Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072415.t1 | XP_013469515.1 | 95.3 | 190 | 9 | 0 | 2 | 191 | 23 | 212 | 1.30E-101 | 379 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072415.t1 | A0A072VQ60 | 95.3 | 190 | 9 | 0 | 2 | 191 | 23 | 212 | 9.2e-102 | 379.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene072415.t1 | TR | mTERF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049134 | MS.gene072415 | -0.824265 | 8.86E-54 | -1.69E-46 |
MS.gene049149 | MS.gene072415 | 0.817207 | 3.72E-52 | -1.69E-46 |
MS.gene049150 | MS.gene072415 | 0.845765 | 3.31E-59 | -1.69E-46 |
MS.gene049153 | MS.gene072415 | 0.841907 | 3.57E-58 | -1.69E-46 |
MS.gene049170 | MS.gene072415 | 0.802408 | 5.69E-49 | -1.69E-46 |
MS.gene04933 | MS.gene072415 | 0.800235 | 1.58E-48 | -1.69E-46 |
MS.gene049346 | MS.gene072415 | 0.816199 | 6.25E-52 | -1.69E-46 |
MS.gene049356 | MS.gene072415 | 0.839436 | 1.59E-57 | -1.69E-46 |
MS.gene049378 | MS.gene072415 | 0.809212 | 2.12E-50 | -1.69E-46 |
MS.gene049661 | MS.gene072415 | 0.802491 | 5.47E-49 | -1.69E-46 |
MS.gene049662 | MS.gene072415 | 0.800682 | 1.29E-48 | -1.69E-46 |
MS.gene049758 | MS.gene072415 | 0.841254 | 5.31E-58 | -1.69E-46 |
MS.gene049910 | MS.gene072415 | 0.808141 | 3.58E-50 | -1.69E-46 |
MS.gene049915 | MS.gene072415 | 0.802495 | 5.46E-49 | -1.69E-46 |
MS.gene050122 | MS.gene072415 | 0.811158 | 8.05E-51 | -1.69E-46 |
MS.gene050301 | MS.gene072415 | 0.859057 | 5.38E-63 | -1.69E-46 |
MS.gene050397 | MS.gene072415 | 0.807507 | 4.89E-50 | -1.69E-46 |
MS.gene050426 | MS.gene072415 | -0.828462 | 8.87E-55 | -1.69E-46 |
MS.gene050464 | MS.gene072415 | 0.821721 | 3.47E-53 | -1.69E-46 |
MS.gene050529 | MS.gene072415 | 0.810854 | 9.37E-51 | -1.69E-46 |
MS.gene050558 | MS.gene072415 | 0.806157 | 9.43E-50 | -1.69E-46 |
MS.gene050625 | MS.gene072415 | 0.801452 | 8.94E-49 | -1.69E-46 |
MS.gene050670 | MS.gene072415 | 0.898063 | 7.66E-77 | -1.69E-46 |
MS.gene050787 | MS.gene072415 | 0.810018 | 1.42E-50 | -1.69E-46 |
MS.gene050971 | MS.gene072415 | 0.805377 | 1.37E-49 | -1.69E-46 |
MS.gene05105 | MS.gene072415 | 0.849775 | 2.60E-60 | -1.69E-46 |
MS.gene051360 | MS.gene072415 | 0.829512 | 4.94E-55 | -1.69E-46 |
MS.gene051525 | MS.gene072415 | 0.851449 | 8.81E-61 | -1.69E-46 |
MS.gene051582 | MS.gene072415 | 0.839239 | 1.78E-57 | -1.69E-46 |
MS.gene051588 | MS.gene072415 | 0.803603 | 3.22E-49 | -1.69E-46 |
MS.gene051860 | MS.gene072415 | 0.871918 | 4.74E-67 | -1.69E-46 |
