Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23261.t1 | RHN61288.1 | 98.6 | 486 | 7 | 0 | 1 | 486 | 132 | 617 | 4.70E-185 | 657.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23261.t1 | F4IHL3 | 74.5 | 479 | 121 | 1 | 1 | 478 | 138 | 616 | 4.1e-121 | 436.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23261.t1 | G7JG65 | 98.6 | 486 | 7 | 0 | 1 | 486 | 132 | 617 | 3.4e-185 | 657.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene23261.t1 | TR | mTERF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene23261 | 0.831947 | 1.25E-55 | -1.69E-46 |
| MS.gene049151 | MS.gene23261 | 0.819644 | 1.04E-52 | -1.69E-46 |
| MS.gene049153 | MS.gene23261 | 0.836526 | 8.89E-57 | -1.69E-46 |
| MS.gene049260 | MS.gene23261 | 0.837541 | 4.89E-57 | -1.69E-46 |
| MS.gene049297 | MS.gene23261 | 0.82282 | 1.93E-53 | -1.69E-46 |
| MS.gene049346 | MS.gene23261 | 0.840242 | 9.78E-58 | -1.69E-46 |
| MS.gene049351 | MS.gene23261 | 0.832509 | 9.08E-56 | -1.69E-46 |
| MS.gene049389 | MS.gene23261 | 0.805765 | 1.14E-49 | -1.69E-46 |
| MS.gene049491 | MS.gene23261 | 0.80672 | 7.17E-50 | -1.69E-46 |
| MS.gene049662 | MS.gene23261 | 0.80752 | 4.85E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene23261 | 0.887513 | 1.34E-72 | -1.69E-46 |
| MS.gene049910 | MS.gene23261 | 0.829633 | 4.62E-55 | -1.69E-46 |
| MS.gene049915 | MS.gene23261 | 0.812677 | 3.76E-51 | -1.69E-46 |
| MS.gene050099 | MS.gene23261 | 0.85669 | 2.71E-62 | -1.69E-46 |
| MS.gene050128 | MS.gene23261 | 0.816294 | 5.96E-52 | -1.69E-46 |
| MS.gene050227 | MS.gene23261 | 0.812707 | 3.70E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene23261 | 0.90438 | 1.30E-79 | -1.69E-46 |
| MS.gene050330 | MS.gene23261 | -0.836256 | 1.04E-56 | -1.69E-46 |
| MS.gene050397 | MS.gene23261 | 0.840218 | 9.92E-58 | -1.69E-46 |
| MS.gene050404 | MS.gene23261 | 0.806985 | 6.30E-50 | -1.69E-46 |
| MS.gene050406 | MS.gene23261 | 0.822953 | 1.80E-53 | -1.69E-46 |
| MS.gene050464 | MS.gene23261 | 0.832269 | 1.04E-55 | -1.69E-46 |
| MS.gene050529 | MS.gene23261 | 0.853491 | 2.31E-61 | -1.69E-46 |
| MS.gene050558 | MS.gene23261 | 0.848056 | 7.82E-60 | -1.69E-46 |
| MS.gene050642 | MS.gene23261 | 0.855937 | 4.51E-62 | -1.69E-46 |
| MS.gene050670 | MS.gene23261 | 0.812127 | 4.96E-51 | -1.69E-46 |
| MS.gene050812 | MS.gene23261 | 0.817373 | 3.41E-52 | -1.69E-46 |
| MS.gene05101 | MS.gene23261 | 0.849941 | 2.34E-60 | -1.69E-46 |
| MS.gene05119 | MS.gene23261 | -0.809693 | 1.67E-50 | -1.69E-46 |
| MS.gene051240 | MS.gene23261 | 0.824228 | 9.04E-54 | -1.69E-46 |
| MS.gene051242 | MS.gene23261 | 0.803675 | 3.11E-49 | -1.69E-46 |
| MS.gene051471 | MS.gene23261 | 0.848524 | 5.80E-60 | -1.69E-46 |
| MS.gene051525 | MS.gene23261 | 0.80355 | 3.30E-49 | -1.69E-46 |
| MS.gene051582 | MS.gene23261 | 0.836818 | 7.49E-57 | -1.69E-46 |
| MS.gene051662 | MS.gene23261 | 0.812684 | 3.75E-51 | -1.69E-46 |
| MS.gene051663 | MS.gene23261 | 0.843943 | 1.03E-58 | -1.69E-46 |
| MS.gene051860 | MS.gene23261 | 0.877179 | 7.73E-69 | -1.69E-46 |
| MS.gene051983 | MS.gene23261 | 0.852259 | 5.19E-61 | -1.69E-46 |
| MS.gene052011 | MS.gene23261 | -0.827928 | 1.19E-54 | -1.69E-46 |
| MS.gene052077 | MS.gene23261 | 0.830907 | 2.25E-55 | -1.69E-46 |
| MS.gene052078 | MS.gene23261 | 0.841967 | 3.45E-58 | -1.69E-46 |
| MS.gene052178 | MS.gene23261 | 0.862749 | 4.06E-64 | -1.69E-46 |
| MS.gene052188 | MS.gene23261 | 0.864791 | 9.43E-65 | -1.69E-46 |
| MS.gene052207 | MS.gene23261 | 0.831841 | 1.33E-55 | -1.69E-46 |
| MS.gene052253 | MS.gene23261 | 0.855457 | 6.23E-62 | -1.69E-46 |
| MS.gene052255 | MS.gene23261 | 0.808422 | 3.12E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene23261 | 0.85012 | 2.08E-60 | -1.69E-46 |
| MS.gene052326 | MS.gene23261 | 0.821393 | 4.13E-53 | -1.69E-46 |
| MS.gene052340 | MS.gene23261 | 0.878594 | 2.48E-69 | -1.69E-46 |
| MS.gene052485 | MS.gene23261 | 0.820374 | 7.10E-53 | -1.69E-46 |
| MS.gene052600 | MS.gene23261 | 0.839334 | 1.69E-57 | -1.69E-46 |
| MS.gene053209 | MS.gene23261 | 0.831641 | 1.49E-55 | -1.69E-46 |
| MS.gene053330 | MS.gene23261 | 0.804231 | 2.39E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene23261 | 0.866161 | 3.49E-65 | -1.69E-46 |
| MS.gene053836 | MS.gene23261 | 0.896894 | 2.38E-76 | -1.69E-46 |
| MS.gene053907 | MS.gene23261 | 0.832116 | 1.14E-55 | -1.69E-46 |
| MS.gene053928 | MS.gene23261 | 0.841876 | 3.64E-58 | -1.69E-46 |
| MS.gene053971 | MS.gene23261 | 0.827588 | 1.44E-54 | -1.69E-46 |
| MS.gene054010 | MS.gene23261 | 0.816352 | 5.78E-52 | -1.69E-46 |
| MS.gene054011 | MS.gene23261 | 0.825586 | 4.32E-54 | -1.69E-46 |
| MS.gene054012 | MS.gene23261 | 0.823288 | 1.50E-53 | -1.69E-46 |
| MS.gene054013 | MS.gene23261 | 0.816714 | 4.80E-52 | -1.69E-46 |
| MS.gene054123 | MS.gene23261 | 0.825878 | 3.69E-54 | -1.69E-46 |
| MS.gene054183 | MS.gene23261 | 0.824399 | 8.24E-54 | -1.69E-46 |
| MS.gene054214 | MS.gene23261 | 0.804593 | 2.01E-49 | -1.69E-46 |
| MS.gene054349 | MS.gene23261 | 0.827398 | 1.60E-54 | -1.69E-46 |
| MS.gene054473 | MS.gene23261 | 0.845949 | 2.95E-59 | -1.69E-46 |
| MS.gene054542 | MS.gene23261 | 0.811131 | 8.16E-51 | -1.69E-46 |
| MS.gene05455 | MS.gene23261 | 0.839194 | 1.83E-57 | -1.69E-46 |
