Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22820.t1 | NP_001235332.1 | 100 | 148 | 0 | 0 | 1 | 148 | 1 | 148 | 6.70E-82 | 313.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22820.t1 | P35135 | 98.0 | 148 | 3 | 0 | 1 | 148 | 1 | 148 | 8.8e-83 | 307.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22820.t1 | A0A5B6ZAJ0 | 100.0 | 148 | 0 | 0 | 1 | 148 | 1 | 148 | 4.8e-82 | 313.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene22820 | -0.822483 | 2.31E-53 | -1.69E-46 |
| MS.gene049151 | MS.gene22820 | -0.825131 | 5.54E-54 | -1.69E-46 |
| MS.gene049153 | MS.gene22820 | -0.823408 | 1.41E-53 | -1.69E-46 |
| MS.gene049159 | MS.gene22820 | -0.830243 | 3.28E-55 | -1.69E-46 |
| MS.gene049230 | MS.gene22820 | -0.841455 | 4.70E-58 | -1.69E-46 |
| MS.gene049297 | MS.gene22820 | -0.837145 | 6.18E-57 | -1.69E-46 |
| MS.gene049378 | MS.gene22820 | -0.88296 | 6.72E-71 | -1.69E-46 |
| MS.gene049435 | MS.gene22820 | -0.817739 | 2.82E-52 | -1.69E-46 |
| MS.gene049443 | MS.gene22820 | -0.803833 | 2.89E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene22820 | -0.832873 | 7.37E-56 | -1.69E-46 |
| MS.gene04991 | MS.gene22820 | 0.818961 | 1.49E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene22820 | -0.898111 | 7.31E-77 | -1.69E-46 |
| MS.gene050227 | MS.gene22820 | -0.904228 | 1.53E-79 | -1.69E-46 |
| MS.gene050228 | MS.gene22820 | -0.902733 | 7.17E-79 | -1.69E-46 |
| MS.gene050303 | MS.gene22820 | -0.804213 | 2.41E-49 | -1.69E-46 |
| MS.gene050330 | MS.gene22820 | 0.823949 | 1.05E-53 | -1.69E-46 |
| MS.gene050442 | MS.gene22820 | -0.858008 | 1.11E-62 | -1.69E-46 |
| MS.gene050605 | MS.gene22820 | -0.820683 | 6.03E-53 | -1.69E-46 |
| MS.gene050623 | MS.gene22820 | 0.98857 | 1.54E-174 | -1.69E-46 |
| MS.gene050642 | MS.gene22820 | -0.895569 | 8.46E-76 | -1.69E-46 |
| MS.gene050719 | MS.gene22820 | -0.8284 | 9.18E-55 | -1.69E-46 |
| MS.gene050721 | MS.gene22820 | -0.82837 | 9.34E-55 | -1.69E-46 |
| MS.gene050724 | MS.gene22820 | -0.822239 | 2.63E-53 | -1.69E-46 |
| MS.gene050750 | MS.gene22820 | -0.811092 | 8.32E-51 | -1.69E-46 |
| MS.gene050759 | MS.gene22820 | -0.806882 | 6.63E-50 | -1.69E-46 |
| MS.gene050762 | MS.gene22820 | -0.865684 | 4.94E-65 | -1.69E-46 |
| MS.gene050763 | MS.gene22820 | -0.867572 | 1.24E-65 | -1.69E-46 |
| MS.gene050815 | MS.gene22820 | -0.802814 | 4.69E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene22820 | -0.812518 | 4.07E-51 | -1.69E-46 |
| MS.gene051210 | MS.gene22820 | -0.807056 | 6.09E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene22820 | -0.841337 | 5.05E-58 | -1.69E-46 |
| MS.gene051662 | MS.gene22820 | -0.81371 | 2.23E-51 | -1.69E-46 |
| MS.gene051663 | MS.gene22820 | -0.817903 | 2.59E-52 | -1.69E-46 |
| MS.gene051860 | MS.gene22820 | -0.863106 | 3.15E-64 | -1.69E-46 |
| MS.gene051983 | MS.gene22820 | -0.903216 | 4.36E-79 | -1.69E-46 |
| MS.gene052012 | MS.gene22820 | -0.842052 | 3.27E-58 | -1.69E-46 |
| MS.gene052048 | MS.gene22820 | 0.833883 | 4.13E-56 | -1.69E-46 |
| MS.gene052077 | MS.gene22820 | -0.850037 | 2.20E-60 | -1.69E-46 |
| MS.gene052176 | MS.gene22820 | -0.834153 | 3.53E-56 | -1.69E-46 |
| MS.gene052178 | MS.gene22820 | -0.800437 | 1.44E-48 | -1.69E-46 |
| MS.gene052309 | MS.gene22820 | 0.852377 | 4.81E-61 | -1.69E-46 |
| MS.gene052333 | MS.gene22820 | -0.800141 | 1.66E-48 | -1.69E-46 |
| MS.gene052389 | MS.gene22820 | -0.810597 | 1.07E-50 | -1.69E-46 |
| MS.gene052426 | MS.gene22820 | -0.825905 | 3.63E-54 | -1.69E-46 |
| MS.gene052600 | MS.gene22820 | -0.814298 | 1.65E-51 | -1.69E-46 |
| MS.gene053008 | MS.gene22820 | -0.84172 | 4.00E-58 | -1.69E-46 |
| MS.gene05316 | MS.gene22820 | -0.817288 | 3.56E-52 | -1.69E-46 |
| MS.gene053216 | MS.gene22820 | -0.814287 | 1.66E-51 | -1.69E-46 |
| MS.gene053494 | MS.gene22820 | -0.819961 | 8.82E-53 | -1.69E-46 |
| MS.gene053811 | MS.gene22820 | -0.80117 | 1.02E-48 | -1.69E-46 |
| MS.gene053836 | MS.gene22820 | -0.859704 | 3.44E-63 | -1.69E-46 |
| MS.gene05414 | MS.gene22820 | -0.801857 | 7.39E-49 | -1.69E-46 |
| MS.gene054184 | MS.gene22820 | -0.802441 | 5.60E-49 | -1.69E-46 |
| MS.gene054185 | MS.gene22820 | -0.802676 | 5.01E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene22820 | 0.817947 | 2.53E-52 | -1.69E-46 |
| MS.gene054379 | MS.gene22820 | -0.865049 | 7.83E-65 | -1.69E-46 |
| MS.gene054405 | MS.gene22820 | -0.803969 | 2.70E-49 | -1.69E-46 |
| MS.gene054468 | MS.gene22820 | -0.807048 | 6.11E-50 | -1.69E-46 |
| MS.gene054542 | MS.gene22820 | -0.800379 | 1.48E-48 | -1.69E-46 |
| MS.gene054657 | MS.gene22820 | -0.814376 | 1.59E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene22820 | -0.812713 | 3.69E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene22820 | -0.854617 | 1.09E-61 | -1.69E-46 |
| MS.gene054942 | MS.gene22820 | -0.853063 | 3.06E-61 | -1.69E-46 |
| MS.gene05510 | MS.gene22820 | -0.845019 | 5.27E-59 | -1.69E-46 |
| MS.gene055222 | MS.gene22820 | -0.843647 | 1.23E-58 | -1.69E-46 |
| MS.gene055422 | MS.gene22820 | -0.807074 | 6.04E-50 | -1.69E-46 |
| MS.gene055623 | MS.gene22820 | -0.804386 | 2.21E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene22820 | -0.863159 | 3.04E-64 | -1.69E-46 |
| MS.gene056069 | MS.gene22820 | 0.815826 | 7.58E-52 | -1.69E-46 |
| MS.gene056447 | MS.gene22820 | -0.830699 | 2.54E-55 | -1.69E-46 |
| MS.gene056506 | MS.gene22820 | -0.842468 | 2.54E-58 | -1.69E-46 |
| MS.gene056552 | MS.gene22820 | -0.858645 | 7.14E-63 | -1.69E-46 |
