AlfalfaGEDB | MS.gene069828

M. sativa cultivar XinJiangDaYe / MS.gene069828

KEGG: K03113
GO: GO:0003674 GO:0003676 GO:0003723 GO:0003743 GO:0005488 GO:0006413 GO:0008135 GO:0008150 GO:0008152 GO:0009987 GO:0044237 GO:0045182 GO:0090079 GO:0097159 GO:1901363
PFAM: PF01253.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene069828.t1	KEH38847.1	100	110	0	0	1	110	1	110	1.30E-53	218.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene069828.t1	P41568	88.0	100	11	1	1	100	1	99	3.5e-44	178.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene069828.t1	A0A072VAR8	100.0	110	0	0	1	110	1	110	9.2e-54	218.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049129	MS.gene069828	-0.837034	6.59E-57	-1.69E-46
MS.gene04918	MS.gene069828	0.805982	1.03E-49	-1.69E-46
MS.gene04920	MS.gene069828	0.806196	9.25E-50	-1.69E-46
MS.gene049283	MS.gene069828	0.814613	1.41E-51	-1.69E-46
MS.gene049350	MS.gene069828	0.806778	6.97E-50	-1.69E-46
MS.gene049368	MS.gene069828	0.833278	5.85E-56	-1.69E-46
MS.gene049411	MS.gene069828	0.882329	1.14E-70	-1.69E-46
MS.gene049499	MS.gene069828	0.810055	1.39E-50	-1.69E-46
MS.gene049580	MS.gene069828	0.832015	1.20E-55	-1.69E-46
MS.gene049653	MS.gene069828	0.801546	8.56E-49	-1.69E-46
MS.gene049674	MS.gene069828	0.810825	9.51E-51	-1.69E-46
MS.gene049680	MS.gene069828	0.83341	5.42E-56	-1.69E-46
MS.gene049807	MS.gene069828	0.830748	2.47E-55	-1.69E-46
MS.gene049951	MS.gene069828	0.822221	2.66E-53	-1.69E-46
MS.gene050085	MS.gene069828	0.817286	3.57E-52	-1.69E-46
MS.gene05029	MS.gene069828	0.822362	2.47E-53	-1.69E-46
MS.gene050359	MS.gene069828	0.809766	1.61E-50	-1.69E-46
MS.gene050384	MS.gene069828	0.80951	1.83E-50	-1.69E-46
MS.gene050386	MS.gene069828	0.81527	1.01E-51	-1.69E-46
MS.gene050414	MS.gene069828	0.815545	8.75E-52	-1.69E-46
MS.gene050437	MS.gene069828	0.82414	9.49E-54	-1.69E-46
MS.gene050646	MS.gene069828	0.843562	1.30E-58	-1.69E-46
MS.gene050689	MS.gene069828	0.834808	2.42E-56	-1.69E-46
MS.gene050752	MS.gene069828	0.90107	3.89E-78	-1.69E-46
MS.gene050838	MS.gene069828	0.854421	1.25E-61	-1.69E-46
MS.gene050931	MS.gene069828	0.809134	2.20E-50	-1.69E-46
MS.gene050945	MS.gene069828	0.855798	4.95E-62	-1.69E-46
MS.gene050955	MS.gene069828	0.884893	1.30E-71	-1.69E-46
MS.gene051003	MS.gene069828	0.870544	1.35E-66	-1.69E-46
MS.gene051043	MS.gene069828	0.861333	1.10E-63	-1.69E-46
