782 | 5.4:+1042840 | MS.gene40079:CDS |
| TTGTGTGTATAAAATGATCA+AGG | 0.483771 | 5.4:+1042881 | MS.gene40079:CDS |
| CTTGCTATTCATCGGAATGT+TGG | 0.489185 | 5.4:+1044732 | MS.gene40079:CDS |
| CCTTTATCAGGTGATGGCAT+TGG | 0.491266 | 5.4:-1040518 | None:intergenic |
| AAGAGTGATAAATAACTGTA+TGG | 0.498599 | 5.4:-1040632 | None:intergenic |
| AAGTTACACTCACAATCAAT+TGG | 0.502259 | 5.4:-1046339 | None:intergenic |
| CTGCATAAGTTGTCTTTCCA+AGG | 0.506266 | 5.4:-1040687 | None:intergenic |
| GATTGAGGAAACTGAGATCA+AGG | 0.512109 | 5.4:+1040664 | MS.gene40079:CDS |
| GCTGTTTCAAGAGTTGGAAG+TGG | 0.519122 | 5.4:+1045409 | MS.gene40079:CDS |
| ACTCTTCATCAGAGAGATTG+AGG | 0.519209 | 5.4:+1040649 | MS.gene40079:CDS |
| AATGCGCAGATAGTAAAAGT+AGG | 0.522155 | 5.4:-1046290 | None:intergenic |
| TGTCATTGGTGTTACTGTCA+TGG | 0.534360 | 5.4:+1040577 | MS.gene40079:CDS |
| CCAATTCTACTGACCAATTG+AGG | 0.538924 | 5.4:-1040554 | None:intergenic |
| GTGGTTTGATGCAATATTTG+TGG | 0.542218 | 5.4:+1046251 | MS.gene40079:CDS |
| CTATGAGCTTCGACAAGCAA+AGG | 0.544516 | 5.4:+1042563 | MS.gene40079:CDS |
| AAAATATGTTCCCATTATCT+CGG | 0.545480 | 5.4:-1045461 | None:intergenic |
| TATTCTCGCTCAAATGGAGA+TGG | 0.549765 | 5.4:+1040745 | MS.gene40079:CDS |
| ATGCGCAGATAGTAAAAGTA+GGG | 0.557128 | 5.4:-1046289 | None:intergenic |
| AAGAAACCTTTATCAGGTGA+TGG | 0.558347 | 5.4:-1040524 | None:intergenic |
| ATACTTATCATCCTTGTCAC+GGG | 0.571650 | 5.4:-1043747 | None:intergenic |
| CTTATGCAGTCAATTGAGAC+TGG | 0.572440 | 5.4:+1040701 | MS.gene40079:CDS |
| GCATATTCTCGAACTTGGAA+AGG | 0.574715 | 5.4:+1042819 | MS.gene40079:CDS |
| ATGTGAAGATATCAAAGGCA+TGG | 0.581837 | 5.4:+1042488 | MS.gene40079:intron |
| GTTGAATGTGAAGATATCAA+AGG | 0.586462 | 5.4:+1042483 | MS.gene40079:intron |
| TATACTTATCATCCTTGTCA+CGG | 0.589557 | 5.4:-1043748 | None:intergenic |
| CAGATAGTAAAAGTAGGGAA+AGG | 0.591096 | 5.4:-1046284 | None:intergenic |
| CAAGAGGACCAGAAGGAGCA+AGG | 0.594045 | 5.4:+1041097 | MS.gene40079:CDS |
| AGTTGTTCGATCCGTGCAAG+AGG | 0.594350 | 5.4:+1041081 | MS.gene40079:CDS |
| CAAATATTGCATCAAACCAC+CGG | 0.610784 | 5.4:-1046248 | None:intergenic |
| TATCAAAGGCATGGAAGCAG+AGG | 0.616520 | 5.4:+1042497 | MS.gene40079:CDS |
| ATCCGTGCAAGAGGACCAGA+AGG | 0.621117 | 5.4:+1041090 | MS.gene40079:CDS |
| GTTCAGTTGATCCCGTGACA+AGG | 0.624543 | 5.4:+1043736 | MS.gene40079:CDS |
| CAACATTCCGATGAATAGCA+AGG | 0.630088 | 5.4:-1044731 | None:intergenic |
| GAACAAGCAAGGATCTGAAG+AGG | 0.635624 | 5.4:+1040769 | MS.gene40079:CDS |
| ATGGAGATGGAGAACAAGCA+AGG | 0.635747 | 5.4:+1040758 | MS.gene40079:CDS |
| ATCATTACAGAGGTATTGGG+CGG | 0.644393 | 5.4:+1046201 | MS.gene40079:CDS |
| TGACAGGATTATCATTACAG+AGG | 0.676858 | 5.4:+1046191 | MS.gene40079:intron |
| TTGGTTGTGATATCAGTGCG+TGG | 0.694691 | 5.4:+1044751 | MS.gene40079:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGAATAAAATATGATAT+AGG | + | chr5.4:1044977-1044996 | MS.gene40079:intron | 10.0% |
| !! | AAAGAAAATTATTGAATATA+AGG | + | chr5.4:1045135-1045154 | MS.gene40079:intron | 10.0% |
| !! | AATATCAAATAGAAAAAAAT+AGG | - | chr5.4:1044838-1044857 | None:intergenic | 10.0% |
| !! | AATAAAACCTATAAAGAAAA+TGG | - | chr5.4:1040967-1040986 | None:intergenic | 15.0% |
| !! | AATATATTGCTAATTGTATT+AGG | + | chr5.4:1043125-1043144 | MS.gene40079:intron | 15.0% |
| !! | ATATTTATCCTAATCAATTT+AGG | - | chr5.4:1043996-1044015 | None:intergenic | 15.0% |
| !! | ATTCTTAACAAATTTAATGA+AGG | + | chr5.4:1044774-1044793 | MS.gene40079:CDS | 15.0% |
| !! | GGAAAAAAAGTAATTATATT+TGG | - | chr5.4:1043649-1043668 | None:intergenic | 15.0% |
| !! | TATAAACAAAAAGAATTCTT+AGG | - | chr5.4:1044353-1044372 | None:intergenic | 15.0% |
| !!! | AATATTTTAATTGATATGCA+TGG | + | chr5.4:1045676-1045695 | MS.gene40079:intron | 15.0% |
| !!! | ATATTTTATATGCTAGATTA+AGG | + | chr5.4:1042934-1042953 | MS.gene40079:intron | 15.0% |
| !!! | TTATCATTATTTTTTACCTT+AGG | + | chr5.4:1044496-1044515 | MS.gene40079:intron | 15.0% |
| !!! | TTTTTCTATTTGATATTTCT+TGG | + | chr5.4:1044841-1044860 | MS.gene40079:intron | 15.0% |
| !! | AAAATTTACTGTAGTCAATA+TGG | + | chr5.4:1043540-1043559 | MS.gene40079:intron | 20.0% |
| !! | AAATCAGAAATACTGAATTT+AGG | + | chr5.4:1045724-1045743 | MS.gene40079:intron | 20.0% |
| !! | AATTATATTGACATTTCCTT+TGG | + | chr5.4:1040873-1040892 | MS.gene40079:intron | 20.0% |
| !! | AGCAACAAAAAAGAAATTTA+AGG | - | chr5.4:1044093-1044112 | None:intergenic | 20.0% |
| !! | ATGATAGTACAAATATTCAA+AGG | + | chr5.4:1041482-1041501 | MS.gene40079:intron | 20.0% |