MS.gene051983 | MS.gene072415 | 0.812766 | 3.59E-51 | -1.69E-46 |
MS.gene052011 | MS.gene072415 | -0.858219 | 9.58E-63 | -1.69E-46 |
MS.gene052025 | MS.gene072415 | 0.80735 | 5.28E-50 | -1.69E-46 |
MS.gene052077 | MS.gene072415 | 0.869856 | 2.26E-66 | -1.69E-46 |
MS.gene052135 | MS.gene072415 | 0.821705 | 3.50E-53 | -1.69E-46 |
MS.gene052188 | MS.gene072415 | 0.872783 | 2.44E-67 | -1.69E-46 |
MS.gene052207 | MS.gene072415 | 0.800577 | 1.35E-48 | -1.69E-46 |
MS.gene052253 | MS.gene072415 | 0.881856 | 1.69E-70 | -1.69E-46 |
MS.gene052255 | MS.gene072415 | 0.818825 | 1.60E-52 | -1.69E-46 |
MS.gene052310 | MS.gene072415 | 0.820792 | 5.69E-53 | -1.69E-46 |
MS.gene052340 | MS.gene072415 | 0.861122 | 1.28E-63 | -1.69E-46 |
MS.gene052414 | MS.gene072415 | 0.848542 | 5.74E-60 | -1.69E-46 |
MS.gene052481 | MS.gene072415 | 0.820556 | 6.44E-53 | -1.69E-46 |
MS.gene052485 | MS.gene072415 | 0.848163 | 7.30E-60 | -1.69E-46 |
MS.gene052982 | MS.gene072415 | 0.808321 | 3.28E-50 | -1.69E-46 |
MS.gene053209 | MS.gene072415 | 0.835123 | 2.01E-56 | -1.69E-46 |
MS.gene053836 | MS.gene072415 | 0.869675 | 2.59E-66 | -1.69E-46 |
MS.gene053928 | MS.gene072415 | 0.804738 | 1.87E-49 | -1.69E-46 |
MS.gene054011 | MS.gene072415 | 0.813124 | 3.00E-51 | -1.69E-46 |
MS.gene054123 | MS.gene072415 | 0.808548 | 2.93E-50 | -1.69E-46 |
MS.gene054183 | MS.gene072415 | 0.863469 | 2.43E-64 | -1.69E-46 |
MS.gene054349 | MS.gene072415 | 0.83578 | 1.37E-56 | -1.69E-46 |
MS.gene054473 | MS.gene072415 | 0.855455 | 6.24E-62 | -1.69E-46 |
MS.gene054542 | MS.gene072415 | 0.802118 | 6.53E-49 | -1.69E-46 |
MS.gene054556 | MS.gene072415 | 0.831727 | 1.42E-55 | -1.69E-46 |
MS.gene054719 | MS.gene072415 | 0.834817 | 2.41E-56 | -1.69E-46 |
MS.gene054917 | MS.gene072415 | 0.831002 | 2.14E-55 | -1.69E-46 |
MS.gene054918 | MS.gene072415 | 0.857474 | 1.59E-62 | -1.69E-46 |
MS.gene054920 | MS.gene072415 | 0.805588 | 1.24E-49 | -1.69E-46 |
MS.gene054930 | MS.gene072415 | 0.852495 | 4.45E-61 | -1.69E-46 |
MS.gene054983 | MS.gene072415 | 0.832767 | 7.83E-56 | -1.69E-46 |
MS.gene055116 | MS.gene072415 | 0.906965 | 8.43E-81 | -1.69E-46 |
MS.gene055369 | MS.gene072415 | 0.812378 | 4.37E-51 | -1.69E-46 |
MS.gene055422 | MS.gene072415 | 0.839949 | 1.17E-57 | -1.69E-46 |
MS.gene055428 | MS.gene072415 | 0.822845 | 1.90E-53 | -1.69E-46 |
MS.gene05553 | MS.gene072415 | 0.847292 | 1.27E-59 | -1.69E-46 |
MS.gene055564 | MS.gene072415 | 0.810196 | 1.30E-50 | -1.69E-46 |
