Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09865.t1 | XP_003625490.1 | 95.4 | 677 | 31 | 0 | 49 | 725 | 137 | 813 | 0.00E+00 | 1259.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09865.t1 | A1JRH8 | 28.4 | 197 | 123 | 5 | 306 | 485 | 4 | 199 | 4.6e-07 | 58.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09865.t1 | Q2HT93 | 95.4 | 677 | 31 | 0 | 49 | 725 | 137 | 813 | 0.0e+00 | 1259.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene09865 | 0.826129 | 3.21E-54 | -1.69E-46 |
| MS.gene049222 | MS.gene09865 | 0.82814 | 1.06E-54 | -1.69E-46 |
| MS.gene049232 | MS.gene09865 | 0.874401 | 6.95E-68 | -1.69E-46 |
| MS.gene049285 | MS.gene09865 | 0.818345 | 2.06E-52 | -1.69E-46 |
| MS.gene049320 | MS.gene09865 | 0.822223 | 2.66E-53 | -1.69E-46 |
| MS.gene049396 | MS.gene09865 | 0.844742 | 6.26E-59 | -1.69E-46 |
| MS.gene049609 | MS.gene09865 | 0.816414 | 5.60E-52 | -1.69E-46 |
| MS.gene049633 | MS.gene09865 | 0.851607 | 7.95E-61 | -1.69E-46 |
| MS.gene05010 | MS.gene09865 | 0.834204 | 3.43E-56 | -1.69E-46 |
| MS.gene050170 | MS.gene09865 | 0.913141 | 8.68E-84 | -1.69E-46 |
| MS.gene050216 | MS.gene09865 | 0.809685 | 1.67E-50 | -1.69E-46 |
| MS.gene050323 | MS.gene09865 | 0.910309 | 2.16E-82 | -1.69E-46 |
| MS.gene050338 | MS.gene09865 | -0.814597 | 1.42E-51 | -1.69E-46 |
| MS.gene050496 | MS.gene09865 | 0.900547 | 6.57E-78 | -1.69E-46 |
| MS.gene050502 | MS.gene09865 | 0.865409 | 6.03E-65 | -1.69E-46 |
| MS.gene050504 | MS.gene09865 | 0.831662 | 1.47E-55 | -1.69E-46 |
| MS.gene050518 | MS.gene09865 | 0.800057 | 1.72E-48 | -1.69E-46 |
| MS.gene050577 | MS.gene09865 | 0.832423 | 9.54E-56 | -1.69E-46 |
| MS.gene050612 | MS.gene09865 | 0.820312 | 7.33E-53 | -1.69E-46 |
| MS.gene050662 | MS.gene09865 | 0.807833 | 4.17E-50 | -1.69E-46 |
| MS.gene050675 | MS.gene09865 | 0.829643 | 4.59E-55 | -1.69E-46 |
| MS.gene050697 | MS.gene09865 | 0.885203 | 9.96E-72 | -1.69E-46 |
| MS.gene050699 | MS.gene09865 | 0.806137 | 9.52E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene09865 | 0.810653 | 1.04E-50 | -1.69E-46 |
| MS.gene050772 | MS.gene09865 | 0.830338 | 3.11E-55 | -1.69E-46 |
| MS.gene05080 | MS.gene09865 | 0.847472 | 1.13E-59 | -1.69E-46 |
| MS.gene050868 | MS.gene09865 | 0.885582 | 7.18E-72 | -1.69E-46 |
| MS.gene050871 | MS.gene09865 | 0.886253 | 4.02E-72 | -1.69E-46 |
| MS.gene050904 | MS.gene09865 | 0.819681 | 1.02E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene09865 | 0.804117 | 2.52E-49 | -1.69E-46 |
| MS.gene050986 | MS.gene09865 | 0.821189 | 4.61E-53 | -1.69E-46 |
| MS.gene051268 | MS.gene09865 | 0.8569 | 2.35E-62 | -1.69E-46 |
| MS.gene051317 | MS.gene09865 | 0.808777 | 2.62E-50 | -1.69E-46 |
| MS.gene051551 | MS.gene09865 | 0.802516 | 5.41E-49 | -1.69E-46 |
| MS.gene051838 | MS.gene09865 | 0.850171 | 2.02E-60 | -1.69E-46 |
| MS.gene051874 | MS.gene09865 | 0.80769 | 4.47E-50 | -1.69E-46 |
| MS.gene051941 | MS.gene09865 | 0.845544 | 3.80E-59 | -1.69E-46 |
| MS.gene052066 | MS.gene09865 | 0.833845 | 4.22E-56 | -1.69E-46 |
| MS.gene052164 | MS.gene09865 | 0.863884 | 1.81E-64 | -1.69E-46 |
| MS.gene052346 | MS.gene09865 | 0.806725 | 7.15E-50 | -1.69E-46 |
| MS.gene052482 | MS.gene09865 | 0.833405 | 5.43E-56 | -1.69E-46 |
| MS.gene052486 | MS.gene09865 | 0.832654 | 8.36E-56 | -1.69E-46 |
| MS.gene052503 | MS.gene09865 | 0.852826 | 3.58E-61 | -1.69E-46 |
| MS.gene052504 | MS.gene09865 | 0.827836 | 1.26E-54 | -1.69E-46 |
| MS.gene052506 | MS.gene09865 | 0.856142 | 3.93E-62 | -1.69E-46 |
| MS.gene052822 | MS.gene09865 | 0.856877 | 2.39E-62 | -1.69E-46 |
| MS.gene052823 | MS.gene09865 | 0.854026 | 1.62E-61 | -1.69E-46 |
| MS.gene052825 | MS.gene09865 | 0.850191 | 1.99E-60 | -1.69E-46 |
| MS.gene052966 | MS.gene09865 | 0.850755 | 1.38E-60 | -1.69E-46 |
| MS.gene052987 | MS.gene09865 | 0.807162 | 5.78E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene09865 | 0.851869 | 6.70E-61 | -1.69E-46 |
| MS.gene053286 | MS.gene09865 | 0.801135 | 1.04E-48 | -1.69E-46 |
| MS.gene053436 | MS.gene09865 | 0.808359 | 3.22E-50 | -1.69E-46 |
| MS.gene053479 | MS.gene09865 | 0.829933 | 3.90E-55 | -1.69E-46 |
| MS.gene053480 | MS.gene09865 | 0.833791 | 4.35E-56 | -1.69E-46 |
| MS.gene053574 | MS.gene09865 | 0.84215 | 3.08E-58 | -1.69E-46 |
| MS.gene053626 | MS.gene09865 | 0.84581 | 3.22E-59 | -1.69E-46 |
| MS.gene053633 | MS.gene09865 | 0.863836 | 1.87E-64 | -1.69E-46 |
| MS.gene053824 | MS.gene09865 | 0.864251 | 1.39E-64 | -1.69E-46 |
| MS.gene053916 | MS.gene09865 | 0.82404 | 1.00E-53 | -1.69E-46 |
| MS.gene054003 | MS.gene09865 | 0.828091 | 1.09E-54 | -1.69E-46 |
| MS.gene054344 | MS.gene09865 | 0.814033 | 1.89E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene09865 | 0.8437 | 1.19E-58 | -1.69E-46 |
| MS.gene054706 | MS.gene09865 | -0.8183 | 2.11E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene09865 | 0.837283 | 5.69E-57 | -1.69E-46 |
| MS.gene05494 | MS.gene09865 | 0.822864 | 1.89E-53 | -1.69E-46 |
| MS.gene054954 | MS.gene09865 | 0.8493 | 3.53E-60 | -1.69E-46 |
| MS.gene055224 | MS.gene09865 | 0.81749 | 3.21E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene09865 | 0.820441 | 6.85E-53 | -1.69E-46 |
| MS.gene055502 | MS.gene09865 | 0.825698 | 4.07E-54 | -1.69E-46 |
| MS.gene055577 | MS.gene09865 | 0.850818 | 1.33E-60 | -1.69E-46 |
| MS.gene055722 | MS.gene09865 | 0.805463 | 1.32E-49 | -1.69E-46 |
| MS.gene055748 | MS.gene09865 | 0.827032 | 1.96E-54 | -1.69E-46 |
| MS.gene055750 | MS.gene09865 | 0.8553 | 6.92E-62 | -1.69E-46 |
| MS.gene055751 | MS.gene09865 | 0.840454 | 8.61E-58 | -1.69E-46 |