| !! | CAAAACAAAAATTTGAACTT+AGG | - | chr5.4:1045372-1045391 | None:intergenic | 20.0% |
| !! | CTGAATGTATAGATATAAAT+AGG | - | chr5.4:1045990-1046009 | None:intergenic | 20.0% |
| !! | GAAACATATAAATTGAGAAA+TGG | - | chr5.4:1042230-1042249 | None:intergenic | 20.0% |
| !! | GAATTTAGTACAATGTTTAA+TGG | + | chr5.4:1041525-1041544 | MS.gene40079:intron | 20.0% |
| !! | TAGATATAAATAGGATTGAA+AGG | - | chr5.4:1045981-1046000 | None:intergenic | 20.0% |
| !! | TATTAAAATTGTGAAACCAA+AGG | - | chr5.4:1040892-1040911 | None:intergenic | 20.0% |
| !! | TCTTTAAATAAGAATGCATT+AGG | - | chr5.4:1043874-1043893 | None:intergenic | 20.0% |
| !! | TGAAGTGATTCATTTAATAA+TGG | + | chr5.4:1042377-1042396 | MS.gene40079:intron | 20.0% |
| !! | TGAATATCCAATAAAGAAAA+AGG | - | chr5.4:1042194-1042213 | None:intergenic | 20.0% |
| !!! | AAAATTTATATCTCTAAAGC+AGG | - | chr5.4:1041161-1041180 | None:intergenic | 20.0% |
| !!! | AAGTTTTCCTTTTTCTTTAT+TGG | + | chr5.4:1042184-1042203 | MS.gene40079:intron | 20.0% |
| !!! | AATACATATTGGAAGTTTTA+AGG | + | chr5.4:1044923-1044942 | MS.gene40079:intron | 20.0% |
| !!! | ATGTTTCCTTTTTATCAAAA+TGG | + | chr5.4:1042243-1042262 | MS.gene40079:intron | 20.0% |
| !!! | CATTTTATACACACAATAAA+CGG | - | chr5.4:1042877-1042896 | None:intergenic | 20.0% |
| !!! | CTAAGTTCAAATTTTTGTTT+TGG | + | chr5.4:1045370-1045389 | MS.gene40079:intron | 20.0% |
| !!! | CTATTTTCCAGTTTTTTTAA+AGG | - | chr5.4:1042630-1042649 | None:intergenic | 20.0% |
| !!! | GATTTTTTTCACACAAATTA+AGG | - | chr5.4:1043378-1043397 | None:intergenic | 20.0% |
| !!! | TATCTTCTATTCTTTTAATC+AGG | + | chr5.4:1045485-1045504 | MS.gene40079:CDS | 20.0% |
| !!! | TGCTTTAGAGATATAAATTT+TGG | + | chr5.4:1041160-1041179 | MS.gene40079:intron | 20.0% |
| !!! | TGTTTCCTTTTTATCAAAAT+GGG | + | chr5.4:1042244-1042263 | MS.gene40079:intron | 20.0% |
| !!! | TTCTTTTGTTTTATTTAAGC+TGG | - | chr5.4:1045286-1045305 | None:intergenic | 20.0% |
| ! | AAAATATGTTCCCATTATCT+CGG | - | chr5.4:1045464-1045483 | None:intergenic | 25.0% |
| ! | AAATCTGCTTACTATGAAAA+TGG | + | chr5.4:1042773-1042792 | MS.gene40079:intron | 25.0% |
| ! | AAGAGTGATAAATAACTGTA+TGG | - | chr5.4:1040635-1040654 | None:intergenic | 25.0% |
| ! | AAGGTTTACTTAAACGTTAT+TGG | - | chr5.4:1045962-1045981 | None:intergenic | 25.0% |
| ! | AATAAATAGTTTCTGTTGAG+TGG | - | chr5.4:1045581-1045600 | None:intergenic | 25.0% |
| ! | AATACGTTTGATAAAAGATC+TGG | - | chr5.4:1041053-1041072 | None:intergenic | 25.0% |
| ! | AATGAATAATATACCTCTTC+TGG | + | chr5.4:1045044-1045063 | MS.gene40079:intron | 25.0% |
| ! | AATTTACCAAAATATCCATG+TGG | + | chr5.4:1043207-1043226 | MS.gene40079:intron | 25.0% |
| ! | ACCATTTACGAAATACATAT+TGG | + | chr5.4:1044912-1044931 | MS.gene40079:intron | 25.0% |
| ! | ACTTATTTGCATGATTGAAA+GGG | - | chr5.4:1042275-1042294 | None:intergenic | 25.0% |
| ! | AGAGCATATCAATATTGTTT+GGG | - | chr5.4:1045091-1045110 | None:intergenic | 25.0% |
| ! | ATAAGAATGCATTAGGTTTA+AGG | - | chr5.4:1043867-1043886 | None:intergenic | 25.0% |
| ! | ATAAGTTCCAAGATATCAAA+TGG | - | chr5.4:1044256-1044275 | None:intergenic | 25.0% |
| ! | ATACAAATTCTAGTCAACAA+AGG | - | chr5.4:1044649-1044668 | None:intergenic | 25.0% |
| ! | ATAGTAAAGAAACCTTTATC+AGG | - | chr5.4:1040533-1040552 | None:intergenic | 25.0% |
| ! | ATTCATATTCTCCATGAAAA+TGG | - | chr5.4:1045896-1045915 | None:intergenic | 25.0% |
| ! | CAAAGACATAAAATAGTGAA+TGG | - | chr5.4:1044062-1044081 | None:intergenic | 25.0% |
| ! | CAATTGGATGTTTATCAATT+TGG | - | chr5.4:1046326-1046345 | None:intergenic | 25.0% |
| ! | CTGAATAAAGCTTATGATAT+GGG | + | chr5.4:1043177-1043196 | MS.gene40079:intron | 25.0% |
| ! | GAGACAATATATGAACAATA+GGG | + | chr5.4:1045772-1045791 | MS.gene40079:intron | 25.0% |
| ! | GTAGTTGCAGAAAATTATAA+AGG | + | chr5.4:1041563-1041582 | MS.gene40079:intron | 25.0% |
| ! | TAAGAATGCATTAGGTTTAA+GGG | - | chr5.4:1043866-1043885 | None:intergenic | 25.0% |
| ! | TAAGTTCCAAGATATCAAAT+GGG | - | chr5.4:1044255-1044274 | None:intergenic | 25.0% |
| ! | TACTTATTTGCATGATTGAA+AGG | - | chr5.4:1042276-1042295 | None:intergenic | 25.0% |
| ! | TATAAACCCATTTGATATCT+TGG | + | chr5.4:1044246-1044265 | MS.gene40079:intron | 25.0% |
| ! | TATTCTGTTATGATCATATG+TGG | + | chr5.4:1044421-1044440 | MS.gene40079:intron | 25.0% |
| ! | TATTGTTCATATATTGTCTC+CGG | - | chr5.4:1045772-1045791 | None:intergenic | 25.0% |
| ! | TATTTCATGCCTTAATTCTT+TGG | + | chr5.4:1041650-1041669 | MS.gene40079:intron | 25.0% |