MS.gene051233	MS.gene069828	0.810615	1.06E-50	-1.69E-46
MS.gene051234	MS.gene069828	0.895764	7.03E-76	-1.69E-46
MS.gene051343	MS.gene069828	0.854005	1.64E-61	-1.69E-46
MS.gene051365	MS.gene069828	0.819	1.46E-52	-1.69E-46
MS.gene051381	MS.gene069828	0.802469	5.53E-49	-1.69E-46
MS.gene051642	MS.gene069828	0.837611	4.69E-57	-1.69E-46
MS.gene051676	MS.gene069828	0.827925	1.20E-54	-1.69E-46
MS.gene051699	MS.gene069828	0.811423	7.05E-51	-1.69E-46
MS.gene051731	MS.gene069828	0.804086	2.56E-49	-1.69E-46
MS.gene051748	MS.gene069828	0.804208	2.41E-49	-1.69E-46
MS.gene051856	MS.gene069828	0.820636	6.18E-53	-1.69E-46
MS.gene051902	MS.gene069828	0.855625	5.57E-62	-1.69E-46
MS.gene051903	MS.gene069828	0.827865	1.24E-54	-1.69E-46
MS.gene051975	MS.gene069828	0.815792	7.71E-52	-1.69E-46
MS.gene052072	MS.gene069828	0.908919	1.01E-81	-1.69E-46
MS.gene052242	MS.gene069828	-0.82084	5.55E-53	-1.69E-46
MS.gene052296	MS.gene069828	0.880924	3.68E-70	-1.69E-46
MS.gene052307	MS.gene069828	0.832024	1.20E-55	-1.69E-46
MS.gene052335	MS.gene069828	0.839381	1.64E-57	-1.69E-46
MS.gene052342	MS.gene069828	0.832416	9.57E-56	-1.69E-46
MS.gene052370	MS.gene069828	0.817908	2.58E-52	-1.69E-46
MS.gene052479	MS.gene069828	0.838318	3.09E-57	-1.69E-46
MS.gene052518	MS.gene069828	0.804647	1.95E-49	-1.69E-46
MS.gene052533	MS.gene069828	0.828375	9.31E-55	-1.69E-46
MS.gene052793	MS.gene069828	0.857713	1.35E-62	-1.69E-46
MS.gene052947	MS.gene069828	0.841057	5.99E-58	-1.69E-46
MS.gene053045	MS.gene069828	0.804836	1.78E-49	-1.69E-46
MS.gene053058	MS.gene069828	0.815433	9.27E-52	-1.69E-46
MS.gene053228	MS.gene069828	0.809988	1.44E-50	-1.69E-46
MS.gene053564	MS.gene069828	0.801732	7.84E-49	-1.69E-46
MS.gene053590	MS.gene069828	0.811778	5.91E-51	-1.69E-46
MS.gene05364	MS.gene069828	0.823733	1.18E-53	-1.69E-46
MS.gene053879	MS.gene069828	0.845722	3.40E-59	-1.69E-46
MS.gene054004	MS.gene069828	0.872131	4.02E-67	-1.69E-46
MS.gene054005	MS.gene069828	0.817187	3.76E-52	-1.69E-46
MS.gene054403	MS.gene069828	0.902728	7.20E-79	-1.69E-46
MS.gene054413	MS.gene069828	0.8345	2.89E-56	-1.69E-46
MS.gene05469	MS.gene069828	0.851734	7.32E-61	-1.69E-46
MS.gene054709	MS.gene069828	0.827182	1.80E-54	-1.69E-46
MS.gene055150	MS.gene069828	0.805341	1.40E-49	-1.69E-46
MS.gene055424	MS.gene069828	0.808559	2.92E-50	-1.69E-46