| MS.gene054719 | MS.gene23261 | 0.803772 | 2.97E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene23261 | 0.837185 | 6.03E-57 | -1.69E-46 |
| MS.gene054942 | MS.gene23261 | 0.834432 | 3.01E-56 | -1.69E-46 |
| MS.gene054983 | MS.gene23261 | 0.851757 | 7.21E-61 | -1.69E-46 |
| MS.gene055116 | MS.gene23261 | 0.842062 | 3.25E-58 | -1.69E-46 |
| MS.gene055277 | MS.gene23261 | 0.859757 | 3.32E-63 | -1.69E-46 |
| MS.gene055390 | MS.gene23261 | 0.858274 | 9.22E-63 | -1.69E-46 |
| MS.gene055422 | MS.gene23261 | 0.869983 | 2.06E-66 | -1.69E-46 |
| MS.gene055428 | MS.gene23261 | 0.87644 | 1.39E-68 | -1.69E-46 |
| MS.gene05553 | MS.gene23261 | 0.85599 | 4.35E-62 | -1.69E-46 |
| MS.gene055604 | MS.gene23261 | 0.865992 | 3.95E-65 | -1.69E-46 |
| MS.gene055712 | MS.gene23261 | 0.817749 | 2.81E-52 | -1.69E-46 |
| MS.gene056191 | MS.gene23261 | 0.813178 | 2.92E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene23261 | 0.82822 | 1.01E-54 | -1.69E-46 |
| MS.gene056410 | MS.gene23261 | 0.819097 | 1.39E-52 | -1.69E-46 |
| MS.gene056451 | MS.gene23261 | 0.80683 | 6.80E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene23261 | 0.884441 | 1.91E-71 | -1.69E-46 |
| MS.gene056659 | MS.gene23261 | 0.817745 | 2.81E-52 | -1.69E-46 |
| MS.gene056723 | MS.gene23261 | 0.81887 | 1.56E-52 | -1.69E-46 |
| MS.gene056796 | MS.gene23261 | 0.830412 | 2.98E-55 | -1.69E-46 |
| MS.gene056875 | MS.gene23261 | 0.805819 | 1.11E-49 | -1.69E-46 |
| MS.gene056899 | MS.gene23261 | -0.803362 | 3.61E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene23261 | 0.840914 | 6.53E-58 | -1.69E-46 |
| MS.gene05702 | MS.gene23261 | 0.854562 | 1.13E-61 | -1.69E-46 |
| MS.gene057121 | MS.gene23261 | 0.889511 | 2.27E-73 | -1.69E-46 |
| MS.gene057245 | MS.gene23261 | 0.859593 | 3.71E-63 | -1.69E-46 |
| MS.gene05733 | MS.gene23261 | 0.833974 | 3.92E-56 | -1.69E-46 |
| MS.gene057396 | MS.gene23261 | 0.802669 | 5.03E-49 | -1.69E-46 |
| MS.gene057439 | MS.gene23261 | 0.820035 | 8.48E-53 | -1.69E-46 |
| MS.gene057448 | MS.gene23261 | 0.834473 | 2.94E-56 | -1.69E-46 |
| MS.gene057449 | MS.gene23261 | 0.8147 | 1.35E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene23261 | 0.840931 | 6.46E-58 | -1.69E-46 |
| MS.gene057469 | MS.gene23261 | 0.81297 | 3.24E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene23261 | 0.807125 | 5.89E-50 | -1.69E-46 |
| MS.gene057754 | MS.gene23261 | 0.803914 | 2.78E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene23261 | 0.894436 | 2.47E-75 | -1.69E-46 |
| MS.gene058082 | MS.gene23261 | 0.830795 | 2.40E-55 | -1.69E-46 |
| MS.gene05811 | MS.gene23261 | 0.90304 | 5.23E-79 | -1.69E-46 |
| MS.gene058139 | MS.gene23261 | 0.802051 | 6.74E-49 | -1.69E-46 |
| MS.gene058142 | MS.gene23261 | 0.898178 | 6.84E-77 | -1.69E-46 |
| MS.gene058233 | MS.gene23261 | 0.839121 | 1.91E-57 | -1.69E-46 |
| MS.gene058276 | MS.gene23261 | 0.844929 | 5.58E-59 | -1.69E-46 |
| MS.gene058365 | MS.gene23261 | 0.815167 | 1.06E-51 | -1.69E-46 |
| MS.gene05842 | MS.gene23261 | 0.80538 | 1.37E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene23261 | 0.839925 | 1.18E-57 | -1.69E-46 |
| MS.gene058710 | MS.gene23261 | 0.819066 | 1.41E-52 | -1.69E-46 |
| MS.gene058749 | MS.gene23261 | 0.85634 | 3.44E-62 | -1.69E-46 |
| MS.gene058787 | MS.gene23261 | 0.806899 | 6.57E-50 | -1.69E-46 |
| MS.gene058833 | MS.gene23261 | 0.840425 | 8.76E-58 | -1.69E-46 |
| MS.gene058845 | MS.gene23261 | 0.85873 | 6.74E-63 | -1.69E-46 |
| MS.gene05886 | MS.gene23261 | 0.829858 | 4.07E-55 | -1.69E-46 |
| MS.gene058928 | MS.gene23261 | 0.80422 | 2.40E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene23261 | 0.881296 | 2.70E-70 | -1.69E-46 |
| MS.gene059247 | MS.gene23261 | 0.807524 | 4.85E-50 | -1.69E-46 |
| MS.gene059285 | MS.gene23261 | 0.815278 | 1.00E-51 | -1.69E-46 |
| MS.gene059294 | MS.gene23261 | 0.822661 | 2.10E-53 | -1.69E-46 |
| MS.gene059420 | MS.gene23261 | 0.831193 | 1.92E-55 | -1.69E-46 |
| MS.gene059518 | MS.gene23261 | 0.868435 | 6.54E-66 | -1.69E-46 |
| MS.gene059597 | MS.gene23261 | 0.847542 | 1.08E-59 | -1.69E-46 |
| MS.gene059676 | MS.gene23261 | 0.828606 | 8.19E-55 | -1.69E-46 |
| MS.gene059688 | MS.gene23261 | 0.843062 | 1.77E-58 | -1.69E-46 |
| MS.gene059692 | MS.gene23261 | 0.849243 | 3.66E-60 | -1.69E-46 |
| MS.gene059695 | MS.gene23261 | 0.848015 | 8.02E-60 | -1.69E-46 |
| MS.gene059708 | MS.gene23261 | 0.802303 | 5.98E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene23261 | 0.885404 | 8.37E-72 | -1.69E-46 |
| MS.gene059894 | MS.gene23261 | 0.893491 | 5.99E-75 | -1.69E-46 |
| MS.gene059899 | MS.gene23261 | 0.842304 | 2.81E-58 | -1.69E-46 |
| MS.gene06037 | MS.gene23261 | 0.851377 | 9.23E-61 | -1.69E-46 |
| MS.gene060407 | MS.gene23261 | 0.866266 | 3.23E-65 | -1.69E-46 |
| MS.gene060476 | MS.gene23261 | 0.827754 | 1.31E-54 | -1.69E-46 |
| MS.gene06090 | MS.gene23261 | 0.807975 | 3.89E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene23261 | 0.892658 | 1.30E-74 | -1.69E-46 |
| MS.gene061154 | MS.gene23261 | 0.806944 | 6.43E-50 | -1.69E-46 |
| MS.gene061159 | MS.gene23261 | 0.812261 | 4.63E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23261.t1 | MTR_4g070060 | 98.148 | 486 | 9 | 0 | 1 | 486 | 132 | 617 | 0.0 | 983 |