| ! | TCACCAACTATTATAACTTT+GGG | + | chr5.4:1041364-1041383 | MS.gene40079:intron | 25.0% |
| ! | TCCAATATGTATTTCGTAAA+TGG | - | chr5.4:1044916-1044935 | None:intergenic | 25.0% |
| ! | TCTTAGGAAATTACATTCAA+TGG | - | chr5.4:1044337-1044356 | None:intergenic | 25.0% |
| ! | TTCACCAACTATTATAACTT+TGG | + | chr5.4:1041363-1041382 | MS.gene40079:intron | 25.0% |
| ! | TTCCAATATCAAAAAACTGT+AGG | - | chr5.4:1043776-1043795 | None:intergenic | 25.0% |
| ! | TTGTGTGTATAAAATGATCA+AGG | + | chr5.4:1042881-1042900 | MS.gene40079:CDS | 25.0% |
| ! | TTTCCCAAAGTTATAATAGT+TGG | - | chr5.4:1041370-1041389 | None:intergenic | 25.0% |
| !! | AACTATTATAACTTTGGGAA+AGG | + | chr5.4:1041369-1041388 | MS.gene40079:intron | 25.0% |
| !! | AAGAGCATATCAATATTGTT+TGG | - | chr5.4:1045092-1045111 | None:intergenic | 25.0% |
| !! | ACTTTGTCCTAATTTTTGTT+AGG | - | chr5.4:1043278-1043297 | None:intergenic | 25.0% |
| !! | ATTGTTTAGAATTCAACTCA+AGG | + | chr5.4:1046023-1046042 | MS.gene40079:intron | 25.0% |
| !! | CTGATAATGTGTTTCAATAT+AGG | + | chr5.4:1043710-1043729 | MS.gene40079:intron | 25.0% |
| !! | CTTTGTCCTAATTTTTGTTA+GGG | - | chr5.4:1043277-1043296 | None:intergenic | 25.0% |
| !! | GTTTCCTTTTTATCAAAATG+GGG | + | chr5.4:1042245-1042264 | MS.gene40079:intron | 25.0% |
| !! | TCTTTTATCAAACGTATTGT+TGG | + | chr5.4:1041055-1041074 | MS.gene40079:CDS | 25.0% |
| !! | TTTATTCCTTTCTTGTTTAC+TGG | + | chr5.4:1045595-1045614 | MS.gene40079:intron | 25.0% |
| !! | TTTGTTGACTAGAATTTGTA+TGG | + | chr5.4:1044648-1044667 | MS.gene40079:intron | 25.0% |
| !!! | ACAGTTTTTTGTGATGATAT+CGG | - | chr5.4:1042599-1042618 | None:intergenic | 25.0% |
| !!! | ACATGATTTGTTTTTACTAC+TGG | + | chr5.4:1042351-1042370 | MS.gene40079:intron | 25.0% |
| !!! | ATGGCTTTTTCAAGAATAAA+AGG | - | chr5.4:1041130-1041149 | None:intergenic | 25.0% |
| !!! | ATTATCATTACAGAGGTATT+GGG | + | chr5.4:1046198-1046217 | MS.gene40079:CDS | 25.0% |
| !!! | ATTTTTAGTTTAGCATCAGT+CGG | - | chr5.4:1043058-1043077 | None:intergenic | 25.0% |
| !!! | CTTGTTATTTTTCAACTTGA+CGG | - | chr5.4:1045311-1045330 | None:intergenic | 25.0% |
| !!! | TAGCAGCAATAGTATTTTAA+TGG | + | chr5.4:1043492-1043511 | MS.gene40079:intron | 25.0% |
| !!! | TATATTTCCTTGCTATTCAT+CGG | + | chr5.4:1044724-1044743 | MS.gene40079:CDS | 25.0% |
| !!! | TGGAATTTTTTGCTCAAATT+GGG | + | chr5.4:1042316-1042335 | MS.gene40079:intron | 25.0% |
| !!! | TGTAAAGCCATTTTCTTTAT+AGG | + | chr5.4:1040957-1040976 | MS.gene40079:intron | 25.0% |
| !!! | TGTGTTGATTGATTCAAATT+TGG | + | chr5.4:1046087-1046106 | MS.gene40079:intron | 25.0% |
| !!! | TTCCTACAGTTTTTTGATAT+TGG | + | chr5.4:1043771-1043790 | MS.gene40079:CDS | 25.0% |
| !!! | TTGGAATTTTTTGCTCAAAT+TGG | + | chr5.4:1042315-1042334 | MS.gene40079:intron | 25.0% |
| !!! | TTTTTTTATCTTTTGCCACT+CGG | + | chr5.4:1040797-1040816 | MS.gene40079:intron | 25.0% |
| AACACACTTATACCTGTATT+CGG | - | chr5.4:1045524-1045543 | None:intergenic | 30.0% | |
| AACTCTTTGACTCATTACAA+TGG | + | chr5.4:1041725-1041744 | MS.gene40079:intron | 30.0% | |
| AAGGAACTGAACTTGATTAA+TGG | + | chr5.4:1041501-1041520 | MS.gene40079:intron | 30.0% | |
| AAGTATATTACCGTGTTGAA+AGG | + | chr5.4:1043426-1043445 | MS.gene40079:intron | 30.0% | |
| AATGAGTCAAAGAGTTGAAA+AGG | - | chr5.4:1041721-1041740 | None:intergenic | 30.0% | |
| ACAGTTCCCTAACAAAAATT+AGG | + | chr5.4:1043268-1043287 | MS.gene40079:intron | 30.0% | |
| ACTCTTTGACTCATTACAAT+GGG | + | chr5.4:1041726-1041745 | MS.gene40079:intron | 30.0% | |
| AGGAACTGAACTTGATTAAT+GGG | + | chr5.4:1041502-1041521 | MS.gene40079:intron | 30.0% | |
| AGTACATGTGATAAGTAACT+AGG | - | chr5.4:1044462-1044481 | None:intergenic | 30.0% | |
| ATAGTTTGGATAAACATCCT+AGG | + | chr5.4:1046127-1046146 | MS.gene40079:intron | 30.0% | |
| ATGAAAATGAACCAAACTTC+TGG | - | chr5.4:1043312-1043331 | None:intergenic | 30.0% | |
| ATGAGATTCAGACTAAAAGA+TGG | - | chr5.4:1043670-1043689 | None:intergenic | 30.0% | |
| ATGAGTCAAAGAGTTGAAAA+GGG | - | chr5.4:1041720-1041739 | None:intergenic | 30.0% | |
| ATTCCAATCATACTGAAACA+TGG | - | chr5.4:1042302-1042321 | None:intergenic | 30.0% | |
| ATTCTAGTCAACAAAGGAAA+AGG | - | chr5.4:1044643-1044662 | None:intergenic | 30.0% | |
| ATTTCTGTAGCTTCTATATG+AGG | + | chr5.4:1041903-1041922 | MS.gene40079:intron | 30.0% | |
| CAAACTAATGTTTGTAATGG+TGG | + | chr5.4:1042966-1042985 | MS.gene40079:intron | 30.0% | |
| CAAGTTCAATCACATTAAGA+TGG | - | chr5.4:1042728-1042747 | None:intergenic | 30.0% | |
| CAATCTAGGAAATTTGAATG+TGG | - | chr5.4:1041697-1041716 | None:intergenic | 30.0% | |
