Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39635.t1 | XP_003607993.2 | 94.6 | 202 | 6 | 1 | 1 | 202 | 1 | 197 | 2.50E-111 | 411.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39635.t1 | B6TZ45 | 66.7 | 123 | 41 | 0 | 69 | 191 | 51 | 173 | 9.6e-48 | 191.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39635.t1 | G7JLA3 | 94.6 | 202 | 6 | 1 | 1 | 202 | 1 | 197 | 1.8e-111 | 411.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049259 | MS.gene39635 | 0.838593 | 2.62E-57 | -1.69E-46 |
| MS.gene049281 | MS.gene39635 | 0.811621 | 6.39E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene39635 | -0.807534 | 4.82E-50 | -1.69E-46 |
| MS.gene049320 | MS.gene39635 | -0.834554 | 2.80E-56 | -1.69E-46 |
| MS.gene049483 | MS.gene39635 | 0.81094 | 8.98E-51 | -1.69E-46 |
| MS.gene049549 | MS.gene39635 | 0.81836 | 2.04E-52 | -1.69E-46 |
| MS.gene049611 | MS.gene39635 | 0.864721 | 9.91E-65 | -1.69E-46 |
| MS.gene049634 | MS.gene39635 | 0.849589 | 2.94E-60 | -1.69E-46 |
| MS.gene05010 | MS.gene39635 | -0.806369 | 8.51E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene39635 | -0.801316 | 9.54E-49 | -1.69E-46 |
| MS.gene050165 | MS.gene39635 | -0.801486 | 8.80E-49 | -1.69E-46 |
| MS.gene050173 | MS.gene39635 | 0.840337 | 9.24E-58 | -1.69E-46 |
| MS.gene050216 | MS.gene39635 | -0.808461 | 3.06E-50 | -1.69E-46 |
| MS.gene050323 | MS.gene39635 | -0.807245 | 5.55E-50 | -1.69E-46 |
| MS.gene050380 | MS.gene39635 | 0.803493 | 3.40E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene39635 | 0.879645 | 1.05E-69 | -1.69E-46 |
| MS.gene050496 | MS.gene39635 | -0.819048 | 1.43E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene39635 | -0.833589 | 4.89E-56 | -1.69E-46 |
| MS.gene050612 | MS.gene39635 | -0.847552 | 1.08E-59 | -1.69E-46 |
| MS.gene050675 | MS.gene39635 | -0.820599 | 6.30E-53 | -1.69E-46 |
| MS.gene050699 | MS.gene39635 | -0.808152 | 3.56E-50 | -1.69E-46 |
| MS.gene05079 | MS.gene39635 | 0.828605 | 8.19E-55 | -1.69E-46 |
| MS.gene050809 | MS.gene39635 | 0.811187 | 7.94E-51 | -1.69E-46 |
| MS.gene050833 | MS.gene39635 | 0.801684 | 8.02E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene39635 | -0.843554 | 1.30E-58 | -1.69E-46 |
| MS.gene050871 | MS.gene39635 | -0.846613 | 1.95E-59 | -1.69E-46 |
| MS.gene050883 | MS.gene39635 | 0.843723 | 1.18E-58 | -1.69E-46 |
| MS.gene050986 | MS.gene39635 | -0.827236 | 1.75E-54 | -1.69E-46 |
| MS.gene051044 | MS.gene39635 | 0.851343 | 9.44E-61 | -1.69E-46 |
| MS.gene05104 | MS.gene39635 | 0.844868 | 5.79E-59 | -1.69E-46 |
| MS.gene051127 | MS.gene39635 | 0.878931 | 1.88E-69 | -1.69E-46 |
| MS.gene051138 | MS.gene39635 | 0.877656 | 5.27E-69 | -1.69E-46 |
| MS.gene051364 | MS.gene39635 | 0.801527 | 8.63E-49 | -1.69E-46 |
| MS.gene051366 | MS.gene39635 | 0.808007 | 3.83E-50 | -1.69E-46 |
| MS.gene051422 | MS.gene39635 | 0.802617 | 5.15E-49 | -1.69E-46 |
| MS.gene051632 | MS.gene39635 | 0.85562 | 5.58E-62 | -1.69E-46 |
| MS.gene051810 | MS.gene39635 | -0.81288 | 3.39E-51 | -1.69E-46 |
| MS.gene051863 | MS.gene39635 | 0.834515 | 2.87E-56 | -1.69E-46 |
| MS.gene051946 | MS.gene39635 | 0.811646 | 6.31E-51 | -1.69E-46 |
| MS.gene052211 | MS.gene39635 | 0.815005 | 1.15E-51 | -1.69E-46 |
| MS.gene05240 | MS.gene39635 | 0.814586 | 1.43E-51 | -1.69E-46 |
| MS.gene052805 | MS.gene39635 | 0.827478 | 1.53E-54 | -1.69E-46 |
| MS.gene053069 | MS.gene39635 | 0.831174 | 1.94E-55 | -1.69E-46 |
| MS.gene053203 | MS.gene39635 | -0.804031 | 2.63E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene39635 | 0.868138 | 8.16E-66 | -1.69E-46 |
| MS.gene053488 | MS.gene39635 | 0.959008 | 5.69E-117 | -1.69E-46 |
| MS.gene053561 | MS.gene39635 | 0.87915 | 1.58E-69 | -1.69E-46 |
| MS.gene053887 | MS.gene39635 | 0.839886 | 1.21E-57 | -1.69E-46 |
| MS.gene054054 | MS.gene39635 | 0.847237 | 1.31E-59 | -1.69E-46 |
| MS.gene054056 | MS.gene39635 | 0.843502 | 1.35E-58 | -1.69E-46 |
| MS.gene054616 | MS.gene39635 | 0.823086 | 1.67E-53 | -1.69E-46 |
| MS.gene054642 | MS.gene39635 | -0.804202 | 2.42E-49 | -1.69E-46 |
| MS.gene054707 | MS.gene39635 | 0.828531 | 8.54E-55 | -1.69E-46 |
| MS.gene054708 | MS.gene39635 | 0.847916 | 8.54E-60 | -1.69E-46 |
| MS.gene054954 | MS.gene39635 | -0.81336 | 2.66E-51 | -1.69E-46 |