| MS.gene055776 | MS.gene09865 | 0.834003 | 3.85E-56 | -1.69E-46 |
| MS.gene05589 | MS.gene09865 | 0.897264 | 1.66E-76 | -1.69E-46 |
| MS.gene055941 | MS.gene09865 | 0.814897 | 1.22E-51 | -1.69E-46 |
| MS.gene056046 | MS.gene09865 | 0.880573 | 4.91E-70 | -1.69E-46 |
| MS.gene056166 | MS.gene09865 | 0.835891 | 1.29E-56 | -1.69E-46 |
| MS.gene056387 | MS.gene09865 | 0.888092 | 8.02E-73 | -1.69E-46 |
| MS.gene056446 | MS.gene09865 | 0.818416 | 1.98E-52 | -1.69E-46 |
| MS.gene056487 | MS.gene09865 | 0.814347 | 1.61E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene09865 | 0.898822 | 3.64E-77 | -1.69E-46 |
| MS.gene056510 | MS.gene09865 | 0.859698 | 3.45E-63 | -1.69E-46 |
| MS.gene056657 | MS.gene09865 | 0.83207 | 1.17E-55 | -1.69E-46 |
| MS.gene056878 | MS.gene09865 | 0.816411 | 5.61E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene09865 | 0.840513 | 8.31E-58 | -1.69E-46 |
| MS.gene057086 | MS.gene09865 | 0.840356 | 9.14E-58 | -1.69E-46 |
| MS.gene057687 | MS.gene09865 | 0.80059 | 1.34E-48 | -1.69E-46 |
| MS.gene057734 | MS.gene09865 | 0.829779 | 4.25E-55 | -1.69E-46 |
| MS.gene057856 | MS.gene09865 | 0.815316 | 9.84E-52 | -1.69E-46 |
| MS.gene057857 | MS.gene09865 | 0.845131 | 4.92E-59 | -1.69E-46 |
| MS.gene05787 | MS.gene09865 | 0.846263 | 2.42E-59 | -1.69E-46 |
| MS.gene058157 | MS.gene09865 | 0.854402 | 1.26E-61 | -1.69E-46 |
| MS.gene058334 | MS.gene09865 | -0.822896 | 1.85E-53 | -1.69E-46 |
| MS.gene058338 | MS.gene09865 | 0.827107 | 1.88E-54 | -1.69E-46 |
| MS.gene05837 | MS.gene09865 | 0.826264 | 2.98E-54 | -1.69E-46 |
| MS.gene058382 | MS.gene09865 | -0.825263 | 5.16E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene09865 | 0.818511 | 1.89E-52 | -1.69E-46 |
| MS.gene058838 | MS.gene09865 | 0.841427 | 4.78E-58 | -1.69E-46 |
| MS.gene059022 | MS.gene09865 | 0.815355 | 9.65E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene09865 | 0.844262 | 8.43E-59 | -1.69E-46 |
| MS.gene05913 | MS.gene09865 | 0.843624 | 1.25E-58 | -1.69E-46 |
| MS.gene059367 | MS.gene09865 | 0.84186 | 3.68E-58 | -1.69E-46 |
| MS.gene059667 | MS.gene09865 | 0.851078 | 1.12E-60 | -1.69E-46 |
| MS.gene059699 | MS.gene09865 | -0.829051 | 6.39E-55 | -1.69E-46 |
| MS.gene059701 | MS.gene09865 | -0.800997 | 1.11E-48 | -1.69E-46 |
| MS.gene059703 | MS.gene09865 | -0.845349 | 4.29E-59 | -1.69E-46 |
| MS.gene059718 | MS.gene09865 | 0.834459 | 2.96E-56 | -1.69E-46 |
| MS.gene059837 | MS.gene09865 | 0.835172 | 1.96E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene09865 | 0.875805 | 2.31E-68 | -1.69E-46 |
| MS.gene05995 | MS.gene09865 | 0.827382 | 1.61E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene09865 | 0.817652 | 2.95E-52 | -1.69E-46 |
| MS.gene06000 | MS.gene09865 | 0.891087 | 5.47E-74 | -1.69E-46 |
| MS.gene06027 | MS.gene09865 | 0.823321 | 1.47E-53 | -1.69E-46 |
| MS.gene060482 | MS.gene09865 | 0.824963 | 6.07E-54 | -1.69E-46 |
| MS.gene060595 | MS.gene09865 | -0.814509 | 1.49E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene09865 | 0.827126 | 1.86E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene09865 | 0.836885 | 7.20E-57 | -1.69E-46 |
| MS.gene060778 | MS.gene09865 | 0.902036 | 1.46E-78 | -1.69E-46 |
| MS.gene06077 | MS.gene09865 | 0.834946 | 2.23E-56 | -1.69E-46 |
| MS.gene060835 | MS.gene09865 | 0.82234 | 2.50E-53 | -1.69E-46 |
| MS.gene06097 | MS.gene09865 | 0.850467 | 1.67E-60 | -1.69E-46 |
| MS.gene060982 | MS.gene09865 | 0.900526 | 6.71E-78 | -1.69E-46 |
| MS.gene061044 | MS.gene09865 | -0.813988 | 1.94E-51 | -1.69E-46 |
| MS.gene061218 | MS.gene09865 | 0.838272 | 3.17E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09865.t1 | MTR_7g099710 | 95.421 | 677 | 31 | 0 | 49 | 725 | 137 | 813 | 0.0 | 1341 |
| MS.gene09865.t1 | MTR_2g096670 | 36.432 | 667 | 402 | 6 | 49 | 709 | 142 | 792 | 1.43e-140 | 432 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09865.t1 | AT3G09450 | 37.209 | 645 | 369 | 12 | 67 | 698 | 150 | 771 | 3.26e-132 | 410 |
| MS.gene09865.t1 | AT2G28780 | 33.188 | 687 | 422 | 10 | 49 | 723 | 133 | 794 | 9.87e-121 | 380 |
Find 151 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAAAGATTTGTGGATTTA+AGG | 0.118879 | 7.3:-12833219 | MS.gene09865:CDS |
| CTGAAATGGAGCCAAATTTC+TGG | 0.203476 | 7.3:-12832793 | MS.gene09865:CDS |
| AAATCTTGCAGTTTCTCTTC+TGG | 0.237975 | 7.3:+12833838 | None:intergenic |
| AAATAAAAGAACTACTTATA+TGG | 0.256780 | 7.3:-12832265 | MS.gene09865:CDS |
| CGTCAACAAGTGTGTCGATT+TGG | 0.272339 | 7.3:+12836433 | None:intergenic |
| GCAATGTCCATCCCTCTTAT+TGG | 0.275470 | 7.3:+12833808 | None:intergenic |
| TTGAAGTTTGTTTGACTTGC+GGG | 0.279387 | 7.3:+12832236 | None:intergenic |
| TATAGTACCCCGACTCAATT+TGG | 0.282417 | 7.3:-12833076 | MS.gene09865:CDS |
| ACCTTAAATCCACAAATCTT+TGG | 0.287928 | 7.3:+12833218 | None:intergenic |
| AGTAGAATGTATGGGGAATC+TGG | 0.291832 | 7.3:-12833148 | MS.gene09865:CDS |
| AATCTTGCAGTTTCTCTTCT+GGG | 0.294105 | 7.3:+12833839 | None:intergenic |
| AATGGTACGAACCAGAAATT+TGG | 0.300415 | 7.3:+12832782 | None:intergenic |
| AGAAGAGAAACTGCAAGATT+TGG | 0.304292 | 7.3:-12833836 | MS.gene09865:CDS |
| GGGCAATTTCGACAGTTATA+GGG | 0.304373 | 7.3:-12833126 | MS.gene09865:CDS |
| ATCTCAATGCAGACACATTT+AGG | 0.311938 | 7.3:-12832475 | MS.gene09865:CDS |
| GGGGCAATTTCGACAGTTAT+AGG | 0.317765 | 7.3:-12833127 | MS.gene09865:CDS |
| ATGATAGGGATAATGCATAT+TGG | 0.349199 | 7.3:-12833363 | MS.gene09865:CDS |
| TGGAGCTATAGCTTCTGTTC+TGG | 0.352610 | 7.3:-12836298 | MS.gene09865:CDS |
| GCTGCGCTGGCAGTGGCTAC+CGG | 0.363670 | 7.3:-12836476 | MS.gene09865:intron |
| GAACAAAACATTTAGCTTGC+TGG | 0.368168 | 7.3:+12833689 | None:intergenic |
