Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24540.t1 | XP_003589034.1 | 98.3 | 344 | 6 | 0 | 1 | 344 | 1 | 344 | 3.00E-194 | 687.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24540.t1 | Q9XGZ9 | 53.5 | 340 | 140 | 8 | 1 | 333 | 1 | 329 | 1.9e-88 | 327.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24540.t1 | G7JMS8 | 98.3 | 344 | 6 | 0 | 1 | 344 | 1 | 344 | 2.2e-194 | 687.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene24540 | -0.81069 | 1.02E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene24540 | -0.806544 | 7.81E-50 | -1.69E-46 |
| MS.gene049222 | MS.gene24540 | -0.800366 | 1.49E-48 | -1.69E-46 |
| MS.gene049259 | MS.gene24540 | 0.813474 | 2.51E-51 | -1.69E-46 |
| MS.gene049281 | MS.gene24540 | 0.806861 | 6.70E-50 | -1.69E-46 |
| MS.gene049320 | MS.gene24540 | -0.807639 | 4.58E-50 | -1.69E-46 |
| MS.gene049549 | MS.gene24540 | 0.816253 | 6.08E-52 | -1.69E-46 |
| MS.gene049611 | MS.gene24540 | 0.873691 | 1.21E-67 | -1.69E-46 |
| MS.gene049634 | MS.gene24540 | 0.875073 | 4.11E-68 | -1.69E-46 |
| MS.gene050082 | MS.gene24540 | 0.821603 | 3.70E-53 | -1.69E-46 |
| MS.gene050165 | MS.gene24540 | -0.805411 | 1.35E-49 | -1.69E-46 |
| MS.gene050216 | MS.gene24540 | -0.801985 | 6.95E-49 | -1.69E-46 |
| MS.gene050323 | MS.gene24540 | -0.803915 | 2.78E-49 | -1.69E-46 |
| MS.gene050333 | MS.gene24540 | -0.800542 | 1.37E-48 | -1.69E-46 |
| MS.gene050381 | MS.gene24540 | 0.848898 | 4.57E-60 | -1.69E-46 |
| MS.gene050496 | MS.gene24540 | -0.81897 | 1.48E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene24540 | -0.829175 | 5.96E-55 | -1.69E-46 |
| MS.gene050612 | MS.gene24540 | -0.847922 | 8.51E-60 | -1.69E-46 |
| MS.gene050675 | MS.gene24540 | -0.833469 | 5.24E-56 | -1.69E-46 |
| MS.gene05079 | MS.gene24540 | 0.857141 | 2.00E-62 | -1.69E-46 |
| MS.gene050809 | MS.gene24540 | 0.818595 | 1.81E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene24540 | -0.840385 | 8.98E-58 | -1.69E-46 |
| MS.gene050871 | MS.gene24540 | -0.837918 | 3.92E-57 | -1.69E-46 |
| MS.gene051044 | MS.gene24540 | 0.841566 | 4.40E-58 | -1.69E-46 |
| MS.gene05104 | MS.gene24540 | 0.865599 | 5.25E-65 | -1.69E-46 |
| MS.gene051127 | MS.gene24540 | 0.86368 | 2.09E-64 | -1.69E-46 |
| MS.gene051138 | MS.gene24540 | 0.880337 | 5.96E-70 | -1.69E-46 |
| MS.gene051268 | MS.gene24540 | -0.81862 | 1.78E-52 | -1.69E-46 |
| MS.gene051364 | MS.gene24540 | 0.832097 | 1.15E-55 | -1.69E-46 |
| MS.gene051366 | MS.gene24540 | 0.82974 | 4.35E-55 | -1.69E-46 |
| MS.gene051422 | MS.gene24540 | 0.823271 | 1.52E-53 | -1.69E-46 |
| MS.gene051632 | MS.gene24540 | 0.93975 | 7.51E-100 | -1.69E-46 |
| MS.gene051651 | MS.gene24540 | 0.825532 | 4.45E-54 | -1.69E-46 |
| MS.gene051863 | MS.gene24540 | 0.806098 | 9.70E-50 | -1.69E-46 |
| MS.gene051874 | MS.gene24540 | -0.80455 | 2.05E-49 | -1.69E-46 |
| MS.gene052211 | MS.gene24540 | 0.810989 | 8.76E-51 | -1.69E-46 |
| MS.gene05240 | MS.gene24540 | 0.812629 | 3.85E-51 | -1.69E-46 |
| MS.gene05244 | MS.gene24540 | 0.805226 | 1.48E-49 | -1.69E-46 |
| MS.gene052606 | MS.gene24540 | 0.803547 | 3.31E-49 | -1.69E-46 |
| MS.gene052802 | MS.gene24540 | 0.801929 | 7.14E-49 | -1.69E-46 |
| MS.gene052805 | MS.gene24540 | 0.823581 | 1.28E-53 | -1.69E-46 |
| MS.gene053420 | MS.gene24540 | 0.87914 | 1.59E-69 | -1.69E-46 |
| MS.gene053479 | MS.gene24540 | -0.805934 | 1.05E-49 | -1.69E-46 |
| MS.gene053488 | MS.gene24540 | 0.876314 | 1.54E-68 | -1.69E-46 |
| MS.gene053561 | MS.gene24540 | 0.828536 | 8.52E-55 | -1.69E-46 |
| MS.gene053887 | MS.gene24540 | 0.833479 | 5.21E-56 | -1.69E-46 |
| MS.gene054054 | MS.gene24540 | 0.810189 | 1.30E-50 | -1.69E-46 |
| MS.gene054056 | MS.gene24540 | 0.805317 | 1.41E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene24540 | -0.800304 | 1.53E-48 | -1.69E-46 |
| MS.gene054706 | MS.gene24540 | 0.8092 | 2.13E-50 | -1.69E-46 |
| MS.gene054707 | MS.gene24540 | 0.814686 | 1.36E-51 | -1.69E-46 |
| MS.gene054708 | MS.gene24540 | 0.800924 | 1.15E-48 | -1.69E-46 |
| MS.gene054954 | MS.gene24540 | -0.808741 | 2.67E-50 | -1.69E-46 |
| MS.gene055124 | MS.gene24540 | 0.829479 | 5.03E-55 | -1.69E-46 |
| MS.gene055154 | MS.gene24540 | 0.868491 | 6.28E-66 | -1.69E-46 |
| MS.gene055158 | MS.gene24540 | 0.814163 | 1.77E-51 | -1.69E-46 |
| MS.gene055202 | MS.gene24540 | 0.813966 | 1.96E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene24540 | -0.804487 | 2.11E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene24540 | -0.826844 | 2.17E-54 | -1.69E-46 |
| MS.gene055577 | MS.gene24540 | -0.825557 | 4.39E-54 | -1.69E-46 |
| MS.gene055748 | MS.gene24540 | -0.806738 | 7.11E-50 | -1.69E-46 |
| MS.gene055751 | MS.gene24540 | -0.811963 | 5.38E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene24540 | -0.809767 | 1.61E-50 | -1.69E-46 |
| MS.gene055942 | MS.gene24540 | 0.851785 | 7.08E-61 | -1.69E-46 |
| MS.gene056224 | MS.gene24540 | 0.835158 | 1.97E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene24540 | -0.830265 | 3.24E-55 | -1.69E-46 |
| MS.gene056590 | MS.gene24540 | 0.808129 | 3.60E-50 | -1.69E-46 |
| MS.gene056591 | MS.gene24540 | 0.807435 | 5.06E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene24540 | -0.800174 | 1.63E-48 | -1.69E-46 |
| MS.gene056748 | MS.gene24540 | 0.842813 | 2.06E-58 | -1.69E-46 |
| MS.gene056856 | MS.gene24540 | 0.878715 | 2.24E-69 | -1.69E-46 |
| MS.gene056857 | MS.gene24540 | 0.820256 | 7.55E-53 | -1.69E-46 |
| MS.gene057014 | MS.gene24540 | 0.804906 | 1.73E-49 | -1.69E-46 |
| MS.gene057261 | MS.gene24540 | 0.807192 | 5.70E-50 | -1.69E-46 |
| MS.gene057544 | MS.gene24540 | 0.818113 | 2.32E-52 | -1.69E-46 |
| MS.gene057548 | MS.gene24540 | 0.806849 | 6.74E-50 | -1.69E-46 |
| MS.gene057549 | MS.gene24540 | 0.842446 | 2.57E-58 | -1.69E-46 |
| MS.gene057768 | MS.gene24540 | 0.825916 | 3.61E-54 | -1.69E-46 |