MS.gene055604 | MS.gene072415 | 0.829605 | 4.69E-55 | -1.69E-46 |
MS.gene055859 | MS.gene072415 | 0.851676 | 7.60E-61 | -1.69E-46 |
MS.gene05594 | MS.gene072415 | 0.834086 | 3.67E-56 | -1.69E-46 |
MS.gene05602 | MS.gene072415 | 0.813729 | 2.21E-51 | -1.69E-46 |
MS.gene056191 | MS.gene072415 | 0.808918 | 2.45E-50 | -1.69E-46 |
MS.gene056407 | MS.gene072415 | 0.86772 | 1.11E-65 | -1.69E-46 |
MS.gene056511 | MS.gene072415 | 0.842661 | 2.26E-58 | -1.69E-46 |
MS.gene056612 | MS.gene072415 | 0.804543 | 2.05E-49 | -1.69E-46 |
MS.gene056659 | MS.gene072415 | 0.829258 | 5.69E-55 | -1.69E-46 |
MS.gene056723 | MS.gene072415 | 0.841414 | 4.82E-58 | -1.69E-46 |
MS.gene056899 | MS.gene072415 | -0.824535 | 7.66E-54 | -1.69E-46 |
MS.gene056902 | MS.gene072415 | 0.809759 | 1.61E-50 | -1.69E-46 |
MS.gene05702 | MS.gene072415 | 0.833899 | 4.09E-56 | -1.69E-46 |
MS.gene057121 | MS.gene072415 | 0.806182 | 9.31E-50 | -1.69E-46 |
MS.gene057124 | MS.gene072415 | 0.820807 | 5.64E-53 | -1.69E-46 |
MS.gene057245 | MS.gene072415 | 0.806091 | 9.73E-50 | -1.69E-46 |
MS.gene057330 | MS.gene072415 | 0.839016 | 2.04E-57 | -1.69E-46 |
MS.gene057396 | MS.gene072415 | 0.819532 | 1.11E-52 | -1.69E-46 |
MS.gene057448 | MS.gene072415 | 0.844951 | 5.50E-59 | -1.69E-46 |
MS.gene057449 | MS.gene072415 | 0.822153 | 2.76E-53 | -1.69E-46 |
MS.gene057450 | MS.gene072415 | 0.840311 | 9.39E-58 | -1.69E-46 |
MS.gene057469 | MS.gene072415 | 0.839373 | 1.65E-57 | -1.69E-46 |
MS.gene057476 | MS.gene072415 | 0.818549 | 1.85E-52 | -1.69E-46 |
MS.gene057749 | MS.gene072415 | 0.866043 | 3.80E-65 | -1.69E-46 |
MS.gene057823 | MS.gene072415 | 0.859906 | 2.99E-63 | -1.69E-46 |
MS.gene057825 | MS.gene072415 | 0.823289 | 1.50E-53 | -1.69E-46 |
MS.gene058002 | MS.gene072415 | 0.866837 | 2.13E-65 | -1.69E-46 |
MS.gene058007 | MS.gene072415 | 0.829411 | 5.23E-55 | -1.69E-46 |
MS.gene058082 | MS.gene072415 | 0.817147 | 3.83E-52 | -1.69E-46 |
MS.gene05811 | MS.gene072415 | 0.849878 | 2.44E-60 | -1.69E-46 |
MS.gene058142 | MS.gene072415 | 0.851367 | 9.29E-61 | -1.69E-46 |
MS.gene058365 | MS.gene072415 | 0.806838 | 6.77E-50 | -1.69E-46 |
MS.gene058376 | MS.gene072415 | 0.820838 | 5.55E-53 | -1.69E-46 |
MS.gene058444 | MS.gene072415 | 0.806345 | 8.61E-50 | -1.69E-46 |
MS.gene058660 | MS.gene072415 | 0.819427 | 1.17E-52 | -1.69E-46 |
MS.gene058700 | MS.gene072415 | 0.839219 | 1.81E-57 | -1.69E-46 |
MS.gene058710 | MS.gene072415 | 0.880475 | 5.32E-70 | -1.69E-46 |