| MS.gene056875 | MS.gene22820 | -0.810844 | 9.42E-51 | -1.69E-46 |
| MS.gene056979 | MS.gene22820 | -0.90027 | 8.67E-78 | -1.69E-46 |
| MS.gene057200 | MS.gene22820 | -0.804304 | 2.30E-49 | -1.69E-46 |
| MS.gene057469 | MS.gene22820 | -0.810189 | 1.30E-50 | -1.69E-46 |
| MS.gene05761 | MS.gene22820 | -0.844875 | 5.76E-59 | -1.69E-46 |
| MS.gene057869 | MS.gene22820 | -0.800652 | 1.30E-48 | -1.69E-46 |
| MS.gene058142 | MS.gene22820 | -0.818582 | 1.82E-52 | -1.69E-46 |
| MS.gene058146 | MS.gene22820 | -0.858071 | 1.06E-62 | -1.69E-46 |
| MS.gene058223 | MS.gene22820 | 0.801952 | 7.06E-49 | -1.69E-46 |
| MS.gene058399 | MS.gene22820 | -0.867886 | 9.83E-66 | -1.69E-46 |
| MS.gene058435 | MS.gene22820 | -0.847031 | 1.50E-59 | -1.69E-46 |
| MS.gene058548 | MS.gene22820 | -0.820604 | 6.28E-53 | -1.69E-46 |
| MS.gene058549 | MS.gene22820 | -0.826859 | 2.15E-54 | -1.69E-46 |
| MS.gene058595 | MS.gene22820 | -0.813404 | 2.60E-51 | -1.69E-46 |
| MS.gene058661 | MS.gene22820 | 0.81351 | 2.47E-51 | -1.69E-46 |
| MS.gene058710 | MS.gene22820 | -0.811745 | 6.00E-51 | -1.69E-46 |
| MS.gene059161 | MS.gene22820 | -0.826931 | 2.07E-54 | -1.69E-46 |
| MS.gene059249 | MS.gene22820 | -0.825232 | 5.24E-54 | -1.69E-46 |
| MS.gene059285 | MS.gene22820 | -0.801105 | 1.05E-48 | -1.69E-46 |
| MS.gene059569 | MS.gene22820 | -0.808928 | 2.43E-50 | -1.69E-46 |
| MS.gene059609 | MS.gene22820 | -0.836447 | 9.31E-57 | -1.69E-46 |
| MS.gene059725 | MS.gene22820 | -0.808327 | 3.27E-50 | -1.69E-46 |
| MS.gene05979 | MS.gene22820 | -0.836905 | 7.11E-57 | -1.69E-46 |
| MS.gene05984 | MS.gene22820 | -0.860486 | 2.00E-63 | -1.69E-46 |
| MS.gene060084 | MS.gene22820 | -0.843611 | 1.26E-58 | -1.69E-46 |
| MS.gene060137 | MS.gene22820 | 0.851719 | 7.39E-61 | -1.69E-46 |
| MS.gene060296 | MS.gene22820 | -0.801869 | 7.35E-49 | -1.69E-46 |
| MS.gene060297 | MS.gene22820 | -0.826209 | 3.08E-54 | -1.69E-46 |
| MS.gene060322 | MS.gene22820 | -0.800191 | 1.62E-48 | -1.69E-46 |
| MS.gene060572 | MS.gene22820 | -0.809316 | 2.01E-50 | -1.69E-46 |
| MS.gene060634 | MS.gene22820 | 0.813724 | 2.21E-51 | -1.69E-46 |
| MS.gene060683 | MS.gene22820 | -0.859401 | 4.24E-63 | -1.69E-46 |
| MS.gene060685 | MS.gene22820 | -0.855001 | 8.45E-62 | -1.69E-46 |
| MS.gene060802 | MS.gene22820 | -0.891926 | 2.54E-74 | -1.69E-46 |
| MS.gene060803 | MS.gene22820 | -0.886491 | 3.26E-72 | -1.69E-46 |
| MS.gene060907 | MS.gene22820 | -0.807211 | 5.65E-50 | -1.69E-46 |
| MS.gene060940 | MS.gene22820 | -0.804249 | 2.37E-49 | -1.69E-46 |
| MS.gene060942 | MS.gene22820 | -0.816494 | 5.37E-52 | -1.69E-46 |
| MS.gene060998 | MS.gene22820 | -0.841958 | 3.46E-58 | -1.69E-46 |
| MS.gene061002 | MS.gene22820 | -0.818499 | 1.90E-52 | -1.69E-46 |
| MS.gene061040 | MS.gene22820 | 0.843258 | 1.57E-58 | -1.69E-46 |
| MS.gene061114 | MS.gene22820 | 0.835903 | 1.28E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22820.t1 | MTR_7g116940 | 100.000 | 148 | 0 | 0 | 1 | 148 | 1 | 148 | 1.05e-109 | 308 |
| MS.gene22820.t1 | MTR_3g062450 | 97.297 | 148 | 4 | 0 | 1 | 148 | 1 | 148 | 2.68e-107 | 302 |
| MS.gene22820.t1 | MTR_5g075580 | 96.622 | 148 | 5 | 0 | 1 | 148 | 1 | 148 | 1.22e-106 | 300 |
| MS.gene22820.t1 | MTR_7g116940 | 95.484 | 155 | 0 | 1 | 1 | 148 | 1 | 155 | 1.34e-106 | 300 |
| MS.gene22820.t1 | MTR_1g021150 | 92.568 | 148 | 11 | 0 | 1 | 148 | 1 | 148 | 5.10e-103 | 291 |
| MS.gene22820.t1 | MTR_4g073240 | 92.568 | 148 | 11 | 0 | 1 | 148 | 1 | 148 | 9.75e-103 | 290 |
| MS.gene22820.t1 | MTR_8g071040 | 92.568 | 148 | 11 | 0 | 1 | 148 | 1 | 148 | 2.45e-102 | 289 |
| MS.gene22820.t1 | MTR_1g021150 | 92.857 | 126 | 9 | 0 | 23 | 148 | 31 | 156 | 8.07e-88 | 253 |
| MS.gene22820.t1 | MTR_5g075580 | 95.798 | 119 | 5 | 0 | 30 | 148 | 1 | 119 | 1.89e-84 | 243 |
| MS.gene22820.t1 | MTR_4g073240 | 93.277 | 119 | 8 | 0 | 30 | 148 | 1 | 119 | 9.70e-82 | 236 |
| MS.gene22820.t1 | MTR_7g116940 | 96.330 | 109 | 4 | 0 | 1 | 109 | 1 | 109 | 3.41e-74 | 218 |
| MS.gene22820.t1 | MTR_8g085690 | 51.724 | 145 | 70 | 0 | 2 | 146 | 23 | 167 | 4.37e-56 | 173 |
| MS.gene22820.t1 | MTR_4g073240 | 91.566 | 83 | 7 | 0 | 66 | 148 | 4 | 86 | 1.80e-53 | 164 |
| MS.gene22820.t1 | MTR_2g078010 | 48.276 | 145 | 75 | 0 | 4 | 148 | 8 | 152 | 1.00e-46 | 149 |
| MS.gene22820.t1 | MTR_8g468530 | 45.890 | 146 | 74 | 1 | 2 | 142 | 21 | 166 | 1.76e-45 | 146 |
| MS.gene22820.t1 | MTR_4g108080 | 45.205 | 146 | 75 | 1 | 2 | 142 | 5 | 150 | 9.32e-45 | 144 |
| MS.gene22820.t1 | MTR_2g078010 | 44.025 | 159 | 75 | 1 | 4 | 148 | 8 | 166 | 7.42e-43 | 139 |
| MS.gene22820.t1 | MTR_3g098780 | 48.611 | 144 | 72 | 2 | 5 | 146 | 6 | 149 | 5.10e-42 | 138 |
| MS.gene22820.t1 | MTR_2g078010 | 47.445 | 137 | 72 | 0 | 4 | 140 | 8 | 144 | 8.73e-42 | 136 |
| MS.gene22820.t1 | MTR_3g098780 | 48.611 | 144 | 72 | 2 | 5 | 146 | 30 | 173 | 1.23e-41 | 138 |
| MS.gene22820.t1 | MTR_4g108080 | 47.619 | 105 | 55 | 0 | 2 | 106 | 5 | 109 | 3.83e-34 | 116 |
| MS.gene22820.t1 | MTR_3g110110 | 40.136 | 147 | 84 | 3 | 5 | 147 | 7 | 153 | 1.00e-33 | 116 |
| MS.gene22820.t1 | MTR_4g076200 | 43.548 | 124 | 70 | 0 | 4 | 127 | 35 | 158 | 1.78e-33 | 116 |
| MS.gene22820.t1 | MTR_1g095510 | 44.882 | 127 | 69 | 1 | 3 | 128 | 43 | 169 | 1.96e-32 | 114 |
| MS.gene22820.t1 | MTR_5g009020 | 40.458 | 131 | 77 | 1 | 4 | 134 | 35 | 164 | 9.63e-32 | 111 |
| MS.gene22820.t1 | MTR_4g076200 | 43.363 | 113 | 64 | 0 | 19 | 131 | 9 | 121 | 1.30e-31 | 110 |