| MS.gene058068 | MS.gene24540 | 0.83766 | 4.56E-57 | -1.69E-46 |
| MS.gene058093 | MS.gene24540 | 0.83936 | 1.66E-57 | -1.69E-46 |
| MS.gene058099 | MS.gene24540 | 0.878447 | 2.79E-69 | -1.69E-46 |
| MS.gene058108 | MS.gene24540 | 0.823989 | 1.03E-53 | -1.69E-46 |
| MS.gene058109 | MS.gene24540 | 0.829635 | 4.61E-55 | -1.69E-46 |
| MS.gene058111 | MS.gene24540 | 0.82311 | 1.65E-53 | -1.69E-46 |
| MS.gene058117 | MS.gene24540 | 0.83519 | 1.94E-56 | -1.69E-46 |
| MS.gene058157 | MS.gene24540 | -0.801363 | 9.33E-49 | -1.69E-46 |
| MS.gene058171 | MS.gene24540 | 0.851011 | 1.17E-60 | -1.69E-46 |
| MS.gene058173 | MS.gene24540 | 0.844709 | 6.39E-59 | -1.69E-46 |
| MS.gene058175 | MS.gene24540 | 0.858561 | 7.57E-63 | -1.69E-46 |
| MS.gene058179 | MS.gene24540 | 0.806795 | 6.92E-50 | -1.69E-46 |
| MS.gene058268 | MS.gene24540 | 0.842136 | 3.11E-58 | -1.69E-46 |
| MS.gene058269 | MS.gene24540 | 0.838744 | 2.40E-57 | -1.69E-46 |
| MS.gene058334 | MS.gene24540 | 0.81092 | 9.07E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene24540 | -0.80927 | 2.06E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene24540 | -0.803132 | 4.03E-49 | -1.69E-46 |
| MS.gene058603 | MS.gene24540 | 0.847094 | 1.44E-59 | -1.69E-46 |
| MS.gene058840 | MS.gene24540 | 0.804451 | 2.15E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene24540 | -0.827851 | 1.25E-54 | -1.69E-46 |
| MS.gene059045 | MS.gene24540 | 0.83797 | 3.79E-57 | -1.69E-46 |
| MS.gene059070 | MS.gene24540 | 0.802413 | 5.68E-49 | -1.69E-46 |
| MS.gene059223 | MS.gene24540 | 0.802486 | 5.48E-49 | -1.69E-46 |
| MS.gene059315 | MS.gene24540 | 0.804224 | 2.39E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene24540 | -0.813 | 3.19E-51 | -1.69E-46 |
| MS.gene059682 | MS.gene24540 | 0.814225 | 1.72E-51 | -1.69E-46 |
| MS.gene059694 | MS.gene24540 | 0.807523 | 4.85E-50 | -1.69E-46 |
| MS.gene059697 | MS.gene24540 | 0.80356 | 3.29E-49 | -1.69E-46 |
| MS.gene059703 | MS.gene24540 | 0.811054 | 8.48E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene24540 | -0.831354 | 1.75E-55 | -1.69E-46 |
| MS.gene059916 | MS.gene24540 | 0.809048 | 2.29E-50 | -1.69E-46 |
| MS.gene059953 | MS.gene24540 | 0.809273 | 2.05E-50 | -1.69E-46 |
| MS.gene059955 | MS.gene24540 | 0.815938 | 7.15E-52 | -1.69E-46 |
| MS.gene060405 | MS.gene24540 | 0.8022 | 6.28E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene24540 | -0.831374 | 1.73E-55 | -1.69E-46 |
| MS.gene060778 | MS.gene24540 | -0.807735 | 4.37E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene24540 | -0.817922 | 2.56E-52 | -1.69E-46 |
| MS.gene060823 | MS.gene24540 | 0.80623 | 9.10E-50 | -1.69E-46 |
| MS.gene06084 | MS.gene24540 | 0.806358 | 8.55E-50 | -1.69E-46 |
| MS.gene060982 | MS.gene24540 | -0.807211 | 5.65E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24540.t1 | MTR_1g016620 | 98.256 | 344 | 6 | 0 | 1 | 344 | 1 | 344 | 0.0 | 705 |
| MS.gene24540.t1 | MTR_7g080170 | 46.386 | 332 | 149 | 4 | 33 | 335 | 60 | 391 | 9.58e-97 | 296 |
| MS.gene24540.t1 | MTR_4g037470 | 46.965 | 313 | 152 | 3 | 33 | 331 | 61 | 373 | 1.65e-96 | 294 |
| MS.gene24540.t1 | MTR_7g070510 | 45.631 | 309 | 155 | 3 | 37 | 332 | 60 | 368 | 1.21e-95 | 291 |
| MS.gene24540.t1 | MTR_7g021530 | 47.799 | 318 | 142 | 6 | 33 | 328 | 52 | 367 | 5.30e-94 | 286 |
| MS.gene24540.t1 | MTR_2g090190 | 47.756 | 312 | 150 | 3 | 33 | 331 | 55 | 366 | 1.01e-93 | 287 |
| MS.gene24540.t1 | MTR_4g037470 | 45.652 | 322 | 152 | 4 | 33 | 331 | 61 | 382 | 1.97e-93 | 286 |
| MS.gene24540.t1 | MTR_7g021530 | 47.799 | 318 | 142 | 6 | 33 | 328 | 93 | 408 | 3.40e-93 | 285 |
| MS.gene24540.t1 | MTR_8g017240 | 48.829 | 299 | 143 | 5 | 33 | 329 | 50 | 340 | 1.56e-88 | 271 |
| MS.gene24540.t1 | MTR_7g021530 | 48.288 | 292 | 127 | 6 | 59 | 328 | 28 | 317 | 2.09e-86 | 265 |
| MS.gene24540.t1 | MTR_4g013295 | 45.574 | 305 | 156 | 5 | 40 | 336 | 49 | 351 | 6.16e-86 | 263 |
| MS.gene24540.t1 | MTR_1g083690 | 43.771 | 297 | 165 | 2 | 35 | 329 | 55 | 351 | 1.45e-84 | 259 |
| MS.gene24540.t1 | MTR_4g120410 | 40.741 | 324 | 182 | 6 | 21 | 337 | 41 | 361 | 9.89e-82 | 253 |
| MS.gene24540.t1 | MTR_2g435550 | 41.562 | 320 | 179 | 5 | 21 | 334 | 28 | 345 | 1.20e-81 | 252 |
| MS.gene24540.t1 | MTR_2g435550 | 41.562 | 320 | 179 | 5 | 21 | 334 | 42 | 359 | 1.93e-81 | 252 |
| MS.gene24540.t1 | MTR_7g080170 | 57.346 | 211 | 89 | 1 | 126 | 335 | 73 | 283 | 2.38e-81 | 253 |
| MS.gene24540.t1 | MTR_7g112490 | 42.020 | 307 | 159 | 5 | 38 | 329 | 78 | 380 | 1.25e-80 | 251 |
| MS.gene24540.t1 | MTR_7g112490 | 42.020 | 307 | 159 | 5 | 38 | 329 | 60 | 362 | 1.35e-80 | 250 |
| MS.gene24540.t1 | MTR_2g435550 | 42.712 | 295 | 161 | 5 | 21 | 309 | 42 | 334 | 1.09e-75 | 238 |
| MS.gene24540.t1 | MTR_7g021530 | 46.667 | 270 | 121 | 5 | 33 | 280 | 52 | 320 | 1.73e-74 | 233 |
| MS.gene24540.t1 | MTR_7g021530 | 46.667 | 270 | 121 | 5 | 33 | 280 | 93 | 361 | 4.57e-74 | 233 |
| MS.gene24540.t1 | MTR_7g021530 | 40.741 | 189 | 89 | 5 | 33 | 199 | 52 | 239 | 3.00e-35 | 129 |
| MS.gene24540.t1 | MTR_7g021530 | 40.741 | 189 | 89 | 5 | 33 | 199 | 93 | 280 | 1.09e-34 | 129 |
| MS.gene24540.t1 | MTR_4g118340 | 27.304 | 293 | 170 | 7 | 51 | 324 | 68 | 336 | 3.96e-31 | 121 |
| MS.gene24540.t1 | MTR_6g087000 | 29.180 | 305 | 170 | 8 | 42 | 324 | 97 | 377 | 7.06e-30 | 120 |
| MS.gene24540.t1 | MTR_6g087000 | 29.180 | 305 | 170 | 8 | 42 | 324 | 97 | 377 | 1.24e-29 | 120 |
| MS.gene24540.t1 | MTR_3g105730 | 35.398 | 226 | 115 | 8 | 114 | 331 | 82 | 284 | 5.62e-28 | 111 |
| MS.gene24540.t1 | MTR_3g105730 | 32.197 | 264 | 131 | 8 | 70 | 331 | 45 | 262 | 8.26e-28 | 110 |
| MS.gene24540.t1 | MTR_1g014640 | 32.911 | 237 | 119 | 6 | 70 | 305 | 110 | 307 | 1.33e-26 | 108 |
| MS.gene24540.t1 | MTR_1g013400 | 32.911 | 237 | 119 | 6 | 70 | 305 | 110 | 307 | 1.33e-26 | 108 |
| MS.gene24540.t1 | MTR_2g020970 | 28.364 | 275 | 155 | 5 | 68 | 324 | 87 | 337 | 2.01e-26 | 108 |