| MS.gene054959 | MS.gene39635 | 0.801792 | 7.62E-49 | -1.69E-46 |
| MS.gene055124 | MS.gene39635 | 0.870774 | 1.13E-66 | -1.69E-46 |
| MS.gene055139 | MS.gene39635 | 0.80208 | 6.65E-49 | -1.69E-46 |
| MS.gene055154 | MS.gene39635 | 0.884436 | 1.92E-71 | -1.69E-46 |
| MS.gene055202 | MS.gene39635 | 0.811657 | 6.27E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene39635 | -0.830232 | 3.30E-55 | -1.69E-46 |
| MS.gene055502 | MS.gene39635 | -0.834148 | 3.54E-56 | -1.69E-46 |
| MS.gene055577 | MS.gene39635 | -0.80731 | 5.38E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene39635 | -0.816482 | 5.41E-52 | -1.69E-46 |
| MS.gene055942 | MS.gene39635 | 0.856478 | 3.13E-62 | -1.69E-46 |
| MS.gene056224 | MS.gene39635 | 0.852195 | 5.41E-61 | -1.69E-46 |
| MS.gene056311 | MS.gene39635 | 0.814137 | 1.80E-51 | -1.69E-46 |
| MS.gene056313 | MS.gene39635 | 0.801795 | 7.61E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene39635 | -0.835601 | 1.53E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene39635 | -0.819537 | 1.10E-52 | -1.69E-46 |
| MS.gene056856 | MS.gene39635 | 0.839649 | 1.40E-57 | -1.69E-46 |
| MS.gene057014 | MS.gene39635 | 0.824408 | 8.20E-54 | -1.69E-46 |
| MS.gene057549 | MS.gene39635 | 0.843417 | 1.42E-58 | -1.69E-46 |
| MS.gene058068 | MS.gene39635 | 0.850837 | 1.31E-60 | -1.69E-46 |
| MS.gene058093 | MS.gene39635 | 0.853826 | 1.85E-61 | -1.69E-46 |
| MS.gene058099 | MS.gene39635 | 0.88617 | 4.32E-72 | -1.69E-46 |
| MS.gene058108 | MS.gene39635 | 0.829275 | 5.64E-55 | -1.69E-46 |
| MS.gene058109 | MS.gene39635 | 0.835405 | 1.71E-56 | -1.69E-46 |
| MS.gene058111 | MS.gene39635 | 0.814088 | 1.84E-51 | -1.69E-46 |
| MS.gene058117 | MS.gene39635 | 0.808735 | 2.68E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene39635 | -0.812077 | 5.08E-51 | -1.69E-46 |
| MS.gene058171 | MS.gene39635 | 0.866869 | 2.08E-65 | -1.69E-46 |
| MS.gene058173 | MS.gene39635 | 0.855886 | 4.67E-62 | -1.69E-46 |
| MS.gene058175 | MS.gene39635 | 0.868135 | 8.17E-66 | -1.69E-46 |
| MS.gene058179 | MS.gene39635 | 0.815661 | 8.24E-52 | -1.69E-46 |
| MS.gene058268 | MS.gene39635 | 0.823883 | 1.09E-53 | -1.69E-46 |
| MS.gene058269 | MS.gene39635 | 0.83301 | 6.82E-56 | -1.69E-46 |
| MS.gene058341 | MS.gene39635 | 0.822453 | 2.35E-53 | -1.69E-46 |
| MS.gene05837 | MS.gene39635 | -0.821908 | 3.14E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene39635 | -0.816957 | 4.23E-52 | -1.69E-46 |
| MS.gene058493 | MS.gene39635 | 0.830157 | 3.44E-55 | -1.69E-46 |
| MS.gene058603 | MS.gene39635 | 0.843834 | 1.10E-58 | -1.69E-46 |
| MS.gene058628 | MS.gene39635 | 0.809382 | 1.95E-50 | -1.69E-46 |
| MS.gene058629 | MS.gene39635 | 0.813363 | 2.66E-51 | -1.69E-46 |
| MS.gene058630 | MS.gene39635 | 0.80619 | 9.28E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene39635 | -0.800882 | 1.17E-48 | -1.69E-46 |
| MS.gene058840 | MS.gene39635 | 0.853528 | 2.25E-61 | -1.69E-46 |
| MS.gene059022 | MS.gene39635 | -0.855342 | 6.73E-62 | -1.69E-46 |
| MS.gene059037 | MS.gene39635 | 0.818827 | 1.60E-52 | -1.69E-46 |
| MS.gene059045 | MS.gene39635 | 0.828662 | 7.94E-55 | -1.69E-46 |
| MS.gene059223 | MS.gene39635 | 0.82679 | 2.24E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene39635 | -0.815254 | 1.02E-51 | -1.69E-46 |
| MS.gene059682 | MS.gene39635 | 0.801534 | 8.61E-49 | -1.69E-46 |
| MS.gene059690 | MS.gene39635 | 0.839875 | 1.22E-57 | -1.69E-46 |
| MS.gene059691 | MS.gene39635 | 0.831417 | 1.69E-55 | -1.69E-46 |
| MS.gene059694 | MS.gene39635 | 0.842011 | 3.36E-58 | -1.69E-46 |
| MS.gene059697 | MS.gene39635 | 0.843198 | 1.62E-58 | -1.69E-46 |
| MS.gene059703 | MS.gene39635 | 0.802742 | 4.86E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene39635 | -0.808602 | 2.86E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene39635 | -0.845886 | 3.07E-59 | -1.69E-46 |
| MS.gene059916 | MS.gene39635 | 0.831576 | 1.54E-55 | -1.69E-46 |
| MS.gene059953 | MS.gene39635 | 0.80226 | 6.11E-49 | -1.69E-46 |
| MS.gene059955 | MS.gene39635 | 0.811224 | 7.79E-51 | -1.69E-46 |
| MS.gene060205 | MS.gene39635 | 0.815495 | 8.98E-52 | -1.69E-46 |
| MS.gene060578 | MS.gene39635 | 0.813151 | 2.96E-51 | -1.69E-46 |