| MS.gene22820.t1 | MTR_4g108080 | 46.789 | 109 | 53 | 1 | 39 | 142 | 42 | 150 | 1.41e-31 | 110 |
| MS.gene22820.t1 | MTR_1g095510 | 47.664 | 107 | 56 | 0 | 22 | 128 | 9 | 115 | 2.12e-31 | 109 |
| MS.gene22820.t1 | MTR_2g078010 | 48.515 | 101 | 52 | 0 | 4 | 104 | 8 | 108 | 5.05e-31 | 107 |
| MS.gene22820.t1 | MTR_1g095510 | 47.748 | 111 | 57 | 1 | 3 | 112 | 43 | 153 | 5.27e-30 | 107 |
| MS.gene22820.t1 | MTR_4g094872 | 36.184 | 152 | 90 | 2 | 1 | 145 | 4 | 155 | 1.91e-29 | 105 |
| MS.gene22820.t1 | MTR_4g063490 | 36.567 | 134 | 71 | 2 | 15 | 134 | 18 | 151 | 7.91e-29 | 103 |
| MS.gene22820.t1 | MTR_5g016630 | 33.553 | 152 | 94 | 2 | 1 | 145 | 4 | 155 | 1.69e-26 | 97.8 |
| MS.gene22820.t1 | MTR_8g028920 | 37.398 | 123 | 75 | 2 | 26 | 146 | 25 | 147 | 2.81e-26 | 98.2 |
| MS.gene22820.t1 | MTR_2g096690 | 34.722 | 144 | 80 | 2 | 15 | 144 | 18 | 161 | 3.26e-26 | 97.4 |
| MS.gene22820.t1 | MTR_5g019480 | 36.029 | 136 | 84 | 2 | 5 | 139 | 36 | 169 | 5.09e-26 | 97.4 |
| MS.gene22820.t1 | MTR_5g019480 | 36.029 | 136 | 84 | 2 | 5 | 139 | 33 | 166 | 5.87e-26 | 97.1 |
| MS.gene22820.t1 | MTR_8g098595 | 36.975 | 119 | 73 | 2 | 30 | 146 | 14 | 132 | 4.18e-25 | 94.4 |
| MS.gene22820.t1 | MTR_5g019480 | 38.393 | 112 | 68 | 1 | 28 | 139 | 8 | 118 | 4.59e-25 | 93.6 |
| MS.gene22820.t1 | MTR_2g096690 | 34.722 | 144 | 79 | 3 | 15 | 144 | 18 | 160 | 8.09e-25 | 93.6 |
| MS.gene22820.t1 | MTR_7g087590 | 34.266 | 143 | 94 | 0 | 4 | 146 | 13 | 155 | 1.47e-24 | 95.5 |
| MS.gene22820.t1 | MTR_8g028920 | 39.623 | 106 | 62 | 2 | 43 | 146 | 3 | 108 | 6.85e-24 | 90.9 |
| MS.gene22820.t1 | MTR_4g106690 | 30.894 | 123 | 83 | 2 | 26 | 146 | 25 | 147 | 3.76e-22 | 87.4 |
| MS.gene22820.t1 | MTR_8g076490 | 39.806 | 103 | 60 | 2 | 1 | 102 | 15 | 116 | 3.29e-20 | 81.6 |
| MS.gene22820.t1 | MTR_5g021260 | 37.864 | 103 | 62 | 2 | 1 | 102 | 15 | 116 | 6.39e-19 | 78.6 |
| MS.gene22820.t1 | MTR_4g121960 | 34.454 | 119 | 68 | 4 | 2 | 114 | 11 | 125 | 4.68e-18 | 79.0 |
| MS.gene22820.t1 | MTR_2g096690 | 38.384 | 99 | 47 | 2 | 15 | 99 | 18 | 116 | 1.19e-17 | 73.9 |
| MS.gene22820.t1 | MTR_7g451800 | 36.066 | 122 | 68 | 3 | 4 | 115 | 38 | 159 | 2.66e-16 | 74.3 |
| MS.gene22820.t1 | MTR_7g047620 | 36.066 | 122 | 68 | 3 | 4 | 115 | 38 | 159 | 2.66e-16 | 74.3 |
| MS.gene22820.t1 | MTR_7g047570 | 36.066 | 122 | 68 | 3 | 4 | 115 | 38 | 159 | 5.26e-16 | 73.6 |
| MS.gene22820.t1 | MTR_7g451770 | 36.066 | 122 | 68 | 3 | 4 | 115 | 38 | 159 | 5.26e-16 | 73.6 |
| MS.gene22820.t1 | MTR_8g023380 | 32.479 | 117 | 70 | 3 | 4 | 115 | 8 | 120 | 1.17e-15 | 71.6 |
| MS.gene22820.t1 | MTR_1g028540 | 71.739 | 46 | 13 | 0 | 102 | 147 | 83 | 128 | 1.48e-14 | 66.2 |
| MS.gene22820.t1 | MTR_4g088835 | 30.667 | 150 | 91 | 4 | 4 | 143 | 672 | 818 | 2.46e-14 | 69.3 |
| MS.gene22820.t1 | MTR_7g023760 | 30.894 | 123 | 75 | 3 | 3 | 115 | 90 | 212 | 2.97e-14 | 68.6 |
| MS.gene22820.t1 | MTR_0274s0030 | 31.707 | 123 | 74 | 3 | 3 | 115 | 113 | 235 | 3.79e-14 | 68.6 |
| MS.gene22820.t1 | MTR_2g013650 | 28.289 | 152 | 96 | 4 | 3 | 144 | 681 | 829 | 2.08e-13 | 66.6 |
| MS.gene22820.t1 | MTR_4g020620 | 32.520 | 123 | 73 | 3 | 3 | 115 | 570 | 692 | 2.44e-13 | 66.6 |
| MS.gene22820.t1 | MTR_4g020620 | 32.520 | 123 | 73 | 3 | 3 | 115 | 628 | 750 | 2.58e-13 | 66.6 |
| MS.gene22820.t1 | MTR_4g086440 | 30.464 | 151 | 89 | 6 | 4 | 143 | 37 | 182 | 2.80e-13 | 65.9 |
| MS.gene22820.t1 | MTR_1g073600 | 26.606 | 109 | 66 | 2 | 33 | 140 | 25 | 120 | 8.39e-13 | 61.6 |
| MS.gene22820.t1 | MTR_2g079270 | 30.081 | 123 | 76 | 3 | 3 | 115 | 306 | 428 | 5.48e-12 | 62.4 |
| MS.gene22820.t1 | MTR_1g092460 | 28.455 | 123 | 78 | 3 | 3 | 115 | 176 | 298 | 6.61e-12 | 62.4 |
| MS.gene22820.t1 | MTR_1g092465 | 28.947 | 152 | 82 | 5 | 3 | 144 | 241 | 376 | 7.47e-12 | 62.0 |
| MS.gene22820.t1 | MTR_1g112730 | 29.508 | 122 | 76 | 3 | 4 | 115 | 856 | 977 | 1.60e-11 | 61.2 |
| MS.gene22820.t1 | MTR_2g018540 | 32.000 | 125 | 73 | 3 | 3 | 115 | 107 | 231 | 3.08e-11 | 60.1 |
| MS.gene22820.t1 | MTR_1g092440 | 33.696 | 92 | 51 | 3 | 34 | 115 | 411 | 502 | 4.24e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22820.t1 | AT1G64230 | 96.622 | 148 | 5 | 0 | 1 | 148 | 1 | 148 | 2.68e-107 | 302 |
| MS.gene22820.t1 | AT1G64230 | 96.622 | 148 | 5 | 0 | 1 | 148 | 1 | 148 | 2.68e-107 | 302 |
| MS.gene22820.t1 | AT5G53300 | 96.622 | 148 | 5 | 0 | 1 | 148 | 1 | 148 | 7.78e-107 | 301 |
| MS.gene22820.t1 | AT5G53300 | 96.622 | 148 | 5 | 0 | 1 | 148 | 1 | 148 | 7.78e-107 | 301 |
| MS.gene22820.t1 | AT5G53300 | 96.622 | 148 | 5 | 0 | 1 | 148 | 1 | 148 | 7.78e-107 | 301 |
| MS.gene22820.t1 | AT4G27960 | 95.946 | 148 | 6 | 0 | 1 | 148 | 1 | 148 | 2.04e-106 | 300 |
| MS.gene22820.t1 | AT5G41700 | 95.946 | 148 | 6 | 0 | 1 | 148 | 1 | 148 | 2.84e-106 | 299 |
| MS.gene22820.t1 | AT5G41700 | 95.946 | 148 | 6 | 0 | 1 | 148 | 1 | 148 | 2.84e-106 | 299 |
| MS.gene22820.t1 | AT5G41700 | 95.946 | 148 | 6 | 0 | 1 | 148 | 1 | 148 | 2.84e-106 | 299 |
| MS.gene22820.t1 | AT4G27960 | 95.946 | 148 | 6 | 0 | 1 | 148 | 31 | 178 | 5.95e-106 | 300 |
| MS.gene22820.t1 | AT3G08690 | 94.595 | 148 | 8 | 0 | 1 | 148 | 1 | 148 | 7.46e-106 | 298 |
| MS.gene22820.t1 | AT3G08690 | 94.595 | 148 | 8 | 0 | 1 | 148 | 1 | 148 | 7.46e-106 | 298 |
| MS.gene22820.t1 | AT5G41700 | 94.631 | 149 | 7 | 1 | 1 | 148 | 1 | 149 | 1.64e-103 | 292 |
| MS.gene22820.t1 | AT1G64230 | 90.446 | 157 | 6 | 1 | 1 | 148 | 1 | 157 | 8.67e-103 | 291 |
| MS.gene22820.t1 | AT5G56150 | 89.189 | 148 | 16 | 0 | 1 | 148 | 1 | 148 | 1.07e-99 | 283 |