| MS.gene24540.t1 | MTR_2g020970 | 28.364 | 275 | 155 | 5 | 68 | 324 | 87 | 337 | 5.50e-26 | 108 |
| MS.gene24540.t1 | MTR_5g009370 | 33.921 | 227 | 109 | 8 | 68 | 288 | 87 | 278 | 8.89e-22 | 94.7 |
| MS.gene24540.t1 | MTR_4g125810 | 32.189 | 233 | 127 | 8 | 57 | 287 | 242 | 445 | 7.82e-21 | 93.6 |
| MS.gene24540.t1 | MTR_4g094542 | 29.151 | 271 | 149 | 9 | 39 | 307 | 121 | 350 | 3.01e-20 | 90.9 |
| MS.gene24540.t1 | MTR_3g104710 | 31.818 | 242 | 136 | 8 | 49 | 287 | 269 | 484 | 3.93e-20 | 91.7 |
| MS.gene24540.t1 | MTR_1g115570 | 30.000 | 240 | 124 | 8 | 67 | 305 | 125 | 321 | 4.18e-20 | 90.1 |
| MS.gene24540.t1 | MTR_5g080680 | 31.061 | 264 | 131 | 9 | 41 | 290 | 104 | 330 | 1.17e-19 | 89.4 |
| MS.gene24540.t1 | MTR_6g081850 | 30.705 | 241 | 110 | 6 | 67 | 288 | 78 | 280 | 1.66e-18 | 85.1 |
| MS.gene24540.t1 | MTR_3g068200 | 31.780 | 236 | 113 | 10 | 68 | 290 | 123 | 323 | 2.12e-18 | 85.9 |
| MS.gene24540.t1 | MTR_5g063940 | 30.952 | 252 | 133 | 10 | 55 | 305 | 7 | 218 | 1.07e-17 | 81.6 |
| MS.gene24540.t1 | MTR_1g086350 | 30.303 | 231 | 123 | 9 | 64 | 288 | 114 | 312 | 2.34e-17 | 82.8 |
| MS.gene24540.t1 | MTR_5g063940 | 30.952 | 252 | 133 | 10 | 55 | 305 | 54 | 265 | 2.41e-17 | 81.3 |
| MS.gene24540.t1 | MTR_1g086350 | 30.303 | 231 | 123 | 9 | 64 | 288 | 98 | 296 | 2.47e-17 | 82.4 |
| MS.gene24540.t1 | MTR_1g028300 | 29.675 | 246 | 135 | 7 | 46 | 288 | 120 | 330 | 3.33e-17 | 82.4 |
| MS.gene24540.t1 | MTR_8g102550 | 31.364 | 220 | 120 | 7 | 68 | 287 | 152 | 340 | 3.95e-17 | 82.0 |
| MS.gene24540.t1 | MTR_3g107880 | 28.623 | 276 | 148 | 10 | 67 | 335 | 62 | 295 | 8.37e-17 | 80.5 |
| MS.gene24540.t1 | MTR_3g107880 | 28.623 | 276 | 148 | 10 | 67 | 335 | 119 | 352 | 1.27e-16 | 80.5 |
| MS.gene24540.t1 | MTR_3g107880 | 28.623 | 276 | 148 | 10 | 67 | 335 | 120 | 353 | 1.31e-16 | 80.5 |
| MS.gene24540.t1 | MTR_2g040500 | 29.487 | 234 | 123 | 6 | 68 | 283 | 267 | 476 | 1.86e-16 | 80.9 |
| MS.gene24540.t1 | MTR_5g024340 | 29.075 | 227 | 115 | 9 | 67 | 288 | 123 | 308 | 2.00e-16 | 79.7 |
| MS.gene24540.t1 | MTR_1g015110 | 30.804 | 224 | 126 | 8 | 68 | 287 | 290 | 488 | 2.43e-16 | 80.5 |
| MS.gene24540.t1 | MTR_3g091060 | 30.380 | 237 | 125 | 6 | 70 | 305 | 127 | 324 | 3.07e-16 | 79.3 |
| MS.gene24540.t1 | MTR_2g078760 | 28.139 | 231 | 119 | 10 | 115 | 329 | 55 | 254 | 5.10e-16 | 77.0 |
| MS.gene24540.t1 | MTR_3g074610 | 28.807 | 243 | 133 | 9 | 64 | 305 | 62 | 265 | 6.58e-16 | 77.4 |
| MS.gene24540.t1 | MTR_2g078760 | 29.596 | 223 | 126 | 10 | 115 | 329 | 134 | 333 | 6.76e-16 | 77.8 |
| MS.gene24540.t1 | MTR_4g094208 | 29.960 | 247 | 128 | 13 | 62 | 305 | 56 | 260 | 7.59e-16 | 77.0 |
| MS.gene24540.t1 | MTR_3g464700 | 30.279 | 251 | 131 | 12 | 40 | 287 | 89 | 298 | 9.59e-16 | 77.4 |
| MS.gene24540.t1 | MTR_4g123080 | 25.424 | 236 | 135 | 8 | 60 | 288 | 88 | 289 | 1.47e-15 | 77.4 |
| MS.gene24540.t1 | MTR_4g123080 | 25.424 | 236 | 135 | 8 | 60 | 288 | 106 | 307 | 1.58e-15 | 77.4 |
| MS.gene24540.t1 | MTR_1g086350 | 29.464 | 224 | 120 | 9 | 71 | 288 | 19 | 210 | 3.23e-15 | 75.5 |
| MS.gene24540.t1 | MTR_2g008850 | 28.102 | 274 | 150 | 11 | 55 | 327 | 7 | 234 | 4.58e-15 | 73.9 |
| MS.gene24540.t1 | MTR_3g464650 | 30.120 | 249 | 134 | 11 | 40 | 287 | 65 | 274 | 1.09e-14 | 74.3 |
| MS.gene24540.t1 | MTR_4g007440 | 27.500 | 280 | 149 | 10 | 43 | 288 | 28 | 287 | 1.53e-14 | 74.3 |
| MS.gene24540.t1 | MTR_7g090530 | 28.897 | 263 | 139 | 9 | 51 | 288 | 51 | 290 | 1.70e-14 | 74.3 |
| MS.gene24540.t1 | MTR_2g033000 | 25.600 | 250 | 142 | 9 | 67 | 305 | 99 | 315 | 1.89e-14 | 73.9 |
| MS.gene24540.t1 | MTR_2g008850 | 27.881 | 269 | 153 | 10 | 38 | 305 | 36 | 264 | 2.08e-14 | 72.8 |
| MS.gene24540.t1 | MTR_8g463130 | 28.000 | 250 | 121 | 11 | 66 | 305 | 65 | 265 | 3.05e-14 | 72.4 |
| MS.gene24540.t1 | MTR_8g463130 | 28.000 | 250 | 121 | 11 | 66 | 305 | 37 | 237 | 4.29e-14 | 71.6 |
| MS.gene24540.t1 | MTR_3g032660 | 28.617 | 311 | 150 | 14 | 65 | 330 | 65 | 348 | 1.11e-13 | 72.0 |
| MS.gene24540.t1 | MTR_3g032700 | 28.896 | 308 | 147 | 14 | 68 | 330 | 68 | 348 | 1.49e-13 | 71.6 |
| MS.gene24540.t1 | MTR_5g071550 | 29.134 | 254 | 130 | 10 | 40 | 287 | 125 | 334 | 6.02e-13 | 69.7 |
| MS.gene24540.t1 | MTR_1g116260 | 27.419 | 310 | 167 | 13 | 62 | 340 | 74 | 356 | 2.01e-12 | 67.8 |
| MS.gene24540.t1 | MTR_7g090550 | 27.907 | 258 | 121 | 12 | 64 | 288 | 66 | 291 | 2.17e-12 | 68.2 |
| MS.gene24540.t1 | MTR_7g060770 | 24.503 | 302 | 176 | 11 | 40 | 312 | 238 | 516 | 2.42e-12 | 68.2 |
| MS.gene24540.t1 | MTR_4g113345 | 25.284 | 352 | 193 | 14 | 19 | 337 | 10 | 324 | 4.61e-12 | 66.6 |
| MS.gene24540.t1 | MTR_4g076560 | 25.746 | 268 | 159 | 8 | 68 | 312 | 202 | 452 | 5.19e-12 | 67.0 |
| MS.gene24540.t1 | MTR_2g078760 | 31.977 | 172 | 93 | 9 | 115 | 278 | 134 | 289 | 5.52e-12 | 65.9 |
| MS.gene24540.t1 | MTR_4g116420 | 23.466 | 277 | 156 | 8 | 67 | 332 | 123 | 354 | 1.06e-11 | 65.9 |
| MS.gene24540.t1 | MTR_7g100240 | 26.792 | 265 | 137 | 10 | 53 | 288 | 56 | 292 | 2.76e-11 | 64.3 |
| MS.gene24540.t1 | MTR_3g032590 | 29.565 | 230 | 103 | 10 | 163 | 343 | 154 | 373 | 6.31e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24540.t1 | AT5G26010 | 53.529 | 340 | 140 | 8 | 1 | 333 | 1 | 329 | 9.16e-106 | 313 |
| MS.gene24540.t1 | AT4G32950 | 48.980 | 343 | 145 | 7 | 1 | 333 | 1 | 323 | 6.19e-101 | 301 |
| MS.gene24540.t1 | AT5G36250 | 45.758 | 330 | 152 | 5 | 33 | 335 | 62 | 391 | 2.70e-99 | 301 |
| MS.gene24540.t1 | AT1G16220 | 48.598 | 321 | 143 | 5 | 31 | 329 | 57 | 377 | 3.61e-98 | 299 |
| MS.gene24540.t1 | AT1G79630 | 43.750 | 368 | 157 | 5 | 11 | 336 | 48 | 407 | 7.79e-98 | 299 |
| MS.gene24540.t1 | AT1G03590 | 46.110 | 347 | 167 | 4 | 1 | 331 | 23 | 365 | 1.21e-97 | 297 |
| MS.gene24540.t1 | AT1G79630 | 43.750 | 368 | 157 | 5 | 11 | 336 | 44 | 403 | 1.29e-97 | 298 |