MS.gene055555	MS.gene069828	0.820529	6.54E-53	-1.69E-46
MS.gene055765	MS.gene069828	0.817587	3.05E-52	-1.69E-46
MS.gene056181	MS.gene069828	0.813681	2.26E-51	-1.69E-46
MS.gene056578	MS.gene069828	0.830996	2.14E-55	-1.69E-46
MS.gene056693	MS.gene069828	0.826669	2.39E-54	-1.69E-46
MS.gene056699	MS.gene069828	0.800637	1.31E-48	-1.69E-46
MS.gene056786	MS.gene069828	0.800874	1.17E-48	-1.69E-46
MS.gene056787	MS.gene069828	0.805132	1.55E-49	-1.69E-46
MS.gene056881	MS.gene069828	0.852807	3.62E-61	-1.69E-46
MS.gene056986	MS.gene069828	0.817593	3.04E-52	-1.69E-46
MS.gene057102	MS.gene069828	0.875017	4.29E-68	-1.69E-46
MS.gene057234	MS.gene069828	0.837943	3.86E-57	-1.69E-46
MS.gene057694	MS.gene069828	0.845959	2.93E-59	-1.69E-46
MS.gene057705	MS.gene069828	0.844044	9.64E-59	-1.69E-46
MS.gene05781	MS.gene069828	0.835948	1.25E-56	-1.69E-46
MS.gene057890	MS.gene069828	-0.817399	3.37E-52	-1.69E-46
MS.gene057999	MS.gene069828	0.867806	1.04E-65	-1.69E-46
MS.gene058008	MS.gene069828	0.827541	1.48E-54	-1.69E-46
MS.gene058054	MS.gene069828	0.836737	7.85E-57	-1.69E-46
MS.gene058055	MS.gene069828	0.829463	5.08E-55	-1.69E-46
MS.gene058074	MS.gene069828	0.864481	1.18E-64	-1.69E-46
MS.gene058149	MS.gene069828	0.838143	3.43E-57	-1.69E-46
MS.gene058159	MS.gene069828	0.815746	7.89E-52	-1.69E-46
MS.gene058261	MS.gene069828	0.828115	1.08E-54	-1.69E-46
MS.gene058592	MS.gene069828	0.805911	1.06E-49	-1.69E-46
MS.gene058781	MS.gene069828	0.804347	2.26E-49	-1.69E-46
MS.gene059146	MS.gene069828	0.862853	3.78E-64	-1.69E-46
MS.gene059171	MS.gene069828	0.82321	1.57E-53	-1.69E-46
MS.gene059227	MS.gene069828	0.850908	1.25E-60	-1.69E-46
MS.gene059590	MS.gene069828	0.83159	1.53E-55	-1.69E-46
MS.gene059778	MS.gene069828	0.8052	1.50E-49	-1.69E-46
MS.gene059802	MS.gene069828	0.844504	7.26E-59	-1.69E-46
MS.gene05985	MS.gene069828	-0.840716	7.35E-58	-1.69E-46
MS.gene06011	MS.gene069828	0.832682	8.22E-56	-1.69E-46
MS.gene06018	MS.gene069828	0.805887	1.07E-49	-1.69E-46
MS.gene060244	MS.gene069828	0.841712	4.02E-58	-1.69E-46
MS.gene060424	MS.gene069828	0.801827	7.49E-49	-1.69E-46
MS.gene060763	MS.gene069828	0.873476	1.43E-67	-1.69E-46
MS.gene060933	MS.gene069828	0.817712	2.86E-52	-1.69E-46
MS.gene060935	MS.gene069828	0.851907	6.54E-61	-1.69E-46
MS.gene060937	MS.gene069828	0.859026	5.50E-63	-1.69E-46
MS.gene061100	MS.gene069828	0.854427	1.24E-61	-1.69E-46