| MS.gene23261.t1 | MTR_5g068860 | 28.169 | 355 | 247 | 4 | 104 | 456 | 136 | 484 | 1.26e-37 | 145 |
| MS.gene23261.t1 | MTR_1g115415 | 25.424 | 354 | 254 | 4 | 104 | 454 | 104 | 450 | 1.65e-34 | 135 |
| MS.gene23261.t1 | MTR_6g003960 | 28.037 | 321 | 227 | 4 | 135 | 454 | 270 | 587 | 3.36e-32 | 130 |
| MS.gene23261.t1 | MTR_4g084630 | 26.032 | 315 | 193 | 6 | 144 | 455 | 42 | 319 | 1.96e-31 | 124 |
| MS.gene23261.t1 | MTR_2g034600 | 27.402 | 281 | 167 | 5 | 218 | 464 | 215 | 492 | 1.65e-24 | 106 |
| MS.gene23261.t1 | MTR_2g034600 | 24.153 | 236 | 167 | 5 | 140 | 373 | 244 | 469 | 4.80e-17 | 84.0 |
| MS.gene23261.t1 | MTR_2g034600 | 27.402 | 281 | 167 | 5 | 218 | 464 | 280 | 557 | 2.10e-24 | 106 |
| MS.gene23261.t1 | MTR_2g034600 | 25.389 | 193 | 139 | 3 | 140 | 331 | 309 | 497 | 5.43e-17 | 84.0 |
| MS.gene23261.t1 | MTR_2g034600 | 27.402 | 281 | 167 | 5 | 218 | 464 | 276 | 553 | 2.53e-24 | 106 |
| MS.gene23261.t1 | MTR_2g034600 | 25.389 | 193 | 139 | 3 | 140 | 331 | 305 | 493 | 6.72e-17 | 84.0 |
| MS.gene23261.t1 | MTR_2g067230 | 29.231 | 260 | 170 | 7 | 216 | 473 | 71 | 318 | 6.93e-24 | 102 |
| MS.gene23261.t1 | MTR_2g049780 | 28.448 | 232 | 160 | 5 | 230 | 459 | 82 | 309 | 2.51e-20 | 92.0 |
| MS.gene23261.t1 | MTR_5g094610 | 25.965 | 285 | 155 | 7 | 218 | 454 | 195 | 471 | 6.90e-19 | 89.7 |
| MS.gene23261.t1 | MTR_5g094610 | 25.764 | 229 | 164 | 5 | 106 | 331 | 225 | 450 | 8.67e-12 | 67.8 |
| MS.gene23261.t1 | MTR_5g041630 | 28.696 | 230 | 156 | 5 | 226 | 451 | 64 | 289 | 3.30e-17 | 82.8 |
| MS.gene23261.t1 | MTR_8g105560 | 22.177 | 248 | 188 | 2 | 167 | 412 | 111 | 355 | 2.00e-16 | 82.4 |
| MS.gene23261.t1 | MTR_7g081270 | 27.670 | 206 | 142 | 5 | 253 | 454 | 77 | 279 | 6.56e-15 | 75.5 |
| MS.gene23261.t1 | MTR_3g092710 | 21.728 | 405 | 249 | 14 | 79 | 433 | 83 | 469 | 2.54e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23261.t1 | AT2G21710 | 64.718 | 479 | 168 | 1 | 1 | 478 | 138 | 616 | 0.0 | 674 |
| MS.gene23261.t1 | AT2G21710 | 66.348 | 419 | 140 | 1 | 1 | 418 | 138 | 556 | 0.0 | 603 |
| MS.gene23261.t1 | AT2G21710 | 66.507 | 418 | 139 | 1 | 1 | 417 | 138 | 555 | 0.0 | 602 |
| MS.gene23261.t1 | AT4G02990 | 28.125 | 352 | 245 | 4 | 107 | 456 | 147 | 492 | 2.68e-36 | 141 |
| MS.gene23261.t1 | AT4G02990 | 28.125 | 352 | 245 | 4 | 107 | 456 | 147 | 492 | 2.68e-36 | 141 |
| MS.gene23261.t1 | AT2G44020 | 24.737 | 380 | 266 | 5 | 104 | 480 | 109 | 471 | 3.29e-34 | 135 |
| MS.gene23261.t1 | AT1G78930 | 29.577 | 355 | 240 | 7 | 103 | 454 | 227 | 574 | 3.37e-34 | 135 |
| MS.gene23261.t1 | AT1G78930 | 23.774 | 265 | 196 | 3 | 72 | 331 | 260 | 523 | 3.04e-15 | 79.0 |
| MS.gene23261.t1 | AT4G38160 | 26.488 | 336 | 203 | 8 | 126 | 455 | 24 | 321 | 3.38e-32 | 126 |
| MS.gene23261.t1 | AT4G38160 | 26.488 | 336 | 203 | 8 | 126 | 455 | 24 | 321 | 3.38e-32 | 126 |
| MS.gene23261.t1 | AT4G38160 | 26.488 | 336 | 203 | 8 | 126 | 455 | 24 | 321 | 8.26e-32 | 125 |
| MS.gene23261.t1 | AT4G38160 | 26.488 | 336 | 203 | 8 | 126 | 455 | 24 | 321 | 1.20e-31 | 125 |
| MS.gene23261.t1 | AT4G14605 | 24.206 | 252 | 183 | 5 | 205 | 454 | 222 | 467 | 6.69e-22 | 99.0 |
| MS.gene23261.t1 | AT4G14605 | 25.824 | 182 | 128 | 2 | 143 | 324 | 268 | 442 | 4.03e-14 | 75.1 |
| MS.gene23261.t1 | AT4G14605 | 24.206 | 252 | 183 | 5 | 205 | 454 | 222 | 467 | 6.69e-22 | 99.0 |
| MS.gene23261.t1 | AT4G14605 | 25.824 | 182 | 128 | 2 | 143 | 324 | 268 | 442 | 4.03e-14 | 75.1 |
| MS.gene23261.t1 | AT5G55580 | 27.863 | 262 | 140 | 7 | 218 | 436 | 82 | 337 | 6.06e-21 | 95.1 |
| MS.gene23261.t1 | AT5G55580 | 25.177 | 282 | 201 | 5 | 67 | 341 | 69 | 347 | 1.69e-12 | 69.3 |
| MS.gene23261.t1 | AT5G55580 | 27.863 | 262 | 140 | 7 | 218 | 436 | 188 | 443 | 1.22e-20 | 95.1 |
| MS.gene23261.t1 | AT5G55580 | 25.177 | 282 | 201 | 5 | 67 | 341 | 175 | 453 | 2.72e-12 | 69.3 |
| MS.gene23261.t1 | AT2G34620 | 27.600 | 250 | 172 | 6 | 213 | 460 | 54 | 296 | 1.38e-20 | 92.4 |
| MS.gene23261.t1 | AT2G36000 | 28.800 | 250 | 158 | 9 | 217 | 459 | 76 | 312 | 6.66e-19 | 87.8 |
| MS.gene23261.t1 | AT2G36000 | 28.800 | 250 | 158 | 9 | 217 | 459 | 76 | 312 | 7.06e-19 | 88.2 |
| MS.gene23261.t1 | AT2G03050 | 27.984 | 243 | 165 | 6 | 217 | 456 | 35 | 270 | 5.18e-18 | 84.7 |
| MS.gene23261.t1 | AT2G03050 | 27.984 | 243 | 165 | 6 | 217 | 456 | 36 | 271 | 5.47e-18 | 84.7 |
| MS.gene23261.t1 | AT5G54180 | 24.848 | 330 | 194 | 11 | 138 | 461 | 214 | 495 | 7.16e-17 | 83.6 |
| MS.gene23261.t1 | AT5G55580 | 29.688 | 192 | 122 | 7 | 218 | 402 | 188 | 373 | 2.78e-15 | 78.2 |
| MS.gene23261.t1 | AT5G55580 | 23.077 | 208 | 157 | 3 | 140 | 345 | 181 | 387 | 9.89e-13 | 70.1 |
| MS.gene23261.t1 | AT5G55580 | 23.295 | 176 | 128 | 4 | 145 | 315 | 221 | 394 | 6.48e-12 | 67.8 |
| MS.gene23261.t1 | AT3G46950 | 25.000 | 368 | 227 | 11 | 144 | 473 | 85 | 441 | 4.75e-15 | 77.8 |
| MS.gene23261.t1 | AT3G18870 | 26.471 | 204 | 143 | 6 | 254 | 454 | 69 | 268 | 3.33e-14 | 73.2 |
| MS.gene23261.t1 | AT1G79220 | 23.438 | 256 | 187 | 5 | 189 | 444 | 91 | 337 | 1.48e-13 | 72.8 |
| MS.gene23261.t1 | AT1G62110 | 24.340 | 341 | 219 | 12 | 135 | 454 | 112 | 434 | 4.63e-11 | 65.5 |
| MS.gene23261.t1 | AT1G62085 | 23.077 | 338 | 224 | 11 | 136 | 454 | 114 | 434 | 8.72e-11 | 64.3 |