| MS.gene24540.t1 | AT5G36250 | 44.186 | 344 | 151 | 6 | 33 | 335 | 62 | 405 | 2.77e-95 | 291 |
| MS.gene24540.t1 | AT4G03415 | 47.712 | 306 | 145 | 5 | 41 | 331 | 70 | 375 | 3.33e-91 | 281 |
| MS.gene24540.t1 | AT4G03415 | 47.712 | 306 | 145 | 5 | 41 | 331 | 70 | 375 | 3.33e-91 | 281 |
| MS.gene24540.t1 | AT4G03415 | 47.712 | 306 | 145 | 5 | 41 | 331 | 70 | 375 | 3.33e-91 | 281 |
| MS.gene24540.t1 | AT3G02750 | 45.029 | 342 | 147 | 4 | 33 | 334 | 59 | 399 | 8.24e-91 | 280 |
| MS.gene24540.t1 | AT3G02750 | 45.029 | 342 | 147 | 4 | 33 | 334 | 59 | 399 | 8.24e-91 | 280 |
| MS.gene24540.t1 | AT1G79630 | 46.006 | 313 | 128 | 3 | 65 | 336 | 25 | 337 | 2.27e-89 | 275 |
| MS.gene24540.t1 | AT1G79630 | 46.006 | 313 | 128 | 3 | 65 | 336 | 25 | 337 | 2.27e-89 | 275 |
| MS.gene24540.t1 | AT5G01700 | 44.816 | 299 | 153 | 4 | 44 | 336 | 4 | 296 | 1.62e-86 | 264 |
| MS.gene24540.t1 | AT5G01700 | 44.554 | 303 | 156 | 4 | 40 | 336 | 49 | 345 | 8.61e-86 | 264 |
| MS.gene24540.t1 | AT3G02750 | 40.849 | 377 | 147 | 5 | 33 | 334 | 59 | 434 | 2.42e-83 | 262 |
| MS.gene24540.t1 | AT3G05640 | 44.068 | 295 | 156 | 5 | 38 | 329 | 62 | 350 | 9.19e-81 | 250 |
| MS.gene24540.t1 | AT3G05640 | 44.068 | 295 | 156 | 5 | 38 | 329 | 62 | 350 | 9.19e-81 | 250 |
| MS.gene24540.t1 | AT3G05640 | 44.068 | 295 | 156 | 5 | 38 | 329 | 62 | 350 | 9.19e-81 | 250 |
| MS.gene24540.t1 | AT1G79630 | 55.814 | 215 | 94 | 1 | 116 | 329 | 76 | 290 | 1.06e-80 | 251 |
| MS.gene24540.t1 | AT1G79630 | 55.814 | 215 | 94 | 1 | 116 | 329 | 76 | 290 | 1.06e-80 | 251 |
| MS.gene24540.t1 | AT1G79630 | 55.814 | 215 | 94 | 1 | 116 | 329 | 76 | 290 | 1.06e-80 | 251 |
| MS.gene24540.t1 | AT1G79630 | 55.814 | 215 | 94 | 1 | 116 | 329 | 76 | 290 | 1.06e-80 | 251 |
| MS.gene24540.t1 | AT5G27930 | 42.321 | 293 | 166 | 3 | 38 | 327 | 61 | 353 | 2.85e-78 | 244 |
| MS.gene24540.t1 | AT5G27930 | 42.321 | 293 | 166 | 3 | 38 | 327 | 61 | 353 | 2.85e-78 | 244 |
| MS.gene24540.t1 | AT4G32950 | 46.996 | 283 | 122 | 6 | 1 | 275 | 1 | 263 | 2.33e-76 | 236 |
| MS.gene24540.t1 | AT5G36250 | 43.956 | 273 | 126 | 5 | 33 | 278 | 62 | 334 | 5.67e-75 | 235 |
| MS.gene24540.t1 | AT3G16800 | 38.926 | 298 | 172 | 4 | 35 | 329 | 59 | 349 | 3.05e-73 | 231 |
| MS.gene24540.t1 | AT3G16800 | 38.926 | 298 | 172 | 4 | 35 | 329 | 59 | 349 | 3.05e-73 | 231 |
| MS.gene24540.t1 | AT3G16800 | 38.926 | 298 | 172 | 4 | 35 | 329 | 59 | 349 | 3.05e-73 | 231 |
| MS.gene24540.t1 | AT3G16800 | 38.314 | 261 | 152 | 3 | 71 | 329 | 1 | 254 | 8.67e-63 | 201 |
| MS.gene24540.t1 | AT3G16800 | 38.314 | 261 | 152 | 3 | 71 | 329 | 1 | 254 | 8.67e-63 | 201 |
| MS.gene24540.t1 | AT5G27930 | 41.803 | 244 | 139 | 3 | 35 | 275 | 58 | 301 | 3.32e-62 | 201 |
| MS.gene24540.t1 | AT2G20050 | 30.645 | 310 | 167 | 8 | 39 | 324 | 108 | 393 | 9.63e-34 | 132 |
| MS.gene24540.t1 | AT2G20050 | 30.645 | 310 | 167 | 8 | 39 | 324 | 108 | 393 | 1.06e-33 | 132 |
| MS.gene24540.t1 | AT3G16800 | 36.310 | 168 | 97 | 4 | 35 | 199 | 59 | 219 | 1.03e-29 | 114 |
| MS.gene24540.t1 | AT3G06270 | 26.962 | 293 | 171 | 7 | 51 | 324 | 70 | 338 | 7.56e-28 | 112 |
| MS.gene24540.t1 | AT5G10740 | 31.321 | 265 | 134 | 8 | 67 | 329 | 63 | 281 | 1.20e-26 | 108 |
| MS.gene24540.t1 | AT5G10740 | 31.321 | 265 | 134 | 8 | 67 | 329 | 63 | 281 | 1.20e-26 | 108 |
| MS.gene24540.t1 | AT4G31750 | 36.036 | 222 | 112 | 7 | 114 | 327 | 81 | 280 | 1.37e-26 | 107 |
| MS.gene24540.t1 | AT4G31750 | 36.036 | 222 | 112 | 7 | 114 | 327 | 81 | 280 | 1.37e-26 | 107 |
| MS.gene24540.t1 | AT4G31750 | 36.036 | 222 | 112 | 7 | 114 | 327 | 81 | 280 | 2.28e-26 | 107 |
| MS.gene24540.t1 | AT5G24940 | 31.780 | 236 | 121 | 6 | 68 | 302 | 64 | 260 | 1.66e-25 | 106 |
| MS.gene24540.t1 | AT1G07430 | 31.541 | 279 | 157 | 11 | 22 | 290 | 102 | 356 | 4.09e-24 | 102 |
| MS.gene24540.t1 | AT5G59220 | 31.970 | 269 | 126 | 9 | 41 | 290 | 114 | 344 | 9.84e-24 | 101 |
| MS.gene24540.t1 | AT1G43900 | 32.231 | 242 | 123 | 7 | 67 | 307 | 153 | 354 | 1.20e-22 | 97.8 |
| MS.gene24540.t1 | AT2G20630 | 29.577 | 284 | 134 | 13 | 65 | 337 | 60 | 288 | 9.37e-20 | 88.6 |
| MS.gene24540.t1 | AT2G20630 | 30.159 | 252 | 120 | 10 | 65 | 307 | 60 | 264 | 2.55e-19 | 87.0 |
| MS.gene24540.t1 | AT3G11410 | 30.483 | 269 | 127 | 11 | 46 | 290 | 112 | 344 | 3.47e-19 | 88.2 |
| MS.gene24540.t1 | AT4G28400 | 29.730 | 259 | 125 | 10 | 62 | 311 | 40 | 250 | 4.06e-19 | 85.9 |
| MS.gene24540.t1 | AT4G28400 | 29.730 | 259 | 125 | 10 | 62 | 311 | 62 | 272 | 6.63e-19 | 85.9 |
| MS.gene24540.t1 | AT5G53140 | 29.412 | 272 | 134 | 10 | 70 | 334 | 134 | 354 | 1.40e-18 | 86.7 |
| MS.gene24540.t1 | AT5G53140 | 29.412 | 272 | 134 | 10 | 70 | 334 | 134 | 354 | 1.40e-18 | 86.7 |
| MS.gene24540.t1 | AT1G72770 | 30.638 | 235 | 126 | 7 | 66 | 287 | 236 | 446 | 2.10e-18 | 86.7 |
| MS.gene24540.t1 | AT1G72770 | 30.638 | 235 | 126 | 7 | 66 | 287 | 236 | 446 | 2.10e-18 | 86.7 |
| MS.gene24540.t1 | AT1G72770 | 30.638 | 235 | 126 | 7 | 66 | 287 | 236 | 446 | 2.10e-18 | 86.7 |
| MS.gene24540.t1 | AT2G29380 | 28.906 | 256 | 153 | 10 | 41 | 290 | 80 | 312 | 1.26e-17 | 83.2 |
| MS.gene24540.t1 | AT2G34740 | 31.955 | 266 | 131 | 13 | 67 | 329 | 118 | 336 | 1.81e-17 | 82.8 |
| MS.gene24540.t1 | AT1G67820 | 29.766 | 299 | 170 | 9 | 41 | 337 | 87 | 347 | 6.61e-17 | 81.6 |
| MS.gene24540.t1 | AT2G33700 | 29.787 | 282 | 138 | 12 | 66 | 336 | 121 | 353 | 8.29e-17 | 81.3 |
| MS.gene24540.t1 | AT1G67820 | 29.766 | 299 | 170 | 9 | 41 | 337 | 123 | 383 | 9.82e-17 | 81.3 |
| MS.gene24540.t1 | AT1G78200 | 32.804 | 189 | 97 | 5 | 126 | 305 | 54 | 221 | 9.86e-17 | 79.0 |
| MS.gene24540.t1 | AT1G78200 | 32.804 | 189 | 97 | 5 | 126 | 305 | 54 | 221 | 9.86e-17 | 79.0 |
| MS.gene24540.t1 | AT2G25620 | 28.777 | 278 | 142 | 11 | 67 | 332 | 127 | 360 | 1.46e-16 | 80.5 |
| MS.gene24540.t1 | AT2G25620 | 28.777 | 278 | 142 | 11 | 67 | 332 | 127 | 360 | 1.46e-16 | 80.5 |