MS.gene061243	MS.gene069828	0.816991	4.16E-52	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene069828.t1	MTR_2g083180	100.000	110	0	0	1	110	1	110	1.41e-79	229
MS.gene069828.t1	MTR_2g083180	92.727	110	8	0	1	110	1	110	2.18e-72	211
MS.gene069828.t1	MTR_2g083180	100.000	100	0	0	1	100	1	100	1.35e-71	209
MS.gene069828.t1	MTR_4g046733	88.000	100	11	1	1	100	1	99	1.17e-62	186
MS.gene069828.t1	MTR_2g083180	95.699	93	4	0	8	100	10	102	2.29e-62	186
MS.gene069828.t1	MTR_2g083180	100.000	83	0	0	1	83	1	83	1.69e-58	175
MS.gene069828.t1	MTR_3g051950	78.000	100	20	1	1	100	1	98	1.39e-51	158
MS.gene069828.t1	MTR_5g092820	73.196	97	24	1	4	100	2	96	2.78e-47	147

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene069828.t1	AT4G27130	88.000	100	11	1	1	100	1	99	2.63e-62	185
MS.gene069828.t1	AT5G54760	87.000	100	12	1	1	100	1	99	1.29e-61	184
MS.gene069828.t1	AT5G54760	87.000	100	12	1	1	100	1	99	1.29e-61	184
MS.gene069828.t1	AT5G54760	87.000	100	12	1	1	100	1	99	1.29e-61	184
MS.gene069828.t1	AT5G54760	87.000	100	12	1	1	100	1	99	1.29e-61	184
MS.gene069828.t1	AT1G54290	86.000	100	13	1	1	100	1	99	7.15e-61	182
MS.gene069828.t1	AT5G54940	75.000	100	23	1	1	100	1	98	3.03e-50	155
MS.gene069828.t1	AT5G54940	75.000	100	23	1	1	100	1	98	3.03e-50	155
MS.gene069828.t1	AT5G54940	75.000	100	23	1	1	100	1	98	3.03e-50	155

Find 25 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATGAATGACTTCACATCTT+TGG	0.277476	2.1:-17893301	MS.gene069828:CDS
AATGCTGAGGACGCCGGTGC+TGG	0.285317	2.1:-17893627	MS.gene069828:CDS
TTCGCTGCTGTATACGAATA+TGG	0.326573	2.1:+17893586	None:intergenic
ATTCATTACCTGGACTAAAA+AGG	0.327921	2.1:+17893317	None:intergenic
CCTGTCCTTGCTCTGGGTCC+TGG	0.375764	2.1:+17893457	None:intergenic
AGACATACCTGTCCTTGCTC+TGG	0.415595	2.1:+17893450	None:intergenic
TACAACAAAACTCCTTCTTA+AGG	0.416659	2.1:+17893493	None:intergenic
GACATACCTGTCCTTGCTCT+GGG	0.463686	2.1:+17893451	None:intergenic
TGAATTCTTTCTTCAATCCC+TGG	0.465760	2.1:+17893538	None:intergenic
GTGTAGGTTATTCAACTTCA+AGG	0.470369	2.1:-17893363	MS.gene069828:intron
TTGTAATGGTACAGTTGTCC+AGG	0.470439	2.1:-17893475	MS.gene069828:CDS
ATGCTGAGGACGCCGGTGCT+GGG	0.477491	2.1:-17893626	MS.gene069828:CDS
TCAGCATTTGCCTCAGCAAA+AGG	0.478903	2.1:+17893642	None:intergenic
ATTCGTATACAGCAGCGAAA+TGG	0.491023	2.1:-17893582	MS.gene069828:CDS
CGCCGGTGCTGGGTCATCAA+AGG	0.522725	2.1:-17893616	MS.gene069828:CDS