| MS.gene060595 | MS.gene39635 | 0.803264 | 3.79E-49 | -1.69E-46 |
| MS.gene06074 | MS.gene39635 | 0.82898 | 6.65E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene39635 | -0.810327 | 1.22E-50 | -1.69E-46 |
| MS.gene060778 | MS.gene39635 | -0.831867 | 1.31E-55 | -1.69E-46 |
| MS.gene06077 | MS.gene39635 | -0.829594 | 4.72E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39635.t1 | MTR_4g086330 | 94.554 | 202 | 6 | 1 | 1 | 202 | 1 | 197 | 9.35e-142 | 393 |
| MS.gene39635.t1 | MTR_4g086320 | 95.652 | 115 | 5 | 0 | 64 | 178 | 46 | 160 | 6.61e-80 | 235 |
| MS.gene39635.t1 | MTR_8g104870 | 49.057 | 159 | 74 | 1 | 39 | 190 | 15 | 173 | 1.03e-48 | 157 |
| MS.gene39635.t1 | MTR_5g017650 | 54.762 | 126 | 54 | 1 | 68 | 190 | 51 | 176 | 1.61e-45 | 149 |
| MS.gene39635.t1 | MTR_8g104890 | 50.000 | 166 | 81 | 1 | 39 | 202 | 4 | 169 | 2.38e-45 | 148 |
| MS.gene39635.t1 | MTR_6g084940 | 47.482 | 139 | 71 | 2 | 64 | 202 | 13 | 149 | 1.19e-35 | 122 |
| MS.gene39635.t1 | MTR_1g075550 | 57.143 | 112 | 47 | 1 | 68 | 179 | 11 | 121 | 8.22e-32 | 112 |
| MS.gene39635.t1 | MTR_8g104830 | 42.143 | 140 | 77 | 3 | 67 | 202 | 7 | 146 | 8.54e-30 | 107 |
| MS.gene39635.t1 | MTR_2g101660 | 40.458 | 131 | 78 | 0 | 69 | 199 | 33 | 163 | 5.03e-29 | 106 |
| MS.gene39635.t1 | MTR_5g008240 | 33.333 | 210 | 104 | 8 | 2 | 196 | 55 | 243 | 1.08e-25 | 100 |
| MS.gene39635.t1 | MTR_5g008240 | 33.175 | 211 | 105 | 8 | 1 | 196 | 30 | 219 | 1.74e-25 | 99.0 |
| MS.gene39635.t1 | MTR_5g008240 | 38.356 | 146 | 69 | 5 | 66 | 196 | 38 | 177 | 2.10e-25 | 97.8 |
| MS.gene39635.t1 | MTR_2g101660 | 40.870 | 115 | 68 | 0 | 85 | 199 | 1 | 115 | 1.35e-24 | 93.6 |
| MS.gene39635.t1 | MTR_5g008240 | 37.795 | 127 | 58 | 5 | 85 | 196 | 39 | 159 | 1.22e-17 | 77.0 |
| MS.gene39635.t1 | MTR_7g044840 | 30.370 | 135 | 66 | 3 | 64 | 170 | 55 | 189 | 2.16e-14 | 69.7 |
| MS.gene39635.t1 | MTR_0172s0050 | 31.056 | 161 | 69 | 5 | 46 | 174 | 50 | 200 | 1.63e-12 | 64.7 |
| MS.gene39635.t1 | MTR_8g075150 | 30.357 | 168 | 104 | 5 | 9 | 172 | 246 | 404 | 2.89e-12 | 65.1 |
| MS.gene39635.t1 | MTR_3g408350 | 28.662 | 157 | 73 | 3 | 44 | 171 | 44 | 190 | 3.89e-12 | 63.5 |
| MS.gene39635.t1 | MTR_5g022670 | 35.043 | 117 | 69 | 3 | 59 | 172 | 285 | 397 | 6.45e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39635.t1 | AT1G14870 | 54.348 | 138 | 60 | 2 | 68 | 202 | 15 | 152 | 1.04e-51 | 164 |
| MS.gene39635.t1 | AT5G35525 | 55.072 | 138 | 59 | 2 | 68 | 202 | 15 | 152 | 1.63e-50 | 160 |
| MS.gene39635.t1 | AT3G18470 | 51.493 | 134 | 60 | 1 | 67 | 200 | 3 | 131 | 1.55e-44 | 145 |
| MS.gene39635.t1 | AT1G14870 | 56.364 | 110 | 48 | 0 | 69 | 178 | 16 | 125 | 2.36e-43 | 142 |
| MS.gene39635.t1 | AT1G14880 | 48.551 | 138 | 68 | 2 | 68 | 202 | 14 | 151 | 2.94e-43 | 142 |
| MS.gene39635.t1 | AT1G49030 | 43.902 | 164 | 82 | 2 | 36 | 196 | 62 | 218 | 4.00e-42 | 142 |
| MS.gene39635.t1 | AT3G18460 | 48.819 | 127 | 62 | 2 | 69 | 195 | 54 | 177 | 1.09e-40 | 137 |
| MS.gene39635.t1 | AT1G68610 | 51.678 | 149 | 66 | 3 | 60 | 202 | 10 | 158 | 3.22e-39 | 132 |
| MS.gene39635.t1 | AT3G18450 | 42.636 | 129 | 73 | 1 | 67 | 195 | 50 | 177 | 7.13e-36 | 124 |
| MS.gene39635.t1 | AT1G68630 | 45.205 | 146 | 73 | 3 | 54 | 199 | 19 | 157 | 1.04e-33 | 118 |
| MS.gene39635.t1 | AT1G52200 | 38.961 | 154 | 86 | 2 | 45 | 191 | 30 | 182 | 9.80e-30 | 108 |
| MS.gene39635.t1 | AT1G58320 | 47.445 | 137 | 66 | 5 | 68 | 202 | 16 | 148 | 2.88e-29 | 106 |
| MS.gene39635.t1 | AT1G52200 | 40.845 | 142 | 81 | 2 | 45 | 186 | 30 | 168 | 7.51e-28 | 103 |
| MS.gene39635.t1 | AT2G40935 | 36.905 | 168 | 83 | 5 | 22 | 171 | 2 | 164 | 2.20e-24 | 95.1 |
| MS.gene39635.t1 | AT2G40935 | 36.905 | 168 | 83 | 5 | 22 | 171 | 2 | 164 | 2.20e-24 | 95.1 |
| MS.gene39635.t1 | AT2G40935 | 36.905 | 168 | 83 | 5 | 22 | 171 | 2 | 164 | 2.20e-24 | 95.1 |
| MS.gene39635.t1 | AT2G40935 | 36.905 | 168 | 83 | 5 | 22 | 171 | 2 | 164 | 2.20e-24 | 95.1 |
| MS.gene39635.t1 | AT2G40935 | 36.905 | 168 | 83 | 5 | 22 | 171 | 2 | 164 | 2.20e-24 | 95.1 |
| MS.gene39635.t1 | AT2G40935 | 33.929 | 168 | 77 | 6 | 22 | 171 | 2 | 153 | 3.63e-17 | 75.9 |
| MS.gene39635.t1 | AT2G45010 | 32.143 | 140 | 66 | 2 | 64 | 174 | 11 | 150 | 1.04e-16 | 75.1 |