| CAAACGCTCGCTGAGCTTGT+TGG | 0.371401 | 7.3:+12833474 | None:intergenic |
| TCCTGTTGTGGAGAGGTACT+TGG | 0.379008 | 7.3:+12834076 | None:intergenic |
| GTCAACAAGTGTGTCGATTT+GGG | 0.380204 | 7.3:+12836434 | None:intergenic |
| AAGCATCTCCTCATCTTTGT+TGG | 0.382037 | 7.3:+12832370 | None:intergenic |
| CAATCTGCTTAATGCAATCT+TGG | 0.385334 | 7.3:+12832930 | None:intergenic |
| CCAGTGTAGTTGTGATACTA+TGG | 0.386508 | 7.3:+12834042 | None:intergenic |
| GCTAGAGTTGCAGCTCTTGA+GGG | 0.389237 | 7.3:+12832986 | None:intergenic |
| TCCTTGGTTTGATATATGAT+AGG | 0.391420 | 7.3:-12833378 | MS.gene09865:CDS |
| TTTAAGTCCTCTCTGTCATT+AGG | 0.398749 | 7.3:-12833412 | MS.gene09865:CDS |
| TTAGGCTTTGCCGTGTTCCT+TGG | 0.401857 | 7.3:-12833394 | MS.gene09865:CDS |
| CTCAGGCAAAGTAGAATGTA+TGG | 0.402439 | 7.3:-12833157 | MS.gene09865:CDS |
| TGATAGGGATAATGCATATT+GGG | 0.402750 | 7.3:-12833362 | MS.gene09865:CDS |
| ATTTACAGCAGAAGCTGAAA+TGG | 0.417428 | 7.3:-12832807 | MS.gene09865:CDS |
| GTGACGCCGTTAGAGGTTGT+TGG | 0.421688 | 7.3:-12836586 | MS.gene09865:CDS |
| ACACTTGGTGACGCCGTTAG+AGG | 0.424878 | 7.3:-12836593 | MS.gene09865:CDS |
| TATTTCTCTCATCAAGCTAC+TGG | 0.426451 | 7.3:+12832304 | None:intergenic |
| AAAGATCAAGCTTTGGTGGC+TGG | 0.427921 | 7.3:+12833438 | None:intergenic |
| TCCTCATCAATAACACCAAC+AGG | 0.430311 | 7.3:+12833763 | None:intergenic |
| GTTGCAAACGCACGAGGAAC+AGG | 0.431175 | 7.3:-12833286 | MS.gene09865:CDS |
| TGCTAGAGTTGCAGCTCTTG+AGG | 0.437675 | 7.3:+12832985 | None:intergenic |
| CGACACACTTGTTGACGAAA+AGG | 0.437706 | 7.3:-12836427 | MS.gene09865:CDS |
| GCCAAGTACCTCTCCACAAC+AGG | 0.438296 | 7.3:-12834077 | MS.gene09865:CDS |
| GAGCTTGTTGGAGCTACATT+GGG | 0.441738 | 7.3:+12833486 | None:intergenic |
| GACGACGTATCTCTTTCGTT+AGG | 0.445242 | 7.3:+12832896 | None:intergenic |
| TGCCCCAATATTGAAAAGCT+TGG | 0.446043 | 7.3:-12832585 | MS.gene09865:CDS |
| TGAGTTGTGGTTGCATCAAA+AGG | 0.447219 | 7.3:+12833667 | None:intergenic |
| TGCTGCCCCTGCCCTATCCT+CGG | 0.456066 | 7.3:-12836269 | MS.gene09865:CDS |
| AATAAAAGAACTACTTATAT+GGG | 0.456542 | 7.3:-12832264 | MS.gene09865:CDS |
| AAGATCAAGCTTTGGTGGCT+GGG | 0.457294 | 7.3:+12833439 | None:intergenic |
| TTGACGAAAAGGATTGCATA+TGG | 0.458789 | 7.3:-12836416 | MS.gene09865:CDS |
| CCTTGGTTTGATATATGATA+GGG | 0.460011 | 7.3:-12833377 | MS.gene09865:CDS |
| ATAGGGGCCTTGTTGATCCT+TGG | 0.460671 | 7.3:-12833109 | MS.gene09865:CDS |
| TAGCAACTCCAAATTGAGTC+GGG | 0.464180 | 7.3:+12833068 | None:intergenic |
| CTGTAGCAGGTAGTATGAAA+TGG | 0.464656 | 7.3:+12832764 | None:intergenic |
| TCAATTTGGAGTTGCTAGAA+TGG | 0.465771 | 7.3:-12833062 | MS.gene09865:CDS |
| GTGGCTTGTTCCACTGCACT+TGG | 0.469029 | 7.3:-12836318 | MS.gene09865:CDS |
| TAAATGCAAAGATCAAGCTT+TGG | 0.470566 | 7.3:+12833431 | None:intergenic |
| GAGTTGGAAATTATTGTTTG+AGG | 0.472419 | 7.3:+12833874 | None:intergenic |
| TACCTGCTACAGCAATATGC+TGG | 0.475447 | 7.3:-12832753 | MS.gene09865:CDS |
| ACGACGTATCTCTTTCGTTA+GGG | 0.475646 | 7.3:+12832897 | None:intergenic |
| AATGGAGCATGTCTCACAAT+TGG | 0.477649 | 7.3:-12832684 | MS.gene09865:CDS |
| TGGGTCAATGCAACAAGAGT+TGG | 0.479221 | 7.3:+12833858 | None:intergenic |
| GAGATTAAATTGCAATATAG+AGG | 0.485208 | 7.3:-12834147 | MS.gene09865:CDS |
| GGTTCTTAGCTCTTATACCA+TGG | 0.486589 | 7.3:-12833198 | MS.gene09865:CDS |
| GTAGAATGTATGGGGAATCT+GGG | 0.489062 | 7.3:-12833147 | MS.gene09865:CDS |
| GATTTGGAAATACCAATAAG+AGG | 0.489960 | 7.3:-12833820 | MS.gene09865:CDS |
| CAACATCTAGAGGAAATTGC+TGG | 0.490184 | 7.3:-12832404 | MS.gene09865:CDS |
| TGAGCTTGTTGGAGCTACAT+TGG | 0.496289 | 7.3:+12833485 | None:intergenic |
| TGAGTTGTCTGAGGCTGAGA+TGG | 0.496938 | 7.3:+12834124 | None:intergenic |
| AGTGGCTACCGGTGCATTTG+TGG | 0.499348 | 7.3:-12836465 | MS.gene09865:CDS |
| ATGCAAAGATCAAGCTTTGG+TGG | 0.499399 | 7.3:+12833434 | None:intergenic |
| ATGTAAGCAAACCGAGGATA+GGG | 0.500818 | 7.3:+12836258 | None:intergenic |
| AAAACAGGATGGCATGCATT+GGG | 0.501602 | 7.3:-12833902 | MS.gene09865:intron |
| AGAATGGCAGAGGCTACAAT+AGG | 0.502981 | 7.3:-12833046 | MS.gene09865:CDS |
| GATATTGAACAGAGATGAAG+AGG | 0.505008 | 7.3:-12832453 | MS.gene09865:CDS |
| TCCTCGGTTTGCTTACATTG+AGG | 0.507319 | 7.3:-12836253 | MS.gene09865:intron |
| CAGCAATTTCCTCTAGATGT+TGG | 0.511945 | 7.3:+12832405 | None:intergenic |
| TTTGAAGTTTGTTTGACTTG+CGG | 0.514256 | 7.3:+12832235 | None:intergenic |
| TCCCAGCATATTGCTGTAGC+AGG | 0.515445 | 7.3:+12832751 | None:intergenic |
| ACGAGGAACAGGAACAGCTA+TGG | 0.522977 | 7.3:-12833275 | MS.gene09865:CDS |
| AATGTAAGCAAACCGAGGAT+AGG | 0.523686 | 7.3:+12836257 | None:intergenic |
| ACAGCTATGGGATCAATCTA+CGG | 0.523889 | 7.3:-12833262 | MS.gene09865:CDS |
| CAATTTCCTCTAGATGTTGG+AGG | 0.527126 | 7.3:+12832408 | None:intergenic |
| TGGATGGATATTCAAGGTCA+AGG | 0.528602 | 7.3:-12832641 | MS.gene09865:CDS |
| TCAGACAACTCAACTGCTGT+TGG | 0.529606 | 7.3:-12834113 | MS.gene09865:CDS |
| TCCTGTTGGTGTTATTGATG+AGG | 0.529816 | 7.3:-12833764 | MS.gene09865:CDS |
| TTGTTTCATTTCTTGAGTTG+TGG | 0.530301 | 7.3:+12833654 | None:intergenic |
| ATTGCAATTAGTTTCGTGAC+TGG | 0.533410 | 7.3:-12833328 | MS.gene09865:CDS |
| GAACAAGCCACATGAATTGA+AGG | 0.535382 | 7.3:+12836330 | None:intergenic |
| ATGTATTCTCAATGTATAGT+TGG | 0.537132 | 7.3:+12834174 | None:intergenic |
| CTCTTTCCTCCAACATCTAG+AGG | 0.537612 | 7.3:-12832414 | MS.gene09865:CDS |
| GTTCTTAGCTCTTATACCAT+GGG | 0.540055 | 7.3:-12833197 | MS.gene09865:CDS |
| ATAGGGCAGGGGCAGCAACA+TGG | 0.541183 | 7.3:+12836275 | None:intergenic |
| CGAGGAACAGGAACAGCTAT+GGG | 0.541244 | 7.3:-12833274 | MS.gene09865:CDS |