AAAAGCTTGACAACTGTCCA+GGG	0.558576	2.1:-17893555	MS.gene069828:CDS
ATGTGAAGTCATTCATTACC+TGG	0.562547	2.1:+17893307	None:intergenic
TTCAACTTCAAGGCGATCAG+AGG	0.577444	2.1:-17893353	MS.gene069828:CDS
GAGGCAAATGCTGAGGACGC+CGG	0.578099	2.1:-17893633	MS.gene069828:CDS
CTCCTTTGATGACCCAGCAC+CGG	0.583753	2.1:+17893614	None:intergenic
GATTCTGAAAGACCTTAAGA+AGG	0.584832	2.1:-17893505	MS.gene069828:CDS
CCAGGACCCAGAGCAAGGAC+AGG	0.587475	2.1:-17893457	MS.gene069828:intron
GCACAAATTCCTACTGCCTA+CGG	0.609588	2.1:-17894597	MS.gene069828:intron
GTTGTCCAGGACCCAGAGCA+AGG	0.630590	2.1:-17893462	MS.gene069828:CDS
TCCAACTTACCGTAGGCAGT+AGG	0.690363	2.1:+17894588	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GTTATAAGTAAAAAAAAATA+GGG	+	chr2.1:17893742-17893761	None:intergenic	10.0%
!!!	TTTGAATTTTTATTATCTTT+AGG	-	chr2.1:17893506-17893525	MS.gene069828:CDS	10.0%
!!	CGTTATAAGTAAAAAAAAAT+AGG	+	chr2.1:17893743-17893762	None:intergenic	15.0%
!!!	CTTCAAATAACATTTTTTTA+TGG	-	chr2.1:17894520-17894539	MS.gene069828:intron	15.0%
!!!	GTTTTTAATGTTTATACTTT+GGG	-	chr2.1:17893919-17893938	MS.gene069828:intron	15.0%
!!!	TTTCTAAAATAGTTTTTTCT+GGG	-	chr2.1:17893872-17893891	MS.gene069828:intron	15.0%
!!!	TTTTCTAAAATAGTTTTTTC+TGG	-	chr2.1:17893871-17893890	MS.gene069828:intron	15.0%
!!!	AAATTGGATTTTTAAAGCTT+AGG	-	chr2.1:17894054-17894073	MS.gene069828:intron	20.0%
!!!	ATAACATTTTTTTATGGTGT+AGG	-	chr2.1:17894526-17894545	MS.gene069828:intron	20.0%
!!!	ATATTGCTTTTACTTTTACT+TGG	-	chr2.1:17893704-17893723	MS.gene069828:intron	20.0%
!!!	GGTTTTTAATGTTTATACTT+TGG	-	chr2.1:17893918-17893937	MS.gene069828:intron	20.0%
!!!	TTCTAAAATAGTTTTTTCTG+GGG	-	chr2.1:17893873-17893892	MS.gene069828:intron	20.0%
!!!	TTGATCTGAAATAGTATTTT+GGG	-	chr2.1:17894015-17894034	MS.gene069828:intron	20.0%
!!!	TTTGATCTGAAATAGTATTT+TGG	-	chr2.1:17894014-17894033	MS.gene069828:intron	20.0%
!	AAAAAATTCTGTGTGATTCT+TGG	+	chr2.1:17893854-17893873	None:intergenic	25.0%
!	AGATGAAGAATAGAAATAGA+TGG	-	chr2.1:17894145-17894164	MS.gene069828:intron	25.0%
!	ATAGAAGAATTTCTCATTTC+TGG	+	chr2.1:17893613-17893632	None:intergenic	25.0%
!	TAAAAGCAATATCAGTAAGA+AGG	+	chr2.1:17893696-17893715	None:intergenic	25.0%
!	TCAAAGTTATGTACAATGAT+TGG	+	chr2.1:17893999-17894018	None:intergenic	25.0%
!	TTAAGCATCTTGTTCAATAA+TGG	+	chr2.1:17893970-17893989	None:intergenic	25.0%