| MS.gene39635.t1 | AT2G45010 | 32.143 | 140 | 66 | 2 | 64 | 174 | 57 | 196 | 1.12e-16 | 75.9 |
| MS.gene39635.t1 | AT2G40935 | 36.000 | 150 | 68 | 6 | 40 | 171 | 1 | 140 | 8.38e-16 | 72.0 |
| MS.gene39635.t1 | AT2G40935 | 36.000 | 150 | 68 | 6 | 40 | 171 | 1 | 140 | 8.38e-16 | 72.0 |
| MS.gene39635.t1 | AT2G40935 | 36.000 | 150 | 68 | 6 | 40 | 171 | 1 | 140 | 8.38e-16 | 72.0 |
| MS.gene39635.t1 | AT5G51400 | 29.341 | 167 | 80 | 4 | 64 | 201 | 57 | 214 | 9.67e-15 | 70.9 |
Find 56 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTGTGATGGAACAATTTA+TGG | 0.162988 | 4.2:+24594778 | MS.gene39635:CDS |
| TTCTGCCCATGTGTTACTTT+TGG | 0.260194 | 4.2:+24594305 | MS.gene39635:CDS |
| CTTGAACTGGTGCTGATATA+TGG | 0.295600 | 4.2:-24594105 | None:intergenic |
| TCTTGGGATGCCCCTTGAAC+TGG | 0.352985 | 4.2:-24594118 | None:intergenic |
| ACATGATCTGTTTCACTTAC+GGG | 0.365548 | 4.2:-24593976 | None:intergenic |
| GTTGACCAGTGATGTGTTCT+TGG | 0.377366 | 4.2:-24594135 | None:intergenic |
| TGAAACTTGTGCTCTTTGTC+AGG | 0.408519 | 4.2:+24594921 | MS.gene39635:CDS |
| CTTGCCAGAGGCACCTTGTA+TGG | 0.422756 | 4.2:+24594876 | MS.gene39635:CDS |
| ACACGATCCTTACAGATTCC+AGG | 0.423026 | 4.2:-24594183 | None:intergenic |
| AGAACACATCACTGGTCAAC+TGG | 0.424557 | 4.2:+24594138 | MS.gene39635:CDS |
| TGCCGTTGTCTTGATGATCC+TGG | 0.428665 | 4.2:+24594165 | MS.gene39635:CDS |
| AACAATTTATGGGGCGCTAC+TGG | 0.429042 | 4.2:+24594789 | MS.gene39635:CDS |
| TACATGATCTGTTTCACTTA+CGG | 0.430083 | 4.2:-24593977 | None:intergenic |
| CTGATATATGGAGGAGCATA+AGG | 0.431906 | 4.2:-24594093 | None:intergenic |
| TTGACCAGTGATGTGTTCTT+GGG | 0.472581 | 4.2:-24594134 | None:intergenic |
| GGGGCGCTACTGGCTGTGTC+GGG | 0.479808 | 4.2:+24594799 | MS.gene39635:CDS |
| TGGGGCGCTACTGGCTGTGT+CGG | 0.483383 | 4.2:+24594798 | MS.gene39635:CDS |
| CTTGTCATAGGTGAAATCAT+TGG | 0.483757 | 4.2:-24595908 | None:intergenic |
| CAGTCCATACAAGGTGCCTC+TGG | 0.489012 | 4.2:-24594880 | None:intergenic |
| GGGAGGATACATATTGTTGT+TGG | 0.490981 | 4.2:-24593956 | None:intergenic |
| GTCCTACAAATGCCAAGTTA+TGG | 0.492297 | 4.2:+24594054 | MS.gene39635:CDS |
| TGCCATAACTTGGCATTTGT+AGG | 0.492803 | 4.2:-24594056 | None:intergenic |
| CTTGTGATGGAACAATTTAT+GGG | 0.493346 | 4.2:+24594779 | MS.gene39635:CDS |
| CATATATCAGCACCAGTTCA+AGG | 0.493929 | 4.2:+24594106 | MS.gene39635:CDS |
| GACACTGGCATGCCATAACT+TGG | 0.500092 | 4.2:-24594066 | None:intergenic |
| AGGATACATATTGTTGTTGG+TGG | 0.512336 | 4.2:-24593953 | None:intergenic |
| GGACATAGCCTTGACCTTGA+GGG | 0.520075 | 4.2:-24594035 | None:intergenic |
| GGTGGTGCTAGTGCAACTCC+TGG | 0.522010 | 4.2:-24595887 | None:intergenic |
| GGAGCATAAGGTTGTGACAC+TGG | 0.542568 | 4.2:-24594081 | None:intergenic |
| TGGCCTCTGTCTTTCCACGT+TGG | 0.547801 | 4.2:-24595867 | None:intergenic |
| TGAACTAAGCAGTCCATACA+AGG | 0.555249 | 4.2:-24594889 | None:intergenic |
| TATGCAGATCATAGTAGTCA+TGG | 0.562595 | 4.2:+24594000 | MS.gene39635:CDS |
| ATATATCAGCACCAGTTCAA+GGG | 0.567137 | 4.2:+24594107 | MS.gene39635:CDS |
| GTTATTATCGCTCAAAACTG+AGG | 0.570843 | 4.2:+24594842 | MS.gene39635:CDS |
| AACGTGGAAAGACAGAGGCC+AGG | 0.580413 | 4.2:+24595869 | MS.gene39635:CDS |
| AGGACATAGCCTTGACCTTG+AGG | 0.581870 | 4.2:-24594036 | None:intergenic |
| GACATAGCCTTGACCTTGAG+GGG | 0.583468 | 4.2:-24594034 | None:intergenic |
| TATGCAGCTTGCACTTGTGA+TGG | 0.596135 | 4.2:+24594766 | MS.gene39635:intron |
| ATCAATCCAAAAGTAACACA+TGG | 0.609342 | 4.2:-24594311 | None:intergenic |
| GTCATAGGTGAAATCATTGG+TGG | 0.613790 | 4.2:-24595905 | None:intergenic |
| GCATCCCAAGAACACATCAC+TGG | 0.621240 | 4.2:+24594130 | MS.gene39635:CDS |
| TATATCAGCACCAGTTCAAG+GGG | 0.623123 | 4.2:+24594108 | MS.gene39635:CDS |
| GATCATAGTAGTCATGGCCA+TGG | 0.626268 | 4.2:+24594006 | MS.gene39635:CDS |
| TTATTATCGCTCAAAACTGA+GGG | 0.630443 | 4.2:+24594843 | MS.gene39635:CDS |
| CGTGGATATGACATGAGCAT+AGG | 0.632539 | 4.2:+24594964 | MS.gene39635:CDS |
| CTATGCTCATGTCATATCCA+CGG | 0.633181 | 4.2:-24594963 | None:intergenic |
| TTGTGATGGAACAATTTATG+GGG | 0.659307 | 4.2:+24594780 | MS.gene39635:CDS |
| TTCCAGGATCATCAAGACAA+CGG | 0.663060 | 4.2:-24594167 | None:intergenic |
| TGATCTGTTTCACTTACGGG+AGG | 0.664833 | 4.2:-24593973 | None:intergenic |