| MS.gene23261.t1 | AT1G62085 | 23.077 | 338 | 224 | 11 | 136 | 454 | 114 | 434 | 8.72e-11 | 64.3 |
Find 106 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGATTACTTGAAAGAATT+TGG | 0.111467 | 4.2:+36809295 | MS.gene23261:CDS |
| GTTAAGTATCTGTACTATTA+TGG | 0.143456 | 4.2:+36809403 | MS.gene23261:CDS |
| TGACAGTAGATTGAAGTTTA+TGG | 0.164656 | 4.2:-36810496 | None:intergenic |
| GTTGATTATTTAGAGTTTAA+TGG | 0.191787 | 4.2:+36808955 | MS.gene23261:CDS |
| GGTTTAGATGCGAAGGATTT+TGG | 0.193478 | 4.2:+36809081 | MS.gene23261:CDS |
| AATTACTTATACTGGTAATT+TGG | 0.209026 | 4.2:+36807898 | MS.gene23261:CDS |
| TGTGCAGTTCTATCTGGATA+TGG | 0.253475 | 4.2:+36809059 | MS.gene23261:CDS |
| CGGCATACGTCTTCGGCAAC+TGG | 0.256271 | 4.2:+36810094 | MS.gene23261:CDS |
| GCAATGCGGAAGGGTAAATT+TGG | 0.282919 | 4.2:+36807875 | MS.gene23261:CDS |
| CTCAAGTTGTGCCACTTATC+AGG | 0.283792 | 4.2:+36808038 | MS.gene23261:CDS |
| TCGTTAAGGGAGAGTTTATT+GGG | 0.287908 | 4.2:+36808869 | MS.gene23261:CDS |
| TTAAGTATCTGTACTATTAT+GGG | 0.290110 | 4.2:+36809404 | MS.gene23261:CDS |
| TTACGTCTGGGCTGTAGATT+GGG | 0.307230 | 4.2:-36810540 | None:intergenic |
| TTTACGTCTGGGCTGTAGAT+TGG | 0.307874 | 4.2:-36810541 | None:intergenic |
| AAATTTGGAATTACTTATAC+TGG | 0.310485 | 4.2:+36807890 | MS.gene23261:CDS |
| GGTAATTTGGTTGATAGGTT+GGG | 0.326740 | 4.2:+36807911 | MS.gene23261:CDS |
| TGAAGAAGAGGGAATGATTA+TGG | 0.327848 | 4.2:+36807805 | None:intergenic |
| ATACTGGTAATTTGGTTGAT+AGG | 0.329853 | 4.2:+36807906 | MS.gene23261:CDS |
| AAAGTCGAATTTGAATATTC+CGG | 0.331125 | 4.2:-36807983 | None:intergenic |
| GTATAGTGACCGAGAGCTTT+AGG | 0.334085 | 4.2:-36809123 | None:intergenic |
| ATTTAGAGTTTAATGGAGTC+AGG | 0.343191 | 4.2:+36808962 | MS.gene23261:CDS |
| GGTTCGTGTGCAGTTCTATC+TGG | 0.345234 | 4.2:+36809053 | MS.gene23261:CDS |
| TTGATTACTTGAAAGAATTT+GGG | 0.348366 | 4.2:+36809296 | MS.gene23261:CDS |
| AGAATTTGGGCTTGAAAGTA+AGG | 0.349816 | 4.2:+36809309 | MS.gene23261:CDS |
| TTCGTTAAGGGAGAGTTTAT+TGG | 0.350638 | 4.2:+36808868 | MS.gene23261:CDS |
| TGTCTCTCGGCATACGTCTT+CGG | 0.352299 | 4.2:+36810087 | MS.gene23261:CDS |
| TGCTAATTTGAAAAGATTGC+CGG | 0.361400 | 4.2:+36807964 | MS.gene23261:CDS |
| ATTCCAAAGGTTATAGCTCT+TGG | 0.363130 | 4.2:+36810005 | MS.gene23261:CDS |
| GAGGGAAACTTGAGTCTATA+AGG | 0.365728 | 4.2:+36808818 | MS.gene23261:CDS |
| AGCTCTTGGACCTGAGCTCT+TGG | 0.369738 | 4.2:+36810019 | MS.gene23261:CDS |
| TGCATTTCGGCCACAATTGA+TGG | 0.381846 | 4.2:+36809348 | MS.gene23261:CDS |
| GGTCCAAGAGCTATAACCTT+TGG | 0.387818 | 4.2:-36810008 | None:intergenic |
| GTTGAAGTCGGTGTTCGTTA+AGG | 0.394030 | 4.2:+36808855 | MS.gene23261:CDS |
| ATAGCCTTTACAAGAAGATT+AGG | 0.395908 | 4.2:+36809777 | MS.gene23261:CDS |
| TATTCCAAGACACAAGGTTC+TGG | 0.399312 | 4.2:+36810382 | MS.gene23261:CDS |
| TTCTTCAGTGACTCCAGCCT+TGG | 0.412260 | 4.2:-36809979 | None:intergenic |
| TTGAAGTCGGTGTTCGTTAA+GGG | 0.416290 | 4.2:+36808856 | MS.gene23261:CDS |
| GTGCAGTTCTATCTGGATAT+GGG | 0.421836 | 4.2:+36809060 | MS.gene23261:CDS |
| TTGGTAAGTTGCTTGCATTT+CGG | 0.429654 | 4.2:+36809335 | MS.gene23261:CDS |
| TCCACCAGAACCTTGTGTCT+TGG | 0.429802 | 4.2:-36810386 | None:intergenic |
| TGGAGTCAGGAGGGAATGGA+TGG | 0.438671 | 4.2:+36808975 | MS.gene23261:CDS |
| GCTCTTGGACCTGAGCTCTT+GGG | 0.443260 | 4.2:+36810020 | MS.gene23261:CDS |
| TTGCGCAAATAAGTATACTT+AGG | 0.455182 | 4.2:-36810173 | None:intergenic |
| TGGTAATTTGGTTGATAGGT+TGG | 0.459689 | 4.2:+36807910 | MS.gene23261:CDS |
| GTAAAGTATTATTTGTCTCT+CGG | 0.471517 | 4.2:+36810074 | MS.gene23261:CDS |
| CAATGACATCGTGCAAAGTT+CGG | 0.479808 | 4.2:-36810205 | None:intergenic |
| AGCTCTCGGTCACTATACTT+TGG | 0.485000 | 4.2:+36809128 | MS.gene23261:CDS |
| TTAATGGAGTCAGGAGGGAA+TGG | 0.490995 | 4.2:+36808971 | MS.gene23261:CDS |
| AGGCTATAAGTGAGTAGAGT+GGG | 0.491093 | 4.2:-36809761 | None:intergenic |
| TATTGTATCTGAGCAGCATT+GGG | 0.494643 | 4.2:-36810136 | None:intergenic |
| GGGCTTGAAAGTAAGGATGT+TGG | 0.497791 | 4.2:+36809316 | MS.gene23261:CDS |
| AGAGTTTAATGGAGTCAGGA+GGG | 0.498246 | 4.2:+36808966 | MS.gene23261:CDS |
| GACCTAGGGGTTCGAAATGA+CGG | 0.512080 | 4.2:+36809713 | MS.gene23261:CDS |
| GAAGTTGTTATCTTACAGCT+TGG | 0.512987 | 4.2:+36809020 | MS.gene23261:CDS |
| GCTGCGGAGTGACGGGGAGT+TGG | 0.513594 | 4.2:+36808924 | MS.gene23261:CDS |
| TCAATCTACTGTCATGAAAG+AGG | 0.513691 | 4.2:+36810505 | MS.gene23261:CDS |
| TAACCATAATACCTGATAAG+TGG | 0.519346 | 4.2:-36808049 | None:intergenic |
| CATTCTCCTCATCCCATCTC+GGG | 0.520803 | 4.2:-36809431 | None:intergenic |
| GCATTCTCCTCATCCCATCT+CGG | 0.523104 | 4.2:-36809432 | None:intergenic |
| ACGATGTCATTGAGTTTCCC+AGG | 0.527231 | 4.2:+36810216 | MS.gene23261:CDS |
| AGCATAGTACATAAGCTTGA+AGG | 0.532239 | 4.2:+36810047 | MS.gene23261:CDS |
| ATATTCTTGATGACCAAGGC+TGG | 0.532993 | 4.2:+36809966 | MS.gene23261:CDS |
| GGATTACCCGAGATGGGATG+AGG | 0.534187 | 4.2:+36809425 | MS.gene23261:CDS |
| CAGGCCTAATCTTCTTGTAA+AGG | 0.535894 | 4.2:-36809781 | None:intergenic |
| AATTTGGTTGATAGGTTGGG+TGG | 0.539654 | 4.2:+36807914 | MS.gene23261:CDS |
| ATGCTGCATCCCAAGAGCTC+AGG | 0.539681 | 4.2:-36810029 | None:intergenic |
| ACCTAGGGGTTCGAAATGAC+GGG | 0.539793 | 4.2:+36809714 | MS.gene23261:CDS |
| TATTATGGGATTACCCGAGA+TGG | 0.548665 | 4.2:+36809418 | MS.gene23261:CDS |