!!	AAATGTTATTTGAAGCAACA+AGG	+	chr2.1:17894515-17894534	None:intergenic	25.0%
!!	AATGTTATTTGAAGCAACAA+GGG	+	chr2.1:17894514-17894533	None:intergenic	25.0%
!!!	TGATCTGAAATAGTATTTTG+GGG	-	chr2.1:17894016-17894035	MS.gene069828:intron	25.0%
	AATGAATGACTTCACATCTT+TGG	-	chr2.1:17894604-17894623	MS.gene069828:CDS	30.0%
	ATATGATATATGACTCCTGT+GGG	-	chr2.1:17894218-17894237	MS.gene069828:intron	30.0%
	ATTCATTACCTGGACTAAAA+AGG	+	chr2.1:17894591-17894610	None:intergenic	30.0%
	CAATTATACTGTGTACTGTT+GGG	-	chr2.1:17893435-17893454	MS.gene069828:intron	30.0%
	GAATTTACTAGTCAATTGTC+AGG	+	chr2.1:17893547-17893566	None:intergenic	30.0%
	TACAACAAAACTCCTTCTTA+AGG	+	chr2.1:17894415-17894434	None:intergenic	30.0%
	TCAATTATACTGTGTACTGT+TGG	-	chr2.1:17893434-17893453	MS.gene069828:intron	30.0%
!	AATTTTAGATCCTTTTGCTG+AGG	-	chr2.1:17894253-17894272	MS.gene069828:intron	30.0%
!	ATGTTATTTGAAGCAACAAG+GGG	+	chr2.1:17894513-17894532	None:intergenic	30.0%
!!!	AAGAAGGAGTTTTGTTGTAA+TGG	-	chr2.1:17894416-17894435	MS.gene069828:intron	30.0%
	AGGATCTTAACGTTTGTGAA+GGG	-	chr2.1:17894074-17894093	MS.gene069828:intron	35.0%
	ATGTGAAGTCATTCATTACC+TGG	+	chr2.1:17894601-17894620	None:intergenic	35.0%
	GATATGATATATGACTCCTG+TGG	-	chr2.1:17894217-17894236	MS.gene069828:intron	35.0%
	GTGTAGGTTATTCAACTTCA+AGG	-	chr2.1:17894542-17894561	MS.gene069828:intron	35.0%
	TACATAATGAATGCTGTGTG+AGG	+	chr2.1:17894126-17894145	None:intergenic	35.0%
	TAGGATCTTAACGTTTGTGA+AGG	-	chr2.1:17894073-17894092	MS.gene069828:intron	35.0%
	TGAATTCTTTCTTCAATCCC+TGG	+	chr2.1:17894370-17894389	None:intergenic	35.0%
	TTCATGATATGCAGTCATTC+TGG	-	chr2.1:17893391-17893410	MS.gene069828:intron	35.0%
!	ATATGCAGTCATTCTGGAAA+GGG	-	chr2.1:17893397-17893416	MS.gene069828:intron	35.0%
!	GATTCTGAAAGACCTTAAGA+AGG	-	chr2.1:17894400-17894419	MS.gene069828:intron	35.0%
!	GCTTAACGTGGTTTAAGATT+GGG	-	chr2.1:17893897-17893916	MS.gene069828:intron	35.0%
!	GTCTTGAGGTGGTTTAAAAT+TGG	-	chr2.1:17894038-17894057	MS.gene069828:intron	35.0%
!	TGCTTAACGTGGTTTAAGAT+TGG	-	chr2.1:17893896-17893915	MS.gene069828:intron	35.0%
!!	AATCTGAGACAGCATTTTCA+AGG	+	chr2.1:17893463-17893482	None:intergenic	35.0%
!!	CATTTCTGGAGTTTAGTTGA+AGG	+	chr2.1:17893668-17893687	None:intergenic	35.0%
!!!	AATAGTATTTTGGGGTCTTG+AGG	-	chr2.1:17894024-17894043	MS.gene069828:intron	35.0%