| ATAGCAGAGATAGTAGACAA+AGG | 0.671471 | 4.2:+24594332 | MS.gene39635:CDS |
| TATAGGTTGGGATGCCAACG+TGG | 0.679210 | 4.2:+24595853 | MS.gene39635:intron |
| ACATAGCCTTGACCTTGAGG+GGG | 0.690202 | 4.2:-24594033 | None:intergenic |
| TCAATCCAAAAGTAACACAT+GGG | 0.696087 | 4.2:-24594310 | None:intergenic |
| ATGCCAACGTGGAAAGACAG+AGG | 0.696902 | 4.2:+24595864 | MS.gene39635:CDS |
| GAACTGGTGCTGATATATGG+AGG | 0.713639 | 4.2:-24594102 | None:intergenic |
| GGCACAATATGACTTGCCAG+AGG | 0.740534 | 4.2:+24594864 | MS.gene39635:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACACATATTATATATATTA+TGG | + | chr4.2:24594234-24594253 | MS.gene39635:intron | 10.0% |
| !! | ATTAAATGAAATTAAGTTAA+GGG | + | chr4.2:24594655-24594674 | MS.gene39635:intron | 10.0% |
| !! | CATTAAATGAAATTAAGTTA+AGG | + | chr4.2:24594654-24594673 | MS.gene39635:intron | 15.0% |
| !! | TAGAAAAATCTATTACAATA+AGG | + | chr4.2:24595555-24595574 | MS.gene39635:intron | 15.0% |
| !!! | AAAGCTTTTACATAAAATAT+AGG | + | chr4.2:24594370-24594389 | MS.gene39635:intron | 15.0% |
| !!! | ATAAGATTTTTATCTTAGTA+AGG | - | chr4.2:24595585-24595604 | None:intergenic | 15.0% |
| !!! | ATAATATGTGTTTTAAAGAA+AGG | - | chr4.2:24594226-24594245 | None:intergenic | 15.0% |
| !!! | ATCTTTTTTTTATGTCATTT+TGG | + | chr4.2:24594447-24594466 | MS.gene39635:intron | 15.0% |
| !!! | CATTATTATTTATCATGTTT+TGG | + | chr4.2:24594735-24594754 | MS.gene39635:intron | 15.0% |
| !!! | CATTTTATTTTTCTATTTGT+TGG | - | chr4.2:24595500-24595519 | None:intergenic | 15.0% |
| !!! | CTTAATTTCATTTAATGTTT+TGG | - | chr4.2:24594651-24594670 | None:intergenic | 15.0% |
| !!! | TTTTTCTTTTCTAATTGATA+AGG | + | chr4.2:24594269-24594288 | MS.gene39635:intron | 15.0% |
| !! | AAGTATTTGAAGAAAGAATT+AGG | - | chr4.2:24594992-24595011 | None:intergenic | 20.0% |
| !! | ATTAAGAAAATAGAGATTCT+TGG | - | chr4.2:24595726-24595745 | None:intergenic | 20.0% |
| !! | TGACATAAAAAAAAGATACA+AGG | - | chr4.2:24594444-24594463 | None:intergenic | 20.0% |
| !! | TTAAGAAAATAGAGATTCTT+GGG | - | chr4.2:24595725-24595744 | None:intergenic | 20.0% |
| !!! | AGTTTTTTCTCATGTAATTT+TGG | - | chr4.2:24594622-24594641 | None:intergenic | 20.0% |
| !!! | GTTTCTAACTTAAATTTTTG+AGG | + | chr4.2:24595768-24595787 | MS.gene39635:intron | 20.0% |
| !!! | GTTTTTTCTCATGTAATTTT+GGG | - | chr4.2:24594621-24594640 | None:intergenic | 20.0% |
| ! | CTTGAAAATTCATATGCAAA+CGG | + | chr4.2:24594586-24594605 | MS.gene39635:intron | 25.0% |
| ! | GAATAAAATGTAACGTCTTA+AGG | + | chr4.2:24595430-24595449 | MS.gene39635:intron | 25.0% |
| ! | TGTTGTTGGATATATAATAG+AGG | + | chr4.2:24595148-24595167 | MS.gene39635:intron | 25.0% |
| !! | CTTTTCTAATTGATAAGGTT+TGG | + | chr4.2:24594274-24594293 | MS.gene39635:intron | 25.0% |
| !! | TTTAATTTCAAGTGACGTTT+AGG | + | chr4.2:24594418-24594437 | MS.gene39635:intron | 25.0% |
| !!! | ATTTTCAAGCTTCAAATCTA+TGG | + | chr4.2:24594485-24594504 | MS.gene39635:intron | 25.0% |
| AAATTAAGTTAAGGGACAAC+AGG | + | chr4.2:24594663-24594682 | MS.gene39635:intron | 30.0% | |
| AACTTGCACTTAATAGTAAC+CGG | + | chr4.2:24595608-24595627 | MS.gene39635:intron | 30.0% | |
| ATCAATCCAAAAGTAACACA+TGG | - | chr4.2:24594314-24594333 | None:intergenic | 30.0% | |
| TACATGATCTGTTTCACTTA+CGG | - | chr4.2:24593980-24593999 | None:intergenic | 30.0% | |
| TCAATCCAAAAGTAACACAT+GGG | - | chr4.2:24594313-24594332 | None:intergenic | 30.0% | |
| TCATGTTCATATGCAAACAT+GGG | - | chr4.2:24594557-24594576 | None:intergenic | 30.0% | |
| TGTTGGATATATAATAGAGG+TGG | + | chr4.2:24595151-24595170 | MS.gene39635:intron | 30.0% | |
| TTATTATCGCTCAAAACTGA+GGG | + | chr4.2:24594843-24594862 | MS.gene39635:CDS | 30.0% | |
| TTGTGTTGGATCCTATTATA+GGG | + | chr4.2:24595336-24595355 | MS.gene39635:intron | 30.0% | |
| ! | AATGTAACGTCTTAAGGTTT+TGG | + | chr4.2:24595436-24595455 | MS.gene39635:intron | 30.0% |
| ! | ACCTTAAGGTATTAGGTATA+TGG | - | chr4.2:24595178-24595197 | None:intergenic | 30.0% |
| ! | ACTTGTGATGGAACAATTTA+TGG | + | chr4.2:24594778-24594797 | MS.gene39635:CDS | 30.0% |
| ! | ATCTAGTTGAAGTTTGTTCA+AGG | - | chr4.2:24595644-24595663 | None:intergenic | 30.0% |
| ! | ATGTAACGTCTTAAGGTTTT+GGG | + | chr4.2:24595437-24595456 | MS.gene39635:intron | 30.0% |