| MS.gene22820.t1 | AT1G64230 | 74.737 | 190 | 6 | 1 | 1 | 148 | 1 | 190 | 2.03e-98 | 281 |
| MS.gene22820.t1 | AT1G64230 | 74.737 | 190 | 6 | 1 | 1 | 148 | 1 | 190 | 2.03e-98 | 281 |
| MS.gene22820.t1 | AT2G16740 | 86.395 | 147 | 20 | 0 | 1 | 147 | 1 | 147 | 4.15e-97 | 276 |
| MS.gene22820.t1 | AT3G08700 | 79.195 | 149 | 30 | 1 | 1 | 148 | 1 | 149 | 5.79e-87 | 251 |
| MS.gene22820.t1 | AT3G08700 | 79.195 | 149 | 30 | 1 | 1 | 148 | 1 | 149 | 5.79e-87 | 251 |
| MS.gene22820.t1 | AT5G41700 | 96.154 | 104 | 4 | 0 | 1 | 104 | 1 | 104 | 3.41e-72 | 213 |
| MS.gene22820.t1 | AT5G53300 | 94.495 | 109 | 4 | 1 | 1 | 107 | 1 | 109 | 1.09e-71 | 211 |
| MS.gene22820.t1 | AT5G56150 | 87.379 | 103 | 13 | 0 | 1 | 103 | 1 | 103 | 1.08e-65 | 196 |
| MS.gene22820.t1 | AT3G13550 | 48.276 | 145 | 75 | 0 | 2 | 146 | 37 | 181 | 7.46e-53 | 166 |
| MS.gene22820.t1 | AT1G16890 | 49.655 | 145 | 73 | 0 | 4 | 148 | 8 | 152 | 3.79e-48 | 152 |
| MS.gene22820.t1 | AT1G78870 | 48.966 | 145 | 74 | 0 | 4 | 148 | 8 | 152 | 3.02e-47 | 150 |
| MS.gene22820.t1 | AT5G62540 | 50.000 | 134 | 67 | 0 | 2 | 135 | 5 | 138 | 3.01e-46 | 147 |
| MS.gene22820.t1 | AT1G16890 | 47.403 | 154 | 72 | 1 | 4 | 148 | 8 | 161 | 2.07e-45 | 146 |
| MS.gene22820.t1 | AT1G14400 | 45.890 | 146 | 74 | 1 | 2 | 142 | 5 | 150 | 3.78e-45 | 145 |
| MS.gene22820.t1 | AT1G14400 | 45.890 | 146 | 74 | 1 | 2 | 142 | 5 | 150 | 3.78e-45 | 145 |
| MS.gene22820.t1 | AT2G02760 | 45.205 | 146 | 75 | 1 | 2 | 142 | 5 | 150 | 8.11e-45 | 144 |
| MS.gene22820.t1 | AT2G02760 | 45.205 | 146 | 75 | 1 | 2 | 142 | 5 | 150 | 8.11e-45 | 144 |
| MS.gene22820.t1 | AT2G02760 | 45.205 | 146 | 75 | 1 | 2 | 142 | 5 | 150 | 8.11e-45 | 144 |
| MS.gene22820.t1 | AT2G02760 | 45.205 | 146 | 75 | 1 | 2 | 142 | 5 | 150 | 8.11e-45 | 144 |
| MS.gene22820.t1 | AT1G36340 | 48.276 | 145 | 74 | 1 | 2 | 146 | 9 | 152 | 1.49e-44 | 143 |
| MS.gene22820.t1 | AT1G36340 | 48.276 | 145 | 74 | 1 | 2 | 146 | 9 | 152 | 1.49e-44 | 143 |
| MS.gene22820.t1 | AT3G13550 | 50.000 | 114 | 57 | 0 | 2 | 115 | 37 | 150 | 1.16e-41 | 137 |
| MS.gene22820.t1 | AT1G16890 | 52.101 | 119 | 57 | 0 | 30 | 148 | 1 | 119 | 5.05e-41 | 133 |
| MS.gene22820.t1 | AT1G78870 | 52.101 | 119 | 57 | 0 | 30 | 148 | 1 | 119 | 6.28e-41 | 133 |
| MS.gene22820.t1 | AT5G50870 | 45.833 | 144 | 76 | 2 | 5 | 146 | 6 | 149 | 4.42e-39 | 130 |
| MS.gene22820.t1 | AT1G78870 | 51.667 | 120 | 57 | 1 | 30 | 148 | 1 | 120 | 4.79e-39 | 128 |
| MS.gene22820.t1 | AT2G32790 | 48.684 | 152 | 69 | 4 | 2 | 148 | 30 | 177 | 8.69e-36 | 122 |
| MS.gene22820.t1 | AT5G50870 | 42.581 | 155 | 76 | 3 | 5 | 146 | 6 | 160 | 1.18e-35 | 122 |
| MS.gene22820.t1 | AT3G24515 | 44.586 | 157 | 74 | 3 | 3 | 146 | 8 | 164 | 2.20e-35 | 126 |
| MS.gene22820.t1 | AT3G24515 | 46.721 | 122 | 61 | 1 | 29 | 146 | 68 | 189 | 1.18e-32 | 119 |
| MS.gene22820.t1 | AT5G25760 | 38.776 | 147 | 86 | 3 | 5 | 147 | 7 | 153 | 2.64e-32 | 112 |
| MS.gene22820.t1 | AT5G25760 | 38.776 | 147 | 86 | 3 | 5 | 147 | 7 | 153 | 2.64e-32 | 112 |
| MS.gene22820.t1 | AT1G78870 | 48.571 | 105 | 54 | 0 | 4 | 108 | 8 | 112 | 5.12e-32 | 110 |
| MS.gene22820.t1 | AT3G20060 | 41.935 | 124 | 72 | 0 | 4 | 127 | 39 | 162 | 1.81e-30 | 108 |
| MS.gene22820.t1 | AT1G50490 | 42.742 | 124 | 71 | 0 | 4 | 127 | 38 | 161 | 6.05e-30 | 107 |
| MS.gene22820.t1 | AT3G20060 | 42.727 | 110 | 63 | 0 | 22 | 131 | 12 | 121 | 7.02e-29 | 103 |
| MS.gene22820.t1 | AT3G55380 | 37.313 | 134 | 70 | 2 | 15 | 134 | 19 | 152 | 1.78e-28 | 103 |
| MS.gene22820.t1 | AT2G46030 | 36.486 | 148 | 91 | 3 | 1 | 146 | 1 | 147 | 2.63e-28 | 103 |
| MS.gene22820.t1 | AT2G46030 | 36.486 | 148 | 91 | 3 | 1 | 146 | 1 | 147 | 2.63e-28 | 103 |
| MS.gene22820.t1 | AT2G46030 | 36.486 | 148 | 91 | 3 | 1 | 146 | 73 | 219 | 6.48e-28 | 103 |
| MS.gene22820.t1 | AT2G46030 | 39.024 | 123 | 73 | 2 | 26 | 146 | 28 | 150 | 9.29e-28 | 102 |
| MS.gene22820.t1 | AT2G46030 | 39.024 | 123 | 73 | 2 | 26 | 146 | 28 | 150 | 9.29e-28 | 102 |
| MS.gene22820.t1 | AT5G05080 | 37.063 | 143 | 90 | 0 | 4 | 146 | 13 | 155 | 1.41e-27 | 103 |
| MS.gene22820.t1 | AT5G05080 | 37.063 | 143 | 90 | 0 | 4 | 146 | 13 | 155 | 1.41e-27 | 103 |
| MS.gene22820.t1 | AT5G05080 | 37.063 | 143 | 90 | 0 | 4 | 146 | 13 | 155 | 1.41e-27 | 103 |
| MS.gene22820.t1 | AT5G05080 | 37.063 | 143 | 90 | 0 | 4 | 146 | 13 | 155 | 1.41e-27 | 103 |
| MS.gene22820.t1 | AT3G57870 | 34.868 | 152 | 92 | 2 | 1 | 145 | 5 | 156 | 2.05e-27 | 100 |
| MS.gene22820.t1 | AT5G59300 | 35.417 | 144 | 79 | 2 | 15 | 144 | 18 | 161 | 7.37e-27 | 99.0 |
| MS.gene22820.t1 | AT3G46460 | 34.722 | 144 | 80 | 2 | 15 | 144 | 18 | 161 | 1.21e-26 | 98.6 |
| MS.gene22820.t1 | AT5G41340 | 38.211 | 123 | 74 | 2 | 26 | 146 | 25 | 147 | 1.28e-26 | 99.0 |
| MS.gene22820.t1 | AT1G63800 | 38.211 | 123 | 74 | 2 | 26 | 146 | 10 | 132 | 1.72e-26 | 98.2 |
| MS.gene22820.t1 | AT1G63800 | 38.211 | 123 | 74 | 2 | 26 | 146 | 25 | 147 | 2.00e-26 | 98.6 |
| MS.gene22820.t1 | AT4G36800 | 36.496 | 137 | 82 | 3 | 5 | 139 | 34 | 167 | 2.10e-26 | 98.6 |
| MS.gene22820.t1 | AT4G36800 | 36.496 | 137 | 82 | 3 | 5 | 139 | 34 | 167 | 2.10e-26 | 98.6 |
| MS.gene22820.t1 | AT5G41340 | 40.385 | 104 | 60 | 2 | 45 | 146 | 9 | 112 | 1.35e-23 | 90.1 |
| MS.gene22820.t1 | AT2G18600 | 34.307 | 137 | 85 | 3 | 5 | 139 | 35 | 168 | 5.79e-23 | 89.7 |
| MS.gene22820.t1 | AT2G18600 | 34.307 | 137 | 85 | 3 | 5 | 139 | 35 | 168 | 5.79e-23 | 89.7 |
| MS.gene22820.t1 | AT3G55380 | 29.586 | 169 | 71 | 3 | 15 | 135 | 19 | 187 | 2.77e-21 | 85.5 |