| TCGTAGGAAGGTTACTGAAG+AGG | 0.548898 | 4.2:+36807841 | MS.gene23261:CDS |
| GGCATACGTCTTCGGCAACT+GGG | 0.551380 | 4.2:+36810095 | MS.gene23261:CDS |
| ATATTGTATCTGAGCAGCAT+TGG | 0.552053 | 4.2:-36810137 | None:intergenic |
| AGCTATTGAGATTCGTAGGA+AGG | 0.552352 | 4.2:+36807829 | MS.gene23261:CDS |
| ATGCTGCACGCCATCAATTG+TGG | 0.553984 | 4.2:-36809358 | None:intergenic |
| TCCAAGACACAAGGTTCTGG+TGG | 0.555314 | 4.2:+36810385 | MS.gene23261:CDS |
| CGTTAAGGGAGAGTTTATTG+GGG | 0.561027 | 4.2:+36808870 | MS.gene23261:CDS |
| TAGAGTTTAATGGAGTCAGG+AGG | 0.565616 | 4.2:+36808965 | MS.gene23261:CDS |
| ATTATGGGATTACCCGAGAT+GGG | 0.565768 | 4.2:+36809419 | MS.gene23261:CDS |
| GGATATGGGTTTAGATGCGA+AGG | 0.566566 | 4.2:+36809074 | MS.gene23261:CDS |
| TGGAAGCTATTGAGATTCGT+AGG | 0.571096 | 4.2:+36807825 | MS.gene23261:CDS |
| TACTTATTTGCGCAAAACCA+TGG | 0.571905 | 4.2:+36810181 | MS.gene23261:CDS |
| AAGGCTATAAGTGAGTAGAG+TGG | 0.574897 | 4.2:-36809762 | None:intergenic |
| TTACAGCTTGGAAGAAGTGA+AGG | 0.575349 | 4.2:+36809032 | MS.gene23261:CDS |
| TACGTCTGGGCTGTAGATTG+GGG | 0.575774 | 4.2:-36810539 | None:intergenic |
| AATGCTTACAATTAAACCAA+TGG | 0.584764 | 4.2:+36809450 | MS.gene23261:CDS |
| TAGTACAGATACTTAACAAG+AGG | 0.586183 | 4.2:-36809397 | None:intergenic |
| AAGTCAACACAAAAGACCAT+TGG | 0.586719 | 4.2:-36809466 | None:intergenic |
| GGAGATGACTATTGTGCCAA+AGG | 0.586961 | 4.2:+36809489 | MS.gene23261:CDS |
| TGGAATAATTCGACCCTCGA+GGG | 0.595008 | 4.2:-36810366 | None:intergenic |
| TTACAAGAAGATTAGGCCTG+TGG | 0.602463 | 4.2:+36809784 | MS.gene23261:CDS |
| GGATGGGTTATGTTGTGAGT+CGG | 0.603970 | 4.2:+36808992 | MS.gene23261:CDS |
| CGTGCAGCATTGAAGAACAA+TGG | 0.604478 | 4.2:+36809371 | MS.gene23261:CDS |
| GGAGTCAGGAGGGAATGGAT+GGG | 0.605621 | 4.2:+36808976 | MS.gene23261:CDS |
| CACTGAAGAAAATATTCCAA+AGG | 0.608783 | 4.2:+36809992 | MS.gene23261:CDS |
| ATCGTGCAAAGTTCGGACCA+TGG | 0.622950 | 4.2:-36810198 | None:intergenic |
| TTTAAAGAAGCAATGCGGAA+GGG | 0.624488 | 4.2:+36807866 | MS.gene23261:CDS |
| AAAATGAGCTTAGCTATCTG+AGG | 0.626607 | 4.2:-36808787 | None:intergenic |
| AAGCTGTAAGATAACAACTT+CGG | 0.628272 | 4.2:-36809018 | None:intergenic |
| CCGTGTTGAGTGGTTGAAGT+CGG | 0.637384 | 4.2:+36808843 | MS.gene23261:CDS |
| CTATAAGGAACCGTGTTGAG+TGG | 0.637525 | 4.2:+36808833 | MS.gene23261:CDS |
| TCGAATTATTCCAAGACACA+AGG | 0.638216 | 4.2:+36810376 | MS.gene23261:CDS |
| CCGACTTCAACCACTCAACA+CGG | 0.641986 | 4.2:-36808843 | None:intergenic |
| TTGGAATAATTCGACCCTCG+AGG | 0.648302 | 4.2:-36810367 | None:intergenic |
| TTTGGAAGAAATGAGCCGAA+AGG | 0.661203 | 4.2:+36809146 | MS.gene23261:CDS |
| GGTCATATTCTTGATGACCA+AGG | 0.669719 | 4.2:+36809962 | MS.gene23261:intron |
| AGATGAAGAATTTAACAACA+TGG | 0.681193 | 4.2:+36810451 | MS.gene23261:CDS |
| TCCCGTCATTTCGAACCCCT+AGG | 0.681388 | 4.2:-36809715 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAATTTACATACCTT+TGG | - | chr4.2:36809508-36809527 | None:intergenic | 15.0% |
| !! | TTCATAAATAAAATTTCCAA+TGG | + | chr4.2:36809614-36809633 | MS.gene23261:intron | 15.0% |
| !!! | AAATTCGACTTTTAATTTAA+GGG | + | chr4.2:36807994-36808013 | MS.gene23261:CDS | 15.0% |
| !!! | AATTTTTGACAAACTTTATA+GGG | + | chr4.2:36809175-36809194 | MS.gene23261:intron | 15.0% |
| !!! | TAATTTTTGACAAACTTTAT+AGG | + | chr4.2:36809174-36809193 | MS.gene23261:intron | 15.0% |
| !!! | TTTTAAAAATTGTGTATCTA+TGG | - | chr4.2:36810259-36810278 | None:intergenic | 15.0% |
| !! | AATTACTTATACTGGTAATT+TGG | + | chr4.2:36807898-36807917 | MS.gene23261:CDS | 20.0% |
| !! | TCAAAAATTAATGTACCTTT+CGG | - | chr4.2:36809164-36809183 | None:intergenic | 20.0% |
| !! | TTAAGTATCTGTACTATTAT+GGG | + | chr4.2:36809404-36809423 | MS.gene23261:CDS | 20.0% |
| !! | TTGATTACTTGAAAGAATTT+GGG | + | chr4.2:36809296-36809315 | MS.gene23261:CDS | 20.0% |
| !!! | AAATTTGGAATTACTTATAC+TGG | + | chr4.2:36807890-36807909 | MS.gene23261:CDS | 20.0% |
| !!! | ATTTAAAGTTGAATATGCAA+TGG | - | chr4.2:36810308-36810327 | None:intergenic | 20.0% |
| !!! | CAAATTCGACTTTTAATTTA+AGG | + | chr4.2:36807993-36808012 | MS.gene23261:CDS | 20.0% |
| !!! | GTTGATTATTTAGAGTTTAA+TGG | + | chr4.2:36808955-36808974 | MS.gene23261:CDS | 20.0% |
| !!! | TGTTACATATTTTATCATGA+AGG | + | chr4.2:36809676-36809695 | MS.gene23261:intron | 20.0% |
| ! | AAAGTCGAATTTGAATATTC+CGG | - | chr4.2:36807986-36808005 | None:intergenic | 25.0% |
| ! | AATGCTTACAATTAAACCAA+TGG | + | chr4.2:36809450-36809469 | MS.gene23261:CDS | 25.0% |
| ! | AGAATTATTTGAATGTAACC+AGG | + | chr4.2:36808168-36808187 | MS.gene23261:intron | 25.0% |
| ! | AGATGAAGAATTTAACAACA+TGG | + | chr4.2:36810451-36810470 | MS.gene23261:CDS | 25.0% |
| ! | ATGCAACAATTGTAAATTTC+AGG | + | chr4.2:36809273-36809292 | MS.gene23261:intron | 25.0% |
| ! | CAAAATATGCACTGAAAATT+TGG | - | chr4.2:36808421-36808440 | None:intergenic | 25.0% |
| ! | GCTTCAGAAAAATTACTTAA+TGG | - | chr4.2:36809845-36809864 | None:intergenic | 25.0% |
| ! | GTTAAGTATCTGTACTATTA+TGG | + | chr4.2:36809403-36809422 | MS.gene23261:CDS | 25.0% |
| ! | GTTGATTACTTGAAAGAATT+TGG | + | chr4.2:36809295-36809314 | MS.gene23261:CDS | 25.0% |
| ! | TCTAAATATCATTGATACCT+GGG | - | chr4.2:36810236-36810255 | None:intergenic | 25.0% |