| ! | CCTTAAGGTATTAGGTATAT+GGG | - | chr4.2:24595177-24595196 | None:intergenic | 30.0% |
| ! | CTTGTGATGGAACAATTTAT+GGG | + | chr4.2:24594779-24594798 | MS.gene39635:CDS | 30.0% |
| ! | TACCTAATACCTTAAGGTTT+TGG | + | chr4.2:24595180-24595199 | MS.gene39635:intron | 30.0% |
| ! | TTCCAAAACCTTAAGGTATT+AGG | - | chr4.2:24595185-24595204 | None:intergenic | 30.0% |
| ! | TTGTGATGGAACAATTTATG+GGG | + | chr4.2:24594780-24594799 | MS.gene39635:CDS | 30.0% |
| ! | TTTATTTACCTGTGACTTGT+CGG | + | chr4.2:24594509-24594528 | MS.gene39635:intron | 30.0% |
| !!! | TAATACCTTAAGGTTTTGGA+AGG | + | chr4.2:24595184-24595203 | MS.gene39635:intron | 30.0% |
| AATAGAGATCCGACTAAAAG+TGG | + | chr4.2:24595687-24595706 | MS.gene39635:intron | 35.0% | |
| ACATGATCTGTTTCACTTAC+GGG | - | chr4.2:24593979-24593998 | None:intergenic | 35.0% | |
| ATAGCAGAGATAGTAGACAA+AGG | + | chr4.2:24594332-24594351 | MS.gene39635:CDS | 35.0% | |
| ATATATCAGCACCAGTTCAA+GGG | + | chr4.2:24594107-24594126 | MS.gene39635:CDS | 35.0% | |
| ATGTTGAGTTCAAGTGTAAG+TGG | + | chr4.2:24595093-24595112 | MS.gene39635:intron | 35.0% | |
| CCCATATACCTAATACCTTA+AGG | + | chr4.2:24595174-24595193 | MS.gene39635:intron | 35.0% | |
| CTCATGTTCATATGCAAACA+TGG | - | chr4.2:24594558-24594577 | None:intergenic | 35.0% | |
| CTTGTCATAGGTGAAATCAT+TGG | - | chr4.2:24595911-24595930 | None:intergenic | 35.0% | |
| CTTGTGTTGGATCCTATTAT+AGG | + | chr4.2:24595335-24595354 | MS.gene39635:intron | 35.0% | |
| GTCAATGGGTAAAATGTTGT+TGG | + | chr4.2:24595134-24595153 | MS.gene39635:intron | 35.0% | |
| GTTAGTTGTGTGATATCGTA+TGG | + | chr4.2:24595804-24595823 | MS.gene39635:intron | 35.0% | |
| GTTATTATCGCTCAAAACTG+AGG | + | chr4.2:24594842-24594861 | MS.gene39635:CDS | 35.0% | |
| TATAGAGAACTCAAAAACCG+TGG | + | chr4.2:24594946-24594965 | MS.gene39635:CDS | 35.0% | |
| TATGCAGATCATAGTAGTCA+TGG | + | chr4.2:24594000-24594019 | MS.gene39635:CDS | 35.0% | |
| TGAGATGAGAAAACATGGTT+TGG | + | chr4.2:24595058-24595077 | MS.gene39635:intron | 35.0% | |
| ! | AGGATACATATTGTTGTTGG+TGG | - | chr4.2:24593956-24593975 | None:intergenic | 35.0% |
| ! | TCATGTAATTTTGGGCCTTT+TGG | - | chr4.2:24594613-24594632 | None:intergenic | 35.0% |
| ! | TTTAAGTTAGAAACCCGACT+TGG | - | chr4.2:24595762-24595781 | None:intergenic | 35.0% |
| !! | TTTTTGTCTAGCTTCCAAGT+CGG | + | chr4.2:24595745-24595764 | MS.gene39635:intron | 35.0% |
| AGGGATCTGATACAACTTGT+CGG | - | chr4.2:24595283-24595302 | None:intergenic | 40.0% | |
| AGTCTCACATCTCATGTCAA+TGG | + | chr4.2:24595119-24595138 | MS.gene39635:intron | 40.0% | |
| CATATATCAGCACCAGTTCA+AGG | + | chr4.2:24594106-24594125 | MS.gene39635:CDS | 40.0% | |
| CATCTCCTTCCAAAACCTTA+AGG | - | chr4.2:24595192-24595211 | None:intergenic | 40.0% | |
| CATCTCTTAAGCAATGTCTC+GGG | + | chr4.2:24595033-24595052 | MS.gene39635:intron | 40.0% | |
| CTATGCTCATGTCATATCCA+CGG | - | chr4.2:24594966-24594985 | None:intergenic | 40.0% | |
| CTTGTCGGTCTTCAAATCTA+TGG | + | chr4.2:24594524-24594543 | MS.gene39635:intron | 40.0% | |
| GCATCTCTTAAGCAATGTCT+CGG | + | chr4.2:24595032-24595051 | MS.gene39635:intron | 40.0% | |
| GGGAGGATACATATTGTTGT+TGG | - | chr4.2:24593959-24593978 | None:intergenic | 40.0% | |
| GTCATAGGTGAAATCATTGG+TGG | - | chr4.2:24595908-24595927 | None:intergenic | 40.0% | |
| GTCCTACAAATGCCAAGTTA+TGG | + | chr4.2:24594054-24594073 | MS.gene39635:CDS | 40.0% | |
| GTCTCACATCTCATGTCAAT+GGG | + | chr4.2:24595120-24595139 | MS.gene39635:intron | 40.0% | |
| TATATCAGCACCAGTTCAAG+GGG | + | chr4.2:24594108-24594127 | MS.gene39635:CDS | 40.0% | |
| TCATATGCAAACGGACCAAA+AGG | + | chr4.2:24594595-24594614 | MS.gene39635:intron | 40.0% | |
| TGAAACTTGTGCTCTTTGTC+AGG | + | chr4.2:24594921-24594940 | MS.gene39635:CDS | 40.0% | |
| TGAACTAAGCAGTCCATACA+AGG | - | chr4.2:24594892-24594911 | None:intergenic | 40.0% | |
| TGATGATCCTGGAATCTGTA+AGG | + | chr4.2:24594176-24594195 | MS.gene39635:intron | 40.0% | |
| TGCCATAACTTGGCATTTGT+AGG | - | chr4.2:24594059-24594078 | None:intergenic | 40.0% | |
| TGTTCAAGGTAGTTACAAGC+CGG | - | chr4.2:24595630-24595649 | None:intergenic | 40.0% | |
| TTCCAGGATCATCAAGACAA+CGG | - | chr4.2:24594170-24594189 | None:intergenic | 40.0% | |
| TTGACCAGTGATGTGTTCTT+GGG | - | chr4.2:24594137-24594156 | None:intergenic | 40.0% | |