MS.gene05886 | MS.gene072415 | 0.856215 | 3.74E-62 | -1.69E-46 |
MS.gene058928 | MS.gene072415 | 0.821249 | 4.46E-53 | -1.69E-46 |
MS.gene058948 | MS.gene072415 | 0.808684 | 2.74E-50 | -1.69E-46 |
MS.gene058949 | MS.gene072415 | 0.84075 | 7.20E-58 | -1.69E-46 |
MS.gene059011 | MS.gene072415 | 0.817214 | 3.70E-52 | -1.69E-46 |
MS.gene05907 | MS.gene072415 | 0.861584 | 9.26E-64 | -1.69E-46 |
MS.gene059082 | MS.gene072415 | 0.819334 | 1.23E-52 | -1.69E-46 |
MS.gene059141 | MS.gene072415 | 0.810875 | 9.27E-51 | -1.69E-46 |
MS.gene059247 | MS.gene072415 | 0.80734 | 5.30E-50 | -1.69E-46 |
MS.gene059285 | MS.gene072415 | 0.880193 | 6.71E-70 | -1.69E-46 |
MS.gene059294 | MS.gene072415 | 0.807386 | 5.18E-50 | -1.69E-46 |
MS.gene059366 | MS.gene072415 | 0.813614 | 2.34E-51 | -1.69E-46 |
MS.gene059420 | MS.gene072415 | 0.888205 | 7.26E-73 | -1.69E-46 |
MS.gene059462 | MS.gene072415 | 0.839804 | 1.27E-57 | -1.69E-46 |
MS.gene059597 | MS.gene072415 | 0.83683 | 7.43E-57 | -1.69E-46 |
MS.gene059676 | MS.gene072415 | 0.812452 | 4.21E-51 | -1.69E-46 |
MS.gene059688 | MS.gene072415 | 0.869857 | 2.26E-66 | -1.69E-46 |
MS.gene059692 | MS.gene072415 | 0.856414 | 3.27E-62 | -1.69E-46 |
MS.gene059695 | MS.gene072415 | 0.85935 | 4.40E-63 | -1.69E-46 |
MS.gene059807 | MS.gene072415 | 0.810071 | 1.38E-50 | -1.69E-46 |
MS.gene05984 | MS.gene072415 | 0.870679 | 1.22E-66 | -1.69E-46 |
MS.gene059876 | MS.gene072415 | 0.854493 | 1.19E-61 | -1.69E-46 |
MS.gene060247 | MS.gene072415 | 0.802908 | 4.49E-49 | -1.69E-46 |
MS.gene06037 | MS.gene072415 | 0.819341 | 1.22E-52 | -1.69E-46 |
MS.gene060403 | MS.gene072415 | 0.862762 | 4.03E-64 | -1.69E-46 |
MS.gene060495 | MS.gene072415 | 0.816882 | 4.40E-52 | -1.69E-46 |
MS.gene060837 | MS.gene072415 | 0.829025 | 6.48E-55 | -1.69E-46 |
MS.gene060986 | MS.gene072415 | 0.81016 | 1.32E-50 | -1.69E-46 |
MS.gene061049 | MS.gene072415 | 0.864065 | 1.59E-64 | -1.69E-46 |
MS.gene061114 | MS.gene072415 | -0.818527 | 1.87E-52 | -1.69E-46 |
MS.gene061154 | MS.gene072415 | 0.853339 | 2.55E-61 | -1.69E-46 |
MS.gene061159 | MS.gene072415 | 0.804673 | 1.93E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072415.t1 | MTR_1g096340 | 95.263 | 190 | 9 | 0 | 2 | 191 | 23 | 212 | 2.03e-134 | 375 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072415.t1 | AT4G09620 | 67.073 | 164 | 50 | 2 | 29 | 191 | 50 | 210 | 4.51e-77 | 229 |