| MS.gene24540.t1 | AT1G78200 | 33.516 | 182 | 105 | 5 | 126 | 305 | 99 | 266 | 1.46e-16 | 79.3 |
| MS.gene24540.t1 | AT1G78200 | 33.516 | 182 | 105 | 5 | 126 | 305 | 99 | 266 | 1.46e-16 | 79.3 |
| MS.gene24540.t1 | AT1G78200 | 33.516 | 182 | 105 | 5 | 126 | 305 | 99 | 266 | 1.46e-16 | 79.3 |
| MS.gene24540.t1 | AT1G22280 | 31.250 | 256 | 123 | 14 | 59 | 305 | 59 | 270 | 1.70e-16 | 79.0 |
| MS.gene24540.t1 | AT5G57050 | 30.455 | 220 | 125 | 6 | 68 | 287 | 120 | 311 | 1.78e-16 | 80.1 |
| MS.gene24540.t1 | AT5G57050 | 30.455 | 220 | 125 | 6 | 68 | 287 | 160 | 351 | 2.26e-16 | 80.1 |
| MS.gene24540.t1 | AT4G26080 | 31.336 | 217 | 117 | 8 | 68 | 283 | 172 | 357 | 2.30e-16 | 80.1 |
| MS.gene24540.t1 | AT5G51760 | 30.000 | 240 | 132 | 7 | 68 | 295 | 114 | 329 | 2.74e-16 | 79.7 |
| MS.gene24540.t1 | AT5G51760 | 30.000 | 240 | 132 | 7 | 68 | 295 | 144 | 359 | 3.19e-16 | 79.7 |
| MS.gene24540.t1 | AT2G40180 | 29.368 | 269 | 142 | 10 | 28 | 288 | 118 | 346 | 3.47e-16 | 79.3 |
| MS.gene24540.t1 | AT3G62260 | 28.879 | 232 | 126 | 8 | 64 | 288 | 23 | 222 | 7.08e-16 | 77.4 |
| MS.gene24540.t1 | AT1G17550 | 30.045 | 223 | 132 | 6 | 68 | 283 | 237 | 442 | 1.42e-15 | 78.2 |
| MS.gene24540.t1 | AT1G17550 | 30.045 | 223 | 132 | 6 | 68 | 283 | 237 | 442 | 1.42e-15 | 78.2 |
| MS.gene24540.t1 | AT3G62260 | 28.879 | 232 | 126 | 8 | 64 | 288 | 113 | 312 | 1.71e-15 | 77.4 |
| MS.gene24540.t1 | AT3G62260 | 28.879 | 232 | 126 | 8 | 64 | 288 | 112 | 311 | 1.90e-15 | 77.0 |
| MS.gene24540.t1 | AT1G18030 | 29.437 | 231 | 106 | 5 | 67 | 278 | 108 | 300 | 6.65e-15 | 74.7 |
| MS.gene24540.t1 | AT3G51470 | 27.426 | 237 | 126 | 8 | 57 | 288 | 51 | 246 | 7.59e-15 | 74.7 |
| MS.gene24540.t1 | AT1G18030 | 29.060 | 234 | 123 | 5 | 67 | 288 | 108 | 310 | 7.61e-15 | 75.1 |
| MS.gene24540.t1 | AT3G51470 | 27.848 | 237 | 125 | 9 | 57 | 288 | 95 | 290 | 8.92e-15 | 75.1 |
| MS.gene24540.t1 | AT1G07160 | 27.891 | 294 | 170 | 10 | 40 | 328 | 124 | 380 | 1.54e-14 | 74.3 |
| MS.gene24540.t1 | AT3G17250 | 26.522 | 230 | 131 | 8 | 67 | 288 | 157 | 356 | 2.65e-14 | 73.9 |
| MS.gene24540.t1 | AT1G34750 | 28.866 | 194 | 95 | 7 | 126 | 305 | 101 | 265 | 2.74e-14 | 72.8 |
| MS.gene24540.t1 | AT1G34750 | 28.866 | 194 | 95 | 7 | 126 | 305 | 101 | 265 | 2.74e-14 | 72.8 |
| MS.gene24540.t1 | AT1G34750 | 28.866 | 194 | 95 | 7 | 126 | 305 | 101 | 265 | 2.74e-14 | 72.8 |
| MS.gene24540.t1 | AT2G30020 | 28.287 | 251 | 138 | 9 | 40 | 287 | 141 | 352 | 3.14e-14 | 73.6 |
| MS.gene24540.t1 | AT1G22280 | 30.279 | 251 | 126 | 14 | 59 | 305 | 59 | 264 | 4.25e-14 | 72.0 |
| MS.gene24540.t1 | AT2G25070 | 26.804 | 291 | 158 | 11 | 32 | 288 | 18 | 287 | 4.57e-14 | 72.8 |
| MS.gene24540.t1 | AT2G25070 | 26.804 | 291 | 158 | 11 | 32 | 288 | 18 | 287 | 4.57e-14 | 72.8 |
| MS.gene24540.t1 | AT4G28400 | 30.088 | 226 | 101 | 10 | 62 | 278 | 62 | 239 | 2.16e-13 | 69.7 |
| MS.gene24540.t1 | AT3G15260 | 29.231 | 195 | 102 | 8 | 125 | 307 | 104 | 274 | 2.95e-12 | 66.6 |
| MS.gene24540.t1 | AT3G15260 | 29.231 | 195 | 102 | 8 | 125 | 307 | 104 | 274 | 2.95e-12 | 66.6 |
| MS.gene24540.t1 | AT3G16560 | 24.739 | 287 | 163 | 9 | 68 | 312 | 175 | 450 | 3.46e-12 | 67.8 |
| MS.gene24540.t1 | AT4G27800 | 31.795 | 195 | 87 | 7 | 126 | 288 | 131 | 311 | 3.65e-12 | 67.0 |
| MS.gene24540.t1 | AT3G16560 | 24.739 | 287 | 163 | 9 | 68 | 312 | 175 | 450 | 4.01e-12 | 67.4 |
| MS.gene24540.t1 | AT3G16560 | 24.739 | 287 | 163 | 9 | 68 | 312 | 175 | 450 | 4.01e-12 | 67.4 |
| MS.gene24540.t1 | AT3G16560 | 24.739 | 287 | 163 | 9 | 68 | 312 | 175 | 450 | 4.01e-12 | 67.4 |
| MS.gene24540.t1 | AT4G27800 | 31.795 | 195 | 87 | 7 | 126 | 288 | 131 | 311 | 4.12e-12 | 66.6 |
| MS.gene24540.t1 | AT4G27800 | 31.795 | 195 | 87 | 7 | 126 | 288 | 131 | 311 | 6.36e-12 | 66.6 |
| MS.gene24540.t1 | AT1G48040 | 28.070 | 228 | 128 | 9 | 67 | 288 | 115 | 312 | 7.30e-12 | 66.2 |
| MS.gene24540.t1 | AT3G55050 | 25.862 | 290 | 159 | 13 | 50 | 312 | 68 | 328 | 2.46e-11 | 64.7 |
| MS.gene24540.t1 | AT3G55050 | 25.862 | 290 | 159 | 13 | 50 | 312 | 68 | 328 | 2.46e-11 | 64.7 |
| MS.gene24540.t1 | AT2G34740 | 31.193 | 218 | 108 | 11 | 67 | 282 | 114 | 291 | 3.93e-11 | 63.5 |
| MS.gene24540.t1 | AT2G34740 | 31.193 | 218 | 108 | 11 | 67 | 282 | 132 | 309 | 4.32e-11 | 63.5 |
Find 75 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGTTGTGTTTATGCGTTAA+AGG | 0.236530 | 1.2:-5968265 | MS.gene24540:CDS |
| TTATTGCTACACCAGATATT+TGG | 0.238563 | 1.2:-5968143 | MS.gene24540:CDS |
| ACCACAAAACTTGGAGTATA+TGG | 0.271089 | 1.2:-5967816 | MS.gene24540:CDS |
| AAAGTCTCTTAGTCTCATTT+TGG | 0.297664 | 1.2:+5970093 | None:intergenic |
| CACTTGCAAGAACAATAAAT+TGG | 0.301398 | 1.2:+5968097 | None:intergenic |
| TATATGGACAGTGGAAAATT+AGG | 0.305057 | 1.2:-5967800 | MS.gene24540:CDS |
| CAGGCGAAGCAAAGAGAATA+AGG | 0.327044 | 1.2:-5968296 | MS.gene24540:CDS |
| TCTCCTCAAGAGCATTCTTT+TGG | 0.348401 | 1.2:+5969306 | None:intergenic |
| TCTTGGAGCTTTCAATGTAA+TGG | 0.363239 | 1.2:-5969207 | MS.gene24540:CDS |
| CTAGCCATGTCTCGAGCTTT+CGG | 0.377337 | 1.2:-5968192 | MS.gene24540:CDS |
| GGTGACTCAAGAGCAATATT+AGG | 0.378928 | 1.2:-5969001 | MS.gene24540:CDS |
| AGATGGAAAGAAGCTATTCT+TGG | 0.379447 | 1.2:-5969224 | MS.gene24540:CDS |
| AAACGGTGATACCAAATATC+TGG | 0.385349 | 1.2:+5968132 | None:intergenic |
| TTGACCACTGATTTGAAGCC+TGG | 0.390238 | 1.2:-5968944 | MS.gene24540:CDS |
| GTGGTTTCTTCTGCAGGAAA+TGG | 0.397763 | 1.2:+5967834 | None:intergenic |
| AGTACCTTGTTTAGAGTAAA+CGG | 0.400838 | 1.2:+5970067 | None:intergenic |
| ATTGGACACTTGATGTTAAA+CGG | 0.415778 | 1.2:+5968115 | None:intergenic |
| TAGGCCAGGGTAGTTCTCAT+TGG | 0.416310 | 1.2:+5968212 | None:intergenic |
| TTTCAAACAACTATCTAAGA+TGG | 0.418400 | 1.2:-5969241 | MS.gene24540:CDS |
| CAAATCAGTGGTCAATTGAA+TGG | 0.418841 | 1.2:+5968952 | None:intergenic |
| TTACTCTAAACAAGGTACTA+AGG | 0.430230 | 1.2:-5970063 | MS.gene24540:CDS |