| GAGAAGCTTGGCTCCTGTTG+TGG | 0.542438 | 7.3:+12834064 | None:intergenic |
| TATTCTCAATGTATAGTTGG+TGG | 0.542668 | 7.3:+12834177 | None:intergenic |
| GGCAATTTCGACAGTTATAG+GGG | 0.544984 | 7.3:-12833125 | MS.gene09865:CDS |
| TGTGATACTATGGAGAAGCT+TGG | 0.546804 | 7.3:+12834052 | None:intergenic |
| CTAGAGTTGCAGCTCTTGAG+GGG | 0.547420 | 7.3:+12832987 | None:intergenic |
| GCAATCTTGGAGTGTTCTGA+AGG | 0.547626 | 7.3:+12832943 | None:intergenic |
| TCAGGCAAAGTAGAATGTAT+GGG | 0.550366 | 7.3:-12833156 | MS.gene09865:CDS |
| GTAATTTGGATGGATATTCA+AGG | 0.552135 | 7.3:-12832647 | MS.gene09865:CDS |
| ATATGCTGGGATCTCTATCA+AGG | 0.556800 | 7.3:-12832739 | MS.gene09865:CDS |
| AAAAGATGGAGTAATTTGGA+TGG | 0.561145 | 7.3:-12832657 | MS.gene09865:CDS |
| AAGCAAACCGAGGATAGGGC+AGG | 0.561371 | 7.3:+12836262 | None:intergenic |
| CAGCTATGGGATCAATCTAC+GGG | 0.561809 | 7.3:-12833261 | MS.gene09865:CDS |
| AGGGATAATGCATATTGGGC+GGG | 0.562602 | 7.3:-12833358 | MS.gene09865:CDS |
| TGGAGTTGCTAGAATGGCAG+AGG | 0.563730 | 7.3:-12833056 | MS.gene09865:CDS |
| GGATGGATATTCAAGGTCAA+GGG | 0.566079 | 7.3:-12832640 | MS.gene09865:CDS |
| GGGCCTTGTTGATCCTTGGT+AGG | 0.569678 | 7.3:-12833105 | MS.gene09865:CDS |
| CTAGCAACTCCAAATTGAGT+CGG | 0.575057 | 7.3:+12833067 | None:intergenic |
| ACCTGCTACAGCAATATGCT+GGG | 0.575756 | 7.3:-12832752 | MS.gene09865:CDS |
| CGACGTATCTCTTTCGTTAG+GGG | 0.576170 | 7.3:+12832898 | None:intergenic |
| GTTATACATGGTGCACAAGA+AGG | 0.578194 | 7.3:-12836363 | MS.gene09865:CDS |
| TAGATTTACTATGTTTGCAG+AGG | 0.581958 | 7.3:+12832191 | None:intergenic |
| AACATGCCAACAACCTCTAA+CGG | 0.582906 | 7.3:+12836580 | None:intergenic |
| TTGAAATAGACAAGTCATCT+CGG | 0.590293 | 7.3:+12833554 | None:intergenic |
| AGCAAACCGAGGATAGGGCA+GGG | 0.590590 | 7.3:+12836263 | None:intergenic |
| GCAAACCGAGGATAGGGCAG+GGG | 0.590989 | 7.3:+12836264 | None:intergenic |
| ATTTGGAAATACCAATAAGA+GGG | 0.595637 | 7.3:-12833819 | MS.gene09865:CDS |
| CAGCGCCACCACAAATGCAC+CGG | 0.599257 | 7.3:+12836457 | None:intergenic |
| AGCTATAGCTCCAAGTGCAG+TGG | 0.600339 | 7.3:+12836308 | None:intergenic |
| GGAAATACCAATAAGAGGGA+TGG | 0.600471 | 7.3:-12833815 | MS.gene09865:CDS |
| TCTTTCGTTAGGGGTAGTCA+TGG | 0.603069 | 7.3:+12832907 | None:intergenic |
| TGAAGTTTGTTTGACTTGCG+GGG | 0.604383 | 7.3:+12832237 | None:intergenic |
| GGCTACGCCTTCAATTCATG+TGG | 0.612474 | 7.3:-12836337 | MS.gene09865:CDS |
| GCGTTTGCAACTGAGAATGT+TGG | 0.613666 | 7.3:+12833298 | None:intergenic |
| CCCTATCATATATCAAACCA+AGG | 0.614752 | 7.3:+12833377 | None:intergenic |
| ATGGACATTGCTCTATCAAG+TGG | 0.617499 | 7.3:-12833796 | MS.gene09865:CDS |
| TACTATAGTTCTTCCTACCA+AGG | 0.620979 | 7.3:+12833092 | None:intergenic |
| CCATAGTATCACAACTACAC+TGG | 0.621214 | 7.3:-12834042 | MS.gene09865:intron |
| TATGTCAGCACAGTTATACA+TGG | 0.621877 | 7.3:-12836375 | MS.gene09865:CDS |
| CAGGCAAAGTAGAATGTATG+GGG | 0.624002 | 7.3:-12833155 | MS.gene09865:CDS |
| GGCTACCGGTGCATTTGTGG+TGG | 0.628149 | 7.3:-12836462 | MS.gene09865:CDS |
| AACTCTTACCAACAAAGATG+AGG | 0.633114 | 7.3:-12832378 | MS.gene09865:CDS |
| TCTTGTGACTCGAGATCGTG+AGG | 0.636201 | 7.3:+12832500 | None:intergenic |
| GCTTGGCTCCTGTTGTGGAG+AGG | 0.637405 | 7.3:+12834069 | None:intergenic |
| ACATGGTGCACAAGAAGGAG+TGG | 0.641976 | 7.3:-12836358 | MS.gene09865:CDS |
| TTCTCAGTTGCAAACGCACG+AGG | 0.643217 | 7.3:-12833292 | MS.gene09865:CDS |
| GTTATTGATGAGGAGCTAAG+AGG | 0.643274 | 7.3:-12833754 | MS.gene09865:CDS |
| AAAGAAGAGAAAATGACCCA+TGG | 0.647913 | 7.3:+12833181 | None:intergenic |
| TAGGGATAATGCATATTGGG+CGG | 0.652201 | 7.3:-12833359 | MS.gene09865:CDS |
| ATATATCAAACCAAGGAACA+CGG | 0.652287 | 7.3:+12833384 | None:intergenic |
| AACAGCAGTTGAGTTGTCTG+AGG | 0.659969 | 7.3:+12834115 | None:intergenic |
| GCTGGGATCTCTATCAAGGA+CGG | 0.660564 | 7.3:-12832735 | MS.gene09865:CDS |
| CTTCCTACCAAGGATCAACA+AGG | 0.665051 | 7.3:+12833102 | None:intergenic |
| TAGAATGTATGGGGAATCTG+GGG | 0.673349 | 7.3:-12833146 | MS.gene09865:CDS |
| AGCAACTCCAAATTGAGTCG+GGG | 0.676322 | 7.3:+12833069 | None:intergenic |
| GTGTTGTCTGATGGAACACT+TGG | 0.689623 | 7.3:-12836608 | None:intergenic |
| ACCTCAATGTAAGCAAACCG+AGG | 0.693462 | 7.3:+12836252 | None:intergenic |
| GGCAAAGCCTAATGACAGAG+AGG | 0.719901 | 7.3:+12833405 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACACAAAAAAAAAAAAAAA+AGG | + | chr7.3:12832984-12833003 | None:intergenic | 10.0% |
| !! | TATATTTAAAAACTTAAATC+TGG | - | chr7.3:12833724-12833743 | MS.gene09865:CDS | 10.0% |
| !!! | AAATAATACCTTTAAAAAAA+AGG | - | chr7.3:12833395-12833414 | MS.gene09865:CDS | 10.0% |
| !!! | AATAATACCTTTAAAAAAAA+GGG | - | chr7.3:12833396-12833415 | MS.gene09865:CDS | 10.0% |
| !!! | ATTCATTTTAATGATTAAAT+TGG | + | chr7.3:12833624-12833643 | None:intergenic | 10.0% |
| !!! | TATTTTACAAAAATTATTGA+AGG | + | chr7.3:12833592-12833611 | None:intergenic | 10.0% |
| !! | AAATAAAAGAACTACTTATA+TGG | - | chr7.3:12836532-12836551 | MS.gene09865:intron | 15.0% |
| !! | AATAAAAGAACTACTTATAT+GGG | - | chr7.3:12836533-12836552 | MS.gene09865:intron | 15.0% |
| !! | ATTGAATAAAAATGATCTTA+TGG | + | chr7.3:12832910-12832929 | None:intergenic | 15.0% |
| !!! | AAAAAAAAGTTTTTTTGAAC+AGG | + | chr7.3:12832788-12832807 | None:intergenic | 15.0% |
| !!! | ATAATACCTTTAAAAAAAAG+GGG | - | chr7.3:12833397-12833416 | MS.gene09865:CDS | 15.0% |
| !!! | TAGATTTAATTTGAGAAAAT+AGG | - | chr7.3:12834234-12834253 | MS.gene09865:intron | 15.0% |
| !!! | TTTTTTATAAAAAAACAGGA+TGG | - | chr7.3:12834884-12834903 | MS.gene09865:intron | 15.0% |
| !!! | TTTTTTTTTTTTTGTTGAAG+TGG | - | chr7.3:12832635-12832654 | MS.gene09865:CDS | 15.0% |