MS.gene072415.t1 | AT4G09620 | 67.073 | 164 | 50 | 2 | 29 | 191 | 52 | 212 | 5.14e-77 | 229 |
MS.gene072415.t1 | AT4G09620 | 67.073 | 164 | 50 | 2 | 29 | 191 | 52 | 212 | 5.14e-77 | 229 |
Find 36 sgRNAs with CRISPR-Local
Find 45 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCCTTGTTCATTCTCCTTAC+TGG | 0.079985 | 1.1:+69415182 | MS.gene072415:CDS |
TCCATTTACTGCCTCAAATT+TGG | 0.102598 | 1.1:-69415230 | None:intergenic |
CCTTCGAAATCCAAAAGTTT+TGG | 0.174584 | 1.1:+69415420 | MS.gene072415:CDS |
CCCAAATTTGAGGCAGTAAA+TGG | 0.185063 | 1.1:+69415229 | MS.gene072415:CDS |
AAATTACATCCAAGAACTTC+TGG | 0.252185 | 1.1:-69415319 | None:intergenic |
ATATTAAAACCCAAAACTTT+TGG | 0.261186 | 1.1:-69415430 | None:intergenic |
CCATTTACTGCCTCAAATTT+GGG | 0.285378 | 1.1:-69415229 | None:intergenic |
CCTTGTTCATTCTCCTTACT+GGG | 0.302250 | 1.1:+69415183 | MS.gene072415:CDS |
GATATTTGGCGATGGAATAA+TGG | 0.339231 | 1.1:-69414960 | None:intergenic |
CAATACTCCACTGCTCCTTC+AGG | 0.365711 | 1.1:-69415372 | None:intergenic |
AAGATACTTGGAAAAGCATT+TGG | 0.395197 | 1.1:+69415160 | MS.gene072415:CDS |
ATGGAACATTAGATTATCTA+AGG | 0.403508 | 1.1:+69415248 | MS.gene072415:CDS |
ATCATGCAGGCTGATCTTGC+TGG | 0.422712 | 1.1:+69414929 | None:intergenic |
TGATTGTAAGGGAGATTGTA+AGG | 0.441638 | 1.1:+69415453 | MS.gene072415:CDS |
GTATTGAAGGAAAATCTCTT+AGG | 0.453881 | 1.1:+69415389 | MS.gene072415:CDS |
AGGCACAATGCACTAGATGC+TGG | 0.458361 | 1.1:+69415473 | MS.gene072415:CDS |
TAACTTCGACGATGAAGAAA+AGG | 0.469350 | 1.1:+69415135 | MS.gene072415:CDS |
AAGGAGCAGTGGAGTATTGA+AGG | 0.472993 | 1.1:+69415376 | MS.gene072415:CDS |
GAAGAAAAGGACAAGATACT+TGG | 0.482017 | 1.1:+69415148 | MS.gene072415:CDS |
TGGCGATGGAATAATGGAAA+AGG | 0.502232 | 1.1:-69414954 | None:intergenic |
GTGATGAAGATCGGAGTATG+TGG | 0.505034 | 1.1:+69415083 | MS.gene072415:CDS |
TCACGATCTTCTCCCCAGTA+AGG | 0.522126 | 1.1:-69415196 | None:intergenic |
CAAATCATTCTACCAACCAT+TGG | 0.536249 | 1.1:+69415020 | MS.gene072415:CDS |
GGCACAATGCACTAGATGCT+GGG | 0.562129 | 1.1:+69415474 | MS.gene072415:CDS |
GAAGGAAGTTCCCAAATTTG+AGG | 0.566069 | 1.1:+69415219 | MS.gene072415:CDS |
TAATCTCAAGTGATGAAGAT+CGG | 0.572690 | 1.1:+69415074 | MS.gene072415:CDS |
CCCAGTAAGGAGAATGAACA+AGG | 0.586733 | 1.1:-69415183 | None:intergenic |
CTTGTTCATTCTCCTTACTG+GGG | 0.596220 | 1.1:+69415184 | MS.gene072415:CDS |
TAAAGATCCTGAAGGAGCAG+TGG | 0.596954 | 1.1:+69415365 | MS.gene072415:CDS |
ATGGTTGGTAGAATGATTTG+AGG | 0.603312 | 1.1:-69415017 | None:intergenic |