| CATCTTAATGTGATTGAACT+TGG | + | chr5.4:1042726-1042745 | MS.gene40079:intron | 30.0% | |
| CATTATTTCAGTGGTGATAA+GGG | - | chr5.4:1045244-1045263 | None:intergenic | 30.0% | |
| CCTGAATAAAGCTTATGATA+TGG | + | chr5.4:1043176-1043195 | MS.gene40079:intron | 30.0% | |
| CTTGTTTACTGAAGAATGTA+AGG | + | chr5.4:1044142-1044161 | MS.gene40079:intron | 30.0% | |
| GAAAATTATTCTCGCTCAAA+TGG | + | chr5.4:1040739-1040758 | MS.gene40079:CDS | 30.0% | |
| GAGTGGCAAAAGATAAAAAA+AGG | - | chr5.4:1040798-1040817 | None:intergenic | 30.0% | |
| GATATCATCACAAAAAACTG+TGG | + | chr5.4:1042598-1042617 | MS.gene40079:intron | 30.0% | |
| GATCAACAAAAAGTGAACAA+AGG | - | chr5.4:1044179-1044198 | None:intergenic | 30.0% | |
| GCAAAAAACCAACTAACTAA+AGG | + | chr5.4:1041870-1041889 | MS.gene40079:intron | 30.0% | |
| GGACAAACTAATGTTTGTAA+TGG | + | chr5.4:1042963-1042982 | MS.gene40079:intron | 30.0% | |
| GGACTCTTATAAATAAGAGA+AGG | - | chr5.4:1041676-1041695 | None:intergenic | 30.0% | |
| GGAGACAATATATGAACAAT+AGG | + | chr5.4:1045771-1045790 | MS.gene40079:intron | 30.0% | |
| GTACATGTGATAAGTAACTA+GGG | - | chr5.4:1044461-1044480 | None:intergenic | 30.0% | |
| GTATTAACTAGAAATTGAGC+AGG | + | chr5.4:1041402-1041421 | MS.gene40079:intron | 30.0% | |
| GTGTAGGAATAGTTATAGTT+TGG | + | chr5.4:1046113-1046132 | MS.gene40079:intron | 30.0% | |
| GTTGAATGTGAAGATATCAA+AGG | + | chr5.4:1042483-1042502 | MS.gene40079:intron | 30.0% | |
| TAAACAAAAACTGTGTACTG+AGG | + | chr5.4:1041219-1041238 | MS.gene40079:intron | 30.0% | |
| TAATAGAGATCTCAGTACAA+TGG | - | chr5.4:1044219-1044238 | None:intergenic | 30.0% | |
| TAATGTGTTTCAATATAGGC+TGG | + | chr5.4:1043714-1043733 | MS.gene40079:intron | 30.0% | |
| TAGTGGTTTATGTGTTTAGT+TGG | + | chr5.4:1041308-1041327 | MS.gene40079:intron | 30.0% | |
| TATACTTATCATCCTTGTCA+CGG | - | chr5.4:1043751-1043770 | None:intergenic | 30.0% | |
| TATCATTACACCCATCAATA+AGG | - | chr5.4:1041468-1041487 | None:intergenic | 30.0% | |
| TATGCTAGATTAAGGTTTCT+TGG | + | chr5.4:1042942-1042961 | MS.gene40079:intron | 30.0% | |
| TATTGGATATTCAGAGAGAT+TGG | + | chr5.4:1042201-1042220 | MS.gene40079:intron | 30.0% | |
| TATTTCTTGGATAGTTGCTA+AGG | + | chr5.4:1044854-1044873 | MS.gene40079:intron | 30.0% | |
| TCGTGTGAAACTTTCTTATT+TGG | + | chr5.4:1044383-1044402 | MS.gene40079:intron | 30.0% | |
| TGAAAATGAACCAAACTTCT+GGG | - | chr5.4:1043311-1043330 | None:intergenic | 30.0% | |
| TTACCATGTTTCAGTATGAT+TGG | + | chr5.4:1042296-1042315 | MS.gene40079:intron | 30.0% | |
| TTGCATTGTAGAATAGATGA+TGG | + | chr5.4:1043831-1043850 | MS.gene40079:intron | 30.0% | |
| TTTCTTTACTATGCCTCAAT+TGG | + | chr5.4:1040541-1040560 | MS.gene40079:CDS | 30.0% | |
| ! | AAAAGGATTGCCTTATTGAT+GGG | + | chr5.4:1041455-1041474 | MS.gene40079:intron | 30.0% |
| ! | AAAGCACCACATATAAACTA+GGG | - | chr5.4:1044562-1044581 | None:intergenic | 30.0% |
| ! | AATAACGCTTGAGTTTTTCA+AGG | + | chr5.4:1041333-1041352 | MS.gene40079:intron | 30.0% |
| ! | ACAAGTTTGAGTTATGGAAT+CGG | + | chr5.4:1042066-1042085 | MS.gene40079:intron | 30.0% |
| ! | AGCTTTTCGTTAGGTATAAA+TGG | + | chr5.4:1042994-1043013 | MS.gene40079:intron | 30.0% |
| ! | ATACAGGTATAAGTGTGTTT+TGG | + | chr5.4:1045525-1045544 | MS.gene40079:intron | 30.0% |
| ! | ATCAATATTGTTTGGGACTT+GGG | - | chr5.4:1045084-1045103 | None:intergenic | 30.0% |
| ! | ATTCTTTTGTATATCATCCC+AGG | - | chr5.4:1044965-1044984 | None:intergenic | 30.0% |
| ! | GATGATTTGCATTTATGTAG+TGG | + | chr5.4:1041291-1041310 | MS.gene40079:intron | 30.0% |
| ! | GATTATCATTACAGAGGTAT+TGG | + | chr5.4:1046197-1046216 | MS.gene40079:CDS | 30.0% |
| ! | TATCAATATTGTTTGGGACT+TGG | - | chr5.4:1045085-1045104 | None:intergenic | 30.0% |
| ! | TTCAGTATTTCTGATTTAGC+AGG | - | chr5.4:1045721-1045740 | None:intergenic | 30.0% |
| !! | CCATATCATAAGCTTTATTC+AGG | - | chr5.4:1043179-1043198 | None:intergenic | 30.0% |
| !! | CGTCAAGTTGAAAAATAACA+AGG | + | chr5.4:1045309-1045328 | MS.gene40079:intron | 30.0% |
| !! | TCCAATTTGACTTTTATCAC+CGG | + | chr5.4:1046229-1046248 | MS.gene40079:CDS | 30.0% |
| !!! | CAAGATTTGTTTTGACAGAA+TGG | + | chr5.4:1045826-1045845 | MS.gene40079:intron | 30.0% |
| !!! | CTTTTTTGTTGCTTTGTATG+AGG | + | chr5.4:1044100-1044119 | MS.gene40079:intron | 30.0% |
| !!! | GAATTTTTTGCTCAAATTGG+GGG | + | chr5.4:1042318-1042337 | MS.gene40079:intron | 30.0% |
| !!! | GGAATTTTTTGCTCAAATTG+GGG | + | chr5.4:1042317-1042336 | MS.gene40079:intron | 30.0% |
| !!! | TTTTTTGCTGTTTCAAGAGT+TGG | + | chr5.4:1045403-1045422 | MS.gene40079:CDS | 30.0% |