| TTGACCCTTGACTATAGGTT+GGG | + | chr4.2:24595841-24595860 | MS.gene39635:intron | 40.0% | |
| TTGTTGGATTCAAGTGTGAG+TGG | + | chr4.2:24595383-24595402 | MS.gene39635:intron | 40.0% | |
| TTTGCTTGACCCTTGACTAT+AGG | + | chr4.2:24595836-24595855 | MS.gene39635:intron | 40.0% | |
| ! | CTGATATATGGAGGAGCATA+AGG | - | chr4.2:24594096-24594115 | None:intergenic | 40.0% |
| ! | GGGTTTGAGATGAGAAAACA+TGG | + | chr4.2:24595053-24595072 | MS.gene39635:intron | 40.0% |
| !! | CCTCACTAACCACTTTTAGT+CGG | - | chr4.2:24595699-24595718 | None:intergenic | 40.0% |
| !! | CTTGAACTGGTGCTGATATA+TGG | - | chr4.2:24594108-24594127 | None:intergenic | 40.0% |
| !! | TTGGACTCTAGAGCACAAAA+GGG | - | chr4.2:24595481-24595500 | None:intergenic | 40.0% |
| !! | TTTTGTCTAGCTTCCAAGTC+GGG | + | chr4.2:24595746-24595765 | MS.gene39635:intron | 40.0% |
| !!! | AACGTCTTAAGGTTTTGGGT+TGG | + | chr4.2:24595441-24595460 | MS.gene39635:intron | 40.0% |
| !!! | TAAGGTTTTGGAAGGAGATG+TGG | + | chr4.2:24595192-24595211 | MS.gene39635:intron | 40.0% |
| !!! | TTCTGCCCATGTGTTACTTT+TGG | + | chr4.2:24594305-24594324 | MS.gene39635:CDS | 40.0% |
| ACAACTTGTCGGGGAGTTTA+GGG | - | chr4.2:24595272-24595291 | None:intergenic | 45.0% | |
| ACACGATCCTTACAGATTCC+AGG | - | chr4.2:24594186-24594205 | None:intergenic | 45.0% | |
| AGAACACATCACTGGTCAAC+TGG | + | chr4.2:24594138-24594157 | MS.gene39635:CDS | 45.0% | |
| CCGACTAAAAGTGGTTAGTG+AGG | + | chr4.2:24595696-24595715 | MS.gene39635:intron | 45.0% | |
| CGTGGATATGACATGAGCAT+AGG | + | chr4.2:24594964-24594983 | MS.gene39635:CDS | 45.0% | |
| CTTGACCCTTGACTATAGGT+TGG | + | chr4.2:24595840-24595859 | MS.gene39635:intron | 45.0% | |
| GACAAGTTGTATCAGATCCC+TGG | + | chr4.2:24595282-24595301 | MS.gene39635:intron | 45.0% | |
| GATCATAGTAGTCATGGCCA+TGG | + | chr4.2:24594006-24594025 | MS.gene39635:CDS | 45.0% | |
| GCATCCCAACCTATAGTCAA+GGG | - | chr4.2:24595848-24595867 | None:intergenic | 45.0% | |
| GGATCTGATACAACTTGTCG+GGG | - | chr4.2:24595281-24595300 | None:intergenic | 45.0% | |
| GGGATCTGATACAACTTGTC+GGG | - | chr4.2:24595282-24595301 | None:intergenic | 45.0% | |
| GTTGACCAGTGATGTGTTCT+TGG | - | chr4.2:24594138-24594157 | None:intergenic | 45.0% | |
| GTTGTATCAGATCCCTGGTT+CGG | + | chr4.2:24595287-24595306 | MS.gene39635:intron | 45.0% | |
| TACAACTTGTCGGGGAGTTT+AGG | - | chr4.2:24595273-24595292 | None:intergenic | 45.0% | |
| TATGCAGCTTGCACTTGTGA+TGG | + | chr4.2:24594766-24594785 | MS.gene39635:intron | 45.0% | |
| TGATCTGTTTCACTTACGGG+AGG | - | chr4.2:24593976-24593995 | None:intergenic | 45.0% | |
| TGGATCCTATTATAGGGCGT+GGG | + | chr4.2:24595342-24595361 | MS.gene39635:intron | 45.0% | |
| TTGGATCCTATTATAGGGCG+TGG | + | chr4.2:24595341-24595360 | MS.gene39635:intron | 45.0% | |
| TTTGAAGACCGACAAGTCAC+AGG | - | chr4.2:24594520-24594539 | None:intergenic | 45.0% | |
| ! | AACAATTTATGGGGCGCTAC+TGG | + | chr4.2:24594789-24594808 | MS.gene39635:CDS | 45.0% |
| !! | GAACTGGTGCTGATATATGG+AGG | - | chr4.2:24594105-24594124 | None:intergenic | 45.0% |
| !! | GTTGGACTCTAGAGCACAAA+AGG | - | chr4.2:24595482-24595501 | None:intergenic | 45.0% |
| !! | TGGACTCTAGAGCACAAAAG+GGG | - | chr4.2:24595480-24595499 | None:intergenic | 45.0% |
| AGGGAAGTCGGAAGCAACAA+CGG | - | chr4.2:24595253-24595272 | None:intergenic | 50.0% | |
| ATGCCAACGTGGAAAGACAG+AGG | + | chr4.2:24595864-24595883 | MS.gene39635:CDS | 50.0% | |
| GACACTGGCATGCCATAACT+TGG | - | chr4.2:24594069-24594088 | None:intergenic | 50.0% | |
| GATGGAGCTGGATCTTGTGT+TGG | + | chr4.2:24595322-24595341 | MS.gene39635:intron | 50.0% | |
| GCACTTGAGGGAGAGATTGT+TGG | + | chr4.2:24595367-24595386 | MS.gene39635:intron | 50.0% | |
| GCATCCCAAGAACACATCAC+TGG | + | chr4.2:24594130-24594149 | MS.gene39635:CDS | 50.0% | |
| GGAGCATAAGGTTGTGACAC+TGG | - | chr4.2:24594084-24594103 | None:intergenic | 50.0% | |
| GGCATCCCAACCTATAGTCA+AGG | - | chr4.2:24595849-24595868 | None:intergenic | 50.0% | |
| TGCTTCCCACGCCCTATAAT+AGG | - | chr4.2:24595350-24595369 | None:intergenic | 50.0% | |
| ! | ACATAGCCTTGACCTTGAGG+GGG | - | chr4.2:24594036-24594055 | None:intergenic | 50.0% |
| ! | AGGACATAGCCTTGACCTTG+AGG | - | chr4.2:24594039-24594058 | None:intergenic | 50.0% |