| !! | AGTATAAAAAGAATGATGTT+GGG | + | chr7.3:12835210-12835229 | None:intergenic | 20.0% |
| !! | CAATGCCTAATATAATAATT+TGG | + | chr7.3:12834080-12834099 | None:intergenic | 20.0% |
| !! | CATCCAATAATGTATTATTA+CGG | - | chr7.3:12834468-12834487 | MS.gene09865:intron | 20.0% |
| !! | TAACATTGCATGTAAATTAA+AGG | + | chr7.3:12834426-12834445 | None:intergenic | 20.0% |
| !! | TGTAAATTAAAGGAGTTTAA+TGG | + | chr7.3:12834416-12834435 | None:intergenic | 20.0% |
| !! | TTAAAATGAGAAGCTATTTA+CGG | - | chr7.3:12832876-12832895 | MS.gene09865:CDS | 20.0% |
| !!! | AAAAACTTAAATCTGGAATT+TGG | - | chr7.3:12833731-12833750 | MS.gene09865:CDS | 20.0% |
| !!! | AAAATCTTTGTTTTTTTGAC+TGG | - | chr7.3:12834017-12834036 | MS.gene09865:intron | 20.0% |
| !!! | AATCACAATTTAGAATAAAC+AGG | - | chr7.3:12832680-12832699 | MS.gene09865:CDS | 20.0% |
| !!! | ATTATTGCTATTGTTATGAT+CGG | - | chr7.3:12833264-12833283 | MS.gene09865:CDS | 20.0% |
| !!! | TAATACCTTTAAAAAAAAGG+GGG | - | chr7.3:12833398-12833417 | MS.gene09865:CDS | 20.0% |
| !!! | TTAGTTGGATTGTTTTTAAT+CGG | + | chr7.3:12833939-12833958 | None:intergenic | 20.0% |
| ! | AACTTCTGTAATACTATATG+TGG | + | chr7.3:12834155-12834174 | None:intergenic | 25.0% |
| ! | AATTATGTCAATTCAAACGT+TGG | + | chr7.3:12833684-12833703 | None:intergenic | 25.0% |
| ! | AGAAAAAATCATAACCTGAA+TGG | + | chr7.3:12832253-12832272 | None:intergenic | 25.0% |
| ! | AGAAACAAATTGACATTAGT+TGG | + | chr7.3:12833954-12833973 | None:intergenic | 25.0% |
| ! | AGGGGGAATAATAATATATT+TGG | - | chr7.3:12833415-12833434 | MS.gene09865:CDS | 25.0% |
| ! | ATGCCGTAATAATACATTAT+TGG | + | chr7.3:12834474-12834493 | None:intergenic | 25.0% |
| ! | ATGTATTCTCAATGTATAGT+TGG | + | chr7.3:12834626-12834645 | None:intergenic | 25.0% |
| ! | ATTTGGAAATACCAATAAGA+GGG | - | chr7.3:12834978-12834997 | MS.gene09865:intron | 25.0% |
| ! | CAGTATAAAAAGAATGATGT+TGG | + | chr7.3:12835211-12835230 | None:intergenic | 25.0% |
| ! | CGCAACCAAATTATTATATT+AGG | - | chr7.3:12834072-12834091 | MS.gene09865:CDS | 25.0% |
| ! | GAATTATTATGCTAAGTGAT+GGG | + | chr7.3:12833889-12833908 | None:intergenic | 25.0% |
| ! | GAGATTAAATTGCAATATAG+AGG | - | chr7.3:12834650-12834669 | MS.gene09865:intron | 25.0% |
| ! | TCAATCATAAAGATGTTGAT+TGG | + | chr7.3:12833480-12833499 | None:intergenic | 25.0% |
| ! | TTACTTGCATCAAATTATAC+AGG | + | chr7.3:12833995-12834014 | None:intergenic | 25.0% |
| ! | TTTATGACACTTTCAAAATG+TGG | - | chr7.3:12833372-12833391 | MS.gene09865:CDS | 25.0% |
| !! | AAAGTGTGCTTTTAATATCT+TGG | + | chr7.3:12834569-12834588 | None:intergenic | 25.0% |
| !!! | TTATTCCCCCTTTTTTTTAA+AGG | + | chr7.3:12833406-12833425 | None:intergenic | 25.0% |
| !!! | TTTTATTTCACTCTCAATCT+TGG | + | chr7.3:12836520-12836539 | None:intergenic | 25.0% |
| AAAAGATGGAGTAATTTGGA+TGG | - | chr7.3:12836140-12836159 | MS.gene09865:intron | 30.0% | |
| ACCTTAAATCCACAAATCTT+TGG | + | chr7.3:12835582-12835601 | None:intergenic | 30.0% | |
| ATATATCAAACCAAGGAACA+CGG | + | chr7.3:12835416-12835435 | None:intergenic | 30.0% | |
| ATGATAGGGATAATGCATAT+TGG | - | chr7.3:12835434-12835453 | MS.gene09865:intron | 30.0% | |
| CACAAAAAGATGGAGTAATT+TGG | - | chr7.3:12836136-12836155 | MS.gene09865:intron | 30.0% | |
| CGAATTATTATGCTAAGTGA+TGG | + | chr7.3:12833890-12833909 | None:intergenic | 30.0% | |
| GAAGCAAATTAAGTGATCTT+AGG | - | chr7.3:12832734-12832753 | MS.gene09865:CDS | 30.0% | |
| GAGTTGGAAATTATTGTTTG+AGG | + | chr7.3:12834926-12834945 | None:intergenic | 30.0% | |
| GATTTGGAAATACCAATAAG+AGG | - | chr7.3:12834977-12834996 | MS.gene09865:intron | 30.0% | |
| GTAATTTGGATGGATATTCA+AGG | - | chr7.3:12836150-12836169 | MS.gene09865:intron | 30.0% | |
| GTCTTGTGAAAATGCTTTAT+TGG | + | chr7.3:12833790-12833809 | None:intergenic | 30.0% | |
| TAAATGCAAAGATCAAGCTT+TGG | + | chr7.3:12835369-12835388 | None:intergenic | 30.0% | |
| TAATATAGTTCCAAAACTCC+AGG | - | chr7.3:12833440-12833459 | MS.gene09865:CDS | 30.0% | |
| TATTCTCAATGTATAGTTGG+TGG | + | chr7.3:12834623-12834642 | None:intergenic | 30.0% | |
| TCCAAAGATTTGTGGATTTA+AGG | - | chr7.3:12835578-12835597 | MS.gene09865:intron | 30.0% | |
| TGATAGGGATAATGCATATT+GGG | - | chr7.3:12835435-12835454 | MS.gene09865:intron | 30.0% | |
| TGCAAATATACACAAACACT+TGG | + | chr7.3:12833839-12833858 | None:intergenic | 30.0% | |
| TTGAAATAGACAAGTCATCT+CGG | + | chr7.3:12835246-12835265 | None:intergenic | 30.0% | |
| ! | ACTTAAATCTGGAATTTGGA+TGG | - | chr7.3:12833735-12833754 | MS.gene09865:CDS | 30.0% |
| ! | CCTTGGTTTGATATATGATA+GGG | - | chr7.3:12835420-12835439 | MS.gene09865:intron | 30.0% |
| ! | CTTCATTTTCCAAAGATTTG+TGG | - | chr7.3:12835570-12835589 | MS.gene09865:intron | 30.0% |
| ! | CTTCCAAGCTTTTCAATATT+GGG | + | chr7.3:12836218-12836237 | None:intergenic | 30.0% |
| ! | GACTATCAGTTATTTCGATT+GGG | + | chr7.3:12833218-12833237 | None:intergenic | 30.0% |
| ! | TCATTTTCTCTTCTTTTCTC+AGG | - | chr7.3:12835623-12835642 | MS.gene09865:intron | 30.0% |
| ! | TCCTTGGTTTGATATATGAT+AGG | - | chr7.3:12835419-12835438 | MS.gene09865:intron | 30.0% |
| ! | TCTTCCAAGCTTTTCAATAT+TGG | + | chr7.3:12836219-12836238 | None:intergenic | 30.0% |
| ! | TGACTATCAGTTATTTCGAT+TGG | + | chr7.3:12833219-12833238 | None:intergenic | 30.0% |
| ! | TTCCAAGCTTTTCAATATTG+GGG | + | chr7.3:12836217-12836236 | None:intergenic | 30.0% |
| ! | TTGTTTCATTTCTTGAGTTG+TGG | + | chr7.3:12835146-12835165 | None:intergenic | 30.0% |
| ! | TTTTTGTTGAAGTGGATACA+TGG | - | chr7.3:12832643-12832662 | MS.gene09865:CDS | 30.0% |
| !! | TTTGAAGTTTGTTTGACTTG+CGG | + | chr7.3:12836565-12836584 | None:intergenic | 30.0% |