| AAATGTCCACTTTGACAGAA+TGG | + | chr5.4:1045194-1045213 | MS.gene40079:intron | 35.0% | |
| AACTAGAAATTGAGCAGGAA+GGG | + | chr5.4:1041407-1041426 | MS.gene40079:intron | 35.0% | |
| AAGAAACCTTTATCAGGTGA+TGG | - | chr5.4:1040527-1040546 | None:intergenic | 35.0% | |
| AAGAGAAGGCCAAAGAATTA+AGG | - | chr5.4:1041662-1041681 | None:intergenic | 35.0% | |
| AATAGTTTCTGTTGAGTGGA+TGG | - | chr5.4:1045577-1045596 | None:intergenic | 35.0% | |
| AATGCGCAGATAGTAAAAGT+AGG | - | chr5.4:1046293-1046312 | None:intergenic | 35.0% | |
| ACCGGTGATAAAAGTCAAAT+TGG | - | chr5.4:1046233-1046252 | None:intergenic | 35.0% | |
| AGATAAATGCTGATCATCCT+AGG | - | chr5.4:1046147-1046166 | None:intergenic | 35.0% | |
| ATAATGAAGTTGACTGCCTA+AGG | - | chr5.4:1044515-1044534 | None:intergenic | 35.0% | |
| ATACTTATCATCCTTGTCAC+GGG | - | chr5.4:1043750-1043769 | None:intergenic | 35.0% | |
| ATGAGCTGACGTTATTAAGT+GGG | + | chr5.4:1043939-1043958 | MS.gene40079:intron | 35.0% | |
| ATGCGCAGATAGTAAAAGTA+GGG | - | chr5.4:1046292-1046311 | None:intergenic | 35.0% | |
| ATGTGAAGATATCAAAGGCA+TGG | + | chr5.4:1042488-1042507 | MS.gene40079:intron | 35.0% | |
| ATTATTCCTTTATCCATGCC+AGG | - | chr5.4:1045022-1045041 | None:intergenic | 35.0% | |
| ATTTGCATGATTGAAAGGGA+CGG | - | chr5.4:1042271-1042290 | None:intergenic | 35.0% | |
| CAAATATTGCATCAAACCAC+CGG | - | chr5.4:1046251-1046270 | None:intergenic | 35.0% | |
| CAATCACATTAAGATGGAGT+TGG | - | chr5.4:1042722-1042741 | None:intergenic | 35.0% | |
| CACATGAAAGTAACTGCTAA+AGG | - | chr5.4:1042035-1042054 | None:intergenic | 35.0% | |
| CAGATAGTAAAAGTAGGGAA+AGG | - | chr5.4:1046287-1046306 | None:intergenic | 35.0% | |
| CATCTATTCTACAATGCAAC+TGG | - | chr5.4:1043830-1043849 | None:intergenic | 35.0% | |
| CCATTATTTCAGTGGTGATA+AGG | - | chr5.4:1045245-1045264 | None:intergenic | 35.0% | |
| CCTTATCACCACTGAAATAA+TGG | + | chr5.4:1045242-1045261 | MS.gene40079:intron | 35.0% | |
| CGAGAGAAAAGTGAAACATA+AGG | + | chr5.4:1045864-1045883 | MS.gene40079:intron | 35.0% | |
| CTAATGCACAGATTACTAGT+AGG | - | chr5.4:1045655-1045674 | None:intergenic | 35.0% | |
| CTTTGCAATGACTGCAAAAA+AGG | - | chr5.4:1043579-1043598 | None:intergenic | 35.0% | |
| GAAAATGGTTTCAACTATGC+AGG | + | chr5.4:1042788-1042807 | MS.gene40079:intron | 35.0% | |
| GAAATTCTCGCAGAAACAAA+AGG | + | chr5.4:1041438-1041457 | MS.gene40079:intron | 35.0% | |
| GAACAGGAACACAAAGTAAA+AGG | - | chr5.4:1040992-1041011 | None:intergenic | 35.0% | |
| GACACTAACCTGAGATAATA+AGG | - | chr5.4:1043808-1043827 | None:intergenic | 35.0% | |
| GAGTAGACAATTTACATTCC+TGG | + | chr5.4:1045001-1045020 | MS.gene40079:intron | 35.0% | |
| GCATGTGTCCTAAATTGATT+AGG | + | chr5.4:1043985-1044004 | MS.gene40079:intron | 35.0% | |
| GCTTTCAAAGCAATTGTTCT+TGG | + | chr5.4:1042536-1042555 | MS.gene40079:CDS | 35.0% | |
| GGAACTGAACTTGATTAATG+GGG | + | chr5.4:1041503-1041522 | MS.gene40079:intron | 35.0% | |
| GTGGTTTGATGCAATATTTG+TGG | + | chr5.4:1046251-1046270 | MS.gene40079:CDS | 35.0% | |
| GTTGGAAAATAACTCAGTCT+TGG | - | chr5.4:1041794-1041813 | None:intergenic | 35.0% | |
| TAACTAGAAATTGAGCAGGA+AGG | + | chr5.4:1041406-1041425 | MS.gene40079:intron | 35.0% | |
| TAGACATGCCTTTAGTTAGT+TGG | - | chr5.4:1041881-1041900 | None:intergenic | 35.0% | |
| TATGAGCTGACGTTATTAAG+TGG | + | chr5.4:1043938-1043957 | MS.gene40079:intron | 35.0% | |
| TATTTCGTAAATGGTTACGC+TGG | - | chr5.4:1044907-1044926 | None:intergenic | 35.0% | |
| TCAGGTTCAGATTTATGAGT+TGG | - | chr5.4:1043161-1043180 | None:intergenic | 35.0% | |
| TCTAGTGTGACACTCATAAT+AGG | + | chr5.4:1043396-1043415 | MS.gene40079:intron | 35.0% | |
| TCTGATCTGAATTCATTGAC+AGG | + | chr5.4:1046175-1046194 | MS.gene40079:intron | 35.0% | |
| TGACAGGATTATCATTACAG+AGG | + | chr5.4:1046191-1046210 | MS.gene40079:intron | 35.0% | |
| TTCGTTAGGTATAAATGGCT+CGG | + | chr5.4:1042999-1043018 | MS.gene40079:intron | 35.0% | |
| TTTGCTCGTCAGTTAGTAAA+CGG | - | chr5.4:1041855-1041874 | None:intergenic | 35.0% | |
| ! | CAAAAGGATTGCCTTATTGA+TGG | + | chr5.4:1041454-1041473 | MS.gene40079:intron | 35.0% |
| ! | CAGATTTATGAGTTGGAACT+TGG | - | chr5.4:1043154-1043173 | None:intergenic | 35.0% |
| ! | GCGTTGACCTTTAAAAAAAC+TGG | + | chr5.4:1042620-1042639 | MS.gene40079:intron | 35.0% |
| ! | TGTTCATATTTTCAGCCACA+TGG | - | chr5.4:1043225-1043244 | None:intergenic | 35.0% |
| ! | TTTCAGCCACATGGATATTT+TGG | - | chr5.4:1043216-1043235 | None:intergenic | 35.0% |