AGAACGCAATATCCAATGGT+TGG | 0.612381 | 1.1:-69415032 | None:intergenic |
TCGTAGAACGCAATATCCAA+TGG | 0.625607 | 1.1:-69415036 | None:intergenic |
AGCTAATATAAAGATCCTGA+AGG | 0.630758 | 1.1:+69415357 | MS.gene072415:CDS |
CTGGGGAGAAGATCGTGAGA+AGG | 0.634124 | 1.1:+69415201 | MS.gene072415:CDS |
CAAGTCTTGCAAAAGCAAAG+TGG | 0.634464 | 1.1:+69414993 | MS.gene072415:CDS |
TGATGAAGATCGGAGTATGT+GGG | 0.637812 | 1.1:+69415084 | MS.gene072415:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATTAAAACCCAAAACTTT+TGG | - | chr1.1:69415433-69415452 | None:intergenic | 20.0% |
!!! | GGTTTTAATATTGATTGTAA+GGG | + | chr1.1:69415442-69415461 | MS.gene072415:CDS | 20.0% |
! | AAAAAATTTCCAGAAGTTCT+TGG | + | chr1.1:69415310-69415329 | MS.gene072415:CDS | 25.0% |
! | ATGGAACATTAGATTATCTA+AGG | + | chr1.1:69415248-69415267 | MS.gene072415:CDS | 25.0% |
!!! | GGGTTTTAATATTGATTGTA+AGG | + | chr1.1:69415441-69415460 | MS.gene072415:CDS | 25.0% |
!!! | TGGAAATTTTTTAAGCAACT+TGG | - | chr1.1:69415302-69415321 | None:intergenic | 25.0% |
AAAAATCTGATATTTGGCGA+TGG | - | chr1.1:69414971-69414990 | None:intergenic | 30.0% | |
AAATTACATCCAAGAACTTC+TGG | - | chr1.1:69415322-69415341 | None:intergenic | 30.0% | |
AGCTAATATAAAGATCCTGA+AGG | + | chr1.1:69415357-69415376 | MS.gene072415:CDS | 30.0% | |
CTTGGCAAAAATCTGATATT+TGG | - | chr1.1:69414977-69414996 | None:intergenic | 30.0% | |
GTATTGAAGGAAAATCTCTT+AGG | + | chr1.1:69415389-69415408 | MS.gene072415:CDS | 30.0% | |
TAATCTCAAGTGATGAAGAT+CGG | + | chr1.1:69415074-69415093 | MS.gene072415:CDS | 30.0% | |
! | CTTCGAAATCCAAAAGTTTT+GGG | + | chr1.1:69415421-69415440 | MS.gene072415:CDS | 30.0% |
!! | AAGATACTTGGAAAAGCATT+TGG | + | chr1.1:69415160-69415179 | MS.gene072415:CDS | 30.0% |
CAAATCATTCTACCAACCAT+TGG | + | chr1.1:69415020-69415039 | MS.gene072415:CDS | 35.0% | |
CCATTTACTGCCTCAAATTT+GGG | - | chr1.1:69415232-69415251 | None:intergenic | 35.0% | |
GAAGAAAAGGACAAGATACT+TGG | + | chr1.1:69415148-69415167 | MS.gene072415:CDS | 35.0% | |
GATATTTGGCGATGGAATAA+TGG | - | chr1.1:69414963-69414982 | None:intergenic | 35.0% | |
TAACTTCGACGATGAAGAAA+AGG | + | chr1.1:69415135-69415154 | MS.gene072415:CDS | 35.0% | |
TCCATTTACTGCCTCAAATT+TGG | - | chr1.1:69415233-69415252 | None:intergenic | 35.0% | |
TGATTGTAAGGGAGATTGTA+AGG | + | chr1.1:69415453-69415472 | MS.gene072415:CDS | 35.0% | |
! | CCAAAACTTTTGGATTTCGA+AGG | - | chr1.1:69415423-69415442 | None:intergenic | 35.0% |