| AAAGAAGAGAAAATGACCCA+TGG | + | chr7.3:12835619-12835638 | None:intergenic | 35.0% | |
| AAATCTTGCAGTTTCTCTTC+TGG | + | chr7.3:12834962-12834981 | None:intergenic | 35.0% | |
| AACTCTTACCAACAAAGATG+AGG | - | chr7.3:12836419-12836438 | MS.gene09865:CDS | 35.0% | |
| AATCTTGCAGTTTCTCTTCT+GGG | + | chr7.3:12834961-12834980 | None:intergenic | 35.0% | |
| AATGGTACGAACCAGAAATT+TGG | + | chr7.3:12836018-12836037 | None:intergenic | 35.0% | |
| AGAAGAGAAACTGCAAGATT+TGG | - | chr7.3:12834961-12834980 | MS.gene09865:intron | 35.0% | |
| ATCTCAATGCAGACACATTT+AGG | - | chr7.3:12836322-12836341 | MS.gene09865:CDS | 35.0% | |
| ATTTACAGCAGAAGCTGAAA+TGG | - | chr7.3:12835990-12836009 | MS.gene09865:intron | 35.0% | |
| CAATCTGCTTAATGCAATCT+TGG | + | chr7.3:12835870-12835889 | None:intergenic | 35.0% | |
| CCCTATCATATATCAAACCA+AGG | + | chr7.3:12835423-12835442 | None:intergenic | 35.0% | |
| GATATTGAACAGAGATGAAG+AGG | - | chr7.3:12836344-12836363 | MS.gene09865:CDS | 35.0% | |
| TACTATAGTTCTTCCTACCA+AGG | + | chr7.3:12835708-12835727 | None:intergenic | 35.0% | |
| TATGTCAGCACAGTTATACA+TGG | - | chr7.3:12832422-12832441 | MS.gene09865:CDS | 35.0% | |
| TATTTCTCTCATCAAGCTAC+TGG | + | chr7.3:12836496-12836515 | None:intergenic | 35.0% | |
| TCACAATTGGCACAAAAAGA+TGG | - | chr7.3:12836126-12836145 | MS.gene09865:intron | 35.0% | |
| TCAGGCAAAGTAGAATGTAT+GGG | - | chr7.3:12835641-12835660 | MS.gene09865:intron | 35.0% | |
| TGCATGAAGAGAAAGACATT+TGG | - | chr7.3:12833855-12833874 | MS.gene09865:CDS | 35.0% | |
| TTAGTTTATTCGCAACTGCT+AGG | + | chr7.3:12834847-12834866 | None:intergenic | 35.0% | |
| TTGACGAAAAGGATTGCATA+TGG | - | chr7.3:12832381-12832400 | MS.gene09865:CDS | 35.0% | |
| TTTAAGTCCTCTCTGTCATT+AGG | - | chr7.3:12835385-12835404 | MS.gene09865:intron | 35.0% | |
| ! | AGATTTTTGTAGGCTATGGA+TGG | + | chr7.3:12835187-12835206 | None:intergenic | 35.0% |
| ! | AGGTTGTTGGCATGTTTTAT+TGG | - | chr7.3:12832224-12832243 | MS.gene09865:CDS | 35.0% |
| ! | ATTGCAATTAGTTTCGTGAC+TGG | - | chr7.3:12835469-12835488 | MS.gene09865:intron | 35.0% |
| ! | GATTTTTGTAGGCTATGGAT+GGG | + | chr7.3:12835186-12835205 | None:intergenic | 35.0% |
| ! | GTTCTTAGCTCTTATACCAT+GGG | - | chr7.3:12835600-12835619 | MS.gene09865:intron | 35.0% |
| ! | TCAATTTGGAGTTGCTAGAA+TGG | - | chr7.3:12835735-12835754 | MS.gene09865:intron | 35.0% |
| ! | TCAGTTATTTCGATTGGGTA+TGG | + | chr7.3:12833213-12833232 | None:intergenic | 35.0% |
| ! | TGATGTTGGGAGATTTTTGT+AGG | + | chr7.3:12835197-12835216 | None:intergenic | 35.0% |
| !! | CTTTTTCATTACAGCTGCTT+CGG | - | chr7.3:12836462-12836481 | MS.gene09865:CDS | 35.0% |
| !! | GAACAAAACATTTAGCTTGC+TGG | + | chr7.3:12835111-12835130 | None:intergenic | 35.0% |
| !! | TGTTTTATTGGCAACCATTC+AGG | - | chr7.3:12832236-12832255 | MS.gene09865:CDS | 35.0% |
| !! | TTGAAGTTTGTTTGACTTGC+GGG | + | chr7.3:12836564-12836583 | None:intergenic | 35.0% |
| !!! | TAGCTTGCTGGTCTAATTTT+TGG | + | chr7.3:12835099-12835118 | None:intergenic | 35.0% |
| !!! | TTGCACATTGTCTTGTTTTC+AGG | - | chr7.3:12834587-12834606 | MS.gene09865:intron | 35.0% |
| AAAAACAGGATGGCATGCAT+TGG | - | chr7.3:12834894-12834913 | MS.gene09865:intron | 40.0% | |
| AAAACAGGATGGCATGCATT+GGG | - | chr7.3:12834895-12834914 | MS.gene09865:intron | 40.0% | |
| AAAACTCCAGGAATCGATTG+GGG | - | chr7.3:12833452-12833471 | MS.gene09865:CDS | 40.0% | |
| AACATGCCAACAACCTCTAA+CGG | + | chr7.3:12832220-12832239 | None:intergenic | 40.0% | |
| AAGCATCTCCTCATCTTTGT+TGG | + | chr7.3:12836430-12836449 | None:intergenic | 40.0% | |
| AATGGAGCATGTCTCACAAT+TGG | - | chr7.3:12836113-12836132 | MS.gene09865:intron | 40.0% | |
| AATGTAAGCAAACCGAGGAT+AGG | + | chr7.3:12832543-12832562 | None:intergenic | 40.0% | |
| ACAAACACTTGGAGACAGAT+TGG | + | chr7.3:12833828-12833847 | None:intergenic | 40.0% | |
| ACAGCTATGGGATCAATCTA+CGG | - | chr7.3:12835535-12835554 | MS.gene09865:intron | 40.0% | |
| ACGACGTATCTCTTTCGTTA+GGG | + | chr7.3:12835903-12835922 | None:intergenic | 40.0% | |
| ACGTCATATCATTGAAGTGG+GGG | + | chr7.3:12834309-12834328 | None:intergenic | 40.0% | |
| AGTAGAATGTATGGGGAATC+TGG | - | chr7.3:12835649-12835668 | MS.gene09865:intron | 40.0% | |
| ATACAGTTGCCGAAGTTATC+GGG | + | chr7.3:12832300-12832319 | None:intergenic | 40.0% | |
| ATATGCTGGGATCTCTATCA+AGG | - | chr7.3:12836058-12836077 | MS.gene09865:intron | 40.0% | |
| ATGGACATTGCTCTATCAAG+TGG | - | chr7.3:12835001-12835020 | MS.gene09865:intron | 40.0% | |
| ATGTAAGCAAACCGAGGATA+GGG | + | chr7.3:12832542-12832561 | None:intergenic | 40.0% | |
| CAAAACTCCAGGAATCGATT+GGG | - | chr7.3:12833451-12833470 | MS.gene09865:CDS | 40.0% | |
| CAACATCTAGAGGAAATTGC+TGG | - | chr7.3:12836393-12836412 | MS.gene09865:CDS | 40.0% | |
| CAATTTCCTCTAGATGTTGG+AGG | + | chr7.3:12836392-12836411 | None:intergenic | 40.0% | |
| CACGTCATATCATTGAAGTG+GGG | + | chr7.3:12834310-12834329 | None:intergenic | 40.0% | |
| CAGCAATTTCCTCTAGATGT+TGG | + | chr7.3:12836395-12836414 | None:intergenic | 40.0% | |
| CAGGCAAAGTAGAATGTATG+GGG | - | chr7.3:12835642-12835661 | MS.gene09865:intron | 40.0% | |
| CATACAGTTGCCGAAGTTAT+CGG | + | chr7.3:12832301-12832320 | None:intergenic | 40.0% | |
| CCACGTCATATCATTGAAGT+GGG | + | chr7.3:12834311-12834330 | None:intergenic | 40.0% | |
| CCAGTGTAGTTGTGATACTA+TGG | + | chr7.3:12834758-12834777 | None:intergenic | 40.0% | |
| CCATAGTATCACAACTACAC+TGG | - | chr7.3:12834755-12834774 | MS.gene09865:intron | 40.0% | |
| CTAGCAACTCCAAATTGAGT+CGG | + | chr7.3:12835733-12835752 | None:intergenic | 40.0% | |