| AACCACATGTCCAACGAGTA+TGG | 0.432459 | 1.2:-5968239 | MS.gene24540:CDS |
| GTTGCATCTTCAGAGATTCA+TGG | 0.433464 | 1.2:-5970167 | MS.gene24540:CDS |
| TTTATTGTTCTTGCAAGTGA+TGG | 0.439321 | 1.2:-5968093 | MS.gene24540:CDS |
| GCAGAAGAAACCACAAAACT+TGG | 0.461758 | 1.2:-5967825 | MS.gene24540:CDS |
| CTTCTTTGCCCATGCAGCTG+TGG | 0.475385 | 1.2:+5967895 | None:intergenic |
| CATTCTCATCATGAACTTGA+GGG | 0.480118 | 1.2:+5970141 | None:intergenic |
| AAGGATTATGGGATGAAAGA+TGG | 0.481239 | 1.2:-5969419 | MS.gene24540:CDS |
| AGAATCTTACAAGGCAATCC+AGG | 0.481837 | 1.2:+5968926 | None:intergenic |
| AGGCCAGGGTAGTTCTCATT+GGG | 0.484559 | 1.2:+5968213 | None:intergenic |
| TTATTGTTCTTGCAAGTGAT+GGG | 0.484730 | 1.2:-5968092 | MS.gene24540:CDS |
| GGAAGCAGCCACAGCTGCAT+GGG | 0.485485 | 1.2:-5967903 | MS.gene24540:CDS |
| GCTCGAGACATGGCTAGGCC+AGG | 0.488145 | 1.2:+5968198 | None:intergenic |
| GGAAGCTGCAAGGGCAGTGG+TGG | 0.495822 | 1.2:-5967924 | MS.gene24540:CDS |
| GAGTGAAGAGGAAGCTGCAA+GGG | 0.496594 | 1.2:-5967933 | MS.gene24540:CDS |
| CAAAGAAGTTTCCTTCCTCT+AGG | 0.507704 | 1.2:-5967880 | MS.gene24540:CDS |
| GGTGAAGAGAAGCAGCATCT+TGG | 0.517349 | 1.2:+5970033 | None:intergenic |
| AGATGCTGCTTCTCTTCACC+AGG | 0.518124 | 1.2:-5970030 | MS.gene24540:intron |
| TGCTGTAGTTGTCATAAGAC+AGG | 0.527202 | 1.2:-5969132 | MS.gene24540:intron |
| GAGCCAAAAGAATGCTCTTG+AGG | 0.530104 | 1.2:-5969309 | MS.gene24540:CDS |
| TGGAAGCAGCCACAGCTGCA+TGG | 0.533129 | 1.2:-5967904 | MS.gene24540:CDS |
| AATCTAGATTGTTCTTGTAG+TGG | 0.537196 | 1.2:-5969161 | MS.gene24540:CDS |
| TACTCTAAACAAGGTACTAA+GGG | 0.539094 | 1.2:-5970062 | MS.gene24540:CDS |
| ACATTCTCATCATGAACTTG+AGG | 0.551482 | 1.2:+5970140 | None:intergenic |
| GGTCTTATCATAGTTAACCT+TGG | 0.561803 | 1.2:-5969022 | MS.gene24540:CDS |
| AAAGAAGTTTCCTTCCTCTA+GGG | 0.562358 | 1.2:-5967879 | MS.gene24540:CDS |
| AACCATACTCGTTGGACATG+TGG | 0.563398 | 1.2:+5968237 | None:intergenic |
| CATTGGGCAACCATACTCGT+TGG | 0.565790 | 1.2:+5968229 | None:intergenic |
| CGAAAGCTCGAGACATGGCT+AGG | 0.567459 | 1.2:+5968193 | None:intergenic |
| TTTCAATGTAATGGATGAAG+AGG | 0.572129 | 1.2:-5969198 | MS.gene24540:CDS |
| CATGATATTTGAAGCAAGCA+AGG | 0.574257 | 1.2:-5970117 | MS.gene24540:CDS |
| AGAGGAAGCTGCAAGGGCAG+TGG | 0.574488 | 1.2:-5967927 | MS.gene24540:CDS |
| CTCGAGACATGGCTAGGCCA+GGG | 0.576527 | 1.2:+5968199 | None:intergenic |
| TTGCCCAATGAGAACTACCC+TGG | 0.599999 | 1.2:-5968216 | MS.gene24540:CDS |
| CAATCATCTACCCTAGAGGA+AGG | 0.600898 | 1.2:+5967869 | None:intergenic |
| ATGAATCTCTGAAGATGCAA+CGG | 0.607268 | 1.2:+5970169 | None:intergenic |
| AGAGTGAAGAGGAAGCTGCA+AGG | 0.613435 | 1.2:-5967934 | MS.gene24540:CDS |
| TGCTCCGTTTACTCTAAACA+AGG | 0.613627 | 1.2:-5970071 | MS.gene24540:CDS |
| TATTGTTCTTGCAAGTGATG+GGG | 0.615238 | 1.2:-5968091 | MS.gene24540:intron |
| ATCTCCGAAAGCTCGAGACA+TGG | 0.616410 | 1.2:+5968188 | None:intergenic |
| GAACAATATAAACAGGGTGA+AGG | 0.617168 | 1.2:-5969043 | MS.gene24540:intron |
| TGTGGTGTTTATGATGGACA+TGG | 0.621779 | 1.2:-5969389 | MS.gene24540:CDS |
| GGTTGCATCAATTGTGTGGA+TGG | 0.622975 | 1.2:-5967960 | MS.gene24540:CDS |
| CAATCCAGGCTTCAAATCAG+TGG | 0.634673 | 1.2:+5968940 | None:intergenic |
| GATTTCATACTTAAAGACCA+TGG | 0.635074 | 1.2:-5968168 | MS.gene24540:CDS |
| GTGGATGGTAGAGAGTGAAG+AGG | 0.644994 | 1.2:-5967945 | MS.gene24540:CDS |
| AAGAGGTTGCATCAATTGTG+TGG | 0.658363 | 1.2:-5967964 | MS.gene24540:CDS |
| AAGAGAATAAGGAGTTGCAA+CGG | 0.664540 | 1.2:-5968285 | MS.gene24540:CDS |
| AACTTGGAGTATATGGACAG+TGG | 0.675658 | 1.2:-5967809 | MS.gene24540:CDS |
| GGATGTACTAAGTAATGAAG+AGG | 0.676441 | 1.2:-5967981 | MS.gene24540:CDS |
| ATATTGCTCTTGAGTCACCA+AGG | 0.689464 | 1.2:+5969005 | None:intergenic |
| CTGCAGGAAATGGCAAACCA+CGG | 0.691531 | 1.2:+5967844 | None:intergenic |
| GGTGCAATCATCTACCCTAG+AGG | 0.703711 | 1.2:+5967865 | None:intergenic |
| CTGGTGTAGCAATAACACCA+TGG | 0.708013 | 1.2:+5968151 | None:intergenic |
| TAGGGTAGATGATTGCACCG+TGG | 0.761662 | 1.2:-5967861 | MS.gene24540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTAAAATATTATTATATT+TGG | + | chr1.2:5969438-5969457 | None:intergenic | 0.0% |
| !! | AAAAAAAAAAAAAACTTTGA+TGG | - | chr1.2:5968288-5968307 | MS.gene24540:CDS | 10.0% |
| !! | TATCTTAAATTACTAAAAAA+AGG | + | chr1.2:5968338-5968357 | None:intergenic | 10.0% |
| !!! | AATTAAATTTTAAACATTCA+CGG | + | chr1.2:5969523-5969542 | None:intergenic | 10.0% |
| !!! | TCATTTTCTAAAAAAAAAAA+AGG | - | chr1.2:5969370-5969389 | MS.gene24540:CDS | 10.0% |
| !! | TATTTGTATCTAAACTAAAT+TGG | - | chr1.2:5969658-5969677 | MS.gene24540:intron | 15.0% |
| !!! | AATTTAAGATATCATGATTA+TGG | - | chr1.2:5968347-5968366 | MS.gene24540:intron | 15.0% |
| !!! | TTTTCTAAAAAAAAAAAAGG+TGG | - | chr1.2:5969373-5969392 | MS.gene24540:CDS | 15.0% |
| !! | AAGTACATGACTTTATAAAA+AGG | + | chr1.2:5968470-5968489 | None:intergenic | 20.0% |
| !! | ATAACAAGAACAATATAAAC+AGG | - | chr1.2:5968931-5968950 | MS.gene24540:intron | 20.0% |
| !! | ATATTTGGATTAAAATACGT+CGG | + | chr1.2:5969423-5969442 | None:intergenic | 20.0% |
| !! | GAGATTAATACAACAAAAAA+TGG | - | chr1.2:5968694-5968713 | MS.gene24540:intron | 20.0% |
| !! | TAACAAGAACAATATAAACA+GGG | - | chr1.2:5968932-5968951 | MS.gene24540:intron | 20.0% |
| !! | TGTTGTGATCTTTAATATTA+AGG | - | chr1.2:5968190-5968209 | MS.gene24540:CDS | 20.0% |
| !! | TTAAGGAAAAAGAAACAAAA+GGG | + | chr1.2:5968542-5968561 | None:intergenic | 20.0% |
| !! | TTCATATAACTGTTAAACTA+AGG | + | chr1.2:5969294-5969313 | None:intergenic | 20.0% |
| !! | TTTAAGGAAAAAGAAACAAA+AGG | + | chr1.2:5968543-5968562 | None:intergenic | 20.0% |
| !!! | AATGGCTTTATCATTATTTA+TGG | - | chr1.2:5969955-5969974 | MS.gene24540:intron | 20.0% |
| !!! | AATTTGAAGATAATTTTGCA+TGG | - | chr1.2:5968132-5968151 | MS.gene24540:CDS | 20.0% |
