Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54290.t1 | XP_024631505.1 | 84.2 | 379 | 55 | 1 | 1 | 379 | 1 | 374 | 2.00E-162 | 582 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54290.t1 | Q700D9 | 61.4 | 83 | 32 | 0 | 74 | 156 | 3 | 85 | 2.9e-21 | 104.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54290.t1 | A0A072V3K0 | 84.2 | 379 | 55 | 1 | 1 | 379 | 1 | 374 | 1.4e-162 | 582.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene54290.t1 | TF | GARP-G2-like |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049171 | MS.gene54290 | -0.858594 | 7.40E-63 | -1.69E-46 |
MS.gene049217 | MS.gene54290 | -0.800072 | 1.71E-48 | -1.69E-46 |
MS.gene049222 | MS.gene54290 | -0.827012 | 1.98E-54 | -1.69E-46 |
MS.gene049232 | MS.gene54290 | -0.800364 | 1.49E-48 | -1.69E-46 |
MS.gene049285 | MS.gene54290 | -0.818199 | 2.22E-52 | -1.69E-46 |
MS.gene049320 | MS.gene54290 | -0.828259 | 9.93E-55 | -1.69E-46 |
MS.gene049633 | MS.gene54290 | -0.856052 | 4.18E-62 | -1.69E-46 |
MS.gene049634 | MS.gene54290 | 0.806239 | 9.06E-50 | -1.69E-46 |
MS.gene050163 | MS.gene54290 | -0.800118 | 1.67E-48 | -1.69E-46 |
MS.gene050165 | MS.gene54290 | -0.808156 | 3.56E-50 | -1.69E-46 |
MS.gene050170 | MS.gene54290 | -0.855487 | 6.10E-62 | -1.69E-46 |
MS.gene050323 | MS.gene54290 | -0.841368 | 4.96E-58 | -1.69E-46 |
MS.gene050381 | MS.gene54290 | 0.81407 | 1.86E-51 | -1.69E-46 |
MS.gene050444 | MS.gene54290 | -0.828807 | 7.32E-55 | -1.69E-46 |
MS.gene050496 | MS.gene54290 | -0.811439 | 7.00E-51 | -1.69E-46 |
MS.gene050504 | MS.gene54290 | -0.846259 | 2.43E-59 | -1.69E-46 |
MS.gene050518 | MS.gene54290 | -0.804652 | 1.95E-49 | -1.69E-46 |
MS.gene050577 | MS.gene54290 | -0.844973 | 5.42E-59 | -1.69E-46 |
MS.gene050612 | MS.gene54290 | -0.860802 | 1.60E-63 | -1.69E-46 |
MS.gene050675 | MS.gene54290 | -0.820799 | 5.67E-53 | -1.69E-46 |
MS.gene050699 | MS.gene54290 | -0.806931 | 6.47E-50 | -1.69E-46 |
MS.gene050772 | MS.gene54290 | -0.80274 | 4.86E-49 | -1.69E-46 |
MS.gene05080 | MS.gene54290 | -0.862318 | 5.52E-64 | -1.69E-46 |
MS.gene05081 | MS.gene54290 | -0.835724 | 1.42E-56 | -1.69E-46 |
MS.gene050868 | MS.gene54290 | -0.868716 | 5.31E-66 | -1.69E-46 |
MS.gene050871 | MS.gene54290 | -0.867764 | 1.08E-65 | -1.69E-46 |
MS.gene050904 | MS.gene54290 | -0.848952 | 4.42E-60 | -1.69E-46 |
MS.gene050986 | MS.gene54290 | -0.818468 | 1.93E-52 | -1.69E-46 |
MS.gene051044 | MS.gene54290 | 0.810598 | 1.06E-50 | -1.69E-46 |
MS.gene051127 | MS.gene54290 | 0.807478 | 4.96E-50 | -1.69E-46 |
MS.gene051138 | MS.gene54290 | 0.860205 | 2.43E-63 | -1.69E-46 |
MS.gene051268 | MS.gene54290 | -0.832631 | 8.47E-56 | -1.69E-46 |
MS.gene051317 | MS.gene54290 | -0.84201 | 3.36E-58 | -1.69E-46 |
MS.gene051439 | MS.gene54290 | 0.832942 | 7.09E-56 | -1.69E-46 |
MS.gene051617 | MS.gene54290 | -0.801478 | 8.84E-49 | -1.69E-46 |
MS.gene051651 | MS.gene54290 | 0.854279 | 1.37E-61 | -1.69E-46 |
MS.gene051838 | MS.gene54290 | -0.832974 | 6.96E-56 | -1.69E-46 |
MS.gene051874 | MS.gene54290 | -0.808855 | 2.52E-50 | -1.69E-46 |
MS.gene052100 | MS.gene54290 | -0.818877 | 1.56E-52 | -1.69E-46 |
MS.gene052129 | MS.gene54290 | 0.821427 | 4.06E-53 | -1.69E-46 |
MS.gene052164 | MS.gene54290 | -0.866736 | 2.29E-65 | -1.69E-46 |
MS.gene052211 | MS.gene54290 | 0.812054 | 5.14E-51 | -1.69E-46 |
MS.gene052482 | MS.gene54290 | -0.83302 | 6.78E-56 | -1.69E-46 |
MS.gene052486 | MS.gene54290 | -0.838688 | 2.48E-57 | -1.69E-46 |