| CTCAGGCAAAGTAGAATGTA+TGG | - | chr7.3:12835640-12835659 | MS.gene09865:intron | 40.0% | |
| CTGAAATGGAGCCAAATTTC+TGG | - | chr7.3:12836004-12836023 | MS.gene09865:intron | 40.0% | |
| CTGTAGCAGGTAGTATGAAA+TGG | + | chr7.3:12836036-12836055 | None:intergenic | 40.0% | |
| GAACAAGCCACATGAATTGA+AGG | + | chr7.3:12832470-12832489 | None:intergenic | 40.0% | |
| GCTCATAGTTACCAACATGT+AGG | + | chr7.3:12833191-12833210 | None:intergenic | 40.0% | |
| GGAAATACCAATAAGAGGGA+TGG | - | chr7.3:12834982-12835001 | MS.gene09865:intron | 40.0% | |
| GGATGGATATTCAAGGTCAA+GGG | - | chr7.3:12836157-12836176 | MS.gene09865:intron | 40.0% | |
| GGCAATTTCGACAGTTATAG+GGG | - | chr7.3:12835672-12835691 | MS.gene09865:intron | 40.0% | |
| GGGCAATTTCGACAGTTATA+GGG | - | chr7.3:12835671-12835690 | MS.gene09865:intron | 40.0% | |
| GTAGAATGTATGGGGAATCT+GGG | - | chr7.3:12835650-12835669 | MS.gene09865:intron | 40.0% | |
| GTCACTATGCATTTGTCACT+AGG | - | chr7.3:12833545-12833564 | MS.gene09865:CDS | 40.0% | |
| GTTACGCAGACATATGAGTT+TGG | + | chr7.3:12833768-12833787 | None:intergenic | 40.0% | |
| GTTATACATGGTGCACAAGA+AGG | - | chr7.3:12832434-12832453 | MS.gene09865:CDS | 40.0% | |
| GTTATACGACCCGATAACTT+CGG | - | chr7.3:12832288-12832307 | MS.gene09865:CDS | 40.0% | |
| GTTATTGATGAGGAGCTAAG+AGG | - | chr7.3:12835043-12835062 | MS.gene09865:intron | 40.0% | |
| TAGAATGTATGGGGAATCTG+GGG | - | chr7.3:12835651-12835670 | MS.gene09865:intron | 40.0% | |
| TAGCAACTCCAAATTGAGTC+GGG | + | chr7.3:12835732-12835751 | None:intergenic | 40.0% | |
| TAGGGATAATGCATATTGGG+CGG | - | chr7.3:12835438-12835457 | MS.gene09865:intron | 40.0% | |
| TATAGTACCCCGACTCAATT+TGG | - | chr7.3:12835721-12835740 | MS.gene09865:intron | 40.0% | |
| TCCACGTCATATCATTGAAG+TGG | + | chr7.3:12834312-12834331 | None:intergenic | 40.0% | |
| TCCTCATCAATAACACCAAC+AGG | + | chr7.3:12835037-12835056 | None:intergenic | 40.0% | |
| TGAGTTGTGGTTGCATCAAA+AGG | + | chr7.3:12835133-12835152 | None:intergenic | 40.0% | |
| TGCCCCAATATTGAAAAGCT+TGG | - | chr7.3:12836212-12836231 | MS.gene09865:intron | 40.0% | |
| TGGATGGATATTCAAGGTCA+AGG | - | chr7.3:12836156-12836175 | MS.gene09865:intron | 40.0% | |
| TGTGATACTATGGAGAAGCT+TGG | + | chr7.3:12834748-12834767 | None:intergenic | 40.0% | |
| TTGTTGAAGTGGATACATGG+AGG | - | chr7.3:12832646-12832665 | MS.gene09865:CDS | 40.0% | |
| ! | ATGCAAAGATCAAGCTTTGG+TGG | + | chr7.3:12835366-12835385 | None:intergenic | 40.0% |
| ! | GCTTTTTGTGGCATACTCAA+TGG | - | chr7.3:12836095-12836114 | MS.gene09865:intron | 40.0% |
| ! | GGTTCTTAGCTCTTATACCA+TGG | - | chr7.3:12835599-12835618 | MS.gene09865:intron | 40.0% |
| ! | TGGGAGATTTTTGTAGGCTA+TGG | + | chr7.3:12835191-12835210 | None:intergenic | 40.0% |
| !! | GTCAACAAGTGTGTCGATTT+GGG | + | chr7.3:12832366-12832385 | None:intergenic | 40.0% |
| !! | TCCTGTTGGTGTTATTGATG+AGG | - | chr7.3:12835033-12835052 | MS.gene09865:intron | 40.0% |
| !! | TGAAGTTTGTTTGACTTGCG+GGG | + | chr7.3:12836563-12836582 | None:intergenic | 40.0% |
| !!! | CATTGTCTTGTTTTCAGGCA+AGG | - | chr7.3:12834592-12834611 | MS.gene09865:intron | 40.0% |
| !!! | GGTAGATCTCTTGCTTTTTG+TGG | - | chr7.3:12836083-12836102 | MS.gene09865:intron | 40.0% |
| !!! | TCTGAGCTTTTTTCTGCACA+TGG | + | chr7.3:12835279-12835298 | None:intergenic | 40.0% |
| AAACGACTCTGCCTACATGT+TGG | - | chr7.3:12833177-12833196 | MS.gene09865:CDS | 45.0% | |
| ACCTCAATGTAAGCAAACCG+AGG | + | chr7.3:12832548-12832567 | None:intergenic | 45.0% | |
| ACCTGCTACAGCAATATGCT+GGG | - | chr7.3:12836045-12836064 | MS.gene09865:intron | 45.0% | |
| AGAATGGCAGAGGCTACAAT+AGG | - | chr7.3:12835751-12835770 | MS.gene09865:intron | 45.0% | |
| AGCAACTCCAAATTGAGTCG+GGG | + | chr7.3:12835731-12835750 | None:intergenic | 45.0% | |
| AGGGATAATGCATATTGGGC+GGG | - | chr7.3:12835439-12835458 | MS.gene09865:intron | 45.0% | |
| CAGCTATGGGATCAATCTAC+GGG | - | chr7.3:12835536-12835555 | MS.gene09865:intron | 45.0% | |
| CCAAAACTCCAGGAATCGAT+TGG | - | chr7.3:12833450-12833469 | MS.gene09865:CDS | 45.0% | |
| CCCACTTCAATGATATGACG+TGG | - | chr7.3:12834308-12834327 | MS.gene09865:intron | 45.0% | |
| CGACGTATCTCTTTCGTTAG+GGG | + | chr7.3:12835902-12835921 | None:intergenic | 45.0% | |
| CGATAACTTCGGCAACTGTA+TGG | - | chr7.3:12832299-12832318 | MS.gene09865:CDS | 45.0% | |
| CGTCATATCATTGAAGTGGG+GGG | + | chr7.3:12834308-12834327 | None:intergenic | 45.0% | |
| CTCTTTCCTCCAACATCTAG+AGG | - | chr7.3:12836383-12836402 | MS.gene09865:CDS | 45.0% | |
| CTTCCTACCAAGGATCAACA+AGG | + | chr7.3:12835698-12835717 | None:intergenic | 45.0% | |
| GACGACGTATCTCTTTCGTT+AGG | + | chr7.3:12835904-12835923 | None:intergenic | 45.0% | |
| GCAATGTCCATCCCTCTTAT+TGG | + | chr7.3:12834992-12835011 | None:intergenic | 45.0% | |
| GCAGACATATGAGTTTGGAC+TGG | + | chr7.3:12833763-12833782 | None:intergenic | 45.0% | |
| GCGTTTGCAACTGAGAATGT+TGG | + | chr7.3:12835502-12835521 | None:intergenic | 45.0% | |
| GGGGCAATTTCGACAGTTAT+AGG | - | chr7.3:12835670-12835689 | MS.gene09865:intron | 45.0% | |
| TACCTGCTACAGCAATATGC+TGG | - | chr7.3:12836044-12836063 | MS.gene09865:intron | 45.0% | |
| TCAGACAACTCAACTGCTGT+TGG | - | chr7.3:12834684-12834703 | MS.gene09865:intron | 45.0% | |
| TCTTTCGTTAGGGGTAGTCA+TGG | + | chr7.3:12835893-12835912 | None:intergenic | 45.0% | |
| TGGAGCTATAGCTTCTGTTC+TGG | - | chr7.3:12832499-12832518 | MS.gene09865:CDS | 45.0% | |
| TGGGTCAATGCAACAAGAGT+TGG | + | chr7.3:12834942-12834961 | None:intergenic | 45.0% | |
| ! | AAAGATCAAGCTTTGGTGGC+TGG | + | chr7.3:12835362-12835381 | None:intergenic | 45.0% |
| ! | AACAGCAGTTGAGTTGTCTG+AGG | + | chr7.3:12834685-12834704 | None:intergenic | 45.0% |