	AAAAAGCTTGACAACTGTCC+AGG	-	chr2.1:17894349-17894368	MS.gene069828:intron	40.0%
	AAAAGCTTGACAACTGTCCA+GGG	-	chr2.1:17894350-17894369	MS.gene069828:intron	40.0%
	ATAGAGTTCCAACTTACCGT+AGG	+	chr2.1:17893327-17893346	None:intergenic	40.0%
	ATTCGTATACAGCAGCGAAA+TGG	-	chr2.1:17894323-17894342	MS.gene069828:intron	40.0%
	GTAAGAAGGCAACTCATTTC+TGG	+	chr2.1:17893682-17893701	None:intergenic	40.0%
	TTCGCTGCTGTATACGAATA+TGG	+	chr2.1:17894322-17894341	None:intergenic	40.0%
	TTGTAATGGTACAGTTGTCC+AGG	-	chr2.1:17894430-17894449	MS.gene069828:intron	40.0%
!	GATATGCAGTCATTCTGGAA+AGG	-	chr2.1:17893396-17893415	MS.gene069828:intron	40.0%
!!	TGTGTCTACCTTTTTAGTCC+AGG	-	chr2.1:17894580-17894599	MS.gene069828:intron	40.0%
!!	TTGGGTTTTATCGTGTGTGA+AGG	-	chr2.1:17893937-17893956	MS.gene069828:intron	40.0%
	GACAGACAACACGCATCAAT+AGG	+	chr2.1:17893356-17893375	None:intergenic	45.0%
	GCACAAATTCCTACTGCCTA+CGG	-	chr2.1:17893308-17893327	MS.gene069828:CDS	45.0%
	TCAGCATTTGCCTCAGCAAA+AGG	+	chr2.1:17894266-17894285	None:intergenic	45.0%
	TTCAACTTCAAGGCGATCAG+AGG	-	chr2.1:17894552-17894571	MS.gene069828:intron	45.0%
!	TTTTGCTGAGGCAAATGCTG+AGG	-	chr2.1:17894265-17894284	MS.gene069828:intron	45.0%
!!!	AGTATTTTGGGGTCTTGAGG+TGG	-	chr2.1:17894027-17894046	MS.gene069828:intron	45.0%
!!!	TTTTTCTGGGGTGCTTAACG+TGG	-	chr2.1:17893885-17893904	MS.gene069828:intron	45.0%
	AGACATACCTGTCCTTGCTC+TGG	+	chr2.1:17894458-17894477	None:intergenic	50.0%
	ATTGTTGCCACACATCCCAC+AGG	+	chr2.1:17894236-17894255	None:intergenic	50.0%
	GACATACCTGTCCTTGCTCT+GGG	+	chr2.1:17894457-17894476	None:intergenic	50.0%
	TATGACTCCTGTGGGATGTG+TGG	-	chr2.1:17894226-17894245	MS.gene069828:intron	50.0%
	TCCAACTTACCGTAGGCAGT+AGG	+	chr2.1:17893320-17893339	None:intergenic	50.0%
	TCCTACTGCCTACGGTAAGT+TGG	-	chr2.1:17893316-17893335	MS.gene069828:CDS	50.0%
!	CTCCTTTGATGACCCAGCAC+CGG	+	chr2.1:17894294-17894313	None:intergenic	55.0%
	GAGGCAAATGCTGAGGACGC+CGG	-	chr2.1:17894272-17894291	MS.gene069828:intron	60.0%
	GTTGTCCAGGACCCAGAGCA+AGG	-	chr2.1:17894443-17894462	MS.gene069828:intron	60.0%
	AATGCTGAGGACGCCGGTGC+TGG	-	chr2.1:17894278-17894297	MS.gene069828:intron	65.0%
	ATGCTGAGGACGCCGGTGCT+GGG	-	chr2.1:17894279-17894298	MS.gene069828:intron	65.0%
	CCAGGACCCAGAGCAAGGAC+AGG	-	chr2.1:17894448-17894467	MS.gene069828:intron	65.0%
!	CCTGTCCTTGCTCTGGGTCC+TGG	+	chr2.1:17894451-17894470	None:intergenic	65.0%