| ! | TTATGAATTGAGATTAGTGT+TGG | + | chr4.2:36808069-36808088 | MS.gene23261:intron | 25.0% |
| ! | TTTAGGAAAATCAAAAACCA+TGG | - | chr4.2:36809109-36809128 | None:intergenic | 25.0% |
| !! | AATGGTAACAAATTTTGTAG+CGG | - | chr4.2:36809827-36809846 | None:intergenic | 25.0% |
| !! | ATTGTCAGTATTTTATCATC+AGG | - | chr4.2:36809654-36809673 | None:intergenic | 25.0% |
| !! | GTAAAGTATTATTTGTCTCT+CGG | + | chr4.2:36810074-36810093 | MS.gene23261:CDS | 25.0% |
| AAAGAAAAAAGACATACCAC+AGG | - | chr4.2:36809803-36809822 | None:intergenic | 30.0% | |
| AAGCTGTAAGATAACAACTT+CGG | - | chr4.2:36809021-36809040 | None:intergenic | 30.0% | |
| AATCAGAGTGATAAACTTTG+TGG | - | chr4.2:36809875-36809894 | None:intergenic | 30.0% | |
| ACATCTTTGATTAGAGTTGT+CGG | + | chr4.2:36808215-36808234 | MS.gene23261:intron | 30.0% | |
| ATACTGGTAATTTGGTTGAT+AGG | + | chr4.2:36807906-36807925 | MS.gene23261:CDS | 30.0% | |
| ATAGCCTTTACAAGAAGATT+AGG | + | chr4.2:36809777-36809796 | MS.gene23261:CDS | 30.0% | |
| CACTGAAGAAAATATTCCAA+AGG | + | chr4.2:36809992-36810011 | MS.gene23261:CDS | 30.0% | |
| CATTTCTTCAATTCTCTAGA+TGG | + | chr4.2:36808740-36808759 | MS.gene23261:intron | 30.0% | |
| GTCTAAATATCATTGATACC+TGG | - | chr4.2:36810237-36810256 | None:intergenic | 30.0% | |
| TAACCATAATACCTGATAAG+TGG | - | chr4.2:36808052-36808071 | None:intergenic | 30.0% | |
| TAGTACAGATACTTAACAAG+AGG | - | chr4.2:36809400-36809419 | None:intergenic | 30.0% | |
| TGACAGTAGATTGAAGTTTA+TGG | - | chr4.2:36810499-36810518 | None:intergenic | 30.0% | |
| TGCTAATTTGAAAAGATTGC+CGG | + | chr4.2:36807964-36807983 | MS.gene23261:CDS | 30.0% | |
| TTATAAACTGTCTGATCAAG+AGG | + | chr4.2:36809899-36809918 | MS.gene23261:intron | 30.0% | |
| TTGCGCAAATAAGTATACTT+AGG | - | chr4.2:36810176-36810195 | None:intergenic | 30.0% | |
| ! | ATTTAGAGTTTAATGGAGTC+AGG | + | chr4.2:36808962-36808981 | MS.gene23261:CDS | 30.0% |
| !! | AGGTTTTTAAAGAAGCAATG+CGG | + | chr4.2:36807861-36807880 | MS.gene23261:CDS | 30.0% |
| !! | TGAGTTTGCTTGTTGTATAT+AGG | + | chr4.2:36809941-36809960 | MS.gene23261:intron | 30.0% |
| !! | TTGATTTGCGTATTGTTGTT+AGG | + | chr4.2:36808688-36808707 | MS.gene23261:intron | 30.0% |
| !! | TTTGATTTTCCTAAAGCTCT+CGG | + | chr4.2:36809114-36809133 | MS.gene23261:CDS | 30.0% |
| !!! | CATGAAGGTAAAGTTTTTTC+AGG | + | chr4.2:36809691-36809710 | MS.gene23261:intron | 30.0% |
| !!! | TAAAGTTTTTTCAGGACCTA+GGG | + | chr4.2:36809699-36809718 | MS.gene23261:CDS | 30.0% |
| AAAATGAGCTTAGCTATCTG+AGG | - | chr4.2:36808790-36808809 | None:intergenic | 35.0% | |
| AAGTATGAGAGAAGACAACA+AGG | - | chr4.2:36809223-36809242 | None:intergenic | 35.0% | |
| AAGTCAACACAAAAGACCAT+TGG | - | chr4.2:36809469-36809488 | None:intergenic | 35.0% | |
| ACACAACACAACAAGTAAGT+TGG | - | chr4.2:36808311-36808330 | None:intergenic | 35.0% | |
| ACTCTAATCAAAGATGTGTC+TGG | - | chr4.2:36808212-36808231 | None:intergenic | 35.0% | |
| AGAATTTGGGCTTGAAAGTA+AGG | + | chr4.2:36809309-36809328 | MS.gene23261:CDS | 35.0% | |
| AGCATAGTACATAAGCTTGA+AGG | + | chr4.2:36810047-36810066 | MS.gene23261:CDS | 35.0% | |
| AGTGAACACTTTCTCGAAAT+CGG | - | chr4.2:36808656-36808675 | None:intergenic | 35.0% | |
| ATATTGTATCTGAGCAGCAT+TGG | - | chr4.2:36810140-36810159 | None:intergenic | 35.0% | |
| ATGAGTGAATGCCTCATTAT+TGG | - | chr4.2:36808360-36808379 | None:intergenic | 35.0% | |
| ATTCCAAAGGTTATAGCTCT+TGG | + | chr4.2:36810005-36810024 | MS.gene23261:CDS | 35.0% | |
| GAAGTTGTTATCTTACAGCT+TGG | + | chr4.2:36809020-36809039 | MS.gene23261:CDS | 35.0% | |
| GGAAACATAACAGAAACCAT+TGG | - | chr4.2:36809633-36809652 | None:intergenic | 35.0% | |
| GTTGTGTGTATTGTTGGAAA+TGG | + | chr4.2:36808324-36808343 | MS.gene23261:intron | 35.0% | |
| TACTTATTTGCGCAAAACCA+TGG | + | chr4.2:36810181-36810200 | MS.gene23261:CDS | 35.0% | |
| TATTGTATCTGAGCAGCATT+GGG | - | chr4.2:36810139-36810158 | None:intergenic | 35.0% | |
| TCAATCTACTGTCATGAAAG+AGG | + | chr4.2:36810505-36810524 | MS.gene23261:CDS | 35.0% | |
| TCATTGGAATGAAATCTGGT+GGG | + | chr4.2:36808395-36808414 | MS.gene23261:intron | 35.0% | |
| TCGAATTATTCCAAGACACA+AGG | + | chr4.2:36810376-36810395 | MS.gene23261:CDS | 35.0% | |
| TCGTTAAGGGAGAGTTTATT+GGG | + | chr4.2:36808869-36808888 | MS.gene23261:CDS | 35.0% | |
| TGTTGTGTTGTGTGTATTGT+TGG | + | chr4.2:36808318-36808337 | MS.gene23261:intron | 35.0% | |
| TTCGTTAAGGGAGAGTTTAT+TGG | + | chr4.2:36808868-36808887 | MS.gene23261:CDS | 35.0% | |
| TTGGTAAGTTGCTTGCATTT+CGG | + | chr4.2:36809335-36809354 | MS.gene23261:CDS | 35.0% | |
| TTTAAAGAAGCAATGCGGAA+GGG | + | chr4.2:36807866-36807885 | MS.gene23261:CDS | 35.0% | |
| ! | CTCAGCAGATTAGTTAATTG+AGG | - | chr4.2:36809925-36809944 | None:intergenic | 35.0% |
| ! | GGGAAATTTTACAAGCATGT+TGG | - | chr4.2:36809744-36809763 | None:intergenic | 35.0% |
| ! | TAATGAGGCATTCACTCATT+CGG | + | chr4.2:36808361-36808380 | MS.gene23261:intron | 35.0% |
| ! | TTATTCGGTGAAACACATGT+GGG | - | chr4.2:36808547-36808566 | None:intergenic | 35.0% |
| !! | AAGCTCATTTTGATGTCAAG+AGG | + | chr4.2:36808799-36808818 | MS.gene23261:CDS | 35.0% |
| !! | AGCTCATTTTGATGTCAAGA+GGG | + | chr4.2:36808800-36808819 | MS.gene23261:CDS | 35.0% |
| !! | GGTAATTTGGTTGATAGGTT+GGG | + | chr4.2:36807911-36807930 | MS.gene23261:CDS | 35.0% |