| !! | AAATGCAGCCTTATTATCTC+AGG | + | chr5.4:1043797-1043816 | MS.gene40079:CDS | 35.0% |
| !! | AACAAAAGGCTTTGAAGTTG+GGG | + | chr5.4:1042000-1042019 | MS.gene40079:intron | 35.0% |
| !! | AATTTGACTTTTATCACCGG+TGG | + | chr5.4:1046232-1046251 | MS.gene40079:CDS | 35.0% |
| !! | CAACAAAAGGCTTTGAAGTT+GGG | + | chr5.4:1041999-1042018 | MS.gene40079:intron | 35.0% |
| !! | GAAAGCACCACATATAAACT+AGG | - | chr5.4:1044563-1044582 | None:intergenic | 35.0% |
| !! | GGCATTTTCGATCTTTTTTG+TGG | + | chr5.4:1044875-1044894 | MS.gene40079:intron | 35.0% |
| !! | TTCAAAGCCTTTTGTTGCTT+TGG | - | chr5.4:1041996-1042015 | None:intergenic | 35.0% |
| !!! | CTGTTTTTGTCCGAGATAAT+GGG | + | chr5.4:1045451-1045470 | MS.gene40079:CDS | 35.0% |
| !!! | GCAAAGTGTTGTTTTCAAAC+AGG | + | chr5.4:1043593-1043612 | MS.gene40079:CDS | 35.0% |
| !!! | TAAGGTTGTTGCCATTTTCA+TGG | + | chr5.4:1045882-1045901 | MS.gene40079:intron | 35.0% |
| !!! | TCTGTTTTTGTCCGAGATAA+TGG | + | chr5.4:1045450-1045469 | MS.gene40079:CDS | 35.0% |
| AAACAACCAGACTCTTGCTT+CGG | - | chr5.4:1046059-1046078 | None:intergenic | 40.0% | |
| AAACTTGTGCTATCCAGTCA+TGG | - | chr5.4:1042170-1042189 | None:intergenic | 40.0% | |
| AAAGCTTAGCAACCGAATAC+AGG | + | chr5.4:1045509-1045528 | MS.gene40079:CDS | 40.0% | |
| ACTATGTTGTGACACCTGTA+CGG | + | chr5.4:1043463-1043482 | MS.gene40079:intron | 40.0% | |
| ACTCTTCATCAGAGAGATTG+AGG | + | chr5.4:1040649-1040668 | MS.gene40079:CDS | 40.0% | |
| AGAGTTGAAAAGGGCAATCT+AGG | - | chr5.4:1041711-1041730 | None:intergenic | 40.0% | |
| AGATTGTCTAGTACCAGAAG+AGG | - | chr5.4:1045060-1045079 | None:intergenic | 40.0% | |
| AGCTCTCCCTAGTTTATATG+TGG | + | chr5.4:1044553-1044572 | MS.gene40079:intron | 40.0% | |
| AGGAGAGTAACAGAAGACTA+TGG | - | chr5.4:1044603-1044622 | None:intergenic | 40.0% | |
| AGGCAGAATAAGTAGACAGT+TGG | - | chr5.4:1041812-1041831 | None:intergenic | 40.0% | |
| AGGTGTATGAGAGAAGAACT+AGG | - | chr5.4:1044623-1044642 | None:intergenic | 40.0% | |
| AGGTTGCCTACAATAACTCA+TGG | + | chr5.4:1042109-1042128 | MS.gene40079:intron | 40.0% | |
| AGTTCAGATGAAGCTAGAAC+AGG | - | chr5.4:1041008-1041027 | None:intergenic | 40.0% | |
| ATGAGCTCCAAAGCAACAAA+AGG | + | chr5.4:1041986-1042005 | MS.gene40079:intron | 40.0% | |
| CAAAAACAGAACAACGTTGC+TGG | - | chr5.4:1045440-1045459 | None:intergenic | 40.0% | |
| CAACATTCCGATGAATAGCA+AGG | - | chr5.4:1044734-1044753 | None:intergenic | 40.0% | |
| CCAAAGCCAGTAAACAAGAA+AGG | - | chr5.4:1045604-1045623 | None:intergenic | 40.0% | |
| CCAATTCTACTGACCAATTG+AGG | - | chr5.4:1040557-1040576 | None:intergenic | 40.0% | |
| CCTCAATTGGTCAGTAGAAT+TGG | + | chr5.4:1040554-1040573 | MS.gene40079:CDS | 40.0% | |
| CCTCTTGTAAATGCAAGACA+AGG | + | chr5.4:1042089-1042108 | MS.gene40079:intron | 40.0% | |
| CCTTGTCTTGCATTTACAAG+AGG | - | chr5.4:1042092-1042111 | None:intergenic | 40.0% | |
| CTCAACTGAACCTTTCAACA+CGG | - | chr5.4:1043439-1043458 | None:intergenic | 40.0% | |
| CTGCATAAGTTGTCTTTCCA+AGG | - | chr5.4:1040690-1040709 | None:intergenic | 40.0% | |
| CTTATGCAGTCAATTGAGAC+TGG | + | chr5.4:1040701-1040720 | MS.gene40079:CDS | 40.0% | |
| GACAATTTACATTCCTGGCA+TGG | + | chr5.4:1045006-1045025 | MS.gene40079:intron | 40.0% | |
| GATTCAAATTTGGCACGTGT+AGG | + | chr5.4:1046097-1046116 | MS.gene40079:intron | 40.0% | |
| GATTGAGGAAACTGAGATCA+AGG | + | chr5.4:1040664-1040683 | MS.gene40079:CDS | 40.0% | |
| GCATATTCTCGAACTTGGAA+AGG | + | chr5.4:1042819-1042838 | MS.gene40079:CDS | 40.0% | |
| GCGCAATTAGTTCACAAACA+TGG | + | chr5.4:1045629-1045648 | MS.gene40079:intron | 40.0% | |
| GCTGAATTTGCATACAACCT+GGG | + | chr5.4:1044945-1044964 | MS.gene40079:intron | 40.0% | |
| GGACATATGCAGAATCTACT+AGG | + | chr5.4:1042840-1042859 | MS.gene40079:CDS | 40.0% | |
| GTGTGACACTCATAATAGGA+CGG | + | chr5.4:1043400-1043419 | MS.gene40079:intron | 40.0% | |
| GTGTGCTTGATATTTACCTG+TGG | + | chr5.4:1045746-1045765 | MS.gene40079:intron | 40.0% | |
| GTTAGGAGGTGACTATAGAT+AGG | - | chr5.4:1041832-1041851 | None:intergenic | 40.0% | |
| TACATTCCTGGCATGGATAA+AGG | + | chr5.4:1045013-1045032 | MS.gene40079:intron | 40.0% | |
| TATGAACAATAGGGTGAGAG+AGG | + | chr5.4:1045781-1045800 | MS.gene40079:intron | 40.0% | |
| TATTCTCGCTCAAATGGAGA+TGG | + | chr5.4:1040745-1040764 | MS.gene40079:CDS | 40.0% | |
| TCAGTCGGCAAATAGATTGT+TGG | - | chr5.4:1043043-1043062 | None:intergenic | 40.0% | |
| TGACTCATTACAATGGGTCT+CGG | + | chr5.4:1041732-1041751 | MS.gene40079:intron | 40.0% | |
| TGTAGCTTCTATATGAGGCT+TGG | + | chr5.4:1041908-1041927 | MS.gene40079:intron | 40.0% | |