| ! | AAGATCAAGCTTTGGTGGCT+GGG | + | chr7.3:12835361-12835380 | None:intergenic | 45.0% |
| ! | AGTGGCATGTCTTTTCCTGT+TGG | - | chr7.3:12835019-12835038 | MS.gene09865:intron | 45.0% |
| ! | CGACACACTTGTTGACGAAA+AGG | - | chr7.3:12832370-12832389 | MS.gene09865:CDS | 45.0% |
| ! | GCAATCTTGGAGTGTTCTGA+AGG | + | chr7.3:12835857-12835876 | None:intergenic | 45.0% |
| ! | TCCTCGGTTTGCTTACATTG+AGG | - | chr7.3:12832544-12832563 | MS.gene09865:CDS | 45.0% |
| !! | CCAATCGATTCCTGGAGTTT+TGG | + | chr7.3:12833453-12833472 | None:intergenic | 45.0% |
| !! | CGTCAACAAGTGTGTCGATT+TGG | + | chr7.3:12832367-12832386 | None:intergenic | 45.0% |
| !! | GAGCTTGTTGGAGCTACATT+GGG | + | chr7.3:12835314-12835333 | None:intergenic | 45.0% |
| !! | TGAGCTTGTTGGAGCTACAT+TGG | + | chr7.3:12835315-12835334 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTTATAAAAAAAC+AGG | - | chr7.3:12834880-12834899 | MS.gene09865:intron | 5.0% |
| ACATGGTGCACAAGAAGGAG+TGG | - | chr7.3:12832439-12832458 | MS.gene09865:CDS | 50.0% | |
| ACGAGGAACAGGAACAGCTA+TGG | - | chr7.3:12835522-12835541 | MS.gene09865:intron | 50.0% | |
| AGCTATAGCTCCAAGTGCAG+TGG | + | chr7.3:12832492-12832511 | None:intergenic | 50.0% | |
| CGAGGAACAGGAACAGCTAT+GGG | - | chr7.3:12835523-12835542 | MS.gene09865:intron | 50.0% | |
| CTAGAGTTGCAGCTCTTGAG+GGG | + | chr7.3:12835813-12835832 | None:intergenic | 50.0% | |
| GCTAGAGTTGCAGCTCTTGA+GGG | + | chr7.3:12835814-12835833 | None:intergenic | 50.0% | |
| GCTGGGATCTCTATCAAGGA+CGG | - | chr7.3:12836062-12836081 | MS.gene09865:intron | 50.0% | |
| GGCAAAGCCTAATGACAGAG+AGG | + | chr7.3:12835395-12835414 | None:intergenic | 50.0% | |
| GGCTACGCCTTCAATTCATG+TGG | - | chr7.3:12832460-12832479 | MS.gene09865:CDS | 50.0% | |
| TCCCAGCATATTGCTGTAGC+AGG | + | chr7.3:12836049-12836068 | None:intergenic | 50.0% | |
| TCTTGTGACTCGAGATCGTG+AGG | + | chr7.3:12836300-12836319 | None:intergenic | 50.0% | |
| TGCTAGAGTTGCAGCTCTTG+AGG | + | chr7.3:12835815-12835834 | None:intergenic | 50.0% | |
| TGGAGTTGCTAGAATGGCAG+AGG | - | chr7.3:12835741-12835760 | MS.gene09865:intron | 50.0% | |
| TTAGGCTTTGCCGTGTTCCT+TGG | - | chr7.3:12835403-12835422 | MS.gene09865:intron | 50.0% | |
| TTCTCAGTTGCAAACGCACG+AGG | - | chr7.3:12835505-12835524 | MS.gene09865:intron | 50.0% | |
| ! | TGAGTTGTCTGAGGCTGAGA+TGG | + | chr7.3:12834676-12834695 | None:intergenic | 50.0% |
| ! | TTGGATCCCCAATCGATTCC+TGG | + | chr7.3:12833461-12833480 | None:intergenic | 50.0% |
| !! | ATAGGGGCCTTGTTGATCCT+TGG | - | chr7.3:12835688-12835707 | MS.gene09865:intron | 50.0% |
| !! | TCCTGTTGTGGAGAGGTACT+TGG | + | chr7.3:12834724-12834743 | None:intergenic | 50.0% |
| AAGCAAACCGAGGATAGGGC+AGG | + | chr7.3:12832538-12832557 | None:intergenic | 55.0% | |
| AGCAAACCGAGGATAGGGCA+GGG | + | chr7.3:12832537-12832556 | None:intergenic | 55.0% | |
| AGTGGCTACCGGTGCATTTG+TGG | - | chr7.3:12832332-12832351 | MS.gene09865:CDS | 55.0% | |
| CAAACGCTCGCTGAGCTTGT+TGG | + | chr7.3:12835326-12835345 | None:intergenic | 55.0% | |
| CATTGAAGTGGGGGGTAGTG+AGG | + | chr7.3:12834300-12834319 | None:intergenic | 55.0% | |
| GAGAAGCTTGGCTCCTGTTG+TGG | + | chr7.3:12834736-12834755 | None:intergenic | 55.0% | |
| GCCAAGTACCTCTCCACAAC+AGG | - | chr7.3:12834720-12834739 | MS.gene09865:intron | 55.0% | |
| GTGACGCCGTTAGAGGTTGT+TGG | - | chr7.3:12832211-12832230 | MS.gene09865:CDS | 55.0% | |
| GTTGCAAACGCACGAGGAAC+AGG | - | chr7.3:12835511-12835530 | MS.gene09865:intron | 55.0% | |
| !! | ACACTTGGTGACGCCGTTAG+AGG | - | chr7.3:12832204-12832223 | MS.gene09865:CDS | 55.0% |
| !! | GGGCCTTGTTGATCCTTGGT+AGG | - | chr7.3:12835692-12835711 | MS.gene09865:intron | 55.0% |
| !! | GTGGCTTGTTCCACTGCACT+TGG | - | chr7.3:12832479-12832498 | MS.gene09865:CDS | 55.0% |
| ATAGGGCAGGGGCAGCAACA+TGG | + | chr7.3:12832525-12832544 | None:intergenic | 60.0% | |
| CAGCGCCACCACAAATGCAC+CGG | + | chr7.3:12832343-12832362 | None:intergenic | 60.0% | |
| GCAAACCGAGGATAGGGCAG+GGG | + | chr7.3:12832536-12832555 | None:intergenic | 60.0% | |
| GCTTGGCTCCTGTTGTGGAG+AGG | + | chr7.3:12834731-12834750 | None:intergenic | 60.0% | |
| GGCTACCGGTGCATTTGTGG+TGG | - | chr7.3:12832335-12832354 | MS.gene09865:CDS | 60.0% | |
| CGGCAACTGTATGGCTGCGC+TGG | - | chr7.3:12832308-12832327 | MS.gene09865:CDS | 65.0% | |
| TGCTGCCCCTGCCCTATCCT+CGG | - | chr7.3:12832528-12832547 | MS.gene09865:CDS | 65.0% | |
| ! | CTGTATGGCTGCGCTGGCAG+TGG | - | chr7.3:12832314-12832333 | MS.gene09865:CDS | 65.0% |
| ! | GCTGCGCTGGCAGTGGCTAC+CGG | - | chr7.3:12832321-12832340 | MS.gene09865:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 12832199 | 12836620 | 12832199 | ID=MS.gene09865 |
| chr7.3 | mRNA | 12832199 | 12836620 | 12832199 | ID=MS.gene09865.t1;Parent=MS.gene09865 |
| chr7.3 | exon | 12836562 | 12836620 | 12836562 | ID=MS.gene09865.t1.exon1;Parent=MS.gene09865.t1 |
| chr7.3 | CDS | 12836562 | 12836620 | 12836562 | ID=cds.MS.gene09865.t1;Parent=MS.gene09865.t1 |
| chr7.3 | exon | 12836254 | 12836485 | 12836254 | ID=MS.gene09865.t1.exon2;Parent=MS.gene09865.t1 |
| chr7.3 | CDS | 12836254 | 12836485 | 12836254 | ID=cds.MS.gene09865.t1;Parent=MS.gene09865.t1 |
| chr7.3 | exon | 12834043 | 12834210 | 12834043 | ID=MS.gene09865.t1.exon3;Parent=MS.gene09865.t1 |
| chr7.3 | CDS | 12834043 | 12834210 | 12834043 | ID=cds.MS.gene09865.t1;Parent=MS.gene09865.t1 |
| chr7.3 | exon | 12832199 | 12833917 | 12832199 | ID=MS.gene09865.t1.exon4;Parent=MS.gene09865.t1 |
| chr7.3 | CDS | 12832199 | 12833917 | 12832199 | ID=cds.MS.gene09865.t1;Parent=MS.gene09865.t1 |
| Gene Sequence |
| Protein sequence |