| MS.gene22820.t1 | AT3G17000 | 36.975 | 119 | 65 | 4 | 2 | 114 | 12 | 126 | 5.75e-20 | 84.0 |
| MS.gene22820.t1 | AT1G75440 | 39.815 | 108 | 59 | 3 | 1 | 107 | 15 | 117 | 6.84e-20 | 80.9 |
| MS.gene22820.t1 | AT1G45050 | 38.835 | 103 | 61 | 2 | 1 | 102 | 15 | 116 | 2.30e-19 | 79.7 |
| MS.gene22820.t1 | AT5G42990 | 39.806 | 103 | 60 | 2 | 1 | 102 | 15 | 116 | 3.84e-19 | 79.0 |
| MS.gene22820.t1 | AT4G36410 | 36.111 | 108 | 63 | 3 | 1 | 107 | 15 | 117 | 2.69e-18 | 77.0 |
| MS.gene22820.t1 | AT3G46460 | 30.631 | 111 | 64 | 1 | 47 | 144 | 9 | 119 | 5.33e-17 | 72.4 |
| MS.gene22820.t1 | AT3G46460 | 30.631 | 111 | 64 | 1 | 47 | 144 | 9 | 119 | 5.33e-17 | 72.4 |
| MS.gene22820.t1 | AT1G17280 | 34.188 | 117 | 68 | 3 | 4 | 115 | 8 | 120 | 6.65e-17 | 74.7 |
| MS.gene22820.t1 | AT1G17280 | 34.188 | 117 | 68 | 3 | 4 | 115 | 8 | 120 | 6.65e-17 | 74.7 |
| MS.gene22820.t1 | AT1G17280 | 34.188 | 117 | 68 | 3 | 4 | 115 | 8 | 120 | 6.65e-17 | 74.7 |
| MS.gene22820.t1 | AT1G17280 | 34.188 | 117 | 68 | 3 | 4 | 115 | 8 | 120 | 6.65e-17 | 74.7 |
| MS.gene22820.t1 | AT1G17280 | 34.188 | 117 | 68 | 3 | 4 | 115 | 8 | 120 | 6.65e-17 | 74.7 |
| MS.gene22820.t1 | AT1G17280 | 34.188 | 117 | 68 | 3 | 4 | 115 | 8 | 120 | 6.65e-17 | 74.7 |
| MS.gene22820.t1 | AT1G17280 | 34.188 | 117 | 68 | 3 | 4 | 115 | 8 | 120 | 6.65e-17 | 74.7 |
| MS.gene22820.t1 | AT1G17280 | 34.188 | 117 | 68 | 3 | 4 | 115 | 8 | 120 | 6.65e-17 | 74.7 |
| MS.gene22820.t1 | AT5G50430 | 34.188 | 117 | 68 | 3 | 4 | 115 | 8 | 120 | 8.23e-17 | 74.7 |
| MS.gene22820.t1 | AT5G50430 | 34.188 | 117 | 68 | 3 | 4 | 115 | 8 | 120 | 8.23e-17 | 74.7 |
| MS.gene22820.t1 | AT1G17280 | 31.707 | 123 | 69 | 3 | 4 | 115 | 8 | 126 | 1.59e-15 | 71.2 |
| MS.gene22820.t1 | AT1G45050 | 35.955 | 89 | 55 | 2 | 1 | 88 | 15 | 102 | 9.85e-13 | 61.2 |
| MS.gene22820.t1 | AT3G15355 | 28.289 | 152 | 96 | 4 | 3 | 144 | 334 | 482 | 1.24e-11 | 61.6 |
| MS.gene22820.t1 | AT1G53025 | 30.328 | 122 | 75 | 3 | 4 | 115 | 274 | 395 | 3.33e-11 | 60.5 |
| MS.gene22820.t1 | AT1G53025 | 30.328 | 122 | 75 | 3 | 4 | 115 | 274 | 395 | 3.44e-11 | 60.5 |
| MS.gene22820.t1 | AT2G33770 | 31.183 | 93 | 61 | 2 | 4 | 94 | 665 | 756 | 7.26e-11 | 59.3 |
| MS.gene22820.t1 | AT1G53023 | 31.148 | 122 | 74 | 3 | 4 | 115 | 60 | 181 | 9.84e-11 | 58.5 |
Find 58 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACCATTGCTGTTGATATT+TGG | 0.157251 | 7.4:+1390855 | None:intergenic |
| TCCTCTTGCAGGTTGCATTT+AGG | 0.232826 | 7.4:-1390893 | MS.gene22820:intron |
| TACCATTGCTGTTGATATTT+GGG | 0.310209 | 7.4:+1390856 | None:intergenic |
| TCATTGGCAAGCAACTATAA+TGG | 0.311891 | 7.4:-1391209 | MS.gene22820:CDS |
| CCGAGCAGTGGTTTCATACT+TGG | 0.316742 | 7.4:+1389863 | None:intergenic |
| CCCCGCTTTGACAATATCTA+AGG | 0.320617 | 7.4:-1390799 | MS.gene22820:intron |
| TTGTACATATGAGCTATTTC+AGG | 0.338906 | 7.4:+1389897 | None:intergenic |
| TCAGGCACTAAGGGATCATC+TGG | 0.351772 | 7.4:+1389915 | None:intergenic |
| CCTCCGGCATAAGGGCTATC+GGG | 0.361129 | 7.4:+1391181 | None:intergenic |
| CATTGGCAAGCAACTATAAT+GGG | 0.363377 | 7.4:-1391208 | MS.gene22820:CDS |
| ATCCATTTGTTCCCTGTTGA+CGG | 0.377667 | 7.4:-1389946 | MS.gene22820:CDS |
| CTGGGTTTGGATCCGTCAAC+AGG | 0.381343 | 7.4:+1389934 | None:intergenic |
| AATACCTTGGGTGGCTTGAA+TGG | 0.396161 | 7.4:+1391121 | None:intergenic |
| CATTTGTCTTGATATCTTGA+AGG | 0.425170 | 7.4:-1390832 | MS.gene22820:CDS |
| TGAAACATGTCTTCTGCTAC+AGG | 0.438785 | 7.4:+1391229 | None:intergenic |
| GGTGGCTTGAATGGATAATC+AGG | 0.441447 | 7.4:+1391130 | None:intergenic |
| CCTCCAACCTCTTGCAGCGC+TGG | 0.445639 | 7.4:-1392417 | MS.gene22820:intron |
| ATGAGCTATTTCAGGCACTA+AGG | 0.452215 | 7.4:+1389905 | None:intergenic |
| ATCCGTCAACAGGGAACAAA+TGG | 0.455293 | 7.4:+1389944 | None:intergenic |
| TAGCAGAAGACATGTTTCAT+TGG | 0.456534 | 7.4:-1391225 | MS.gene22820:CDS |
| ACCTTAGATATTGTCAAAGC+GGG | 0.466865 | 7.4:+1390798 | None:intergenic |
| TCCTCCGGCATAAGGGCTAT+CGG | 0.475958 | 7.4:+1391180 | None:intergenic |
| ATGAAACCACTGCTCGGAGC+TGG | 0.483029 | 7.4:-1389857 | MS.gene22820:CDS |
| TTCCTTGAGGATCCGCTTGG+AGG | 0.486492 | 7.4:+1392461 | None:intergenic |
| ACTAAGGGATCATCTGGGTT+TGG | 0.496633 | 7.4:+1389921 | None:intergenic |
| GATATTTGGGTGGAAAACTT+TGG | 0.515591 | 7.4:+1390869 | None:intergenic |
| GAGGATCCGCTTGGAGGCCA+TGG | 0.529842 | 7.4:+1392467 | None:intergenic |
| TTACCAGCGCTGCAAGAGGT+TGG | 0.534725 | 7.4:+1392414 | None:intergenic |
| CTCCGGCATAAGGGCTATCG+GGG | 0.536589 | 7.4:+1391182 | None:intergenic |
| TGGACTCAGAAGTATGCAAT+GGG | 0.546656 | 7.4:-1389837 | MS.gene22820:CDS |
| GAAGGTCCTTGAGTTCCTTG+AGG | 0.550730 | 7.4:+1392448 | None:intergenic |
| CTCATATGTACAAGACAGAC+AGG | 0.552335 | 7.4:-1389887 | MS.gene22820:CDS |
| CTGAGTCCAGCTCCGAGCAG+TGG | 0.563687 | 7.4:+1389851 | None:intergenic |
| TGAGCTATTTCAGGCACTAA+GGG | 0.565316 | 7.4:+1389906 | None:intergenic |
| GAGTTCCTTGAGGATCCGCT+TGG | 0.568666 | 7.4:+1392458 | None:intergenic |
| CCAGCGCTGCAAGAGGTTGG+AGG | 0.569494 | 7.4:+1392417 | None:intergenic |
| CTGGACTCAGAAGTATGCAA+TGG | 0.576388 | 7.4:-1389838 | MS.gene22820:CDS |
| CCGGCATAAGGGCTATCGGG+GGG | 0.578253 | 7.4:+1391184 | None:intergenic |
| CATTGCTGTTGATATTTGGG+TGG | 0.580692 | 7.4:+1390859 | None:intergenic |
| CACCCAAATATCAACAGCAA+TGG | 0.585534 | 7.4:-1390858 | MS.gene22820:CDS |
| CCCGATAGCCCTTATGCCGG+AGG | 0.589705 | 7.4:-1391181 | MS.gene22820:CDS |