| TGTAGGCCATGAGTTATTGT+AGG | - | chr5.4:1042118-1042137 | None:intergenic | 40.0% | |
| TTCGATGGCCATTATTTCAG+TGG | - | chr5.4:1045253-1045272 | None:intergenic | 40.0% | |
| TTCTGATTTAGCAGGATTGC+TGG | - | chr5.4:1045713-1045732 | None:intergenic | 40.0% | |
| TTGCTCGTCAGTTAGTAAAC+GGG | - | chr5.4:1041854-1041873 | None:intergenic | 40.0% | |
| ! | GAGGTCACAAGTTTGAGTTA+TGG | + | chr5.4:1042060-1042079 | MS.gene40079:intron | 40.0% |
| !! | ACGGCCCCATTTTGATAAAA+AGG | - | chr5.4:1042252-1042271 | None:intergenic | 40.0% |
| !! | AGTACAATGGCTCTGATTAG+TGG | - | chr5.4:1044206-1044225 | None:intergenic | 40.0% |
| !! | ATCATTACAGAGGTATTGGG+CGG | + | chr5.4:1046201-1046220 | MS.gene40079:CDS | 40.0% |
| !! | ATGGCTGTTCTATCTGGTTT+TGG | + | chr5.4:1040596-1040615 | MS.gene40079:CDS | 40.0% |
| !! | CCTTTCTTGTTTACTGGCTT+TGG | + | chr5.4:1045601-1045620 | MS.gene40079:intron | 40.0% |
| !! | CTTGCTATTCATCGGAATGT+TGG | + | chr5.4:1044732-1044751 | MS.gene40079:CDS | 40.0% |
| !! | GCAACAAAAGGCTTTGAAGT+TGG | + | chr5.4:1041998-1042017 | MS.gene40079:intron | 40.0% |
| !! | GTACAATGGCTCTGATTAGT+GGG | - | chr5.4:1044205-1044224 | None:intergenic | 40.0% |
| !! | GTCAGTAGAATTGGTGTCAT+TGG | + | chr5.4:1040563-1040582 | MS.gene40079:CDS | 40.0% |
| !! | TACAATGGCTCTGATTAGTG+GGG | - | chr5.4:1044204-1044223 | None:intergenic | 40.0% |
| !! | TCTGAACTTGTTTTTCGCAG+AGG | + | chr5.4:1041020-1041039 | MS.gene40079:intron | 40.0% |
| !! | TGTCATTGGTGTTACTGTCA+TGG | + | chr5.4:1040577-1040596 | MS.gene40079:CDS | 40.0% |
| !!! | GAGGCTTGGTTAGTTTTCAT+GGG | + | chr5.4:1041922-1041941 | MS.gene40079:intron | 40.0% |
| !!! | TGAGGCTTGGTTAGTTTTCA+TGG | + | chr5.4:1041921-1041940 | MS.gene40079:intron | 40.0% |
| ACAGATTGCACCCAGAAGTT+TGG | + | chr5.4:1043298-1043317 | MS.gene40079:intron | 45.0% | |
| ACTCAAACTTGTGACCTCCT+AGG | - | chr5.4:1042058-1042077 | None:intergenic | 45.0% | |
| ACTGTCATGGCTGTTCTATC+TGG | + | chr5.4:1040590-1040609 | MS.gene40079:CDS | 45.0% | |
| AGGGTAGCATCTCACAATAG+AGG | - | chr5.4:1045225-1045244 | None:intergenic | 45.0% | |
| ATGGAGATGGAGAACAAGCA+AGG | + | chr5.4:1040758-1040777 | MS.gene40079:CDS | 45.0% | |
| ATTGAGCAGGAAGGGAAGAA+AGG | + | chr5.4:1041415-1041434 | MS.gene40079:intron | 45.0% | |
| CGTGTTGAAAGGTTCAGTTG+AGG | + | chr5.4:1043437-1043456 | MS.gene40079:intron | 45.0% | |
| CTATGAGCTTCGACAAGCAA+AGG | + | chr5.4:1042563-1042582 | MS.gene40079:CDS | 45.0% | |
| CTGCTGCATATTCTCGAACT+TGG | + | chr5.4:1042814-1042833 | MS.gene40079:CDS | 45.0% | |
| GAAACTAACCTTGCTCCTTC+TGG | - | chr5.4:1041108-1041127 | None:intergenic | 45.0% | |
| GAACAAGCAAGGATCTGAAG+AGG | + | chr5.4:1040769-1040788 | MS.gene40079:CDS | 45.0% | |
| GCTTGATATTTACCTGTGGC+CGG | + | chr5.4:1045750-1045769 | MS.gene40079:intron | 45.0% | |
| GGCTGAATTTGCATACAACC+TGG | + | chr5.4:1044944-1044963 | MS.gene40079:intron | 45.0% | |
| GTTCTGCCATTCTGTCAAAG+TGG | - | chr5.4:1045203-1045222 | None:intergenic | 45.0% | |
| TGACACTCATAATAGGACGG+AGG | + | chr5.4:1043403-1043422 | MS.gene40079:intron | 45.0% | |
| TGCTGCTAATATCACCGTAC+AGG | - | chr5.4:1043480-1043499 | None:intergenic | 45.0% | |
| TTACAATGGGTCTCGGTCAA+TGG | + | chr5.4:1041739-1041758 | MS.gene40079:intron | 45.0% | |
| TTGAGCAGGAAGGGAAGAAA+GGG | + | chr5.4:1041416-1041435 | MS.gene40079:intron | 45.0% | |
| TTGGTTGTGATATCAGTGCG+TGG | + | chr5.4:1044751-1044770 | MS.gene40079:CDS | 45.0% | |
| TTGTGCTATCCAGTCATGGT+GGG | - | chr5.4:1042166-1042185 | None:intergenic | 45.0% | |
| ! | AATGGCTCGGAAGCAAAGTA+TGG | + | chr5.4:1043012-1043031 | MS.gene40079:intron | 45.0% |
| ! | CGTCAGTTAGTAAACGGGTT+AGG | - | chr5.4:1041849-1041868 | None:intergenic | 45.0% |
| ! | GCAGTTACTTTCATGTGCCT+AGG | + | chr5.4:1042038-1042057 | MS.gene40079:intron | 45.0% |
| ! | GCTGTTTCAAGAGTTGGAAG+TGG | + | chr5.4:1045409-1045428 | MS.gene40079:CDS | 45.0% |
| ! | GTTACTTTCATGTGCCTAGG+AGG | + | chr5.4:1042041-1042060 | MS.gene40079:intron | 45.0% |
| ! | TATCAAAGGCATGGAAGCAG+AGG | + | chr5.4:1042497-1042516 | MS.gene40079:CDS | 45.0% |
| ! | TCTAAAGCAGGCGCTTCAAA+TGG | - | chr5.4:1041149-1041168 | None:intergenic | 45.0% |
| ! | TTTGCCACTCGGCATGTTTT+TGG | + | chr5.4:1040808-1040827 | MS.gene40079:intron | 45.0% |
| ! | TTTGGAGCTCATACTGTAGC+GGG | - | chr5.4:1041978-1041997 | None:intergenic | 45.0% |
| !! | CAGTTAGTAAACGGGTTAGG+AGG | - | chr5.4:1041846-1041865 | None:intergenic | 45.0% |
| !! | CTTTGGAGCTCATACTGTAG+CGG | - | chr5.4:1041979-1041998 | None:intergenic | 45.0% |