| !! | TAGAGTTGTCGGTGTTAAAA+AGG | + | chr4.2:36808226-36808245 | MS.gene23261:intron | 35.0% |
| !! | TGGTAATTTGGTTGATAGGT+TGG | + | chr4.2:36807910-36807929 | MS.gene23261:CDS | 35.0% |
| !! | TTTTAAAGAAGCAATGCGGA+AGG | + | chr4.2:36807865-36807884 | MS.gene23261:CDS | 35.0% |
| !!! | AAAGTTTTTTCAGGACCTAG+GGG | + | chr4.2:36809700-36809719 | MS.gene23261:CDS | 35.0% |
| !!! | AATGGTCTTTTGTGTTGACT+TGG | + | chr4.2:36809468-36809487 | MS.gene23261:CDS | 35.0% |
| !!! | GTAAAGTTTTTTCAGGACCT+AGG | + | chr4.2:36809698-36809717 | MS.gene23261:CDS | 35.0% |
| AAGGCTATAAGTGAGTAGAG+TGG | - | chr4.2:36809765-36809784 | None:intergenic | 40.0% | |
| ACCCATTGACACATTGACAT+CGG | + | chr4.2:36808129-36808148 | MS.gene23261:intron | 40.0% | |
| ACCGATGTCAATGTGTCAAT+GGG | - | chr4.2:36808133-36808152 | None:intergenic | 40.0% | |
| AGAGTTTAATGGAGTCAGGA+GGG | + | chr4.2:36808966-36808985 | MS.gene23261:CDS | 40.0% | |
| AGCTATTGAGATTCGTAGGA+AGG | + | chr4.2:36807829-36807848 | MS.gene23261:CDS | 40.0% | |
| AGGCTATAAGTGAGTAGAGT+GGG | - | chr4.2:36809764-36809783 | None:intergenic | 40.0% | |
| ATTATGGGATTACCCGAGAT+GGG | + | chr4.2:36809419-36809438 | MS.gene23261:CDS | 40.0% | |
| CAATGACATCGTGCAAAGTT+CGG | - | chr4.2:36810208-36810227 | None:intergenic | 40.0% | |
| CAGAGTGATAAACTTTGTGG+TGG | - | chr4.2:36809872-36809891 | None:intergenic | 40.0% | |
| CAGGCCTAATCTTCTTGTAA+AGG | - | chr4.2:36809784-36809803 | None:intergenic | 40.0% | |
| CGTTAAGGGAGAGTTTATTG+GGG | + | chr4.2:36808870-36808889 | MS.gene23261:CDS | 40.0% | |
| CTAGCACTCACTCTCTTATT+CGG | - | chr4.2:36808562-36808581 | None:intergenic | 40.0% | |
| GAGGGAAACTTGAGTCTATA+AGG | + | chr4.2:36808818-36808837 | MS.gene23261:CDS | 40.0% | |
| GATTGCCATAGCCAATAATG+AGG | + | chr4.2:36808346-36808365 | MS.gene23261:intron | 40.0% | |
| GGGGATGCAATGTTAAAAAG+TGG | + | chr4.2:36808889-36808908 | MS.gene23261:CDS | 40.0% | |
| GTCATTGGAATGAAATCTGG+TGG | + | chr4.2:36808394-36808413 | MS.gene23261:intron | 40.0% | |
| GTGCAGTTCTATCTGGATAT+GGG | + | chr4.2:36809060-36809079 | MS.gene23261:CDS | 40.0% | |
| GTGGTCATTGGAATGAAATC+TGG | + | chr4.2:36808391-36808410 | MS.gene23261:intron | 40.0% | |
| TACCGATGTCAATGTGTCAA+TGG | - | chr4.2:36808134-36808153 | None:intergenic | 40.0% | |
| TAGAGTTTAATGGAGTCAGG+AGG | + | chr4.2:36808965-36808984 | MS.gene23261:CDS | 40.0% | |
| TATTATGGGATTACCCGAGA+TGG | + | chr4.2:36809418-36809437 | MS.gene23261:CDS | 40.0% | |
| TATTCCAAGACACAAGGTTC+TGG | + | chr4.2:36810382-36810401 | MS.gene23261:CDS | 40.0% | |
| TGGAAGCTATTGAGATTCGT+AGG | + | chr4.2:36807825-36807844 | MS.gene23261:CDS | 40.0% | |
| TGGGATTCATTTCGAAAGTG+TGG | + | chr4.2:36808519-36808538 | MS.gene23261:intron | 40.0% | |
| TGTGCAGTTCTATCTGGATA+TGG | + | chr4.2:36809059-36809078 | MS.gene23261:CDS | 40.0% | |
| TTACAAGAAGATTAGGCCTG+TGG | + | chr4.2:36809784-36809803 | MS.gene23261:CDS | 40.0% | |
| TTACAGCTTGGAAGAAGTGA+AGG | + | chr4.2:36809032-36809051 | MS.gene23261:CDS | 40.0% | |
| TTTGGAAGAAATGAGCCGAA+AGG | + | chr4.2:36809146-36809165 | MS.gene23261:CDS | 40.0% | |
| ! | ATATTCTTGATGACCAAGGC+TGG | + | chr4.2:36809966-36809985 | MS.gene23261:CDS | 40.0% |
| ! | CTTATTCGGTGAAACACATG+TGG | - | chr4.2:36808548-36808567 | None:intergenic | 40.0% |
| ! | GAATGCCTCATTATTGGCTA+TGG | - | chr4.2:36808354-36808373 | None:intergenic | 40.0% |
| ! | GGGATTCATTTCGAAAGTGT+GGG | + | chr4.2:36808520-36808539 | MS.gene23261:intron | 40.0% |
| ! | GGTCATATTCTTGATGACCA+AGG | + | chr4.2:36809962-36809981 | MS.gene23261:intron | 40.0% |
| ! | GGTTTAGATGCGAAGGATTT+TGG | + | chr4.2:36809081-36809100 | MS.gene23261:CDS | 40.0% |
| ! | GTGGAGATAATGTTTTGCTG+CGG | + | chr4.2:36808908-36808927 | MS.gene23261:CDS | 40.0% |
| ! | TTGAAGTCGGTGTTCGTTAA+GGG | + | chr4.2:36808856-36808875 | MS.gene23261:CDS | 40.0% |
| !! | AATTTGGTTGATAGGTTGGG+TGG | + | chr4.2:36807914-36807933 | MS.gene23261:CDS | 40.0% |
| !! | GCAATTCTCTTGCTGTTATC+AGG | + | chr4.2:36810330-36810349 | MS.gene23261:intron | 40.0% |
| !! | GTGCCACTTATCAGGTATTA+TGG | + | chr4.2:36808046-36808065 | MS.gene23261:intron | 40.0% |
| !! | TTTTTCAGCTATTCCCTCGA+GGG | + | chr4.2:36810353-36810372 | MS.gene23261:CDS | 40.0% |
| ACGATGTCATTGAGTTTCCC+AGG | + | chr4.2:36810216-36810235 | MS.gene23261:CDS | 45.0% | |
| AGCTCTCGGTCACTATACTT+TGG | + | chr4.2:36809128-36809147 | MS.gene23261:CDS | 45.0% | |
| CTATAAGGAACCGTGTTGAG+TGG | + | chr4.2:36808833-36808852 | MS.gene23261:CDS | 45.0% | |
| GCAATGCGGAAGGGTAAATT+TGG | + | chr4.2:36807875-36807894 | MS.gene23261:CDS | 45.0% | |
| GGAGATGACTATTGTGCCAA+AGG | + | chr4.2:36809489-36809508 | MS.gene23261:CDS | 45.0% | |
| GGATATGGGTTTAGATGCGA+AGG | + | chr4.2:36809074-36809093 | MS.gene23261:CDS | 45.0% | |
| GGGCTTGAAAGTAAGGATGT+TGG | + | chr4.2:36809316-36809335 | MS.gene23261:CDS | 45.0% | |
| GGTCCAAGAGCTATAACCTT+TGG | - | chr4.2:36810011-36810030 | None:intergenic | 45.0% | |
| GTATAGTGACCGAGAGCTTT+AGG | - | chr4.2:36809126-36809145 | None:intergenic | 45.0% | |
| TAACCAGGTGTGTGTTGTGT+CGG | + | chr4.2:36808183-36808202 | MS.gene23261:intron | 45.0% | |
| TCACTCATTCGGCACATATG+TGG | + | chr4.2:36808372-36808391 | MS.gene23261:intron | 45.0% | |
| TCGTAGGAAGGTTACTGAAG+AGG | + | chr4.2:36807841-36807860 | MS.gene23261:CDS | 45.0% | |