| ATAATCAGGAGGAAAATGAA+TGG | 0.590246 | 7.4:+1391144 | None:intergenic |
| TCCGGCATAAGGGCTATCGG+GGG | 0.592985 | 7.4:+1391183 | None:intergenic |
| AAAATTACCAGCGCTGCAAG+AGG | 0.599526 | 7.4:+1392410 | None:intergenic |
| CCAAGTATGAAACCACTGCT+CGG | 0.606579 | 7.4:-1389863 | MS.gene22820:CDS |
| TTGATATCTTGAAGGAGCAG+TGG | 0.609569 | 7.4:-1390824 | MS.gene22820:CDS |
| AGGTTGGAGGATCTTTCTGA+AGG | 0.613443 | 7.4:+1392430 | None:intergenic |
| ACAAAGTCCAATACCTTGGG+TGG | 0.615790 | 7.4:+1391112 | None:intergenic |
| GCGGATCCTCAAGGAACTCA+AGG | 0.617012 | 7.4:-1392454 | MS.gene22820:CDS |
| GGCCTCCAAGCGGATCCTCA+AGG | 0.623432 | 7.4:-1392463 | MS.gene22820:CDS |
| CAGGCACTAAGGGATCATCT+GGG | 0.628144 | 7.4:+1389916 | None:intergenic |
| AACCTTAGATATTGTCAAAG+CGG | 0.632820 | 7.4:+1390797 | None:intergenic |
| GAAACATGTCTTCTGCTACA+GGG | 0.642755 | 7.4:+1391230 | None:intergenic |
| TGGGTTTGGATCCGTCAACA+GGG | 0.654519 | 7.4:+1389935 | None:intergenic |
| GGCTTGAATGGATAATCAGG+AGG | 0.662651 | 7.4:+1391133 | None:intergenic |
| TTATCCATTCAAGCCACCCA+AGG | 0.669594 | 7.4:-1391125 | MS.gene22820:intron |
| CCTTAGATATTGTCAAAGCG+GGG | 0.699087 | 7.4:+1390799 | None:intergenic |
| CCAATTCCATGGCCTCCAAG+CGG | 0.707253 | 7.4:-1392473 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTGTTAATATTGTTAA+AGG | - | chr7.4:1390117-1390136 | MS.gene22820:intron | 10.0% |
| !! | TTAGTTATACAATCATATAT+AGG | + | chr7.4:1390420-1390439 | None:intergenic | 15.0% |
| !! | AAAAAAAAATTTAGCACAAG+TGG | + | chr7.4:1391567-1391586 | None:intergenic | 20.0% |
| !! | ACCAATTTCAAAAAGATTAT+TGG | - | chr7.4:1391873-1391892 | MS.gene22820:intron | 20.0% |
| !! | TAGAAAAAGTTTAGTATGTT+TGG | - | chr7.4:1390173-1390192 | MS.gene22820:intron | 20.0% |
| !!! | ACCAATAATCTTTTTGAAAT+TGG | + | chr7.4:1391877-1391896 | None:intergenic | 20.0% |
| !!! | ATTTTGCACTTATATCTATA+TGG | - | chr7.4:1389968-1389987 | MS.gene22820:intron | 20.0% |
| !!! | TAAATATATTTTTGCAACTC+AGG | + | chr7.4:1390923-1390942 | None:intergenic | 20.0% |
| !!! | TGAGTTGAAAAATAAATTCA+AGG | + | chr7.4:1390397-1390416 | None:intergenic | 20.0% |
| !!! | TTTTGCACTTATATCTATAT+GGG | - | chr7.4:1389969-1389988 | MS.gene22820:intron | 20.0% |
| ! | AAAAGTTTAGTATGTTTGGT+TGG | - | chr7.4:1390177-1390196 | MS.gene22820:intron | 25.0% |
| ! | AATTCAGTTATATTTGTCTG+TGG | - | chr7.4:1390804-1390823 | MS.gene22820:CDS | 25.0% |
| ! | ATAAAAGAATGACACACTAA+GGG | + | chr7.4:1392231-1392250 | None:intergenic | 25.0% |
| ! | ATTCATCATAAATGCAAAAC+TGG | + | chr7.4:1391849-1391868 | None:intergenic | 25.0% |
| ! | CGTTCTATTAAGAATTATCA+TGG | - | chr7.4:1390769-1390788 | MS.gene22820:intron | 25.0% |
| ! | TAACTTGAACTAGAATTTGT+AGG | - | chr7.4:1390518-1390537 | MS.gene22820:intron | 25.0% |
| ! | TAGATCAGAATAAATTCTTG+AGG | + | chr7.4:1390332-1390351 | None:intergenic | 25.0% |
| !! | AAATACATTTTTGCAACTCT+AGG | - | chr7.4:1391607-1391626 | MS.gene22820:intron | 25.0% |
| !! | ATTACTACTGTTTCTTAAGT+GGG | - | chr7.4:1392292-1392311 | MS.gene22820:intron | 25.0% |
| !! | TATTACTACTGTTTCTTAAG+TGG | - | chr7.4:1392291-1392310 | MS.gene22820:intron | 25.0% |
| !! | TTTTGTTGATGTGATACAAT+TGG | - | chr7.4:1392162-1392181 | MS.gene22820:intron | 25.0% |
| !!! | ATGTGTTGATGATGTTTATT+CGG | - | chr7.4:1392019-1392038 | MS.gene22820:intron | 25.0% |
| !!! | GAAATTGATTTTGACATGTT+TGG | - | chr7.4:1390281-1390300 | MS.gene22820:intron | 25.0% |
| !!! | GTATGCTTTGAAATATCTTA+AGG | - | chr7.4:1392067-1392086 | MS.gene22820:intron | 25.0% |
| !!! | TTGTTCAATACACTTTTTCA+TGG | - | chr7.4:1390577-1390596 | MS.gene22820:intron | 25.0% |
| AAAACAAAGTCCAATACCTT+GGG | + | chr7.4:1391192-1391211 | None:intergenic | 30.0% | |
| AACCTTAGATATTGTCAAAG+CGG | + | chr7.4:1391504-1391523 | None:intergenic | 30.0% | |
| ATAATCAGGAGGAAAATGAA+TGG | + | chr7.4:1391157-1391176 | None:intergenic | 30.0% | |
| CATTTGTCTTGATATCTTGA+AGG | - | chr7.4:1391466-1391485 | MS.gene22820:intron | 30.0% | |
| CTTTACCTCAAACTTACTTT+CGG | - | chr7.4:1390450-1390469 | MS.gene22820:intron | 30.0% | |
| GATAAAAGAATGACACACTA+AGG | + | chr7.4:1392232-1392251 | None:intergenic | 30.0% | |
| GGACTTTATTAGGTTTACAA+AGG | - | chr7.4:1391666-1391685 | MS.gene22820:intron | 30.0% | |
| TAAAAGAATGACACACTAAG+GGG | + | chr7.4:1392230-1392249 | None:intergenic | 30.0% | |
| TAACAAACCCATGATACAAA+TGG | + | chr7.4:1390009-1390028 | None:intergenic | 30.0% | |
| TCTTAATAGAACGCAAAAGA+GGG | + | chr7.4:1390762-1390781 | None:intergenic | 30.0% | |
| TGGTAACTTTGGACTTTATT+AGG | - | chr7.4:1391656-1391675 | MS.gene22820:intron | 30.0% | |
| TTACAAGACATGCATCTAAT+TGG | + | chr7.4:1390839-1390858 | None:intergenic | 30.0% | |
| TTCTTAATAGAACGCAAAAG+AGG | + | chr7.4:1390763-1390782 | None:intergenic | 30.0% | |
| ! | AAAAACAGGTTTTCAGCTTT+AGG | + | chr7.4:1390723-1390742 | None:intergenic | 30.0% |
| ! | CGTTTTTCCATTTGTATCAT+GGG | - | chr7.4:1389999-1390018 | MS.gene22820:intron | 30.0% |
| ! | GATCTAAAGCTAGAATTTGT+AGG | - | chr7.4:1390346-1390365 | MS.gene22820:intron | 30.0% |
| ! | TAAAGCTGAAAACCTGTTTT+TGG | - | chr7.4:1390722-1390741 | MS.gene22820:intron | 30.0% |
| ! | TACCATTGCTGTTGATATTT+GGG | + | chr7.4:1391445-1391464 | None:intergenic | 30.0% |
| ! | TCTTTTATCATTGCAATGCA+TGG | - | chr7.4:1392243-1392262 | MS.gene22820:intron | 30.0% |
| ! | TTGTACATATGAGCTATTTC+AGG | + | chr7.4:1392404-1392423 | None:intergenic | 30.0% |
| !! | ATGTTTGATTTCACTTTTGG+AGG | - | chr7.4:1390243-1390262 | MS.gene22820:intron | 30.0% |