| !! | GCTGGAAAGTTGATGTTCGA+TGG | - | chr5.4:1045268-1045287 | None:intergenic | 45.0% |
| !!! | GTGGACTAGAGCTTTTCGTT+AGG | + | chr5.4:1042985-1043004 | MS.gene40079:intron | 45.0% |
| !!! | TACAAATTTTTTAATTTTTT+TGG | + | chr5.4:1042461-1042480 | MS.gene40079:intron | 5.0% |
| AGCAAACCGAAGCAAGAGTC+TGG | + | chr5.4:1046050-1046069 | MS.gene40079:intron | 50.0% | |
| AGTTGTTCGATCCGTGCAAG+AGG | + | chr5.4:1041081-1041100 | MS.gene40079:CDS | 50.0% | |
| CATATATTGTCTCCGGCCAC+AGG | - | chr5.4:1045765-1045784 | None:intergenic | 50.0% | |
| CTTGTGCTATCCAGTCATGG+TGG | - | chr5.4:1042167-1042186 | None:intergenic | 50.0% | |
| GAAGGGTCGGACATATCTGT+AGG | - | chr5.4:1042135-1042154 | None:intergenic | 50.0% | |
| GAGTCCAAAAACATGCCGAG+TGG | - | chr5.4:1040815-1040834 | None:intergenic | 50.0% | |
| GGAAACTGAGATCAAGGCCT+TGG | + | chr5.4:1040670-1040689 | MS.gene40079:CDS | 50.0% | |
| GTTCAGTTGATCCCGTGACA+AGG | + | chr5.4:1043736-1043755 | MS.gene40079:CDS | 50.0% | |
| TGGATGGCACTTCGAGAGAT+TGG | - | chr5.4:1045561-1045580 | None:intergenic | 50.0% | |
| ! | CATGGTGGGAGTCTAGAGAA+GGG | - | chr5.4:1042152-1042171 | None:intergenic | 50.0% |
| ! | TCATGGTGGGAGTCTAGAGA+AGG | - | chr5.4:1042153-1042172 | None:intergenic | 50.0% |
| !! | AAGGCTTTGAAGTTGGGGTG+TGG | + | chr5.4:1042005-1042024 | MS.gene40079:intron | 50.0% |
| !! | AATGGCTCTGATTAGTGGGG+AGG | - | chr5.4:1044201-1044220 | None:intergenic | 50.0% |
| !! | AGGCTTTGAAGTTGGGGTGT+GGG | + | chr5.4:1042006-1042025 | MS.gene40079:intron | 50.0% |
| !! | CTCATACTGTAGCGGGTCTA+GGG | - | chr5.4:1041971-1041990 | None:intergenic | 50.0% |
| ATCCGTGCAAGAGGACCAGA+AGG | + | chr5.4:1041090-1041109 | MS.gene40079:CDS | 55.0% | |
| CAAGAGGACCAGAAGGAGCA+AGG | + | chr5.4:1041097-1041116 | MS.gene40079:CDS | 55.0% | |
| CTCCTTCTGGTCCTCTTGCA+CGG | - | chr5.4:1041095-1041114 | None:intergenic | 55.0% | |
| CTCTAGACTCCCACCATGAC+TGG | + | chr5.4:1042154-1042173 | MS.gene40079:intron | 55.0% | |
| GTGGGAGTCTAGAGAAGGGT+CGG | - | chr5.4:1042148-1042167 | None:intergenic | 55.0% | |
| ! | AGGCATGGAAGCAGAGGTAC+TGG | + | chr5.4:1042503-1042522 | MS.gene40079:CDS | 55.0% |
| !! | ACTGTAGCGGGTCTAGGGAA+GGG | - | chr5.4:1041966-1041985 | None:intergenic | 55.0% |
| !! | GCTCATACTGTAGCGGGTCT+AGG | - | chr5.4:1041972-1041991 | None:intergenic | 55.0% |
| !! | GGCTTTGAAGTTGGGGTGTG+GGG | + | chr5.4:1042007-1042026 | MS.gene40079:intron | 55.0% |
| !! | TACTGTAGCGGGTCTAGGGA+AGG | - | chr5.4:1041967-1041986 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 1040521 | 1046348 | 1040521 | ID=MS.gene40079 |
| chr5.4 | mRNA | 1040521 | 1046348 | 1040521 | ID=MS.gene40079.t1;Parent=MS.gene40079 |
| chr5.4 | exon | 1040521 | 1040790 | 1040521 | ID=MS.gene40079.t1.exon1;Parent=MS.gene40079.t1 |
| chr5.4 | CDS | 1040521 | 1040790 | 1040521 | ID=cds.MS.gene40079.t1;Parent=MS.gene40079.t1 |
| chr5.4 | exon | 1041040 | 1041118 | 1041040 | ID=MS.gene40079.t1.exon2;Parent=MS.gene40079.t1 |
| chr5.4 | CDS | 1041040 | 1041118 | 1041040 | ID=cds.MS.gene40079.t1;Parent=MS.gene40079.t1 |
| chr5.4 | exon | 1042496 | 1042584 | 1042496 | ID=MS.gene40079.t1.exon3;Parent=MS.gene40079.t1 |
| chr5.4 | CDS | 1042496 | 1042584 | 1042496 | ID=cds.MS.gene40079.t1;Parent=MS.gene40079.t1 |
| chr5.4 | exon | 1042810 | 1042902 | 1042810 | ID=MS.gene40079.t1.exon4;Parent=MS.gene40079.t1 |
| chr5.4 | CDS | 1042810 | 1042902 | 1042810 | ID=cds.MS.gene40079.t1;Parent=MS.gene40079.t1 |
| chr5.4 | exon | 1043588 | 1043614 | 1043588 | ID=MS.gene40079.t1.exon5;Parent=MS.gene40079.t1 |
| chr5.4 | CDS | 1043588 | 1043614 | 1043588 | ID=cds.MS.gene40079.t1;Parent=MS.gene40079.t1 |
| chr5.4 | exon | 1043732 | 1043818 | 1043732 | ID=MS.gene40079.t1.exon6;Parent=MS.gene40079.t1 |
| chr5.4 | CDS | 1043732 | 1043818 | 1043732 | ID=cds.MS.gene40079.t1;Parent=MS.gene40079.t1 |
| chr5.4 | exon | 1044724 | 1044795 | 1044724 | ID=MS.gene40079.t1.exon7;Parent=MS.gene40079.t1 |
| chr5.4 | CDS | 1044724 | 1044795 | 1044724 | ID=cds.MS.gene40079.t1;Parent=MS.gene40079.t1 |
| chr5.4 | exon | 1045400 | 1045530 | 1045400 | ID=MS.gene40079.t1.exon8;Parent=MS.gene40079.t1 |
| chr5.4 | CDS | 1045400 | 1045530 | 1045400 | ID=cds.MS.gene40079.t1;Parent=MS.gene40079.t1 |
| chr5.4 | exon | 1046197 | 1046348 | 1046197 | ID=MS.gene40079.t1.exon9;Parent=MS.gene40079.t1 |
| chr5.4 | CDS | 1046197 | 1046348 | 1046197 | ID=cds.MS.gene40079.t1;Parent=MS.gene40079.t1 |
| Gene Sequence |
| Protein sequence |