| !!! | TAACCTTTAAATAATTTGCA+TGG | - | chr1.2:5967993-5968012 | MS.gene24540:intron | 20.0% |
| !!! | TATGGATATTTTTTGCTTAT+AGG | - | chr1.2:5969973-5969992 | MS.gene24540:intron | 20.0% |
| !!! | TTTGTTTCTTTTTCCTTAAA+AGG | - | chr1.2:5968543-5968562 | MS.gene24540:intron | 20.0% |
| !!! | TTTTTCCTTAAAAGGATTAT+GGG | - | chr1.2:5968551-5968570 | MS.gene24540:intron | 20.0% |
| ! | TTTATGAGAAGAATCTTACA+AGG | + | chr1.2:5969067-5969086 | None:intergenic | 25.0% |
| ! | TTTCAAACAACTATCTAAGA+TGG | - | chr1.2:5968740-5968759 | MS.gene24540:intron | 25.0% |
| !! | CTTTTTCCTTAAAAGGATTA+TGG | - | chr1.2:5968550-5968569 | MS.gene24540:intron | 25.0% |
| !!! | ATATTTTTTGCTTATAGGTG+TGG | - | chr1.2:5969978-5969997 | MS.gene24540:intron | 25.0% |
| !!! | CTTTTCAATTATTGGTTTGA+CGG | - | chr1.2:5969101-5969120 | MS.gene24540:intron | 25.0% |
| !!! | TATTTTTTGCTTATAGGTGT+GGG | - | chr1.2:5969979-5969998 | MS.gene24540:intron | 25.0% |
| AACTGTTAAACTAAGGTGTA+TGG | + | chr1.2:5969287-5969306 | None:intergenic | 30.0% | |
| AATCTAGATTGTTCTTGTAG+TGG | - | chr1.2:5968820-5968839 | MS.gene24540:intron | 30.0% | |
| AGAAACAAAAGGGAGATATA+TGG | + | chr1.2:5968532-5968551 | None:intergenic | 30.0% | |
| ATAATTGAAAAGAAGCTGCA+TGG | + | chr1.2:5969093-5969112 | None:intergenic | 30.0% | |
| ATGAGAGAATTAAAACCTTG+TGG | + | chr1.2:5968019-5968038 | None:intergenic | 30.0% | |
| ATTGGACACTTGATGTTAAA+CGG | + | chr1.2:5969869-5969888 | None:intergenic | 30.0% | |
| CAAATAAGAGACTTCTAGAT+AGG | - | chr1.2:5969343-5969362 | MS.gene24540:CDS | 30.0% | |
| CAATCTGAGTCAAGATATTA+AGG | + | chr1.2:5968437-5968456 | None:intergenic | 30.0% | |
| CACTTGCAAGAACAATAAAT+TGG | + | chr1.2:5969887-5969906 | None:intergenic | 30.0% | |
| CTTGCATACAACAATTTCAA+TGG | - | chr1.2:5969937-5969956 | MS.gene24540:intron | 30.0% | |
| GATTTCATACTTAAAGACCA+TGG | - | chr1.2:5969813-5969832 | MS.gene24540:intron | 30.0% | |
| TAAACGTCAATAATGACACA+GGG | - | chr1.2:5969493-5969512 | MS.gene24540:intron | 30.0% | |
| TATATGGACAGTGGAAAATT+AGG | - | chr1.2:5970181-5970200 | MS.gene24540:CDS | 30.0% | |
| TCTAAACTAAATTGGAATGC+AGG | - | chr1.2:5969666-5969685 | MS.gene24540:intron | 30.0% | |
| TCTTCAAATTCTACACAACT+TGG | + | chr1.2:5968122-5968141 | None:intergenic | 30.0% | |
| TGGCCATGCAAATTATTTAA+AGG | + | chr1.2:5967999-5968018 | None:intergenic | 30.0% | |
| TTAAACGTCAATAATGACAC+AGG | - | chr1.2:5969492-5969511 | MS.gene24540:intron | 30.0% | |
| TTATTGCTACACCAGATATT+TGG | - | chr1.2:5969838-5969857 | MS.gene24540:intron | 30.0% | |
| TTATTGTTCTTGCAAGTGAT+GGG | - | chr1.2:5969889-5969908 | MS.gene24540:intron | 30.0% | |
| TTTATTGTTCTTGCAAGTGA+TGG | - | chr1.2:5969888-5969907 | MS.gene24540:intron | 30.0% | |
| ! | AAAGTCTCTTAGTCTCATTT+TGG | + | chr1.2:5967891-5967910 | None:intergenic | 30.0% |
| ! | AGTACCTTGTTTAGAGTAAA+CGG | + | chr1.2:5967917-5967936 | None:intergenic | 30.0% |
| ! | TACTCTAAACAAGGTACTAA+GGG | - | chr1.2:5967919-5967938 | MS.gene24540:CDS | 30.0% |
| ! | TGCAGCTTCTTTTCAATTAT+TGG | - | chr1.2:5969093-5969112 | MS.gene24540:intron | 30.0% |
| ! | TGTGTCATTATTGACGTTTA+AGG | + | chr1.2:5969493-5969512 | None:intergenic | 30.0% |
| ! | TTACTCTAAACAAGGTACTA+AGG | - | chr1.2:5967918-5967937 | MS.gene24540:CDS | 30.0% |
| ! | TTCATCCCATAATCCTTTTA+AGG | + | chr1.2:5968559-5968578 | None:intergenic | 30.0% |
| !! | TATGATGGACATGGAAAAAA+TGG | - | chr1.2:5968601-5968620 | MS.gene24540:intron | 30.0% |
| !! | TTTCAATGTAATGGATGAAG+AGG | - | chr1.2:5968783-5968802 | MS.gene24540:intron | 30.0% |
| !!! | ACAAGGTTTTAATTCTCTCA+TGG | - | chr1.2:5968018-5968037 | MS.gene24540:intron | 30.0% |
| !!! | TGGCTTTTAGTTTTTCATCT+TGG | + | chr1.2:5969012-5969031 | None:intergenic | 30.0% |
| AAACGGTGATACCAAATATC+TGG | + | chr1.2:5969852-5969871 | None:intergenic | 35.0% | |
| AAAGAAGTTTCCTTCCTCTA+GGG | - | chr1.2:5970102-5970121 | MS.gene24540:CDS | 35.0% | |
| AAGAGAATAAGGAGTTGCAA+CGG | - | chr1.2:5969696-5969715 | MS.gene24540:intron | 35.0% | |
| AAGGATTATGGGATGAAAGA+TGG | - | chr1.2:5968562-5968581 | MS.gene24540:intron | 35.0% | |
| ACATTCTCATCATGAACTTG+AGG | + | chr1.2:5967844-5967863 | None:intergenic | 35.0% | |
| ACCACAAAACTTGGAGTATA+TGG | - | chr1.2:5970165-5970184 | MS.gene24540:CDS | 35.0% | |
| AGATGGAAAGAAGCTATTCT+TGG | - | chr1.2:5968757-5968776 | MS.gene24540:intron | 35.0% | |
| ATAAGAGACTTCTAGATAGG+TGG | - | chr1.2:5969346-5969365 | MS.gene24540:CDS | 35.0% | |
| ATGGTAATCACGAACAAATG+TGG | - | chr1.2:5968366-5968385 | MS.gene24540:intron | 35.0% | |
| CAAATCAGTGGTCAATTGAA+TGG | + | chr1.2:5969032-5969051 | None:intergenic | 35.0% | |
| CATTCTCATCATGAACTTGA+GGG | + | chr1.2:5967843-5967862 | None:intergenic | 35.0% | |
| GAACAATATAAACAGGGTGA+AGG | - | chr1.2:5968938-5968957 | MS.gene24540:CDS | 35.0% | |
| GGATGTACTAAGTAATGAAG+AGG | - | chr1.2:5970000-5970019 | MS.gene24540:intron | 35.0% | |
| TATTGTTCTTGCAAGTGATG+GGG | - | chr1.2:5969890-5969909 | MS.gene24540:intron | 35.0% | |
| TCTTGGAGCTTTCAATGTAA+TGG | - | chr1.2:5968774-5968793 | MS.gene24540:intron | 35.0% | |
| ! | AAATAATTTGCATGGCCACA+AGG | - | chr1.2:5968001-5968020 | MS.gene24540:intron | 35.0% |
| ! | ATGAATCTCTGAAGATGCAA+CGG | + | chr1.2:5967815-5967834 | None:intergenic | 35.0% |
| ! | CATGATATTTGAAGCAAGCA+AGG | - | chr1.2:5967864-5967883 | MS.gene24540:CDS | 35.0% |
| ! | GCATTTTGTGGTGTTTATGA+TGG | - | chr1.2:5968586-5968605 | MS.gene24540:intron | 35.0% |
| ! | GGTCTTATCATAGTTAACCT+TGG | - | chr1.2:5968959-5968978 | MS.gene24540:CDS | 35.0% |
| ! | TCCATATACTCCAAGTTTTG+TGG | + | chr1.2:5970169-5970188 | None:intergenic | 35.0% |
| !! | AAGAGCGATGCTATTTCTAA+CGG | + | chr1.2:5969634-5969653 | None:intergenic | 35.0% |
| !! | ATGAAAGATGGAGCATTTTG+TGG | - | chr1.2:5968574-5968593 | MS.gene24540:intron | 35.0% |
| !!! | TTTTGGCTCAAAATGAGAGA+TGG | + | chr1.2:5968661-5968680 | None:intergenic | 35.0% |