!	CGCCGGTGCTGGGTCATCAA+AGG	-	chr2.1:17894289-17894308	MS.gene069828:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.1	gene	17893293	17894634	17893293	ID=MS.gene069828
chr2.1	mRNA	17893293	17894634	17893293	ID=MS.gene069828.t1;Parent=MS.gene069828
chr2.1	exon	17894598	17894634	17894598	ID=MS.gene069828.t1.exon1;Parent=MS.gene069828.t1
chr2.1	CDS	17894598	17894634	17894598	ID=cds.MS.gene069828.t1;Parent=MS.gene069828.t1
chr2.1	exon	17893458	17893666	17893458	ID=MS.gene069828.t1.exon2;Parent=MS.gene069828.t1
chr2.1	CDS	17893458	17893666	17893458	ID=cds.MS.gene069828.t1;Parent=MS.gene069828.t1
chr2.1	exon	17893293	17893379	17893293	ID=MS.gene069828.t1.exon3;Parent=MS.gene069828.t1
chr2.1	CDS	17893293	17893379	17893293	ID=cds.MS.gene069828.t1;Parent=MS.gene069828.t1

Gene Sequence

>MS.gene069828

ATGTCTGAATTAGACGCACAAATTCCTACTGCCTACGGTAAGTTGGAACTCTATACTATACCTATTGATGCGTGTTGTCTGTCAGATTAATTGTTCTGTTCATGATATGCAGTCATTCTGGAAAGGGTAGTCAATAGTTGTTCAATTATACTGTGTACTGTTGGGTTCCTTGAAAATGCTGTCTCAGATTATTAACATTAGCATATCTTTTGTTTTGAATTTTTATTATCTTTAGGTTTTCATTGTTTATACCTGACAATTGACTAGTAAATTCTATTTTCTCTTTTATGTTAAAACGTAGATGTATTATCTAAACTCCAGAAATGAGAAATTCTTCTATTAACTCTTATGTTAAAATGTAGATGCATTATACCTTCAACTAAACTCCAGAAATGAGTTGCCTTCTTACTGATATTGCTTTTACTTTTACTTGGACATGATGTTGACCCTATTTTTTTTTACTTATAACGATAATCAGTGTGTTAATAGTATTGTTCTTGCAAATGTTAAATGTTAATTAGATGTCATTTCATTATTTAACGAGATGCTTAAAAGATGCCAAGAATCACACAGAATTTTTTTCTAAAATAGTTTTTTCTGGGGTGCTTAACGTGGTTTAAGATTGGGTTTTTAATGTTTATACTTTGGGTTTTATCGTGTGTGAAGGTTTCGTTCCATTATTGAACAAGATGCTTAAAAGATGCCAATCATTGTACATAACTTTGATCTGAAATAGTATTTTGGGGTCTTGAGGTGGTTTAAAATTGGATTTTTAAAGCTTAGGATCTTAACGTTTGTGAAGGGTAAAAATGTAAAATTGATACTTACAGCCTCACACAGCATTCATTATGTAGATGAAGAATAGAAATAGATGGTTTCTGTGTGATCATGATAATTAAGTTTGACTATTGATTATCTTACTTTGATATGATATATGACTCCTGTGGGATGTGTGGCAACAATTTTAGATCCTTTTGCTGAGGCAAATGCTGAGGACGCCGGTGCTGGGTCATCAAAGGAGTACGTCCATATTCGTATACAGCAGCGAAATGGTAGAAAAAGCTTGACAACTGTCCAGGGATTGAAGAAAGAATTCAGTTACAACAAGATTCTGAAAGACCTTAAGAAGGAGTTTTGTTGTAATGGTACAGTTGTCCAGGACCCAGAGCAAGGACAGGTATGTCTTGATGTTCTCTTGTTAGATAGCGATCTATCTACCCCTTGTTGCTTCAAATAACATTTTTTTATGGTGTAGGTTATTCAACTTCAAGGCGATCAGAGGAAAAATGTGTCTACCTTTTTAGTCCAGGTAATGAATGACTTCACATCTTTGGTTTTATGA

Protein sequence

>MS.gene069828.t1

MSELDAQIPTAYDPFAEANAEDAGAGSSKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPEQGQVIQLQGDQRKNVSTFLVQVMNDFTSLVL