| !! | GACATGTTTGATTTCACTTT+TGG | - | chr7.4:1390240-1390259 | MS.gene22820:intron | 30.0% |
| !! | GTGGTGTTACAAATTGATTA+TGG | + | chr7.4:1390476-1390495 | None:intergenic | 30.0% |
| !! | TCGTTTTTCCATTTGTATCA+TGG | - | chr7.4:1389998-1390017 | MS.gene22820:intron | 30.0% |
| !! | TTTCTGTTGCTAGTTTGTTT+AGG | - | chr7.4:1390047-1390066 | MS.gene22820:intron | 30.0% |
| !!! | TTTGTTTTGCTTGACATATC+AGG | - | chr7.4:1391204-1391223 | MS.gene22820:CDS | 30.0% |
| AATTCATAGATCCAAGCATG+AGG | + | chr7.4:1389951-1389970 | None:intergenic | 35.0% | |
| ACCTAATAAAGTCCAACTTC+AGG | + | chr7.4:1391929-1391948 | None:intergenic | 35.0% | |
| ACCTTAGATATTGTCAAAGC+GGG | + | chr7.4:1391503-1391522 | None:intergenic | 35.0% | |
| ATTCATAGATCCAAGCATGA+GGG | + | chr7.4:1389950-1389969 | None:intergenic | 35.0% | |
| ATTCGTCGTAAATGCATAAC+TGG | + | chr7.4:1392121-1392140 | None:intergenic | 35.0% | |
| CAAAACAAAGTCCAATACCT+TGG | + | chr7.4:1391193-1391212 | None:intergenic | 35.0% | |
| CATTGGCAAGCAACTATAAT+GGG | - | chr7.4:1391090-1391109 | MS.gene22820:intron | 35.0% | |
| GAAAGACCTTACAAGTAAAC+TGG | + | chr7.4:1392099-1392118 | None:intergenic | 35.0% | |
| GAGGAGGTTAAGTATCATAA+AGG | + | chr7.4:1391273-1391292 | None:intergenic | 35.0% | |
| GATATTTGGGTGGAAAACTT+TGG | + | chr7.4:1391432-1391451 | None:intergenic | 35.0% | |
| GATGTTTACTCTGCATAATC+AGG | - | chr7.4:1391760-1391779 | MS.gene22820:intron | 35.0% | |
| GATGTTTATTCGGCATAATC+TGG | - | chr7.4:1392029-1392048 | MS.gene22820:intron | 35.0% | |
| GGAATTTATAGCGACAACTT+AGG | + | chr7.4:1392204-1392223 | None:intergenic | 35.0% | |
| TAGCAGAAGACATGTTTCAT+TGG | - | chr7.4:1391073-1391092 | MS.gene22820:intron | 35.0% | |
| TCATTGGCAAGCAACTATAA+TGG | - | chr7.4:1391089-1391108 | MS.gene22820:intron | 35.0% | |
| TCCTGAAGTTGGACTTTATT+AGG | - | chr7.4:1391925-1391944 | MS.gene22820:intron | 35.0% | |
| TCTGTGTGTGTTTAGTTATG+TGG | + | chr7.4:1390495-1390514 | None:intergenic | 35.0% | |
| TTGAGTTAACGAGTTAAGCA+TGG | + | chr7.4:1391530-1391549 | None:intergenic | 35.0% | |
| TTGGAGGATGCAAAATTGAT+TGG | - | chr7.4:1390259-1390278 | MS.gene22820:intron | 35.0% | |
| ! | CTACCATTGCTGTTGATATT+TGG | + | chr7.4:1391446-1391465 | None:intergenic | 35.0% |
| ! | GCAGCAAAATTTGTTTGTAG+AGG | - | chr7.4:1390212-1390231 | MS.gene22820:intron | 35.0% |
| ! | GGTTTGTGTTTGGTTATTTC+AGG | - | chr7.4:1392322-1392341 | MS.gene22820:intron | 35.0% |
| ! | TCCAAATACAAGCTTTGATC+TGG | - | chr7.4:1391327-1391346 | MS.gene22820:intron | 35.0% |
| ! | TTTAACCTTTTTCCTCTTGC+AGG | - | chr7.4:1391394-1391413 | MS.gene22820:intron | 35.0% |
| !! | TCTAGGATATGTGTGTGTTT+TGG | - | chr7.4:1391624-1391643 | MS.gene22820:intron | 35.0% |
| AACCTTCACAATCCTGAAGT+TGG | - | chr7.4:1391914-1391933 | MS.gene22820:intron | 40.0% | |
| AAGCAGAAAATGGGGTTTGA+GGG | + | chr7.4:1389920-1389939 | None:intergenic | 40.0% | |
| ACTTAACCTCCTCTATTTCC+TGG | - | chr7.4:1391280-1391299 | MS.gene22820:intron | 40.0% | |
| ATCCATTTGTTCCCTGTTGA+CGG | - | chr7.4:1392352-1392371 | MS.gene22820:intron | 40.0% | |
| CACCCAAATATCAACAGCAA+TGG | - | chr7.4:1391440-1391459 | MS.gene22820:intron | 40.0% | |
| CCTTAGATATTGTCAAAGCG+GGG | + | chr7.4:1391502-1391521 | None:intergenic | 40.0% | |
| CGACAACTTAGGAATTGTGA+CGG | + | chr7.4:1392193-1392212 | None:intergenic | 40.0% | |
| CTCATATGTACAAGACAGAC+AGG | - | chr7.4:1392411-1392430 | MS.gene22820:intron | 40.0% | |
| GAAACATGTCTTCTGCTACA+GGG | + | chr7.4:1391071-1391090 | None:intergenic | 40.0% | |
| GCCAGATCAAAGCTTGTATT+TGG | + | chr7.4:1391331-1391350 | None:intergenic | 40.0% | |
| GGTAACTAGAAAAACTCCTC+CGG | + | chr7.4:1391136-1391155 | None:intergenic | 40.0% | |
| TAGCTGCCAGTTTACTTGTA+AGG | - | chr7.4:1392090-1392109 | MS.gene22820:intron | 40.0% | |
| TATGGCCGAAAGTAAGTTTG+AGG | + | chr7.4:1390458-1390477 | None:intergenic | 40.0% | |
| TGAAACATGTCTTCTGCTAC+AGG | + | chr7.4:1391072-1391091 | None:intergenic | 40.0% | |
| TTCATAGATCCAAGCATGAG+GGG | + | chr7.4:1389949-1389968 | None:intergenic | 40.0% | |
| TTGATATCTTGAAGGAGCAG+TGG | - | chr7.4:1391474-1391493 | MS.gene22820:intron | 40.0% | |
| ! | ACTACTGTTTCTTAAGTGGG+TGG | - | chr7.4:1392295-1392314 | MS.gene22820:intron | 40.0% |
| ! | ATGAGCTATTTCAGGCACTA+AGG | + | chr7.4:1392396-1392415 | None:intergenic | 40.0% |
| ! | CATTGCTGTTGATATTTGGG+TGG | + | chr7.4:1391442-1391461 | None:intergenic | 40.0% |
| ! | CTACTGTTTCTTAAGTGGGT+GGG | - | chr7.4:1392296-1392315 | MS.gene22820:intron | 40.0% |
| ! | GACGTTTGAAGTCCAAAAAC+AGG | + | chr7.4:1390737-1390756 | None:intergenic | 40.0% |
| ! | GGGTGTTTGAAGCAGAAAAT+GGG | + | chr7.4:1389929-1389948 | None:intergenic | 40.0% |
| ! | GGTGTTTGAAGCAGAAAATG+GGG | + | chr7.4:1389928-1389947 | None:intergenic | 40.0% |
| ! | GTTTTATCCACTACCTTCAC+AGG | - | chr7.4:1391045-1391064 | MS.gene22820:intron | 40.0% |
| ! | TGAGCTATTTCAGGCACTAA+GGG | + | chr7.4:1392395-1392414 | None:intergenic | 40.0% |
| ! | TGGACTCAGAAGTATGCAAT+GGG | - | chr7.4:1392461-1392480 | MS.gene22820:CDS | 40.0% |
| ! | TTTTTCCAGCCAGGAAATAG+AGG | + | chr7.4:1391292-1391311 | None:intergenic | 40.0% |
| !!! | CTCACAATTTTTTTCCAGCC+AGG | + | chr7.4:1391301-1391320 | None:intergenic | 40.0% |
| AAAATTACCAGCGCTGCAAG+AGG | + | chr7.4:1389891-1389910 | None:intergenic | 45.0% | |
| AATACCTTGGGTGGCTTGAA+TGG | + | chr7.4:1391180-1391199 | None:intergenic | 45.0% | |
| ACAAAGTCCAATACCTTGGG+TGG | + | chr7.4:1391189-1391208 | None:intergenic | 45.0% | |