| AACTTGGAGTATATGGACAG+TGG | - | chr1.2:5970172-5970191 | MS.gene24540:CDS | 40.0% | |
| AAGAGGTTGCATCAATTGTG+TGG | - | chr1.2:5970017-5970036 | MS.gene24540:intron | 40.0% | |
| AGAATCTTACAAGGCAATCC+AGG | + | chr1.2:5969058-5969077 | None:intergenic | 40.0% | |
| ATAGACTAGTGAAACTGCAG+CGG | - | chr1.2:5969590-5969609 | MS.gene24540:intron | 40.0% | |
| ATATTGCTCTTGAGTCACCA+AGG | + | chr1.2:5968979-5968998 | None:intergenic | 40.0% | |
| ATTTCTTGCTTGAATCGCGT+TGG | - | chr1.2:5968392-5968411 | MS.gene24540:intron | 40.0% | |
| CAAAGAAGTTTCCTTCCTCT+AGG | - | chr1.2:5970101-5970120 | MS.gene24540:CDS | 40.0% | |
| CGGTTGTGTTTATGCGTTAA+AGG | - | chr1.2:5969716-5969735 | MS.gene24540:intron | 40.0% | |
| GCAACATTAGTCGCATTTGA+TGG | + | chr1.2:5968083-5968102 | None:intergenic | 40.0% | |
| GCAGAAGAAACCACAAAACT+TGG | - | chr1.2:5970156-5970175 | MS.gene24540:CDS | 40.0% | |
| GGTGACTCAAGAGCAATATT+AGG | - | chr1.2:5968980-5968999 | MS.gene24540:CDS | 40.0% | |
| GTTGCATCTTCAGAGATTCA+TGG | - | chr1.2:5967814-5967833 | MS.gene24540:CDS | 40.0% | |
| TCATGATTGAGAGACAAACC+TGG | + | chr1.2:5967972-5967991 | None:intergenic | 40.0% | |
| TGCTCCGTTTACTCTAAACA+AGG | - | chr1.2:5967910-5967929 | MS.gene24540:CDS | 40.0% | |
| TGCTGTAGTTGTCATAAGAC+AGG | - | chr1.2:5968849-5968868 | MS.gene24540:intron | 40.0% | |
| TTAAGCTGCTGATGTCTTCA+AGG | - | chr1.2:5969247-5969266 | MS.gene24540:CDS | 40.0% | |
| ! | ACTAGTCTATCGTGATGCTT+TGG | + | chr1.2:5969580-5969599 | None:intergenic | 40.0% |
| ! | TTTTGCATGGCTACACTACA+AGG | - | chr1.2:5968145-5968164 | MS.gene24540:CDS | 40.0% |
| !! | AGTTTTGTGGTTTCTTCTGC+AGG | + | chr1.2:5970156-5970175 | None:intergenic | 40.0% |
| !! | TGTGGTGTTTATGATGGACA+TGG | - | chr1.2:5968592-5968611 | MS.gene24540:intron | 40.0% |
| !!! | TCTCCTCAAGAGCATTCTTT+TGG | + | chr1.2:5968678-5968697 | None:intergenic | 40.0% |
| AACCACATGTCCAACGAGTA+TGG | - | chr1.2:5969742-5969761 | MS.gene24540:intron | 45.0% | |
| AACCATACTCGTTGGACATG+TGG | + | chr1.2:5969747-5969766 | None:intergenic | 45.0% | |
| CAATCATCTACCCTAGAGGA+AGG | + | chr1.2:5970115-5970134 | None:intergenic | 45.0% | |
| CAATCCAGGCTTCAAATCAG+TGG | + | chr1.2:5969044-5969063 | None:intergenic | 45.0% | |
| CAGGCGAAGCAAAGAGAATA+AGG | - | chr1.2:5969685-5969704 | MS.gene24540:intron | 45.0% | |
| CTGGTGTAGCAATAACACCA+TGG | + | chr1.2:5969833-5969852 | None:intergenic | 45.0% | |
| GAGCCAAAAGAATGCTCTTG+AGG | - | chr1.2:5968672-5968691 | MS.gene24540:intron | 45.0% | |
| GGTTGCATCAATTGTGTGGA+TGG | - | chr1.2:5970021-5970040 | MS.gene24540:intron | 45.0% | |
| GTGGTTTCTTCTGCAGGAAA+TGG | + | chr1.2:5970150-5970169 | None:intergenic | 45.0% | |
| !! | TTGACCACTGATTTGAAGCC+TGG | - | chr1.2:5969037-5969056 | MS.gene24540:intron | 45.0% |
| AGAGTGAAGAGGAAGCTGCA+AGG | - | chr1.2:5970047-5970066 | MS.gene24540:CDS | 50.0% | |
| AGGCCAGGGTAGTTCTCATT+GGG | + | chr1.2:5969771-5969790 | None:intergenic | 50.0% | |
| ATCTCCGAAAGCTCGAGACA+TGG | + | chr1.2:5969796-5969815 | None:intergenic | 50.0% | |
| CATTGGGCAACCATACTCGT+TGG | + | chr1.2:5969755-5969774 | None:intergenic | 50.0% | |
| CTAGCCATGTCTCGAGCTTT+CGG | - | chr1.2:5969789-5969808 | MS.gene24540:intron | 50.0% | |
| CTGCAGGAAATGGCAAACCA+CGG | + | chr1.2:5970140-5970159 | None:intergenic | 50.0% | |
| GAGTGAAGAGGAAGCTGCAA+GGG | - | chr1.2:5970048-5970067 | MS.gene24540:CDS | 50.0% | |
| GGTGAAGAGAAGCAGCATCT+TGG | + | chr1.2:5967951-5967970 | None:intergenic | 50.0% | |
| GGTGCAATCATCTACCCTAG+AGG | + | chr1.2:5970119-5970138 | None:intergenic | 50.0% | |
| GTGGATGGTAGAGAGTGAAG+AGG | - | chr1.2:5970036-5970055 | MS.gene24540:CDS | 50.0% | |
| TAGGCCAGGGTAGTTCTCAT+TGG | + | chr1.2:5969772-5969791 | None:intergenic | 50.0% | |
| TAGGGTAGATGATTGCACCG+TGG | - | chr1.2:5970120-5970139 | MS.gene24540:CDS | 50.0% | |
| TTGCCCAATGAGAACTACCC+TGG | - | chr1.2:5969765-5969784 | MS.gene24540:intron | 50.0% | |
| ! | AGATGCTGCTTCTCTTCACC+AGG | - | chr1.2:5967951-5967970 | MS.gene24540:CDS | 50.0% |
| CGAAAGCTCGAGACATGGCT+AGG | + | chr1.2:5969791-5969810 | None:intergenic | 55.0% | |
| CTTCTTTGCCCATGCAGCTG+TGG | + | chr1.2:5970089-5970108 | None:intergenic | 55.0% | |
| AGAGGAAGCTGCAAGGGCAG+TGG | - | chr1.2:5970054-5970073 | MS.gene24540:CDS | 60.0% | |
| CTCGAGACATGGCTAGGCCA+GGG | + | chr1.2:5969785-5969804 | None:intergenic | 60.0% | |
| GGAAGCAGCCACAGCTGCAT+GGG | - | chr1.2:5970078-5970097 | MS.gene24540:CDS | 60.0% | |
| TGGAAGCAGCCACAGCTGCA+TGG | - | chr1.2:5970077-5970096 | MS.gene24540:CDS | 60.0% | |
| GCTCGAGACATGGCTAGGCC+AGG | + | chr1.2:5969786-5969805 | None:intergenic | 65.0% | |
| GGAAGCTGCAAGGGCAGTGG+TGG | - | chr1.2:5970057-5970076 | MS.gene24540:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 5967796 | 5970207 | 5967796 | ID=MS.gene24540 |
| chr1.2 | mRNA | 5967796 | 5970207 | 5967796 | ID=MS.gene24540.t1;Parent=MS.gene24540 |
| chr1.2 | exon | 5970031 | 5970207 | 5970031 | ID=MS.gene24540.t1.exon1;Parent=MS.gene24540.t1 |
| chr1.2 | CDS | 5970031 | 5970207 | 5970031 | ID=cds.MS.gene24540.t1;Parent=MS.gene24540.t1 |
| chr1.2 | exon | 5969133 | 5969438 | 5969133 | ID=MS.gene24540.t1.exon2;Parent=MS.gene24540.t1 |
| chr1.2 | CDS | 5969133 | 5969438 | 5969133 | ID=cds.MS.gene24540.t1;Parent=MS.gene24540.t1 |
| chr1.2 | exon | 5968936 | 5969050 | 5968936 | ID=MS.gene24540.t1.exon3;Parent=MS.gene24540.t1 |
| chr1.2 | CDS | 5968936 | 5969050 | 5968936 | ID=cds.MS.gene24540.t1;Parent=MS.gene24540.t1 |
| chr1.2 | exon | 5968092 | 5968315 | 5968092 | ID=MS.gene24540.t1.exon4;Parent=MS.gene24540.t1 |
| chr1.2 | CDS | 5968092 | 5968315 | 5968092 | ID=cds.MS.gene24540.t1;Parent=MS.gene24540.t1 |
| chr1.2 | exon | 5967796 | 5968008 | 5967796 | ID=MS.gene24540.t1.exon5;Parent=MS.gene24540.t1 |
| chr1.2 | CDS | 5967796 | 5968008 | 5967796 | ID=cds.MS.gene24540.t1;Parent=MS.gene24540.t1 |
| Gene Sequence |
| Protein sequence |