| ! | GACATAGCCTTGACCTTGAG+GGG | - | chr4.2:24594037-24594056 | None:intergenic | 50.0% |
| ! | GGACATAGCCTTGACCTTGA+GGG | - | chr4.2:24594038-24594057 | None:intergenic | 50.0% |
| ! | GGCACAATATGACTTGCCAG+AGG | + | chr4.2:24594864-24594883 | MS.gene39635:CDS | 50.0% |
| ! | TATAGGTTGGGATGCCAACG+TGG | + | chr4.2:24595853-24595872 | MS.gene39635:intron | 50.0% |
| ! | TGCCGTTGTCTTGATGATCC+TGG | + | chr4.2:24594165-24594184 | MS.gene39635:CDS | 50.0% |
| !! | GGACTCTAGAGCACAAAAGG+GGG | - | chr4.2:24595479-24595498 | None:intergenic | 50.0% |
| AACGTGGAAAGACAGAGGCC+AGG | + | chr4.2:24595869-24595888 | MS.gene39635:CDS | 55.0% | |
| GGGAAGTCGGAAGCAACAAC+GGG | - | chr4.2:24595252-24595271 | None:intergenic | 55.0% | |
| GTCGGGGAGTTTAGGGAAGT+CGG | - | chr4.2:24595265-24595284 | None:intergenic | 55.0% | |
| TCTTGGGATGCCCCTTGAAC+TGG | - | chr4.2:24594121-24594140 | None:intergenic | 55.0% | |
| TGGCCTCTGTCTTTCCACGT+TGG | - | chr4.2:24595870-24595889 | None:intergenic | 55.0% | |
| ! | CAGTCCATACAAGGTGCCTC+TGG | - | chr4.2:24594883-24594902 | None:intergenic | 55.0% |
| !! | ATCAGATCCCTGGTTCGGCT+TGG | + | chr4.2:24595292-24595311 | MS.gene39635:intron | 55.0% |
| !! | ATCCCTGGTTCGGCTTGGAA+GGG | + | chr4.2:24595297-24595316 | MS.gene39635:intron | 55.0% |
| !! | CTTGCCAGAGGCACCTTGTA+TGG | + | chr4.2:24594876-24594895 | MS.gene39635:CDS | 55.0% |
| CTTGGAAGGGGAGATGGAGC+TGG | + | chr4.2:24595310-24595329 | MS.gene39635:intron | 60.0% | |
| GACCTTGAGGGGGATGACCA+TGG | - | chr4.2:24594026-24594045 | None:intergenic | 60.0% | |
| GCTCCAAGCCCCACAAGAGA+GGG | - | chr4.2:24595223-24595242 | None:intergenic | 60.0% | |
| GGTCATCCCCCTCAAGGTCA+AGG | + | chr4.2:24594027-24594046 | MS.gene39635:CDS | 60.0% | |
| GTGGCGTCTCCCTCTCTTGT+GGG | + | chr4.2:24595211-24595230 | MS.gene39635:intron | 60.0% | |
| TCCCCTTCCAAGCCGAACCA+GGG | - | chr4.2:24595302-24595321 | None:intergenic | 60.0% | |
| TCTCCCTCTCTTGTGGGGCT+TGG | + | chr4.2:24595217-24595236 | MS.gene39635:intron | 60.0% | |
| TGCTCCAAGCCCCACAAGAG+AGG | - | chr4.2:24595224-24595243 | None:intergenic | 60.0% | |
| TGGCGTCTCCCTCTCTTGTG+GGG | + | chr4.2:24595212-24595231 | MS.gene39635:intron | 60.0% | |
| TGTGGCGTCTCCCTCTCTTG+TGG | + | chr4.2:24595210-24595229 | MS.gene39635:intron | 60.0% | |
| ! | GGTGGTGCTAGTGCAACTCC+TGG | - | chr4.2:24595890-24595909 | None:intergenic | 60.0% |
| !! | AGGGCGTGGGAAGCACTTGA+GGG | + | chr4.2:24595355-24595374 | MS.gene39635:intron | 60.0% |
| !! | GATCCCTGGTTCGGCTTGGA+AGG | + | chr4.2:24595296-24595315 | MS.gene39635:intron | 60.0% |
| !! | GTTCGGCTTGGAAGGGGAGA+TGG | + | chr4.2:24595304-24595323 | MS.gene39635:intron | 60.0% |
| !! | TAGGGCGTGGGAAGCACTTG+AGG | + | chr4.2:24595354-24595373 | MS.gene39635:intron | 60.0% |
| !! | TCCCTGGTTCGGCTTGGAAG+GGG | + | chr4.2:24595298-24595317 | MS.gene39635:intron | 60.0% |
| CTCCCCTTCCAAGCCGAACC+AGG | - | chr4.2:24595303-24595322 | None:intergenic | 65.0% | |
| GGCCATGGTCATCCCCCTCA+AGG | + | chr4.2:24594021-24594040 | MS.gene39635:CDS | 65.0% | |
| ! | TGGGGCGCTACTGGCTGTGT+CGG | + | chr4.2:24594798-24594817 | MS.gene39635:CDS | 65.0% |
| ! | GGGGCGCTACTGGCTGTGTC+GGG | + | chr4.2:24594799-24594818 | MS.gene39635:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 24593946 | 24595934 | 24593946 | ID=MS.gene39635 |
| chr4.2 | mRNA | 24593946 | 24595934 | 24593946 | ID=MS.gene39635.t1;Parent=MS.gene39635 |
| chr4.2 | exon | 24593946 | 24594192 | 24593946 | ID=MS.gene39635.t1.exon1;Parent=MS.gene39635.t1 |
| chr4.2 | CDS | 24593946 | 24594192 | 24593946 | ID=cds.MS.gene39635.t1;Parent=MS.gene39635.t1 |
| chr4.2 | exon | 24594291 | 24594362 | 24594291 | ID=MS.gene39635.t1.exon2;Parent=MS.gene39635.t1 |
| chr4.2 | CDS | 24594291 | 24594362 | 24594291 | ID=cds.MS.gene39635.t1;Parent=MS.gene39635.t1 |
| chr4.2 | exon | 24594773 | 24594985 | 24594773 | ID=MS.gene39635.t1.exon3;Parent=MS.gene39635.t1 |
| chr4.2 | CDS | 24594773 | 24594985 | 24594773 | ID=cds.MS.gene39635.t1;Parent=MS.gene39635.t1 |
| chr4.2 | exon | 24595858 | 24595934 | 24595858 | ID=MS.gene39635.t1.exon4;Parent=MS.gene39635.t1 |
| chr4.2 | CDS | 24595858 | 24595934 | 24595858 | ID=cds.MS.gene39635.t1;Parent=MS.gene39635.t1 |
| Gene Sequence |
| Protein sequence |