| ACTAAGGGATCATCTGGGTT+TGG | + | chr7.4:1392380-1392399 | None:intergenic | 45.0% | |
| AGAAAAACTCCTCCGGCATA+AGG | + | chr7.4:1391129-1391148 | None:intergenic | 45.0% | |
| AGGTTGGAGGATCTTTCTGA+AGG | + | chr7.4:1389871-1389890 | None:intergenic | 45.0% | |
| ATCCGTCAACAGGGAACAAA+TGG | + | chr7.4:1392357-1392376 | None:intergenic | 45.0% | |
| ATTCAAGCCACCCAAGGTAT+TGG | - | chr7.4:1391179-1391198 | MS.gene22820:CDS | 45.0% | |
| CCAAGTATGAAACCACTGCT+CGG | - | chr7.4:1392435-1392454 | MS.gene22820:CDS | 45.0% | |
| CCCCGCTTTGACAATATCTA+AGG | - | chr7.4:1391499-1391518 | MS.gene22820:intron | 45.0% | |
| GAAAAACTCCTCCGGCATAA+GGG | + | chr7.4:1391128-1391147 | None:intergenic | 45.0% | |
| GAAGCAGAAAATGGGGTTTG+AGG | + | chr7.4:1389921-1389940 | None:intergenic | 45.0% | |
| GAATGACACACTAAGGGGAA+CGG | + | chr7.4:1392225-1392244 | None:intergenic | 45.0% | |
| GGCTTGAATGGATAATCAGG+AGG | + | chr7.4:1391168-1391187 | None:intergenic | 45.0% | |
| GGTAGTGAGTCTGGTAACTT+TGG | - | chr7.4:1391645-1391664 | MS.gene22820:intron | 45.0% | |
| GGTGGCTTGAATGGATAATC+AGG | + | chr7.4:1391171-1391190 | None:intergenic | 45.0% | |
| GTCCAACTTCAGGATTGTGA+AGG | + | chr7.4:1391919-1391938 | None:intergenic | 45.0% | |
| GTTTCTTAAGTGGGTGGGAA+AGG | - | chr7.4:1392301-1392320 | MS.gene22820:intron | 45.0% | |
| TCCTAAATGCAACCTGCAAG+AGG | + | chr7.4:1391409-1391428 | None:intergenic | 45.0% | |
| TCCTCTTGCAGGTTGCATTT+AGG | - | chr7.4:1391405-1391424 | MS.gene22820:intron | 45.0% | |
| TGCAACCTGCAAGAGGAAAA+AGG | + | chr7.4:1391402-1391421 | None:intergenic | 45.0% | |
| TTATCCATTCAAGCCACCCA+AGG | - | chr7.4:1391173-1391192 | MS.gene22820:CDS | 45.0% | |
| ! | CTGGACTCAGAAGTATGCAA+TGG | - | chr7.4:1392460-1392479 | MS.gene22820:CDS | 45.0% |
| ! | GGGGTGTTTGAAGCAGAAAA+TGG | + | chr7.4:1389930-1389949 | None:intergenic | 45.0% |
| !!! | GTGTGTTTTGGTAGTGAGTC+TGG | - | chr7.4:1391636-1391655 | MS.gene22820:intron | 45.0% |
| !!! | ATTCAAATTAAATTTTAAAA+AGG | - | chr7.4:1392139-1392158 | MS.gene22820:intron | 5.0% |
| AACCTCCTCTATTTCCTGGC+TGG | - | chr7.4:1391284-1391303 | MS.gene22820:intron | 50.0% | |
| CAGGCACTAAGGGATCATCT+GGG | + | chr7.4:1392385-1392404 | None:intergenic | 50.0% | |
| CCGAGCAGTGGTTTCATACT+TGG | + | chr7.4:1392438-1392457 | None:intergenic | 50.0% | |
| CTTCAAACACCCCTCATGCT+TGG | - | chr7.4:1389937-1389956 | MS.gene22820:CDS | 50.0% | |
| GAAGGTCCTTGAGTTCCTTG+AGG | + | chr7.4:1389853-1389872 | None:intergenic | 50.0% | |
| GGGTGGGAAAGGTTTGTGTT+TGG | - | chr7.4:1392312-1392331 | MS.gene22820:intron | 50.0% | |
| TCAGGCACTAAGGGATCATC+TGG | + | chr7.4:1392386-1392405 | None:intergenic | 50.0% | |
| TGGGTTTGGATCCGTCAACA+GGG | + | chr7.4:1392366-1392385 | None:intergenic | 50.0% | |
| TTCCAGCCAGGAAATAGAGG+AGG | + | chr7.4:1391289-1391308 | None:intergenic | 50.0% | |
| ATGAAACCACTGCTCGGAGC+TGG | - | chr7.4:1392441-1392460 | MS.gene22820:CDS | 55.0% | |
| CTGGGTTTGGATCCGTCAAC+AGG | + | chr7.4:1392367-1392386 | None:intergenic | 55.0% | |
| GAGTTCCTTGAGGATCCGCT+TGG | + | chr7.4:1389843-1389862 | None:intergenic | 55.0% | |
| GCGGATCCTCAAGGAACTCA+AGG | - | chr7.4:1389844-1389863 | MS.gene22820:CDS | 55.0% | |
| TACAGGGCCTGTGAAGGTAG+TGG | + | chr7.4:1391055-1391074 | None:intergenic | 55.0% | |
| TCCTCCGGCATAAGGGCTAT+CGG | + | chr7.4:1391121-1391140 | None:intergenic | 55.0% | |
| TTACCAGCGCTGCAAGAGGT+TGG | + | chr7.4:1389887-1389906 | None:intergenic | 55.0% | |
| TTCCTTGAGGATCCGCTTGG+AGG | + | chr7.4:1389840-1389859 | None:intergenic | 55.0% | |
| TTCTGCTACAGGGCCTGTGA+AGG | + | chr7.4:1391061-1391080 | None:intergenic | 55.0% | |
| CCTCCGGCATAAGGGCTATC+GGG | + | chr7.4:1391120-1391139 | None:intergenic | 60.0% | |
| CTCCGGCATAAGGGCTATCG+GGG | + | chr7.4:1391119-1391138 | None:intergenic | 60.0% | |
| TCCGGCATAAGGGCTATCGG+GGG | + | chr7.4:1391118-1391137 | None:intergenic | 60.0% | |
| CCAGCGCTGCAAGAGGTTGG+AGG | + | chr7.4:1389884-1389903 | None:intergenic | 65.0% | |
| CCCCCCGATAGCCCTTATGC+CGG | - | chr7.4:1391114-1391133 | MS.gene22820:intron | 65.0% | |
| CCCGATAGCCCTTATGCCGG+AGG | - | chr7.4:1391117-1391136 | MS.gene22820:intron | 65.0% | |
| CCGGCATAAGGGCTATCGGG+GGG | + | chr7.4:1391117-1391136 | None:intergenic | 65.0% | |
| CCTCCAACCTCTTGCAGCGC+TGG | - | chr7.4:1389881-1389900 | MS.gene22820:CDS | 65.0% | |
| CTGAGTCCAGCTCCGAGCAG+TGG | + | chr7.4:1392450-1392469 | None:intergenic | 65.0% | |
| GGCCTCCAAGCGGATCCTCA+AGG | - | chr7.4:1389835-1389854 | MS.gene22820:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 1389833 | 1392487 | 1389833 | ID=MS.gene22820 |
| chr7.4 | mRNA | 1389833 | 1392487 | 1389833 | ID=MS.gene22820.t1;Parent=MS.gene22820 |
| chr7.4 | exon | 1392418 | 1392487 | 1392418 | ID=MS.gene22820.t1.exon1;Parent=MS.gene22820.t1 |
| chr7.4 | CDS | 1392418 | 1392487 | 1392418 | ID=cds.MS.gene22820.t1;Parent=MS.gene22820.t1 |
| chr7.4 | exon | 1391126 | 1391253 | 1391126 | ID=MS.gene22820.t1.exon2;Parent=MS.gene22820.t1 |
| chr7.4 | CDS | 1391126 | 1391253 | 1391126 | ID=cds.MS.gene22820.t1;Parent=MS.gene22820.t1 |
| chr7.4 | exon | 1390800 | 1390904 | 1390800 | ID=MS.gene22820.t1.exon3;Parent=MS.gene22820.t1 |
| chr7.4 | CDS | 1390800 | 1390904 | 1390800 | ID=cds.MS.gene22820.t1;Parent=MS.gene22820.t1 |
| chr7.4 | exon | 1389833 | 1389976 | 1389833 | ID=MS.gene22820.t1.exon4;Parent=MS.gene22820.t1 |
| chr7.4 | CDS | 1389833 | 1389976 | 1389833 | ID=cds.MS.gene22820.t1;Parent=MS.gene22820.t1 |
| Gene Sequence |
| Protein sequence |