| TGCATTTCGGCCACAATTGA+TGG | + | chr4.2:36809348-36809367 | MS.gene23261:CDS | 45.0% | |
| TGGAATAATTCGACCCTCGA+GGG | - | chr4.2:36810369-36810388 | None:intergenic | 45.0% | |
| TGTGTCTCGTCACTTCATGT+GGG | + | chr4.2:36808500-36808519 | MS.gene23261:intron | 45.0% | |
| TTAATGGAGTCAGGAGGGAA+TGG | + | chr4.2:36808971-36808990 | MS.gene23261:CDS | 45.0% | |
| TTACGTCTGGGCTGTAGATT+GGG | - | chr4.2:36810543-36810562 | None:intergenic | 45.0% | |
| TTCGGCACATATGTGGTCAT+TGG | + | chr4.2:36808379-36808398 | MS.gene23261:intron | 45.0% | |
| TTGGAATAATTCGACCCTCG+AGG | - | chr4.2:36810370-36810389 | None:intergenic | 45.0% | |
| ! | AATGTTTTGCTGCGGAGTGA+CGG | + | chr4.2:36808916-36808935 | MS.gene23261:CDS | 45.0% |
| ! | CGTGCAGCATTGAAGAACAA+TGG | + | chr4.2:36809371-36809390 | MS.gene23261:CDS | 45.0% |
| ! | GTTGAAGTCGGTGTTCGTTA+AGG | + | chr4.2:36808855-36808874 | MS.gene23261:CDS | 45.0% |
| !! | CTCAAGTTGTGCCACTTATC+AGG | + | chr4.2:36808038-36808057 | MS.gene23261:CDS | 45.0% |
| !! | GGATGGGTTATGTTGTGAGT+CGG | + | chr4.2:36808992-36809011 | MS.gene23261:CDS | 45.0% |
| !! | GTTTTTCAGCTATTCCCTCG+AGG | + | chr4.2:36810352-36810371 | MS.gene23261:CDS | 45.0% |
| ACCTAGGGGTTCGAAATGAC+GGG | + | chr4.2:36809714-36809733 | MS.gene23261:CDS | 50.0% | |
| ATCGTGCAAAGTTCGGACCA+TGG | - | chr4.2:36810201-36810220 | None:intergenic | 50.0% | |
| ATGCTGCACGCCATCAATTG+TGG | - | chr4.2:36809361-36809380 | None:intergenic | 50.0% | |
| CATTCTCCTCATCCCATCTC+GGG | - | chr4.2:36809434-36809453 | None:intergenic | 50.0% | |
| CCGACTTCAACCACTCAACA+CGG | - | chr4.2:36808846-36808865 | None:intergenic | 50.0% | |
| CCGTGTTGAGTGGTTGAAGT+CGG | + | chr4.2:36808843-36808862 | MS.gene23261:CDS | 50.0% | |
| GACCTAGGGGTTCGAAATGA+CGG | + | chr4.2:36809713-36809732 | MS.gene23261:CDS | 50.0% | |
| GCATTCTCCTCATCCCATCT+CGG | - | chr4.2:36809435-36809454 | None:intergenic | 50.0% | |
| GGTTCGTGTGCAGTTCTATC+TGG | + | chr4.2:36809053-36809072 | MS.gene23261:CDS | 50.0% | |
| GTGTGTCTCGTCACTTCATG+TGG | + | chr4.2:36808499-36808518 | MS.gene23261:intron | 50.0% | |
| TACGTCTGGGCTGTAGATTG+GGG | - | chr4.2:36810542-36810561 | None:intergenic | 50.0% | |
| TCCACCAGAACCTTGTGTCT+TGG | - | chr4.2:36810389-36810408 | None:intergenic | 50.0% | |
| TGTCTCTCGGCATACGTCTT+CGG | + | chr4.2:36810087-36810106 | MS.gene23261:CDS | 50.0% | |
| TTCTTCAGTGACTCCAGCCT+TGG | - | chr4.2:36809982-36810001 | None:intergenic | 50.0% | |
| ! | ATGTTTTGCTGCGGAGTGAC+GGG | + | chr4.2:36808917-36808936 | MS.gene23261:CDS | 50.0% |
| ! | TCCAAGACACAAGGTTCTGG+TGG | + | chr4.2:36810385-36810404 | MS.gene23261:CDS | 50.0% |
| !! | TGCGAAGGATTTTGGCACCA+TGG | + | chr4.2:36809089-36809108 | MS.gene23261:CDS | 50.0% |
| AGCTCTTGGACCTGAGCTCT+TGG | + | chr4.2:36810019-36810038 | MS.gene23261:CDS | 55.0% | |
| ATGCTGCATCCCAAGAGCTC+AGG | - | chr4.2:36810032-36810051 | None:intergenic | 55.0% | |
| GCTCTTGGACCTGAGCTCTT+GGG | + | chr4.2:36810020-36810039 | MS.gene23261:CDS | 55.0% | |
| GGAGTCAGGAGGGAATGGAT+GGG | + | chr4.2:36808976-36808995 | MS.gene23261:CDS | 55.0% | |
| GGATTACCCGAGATGGGATG+AGG | + | chr4.2:36809425-36809444 | MS.gene23261:CDS | 55.0% | |
| GGCATACGTCTTCGGCAACT+GGG | + | chr4.2:36810095-36810114 | MS.gene23261:CDS | 55.0% | |
| TCCCGTCATTTCGAACCCCT+AGG | - | chr4.2:36809718-36809737 | None:intergenic | 55.0% | |
| TGGAGTCAGGAGGGAATGGA+TGG | + | chr4.2:36808975-36808994 | MS.gene23261:CDS | 55.0% | |
| TGTCCGACACAACACACACC+TGG | - | chr4.2:36808189-36808208 | None:intergenic | 55.0% | |
| ! | TGTTTTGCTGCGGAGTGACG+GGG | + | chr4.2:36808918-36808937 | MS.gene23261:CDS | 55.0% |
| CGGCATACGTCTTCGGCAAC+TGG | + | chr4.2:36810094-36810113 | MS.gene23261:CDS | 60.0% | |
| ! | GCTGCGGAGTGACGGGGAGT+TGG | + | chr4.2:36808924-36808943 | MS.gene23261:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 36807818 | 36810562 | 36807818 | ID=MS.gene23261 |
| chr4.2 | mRNA | 36807818 | 36810562 | 36807818 | ID=MS.gene23261.t1;Parent=MS.gene23261 |
| chr4.2 | exon | 36807818 | 36808059 | 36807818 | ID=MS.gene23261.t1.exon1;Parent=MS.gene23261.t1 |
| chr4.2 | CDS | 36807818 | 36808059 | 36807818 | ID=cds.MS.gene23261.t1;Parent=MS.gene23261.t1 |
| chr4.2 | exon | 36808759 | 36809167 | 36808759 | ID=MS.gene23261.t1.exon2;Parent=MS.gene23261.t1 |
| chr4.2 | CDS | 36808759 | 36809167 | 36808759 | ID=cds.MS.gene23261.t1;Parent=MS.gene23261.t1 |
| chr4.2 | exon | 36809295 | 36809510 | 36809295 | ID=MS.gene23261.t1.exon3;Parent=MS.gene23261.t1 |
| chr4.2 | CDS | 36809295 | 36809510 | 36809295 | ID=cds.MS.gene23261.t1;Parent=MS.gene23261.t1 |
| chr4.2 | exon | 36809698 | 36809805 | 36809698 | ID=MS.gene23261.t1.exon4;Parent=MS.gene23261.t1 |
| chr4.2 | CDS | 36809698 | 36809805 | 36809698 | ID=cds.MS.gene23261.t1;Parent=MS.gene23261.t1 |
| chr4.2 | exon | 36809963 | 36810237 | 36809963 | ID=MS.gene23261.t1.exon5;Parent=MS.gene23261.t1 |
| chr4.2 | CDS | 36809963 | 36810237 | 36809963 | ID=cds.MS.gene23261.t1;Parent=MS.gene23261.t1 |
| chr4.2 | exon | 36810352 | 36810562 | 36810352 | ID=MS.gene23261.t1.exon6;Parent=MS.gene23261.t1 |
| chr4.2 | CDS | 36810352 | 36810562 | 36810352 | ID=cds.MS.gene23261.t1;Parent=MS.gene23261.t1 |
| Gene Sequence |
| Protein sequence |