! | CCTTCGAAATCCAAAAGTTT+TGG | + | chr1.1:69415420-69415439 | MS.gene072415:CDS | 35.0% |
!! | ATGGTTGGTAGAATGATTTG+AGG | - | chr1.1:69415020-69415039 | None:intergenic | 35.0% |
AGAACGCAATATCCAATGGT+TGG | - | chr1.1:69415035-69415054 | None:intergenic | 40.0% | |
CAAGTCTTGCAAAAGCAAAG+TGG | + | chr1.1:69414993-69415012 | MS.gene072415:CDS | 40.0% | |
CCTTGTTCATTCTCCTTACT+GGG | + | chr1.1:69415183-69415202 | MS.gene072415:CDS | 40.0% | |
CTTGTTCATTCTCCTTACTG+GGG | + | chr1.1:69415184-69415203 | MS.gene072415:CDS | 40.0% | |
GAAGGAAGTTCCCAAATTTG+AGG | + | chr1.1:69415219-69415238 | MS.gene072415:CDS | 40.0% | |
TCGTAGAACGCAATATCCAA+TGG | - | chr1.1:69415039-69415058 | None:intergenic | 40.0% | |
TGATGAAGATCGGAGTATGT+GGG | + | chr1.1:69415084-69415103 | MS.gene072415:CDS | 40.0% | |
! | CCCAAATTTGAGGCAGTAAA+TGG | + | chr1.1:69415229-69415248 | MS.gene072415:CDS | 40.0% |
! | CTTTTGGATTTCGAAGGAGA+AGG | - | chr1.1:69415417-69415436 | None:intergenic | 40.0% |
! | TGGCGATGGAATAATGGAAA+AGG | - | chr1.1:69414957-69414976 | None:intergenic | 40.0% |
!! | CACTTTGCTTTTGCAAGACT+TGG | - | chr1.1:69414995-69415014 | None:intergenic | 40.0% |
CCCAGTAAGGAGAATGAACA+AGG | - | chr1.1:69415186-69415205 | None:intergenic | 45.0% | |
GTGATGAAGATCGGAGTATG+TGG | + | chr1.1:69415083-69415102 | MS.gene072415:CDS | 45.0% | |
TAAAGATCCTGAAGGAGCAG+TGG | + | chr1.1:69415365-69415384 | MS.gene072415:CDS | 45.0% | |
! | GCCTTGTTCATTCTCCTTAC+TGG | + | chr1.1:69415182-69415201 | MS.gene072415:CDS | 45.0% |
!! | AAGGAGCAGTGGAGTATTGA+AGG | + | chr1.1:69415376-69415395 | MS.gene072415:CDS | 45.0% |
AGGCACAATGCACTAGATGC+TGG | + | chr1.1:69415473-69415492 | MS.gene072415:CDS | 50.0% | |
CAATACTCCACTGCTCCTTC+AGG | - | chr1.1:69415375-69415394 | None:intergenic | 50.0% | |
GGCACAATGCACTAGATGCT+GGG | + | chr1.1:69415474-69415493 | MS.gene072415:CDS | 50.0% | |
TCACGATCTTCTCCCCAGTA+AGG | - | chr1.1:69415199-69415218 | None:intergenic | 50.0% | |
CTGGGGAGAAGATCGTGAGA+AGG | + | chr1.1:69415201-69415220 | MS.gene072415:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 69414932 | 69415507 | 69414932 | ID=MS.gene072415 |
chr1.1 | mRNA | 69414932 | 69415507 | 69414932 | ID=MS.gene072415.t1;Parent=MS.gene072415 |
chr1.1 | exon | 69414932 | 69415507 | 69414932 | ID=MS.gene072415.t1.exon1;Parent=MS.gene072415.t1 |
chr1.1 | CDS | 69414932 | 69415507 | 69414932 | ID=cds.MS.gene072415.t1;Parent=MS.gene072415.t1 |
Gene Sequence |
Protein sequence |