MS.gene052494 | MS.gene54290 | 0.801648 | 8.15E-49 | -1.69E-46 |
MS.gene052503 | MS.gene54290 | -0.811751 | 5.99E-51 | -1.69E-46 |
MS.gene052606 | MS.gene54290 | 0.816659 | 4.93E-52 | -1.69E-46 |
MS.gene052802 | MS.gene54290 | 0.812751 | 3.62E-51 | -1.69E-46 |
MS.gene052823 | MS.gene54290 | -0.811118 | 8.22E-51 | -1.69E-46 |
MS.gene052825 | MS.gene54290 | -0.807696 | 4.46E-50 | -1.69E-46 |
MS.gene052870 | MS.gene54290 | -0.803157 | 3.98E-49 | -1.69E-46 |
MS.gene052872 | MS.gene54290 | -0.824359 | 8.43E-54 | -1.69E-46 |
MS.gene052966 | MS.gene54290 | -0.843948 | 1.02E-58 | -1.69E-46 |
MS.gene053203 | MS.gene54290 | -0.827212 | 1.77E-54 | -1.69E-46 |
MS.gene053420 | MS.gene54290 | 0.823624 | 1.25E-53 | -1.69E-46 |
MS.gene053479 | MS.gene54290 | -0.836378 | 9.69E-57 | -1.69E-46 |
MS.gene053480 | MS.gene54290 | -0.819958 | 8.84E-53 | -1.69E-46 |
MS.gene053574 | MS.gene54290 | -0.8064 | 8.38E-50 | -1.69E-46 |
MS.gene053626 | MS.gene54290 | -0.8033 | 3.72E-49 | -1.69E-46 |
MS.gene053632 | MS.gene54290 | -0.805308 | 1.42E-49 | -1.69E-46 |
MS.gene053824 | MS.gene54290 | -0.839144 | 1.89E-57 | -1.69E-46 |
MS.gene053916 | MS.gene54290 | -0.816456 | 5.48E-52 | -1.69E-46 |
MS.gene054344 | MS.gene54290 | -0.802675 | 5.01E-49 | -1.69E-46 |
MS.gene054595 | MS.gene54290 | -0.820528 | 6.54E-53 | -1.69E-46 |
MS.gene054642 | MS.gene54290 | -0.807481 | 4.95E-50 | -1.69E-46 |
MS.gene054706 | MS.gene54290 | 0.826636 | 2.43E-54 | -1.69E-46 |
MS.gene05470 | MS.gene54290 | -0.865517 | 5.58E-65 | -1.69E-46 |
MS.gene054884 | MS.gene54290 | 0.800538 | 1.38E-48 | -1.69E-46 |
MS.gene05494 | MS.gene54290 | -0.817651 | 2.95E-52 | -1.69E-46 |
MS.gene054954 | MS.gene54290 | -0.820327 | 7.27E-53 | -1.69E-46 |
MS.gene055154 | MS.gene54290 | 0.805202 | 1.50E-49 | -1.69E-46 |
MS.gene055362 | MS.gene54290 | -0.821052 | 4.96E-53 | -1.69E-46 |
MS.gene055502 | MS.gene54290 | -0.848747 | 5.03E-60 | -1.69E-46 |
MS.gene055577 | MS.gene54290 | -0.857147 | 1.99E-62 | -1.69E-46 |
MS.gene055748 | MS.gene54290 | -0.873504 | 1.40E-67 | -1.69E-46 |
MS.gene055750 | MS.gene54290 | -0.854879 | 9.17E-62 | -1.69E-46 |
MS.gene055751 | MS.gene54290 | -0.875056 | 4.16E-68 | -1.69E-46 |
MS.gene055776 | MS.gene54290 | -0.804771 | 1.84E-49 | -1.69E-46 |
MS.gene05589 | MS.gene54290 | -0.897547 | 1.27E-76 | -1.69E-46 |
MS.gene056166 | MS.gene54290 | -0.814739 | 1.32E-51 | -1.69E-46 |
MS.gene056224 | MS.gene54290 | 0.81078 | 9.72E-51 | -1.69E-46 |
MS.gene056283 | MS.gene54290 | -0.825552 | 4.40E-54 | -1.69E-46 |
MS.gene056387 | MS.gene54290 | -0.841968 | 3.44E-58 | -1.69E-46 |
MS.gene056504 | MS.gene54290 | -0.86302 | 3.35E-64 | -1.69E-46 |
MS.gene056510 | MS.gene54290 | -0.829834 | 4.12E-55 | -1.69E-46 |
MS.gene056657 | MS.gene54290 | -0.807963 | 3.91E-50 | -1.69E-46 |
MS.gene056692 | MS.gene54290 | -0.811462 | 6.92E-51 | -1.69E-46 |
MS.gene056694 | MS.gene54290 | 0.820579 | 6.37E-53 | -1.69E-46 |
MS.gene056697 | MS.gene54290 | 0.809637 | 1.72E-50 | -1.69E-46 |
MS.gene056856 | MS.gene54290 | 0.828823 | 7.26E-55 | -1.69E-46 |
MS.gene057076 | MS.gene54290 | -0.80259 | 5.22E-49 | -1.69E-46 |
MS.gene057086 | MS.gene54290 | -0.804204 | 2.42E-49 | -1.69E-46 |
MS.gene057293 | MS.gene54290 | 0.814612 | 1.41E-51 | -1.69E-46 |
MS.gene057658 | MS.gene54290 | -0.810195 | 1.30E-50 | -1.69E-46 |
MS.gene057717 | MS.gene54290 | 0.804238 | 2.38E-49 | -1.69E-46 |
MS.gene057831 | MS.gene54290 | -0.820808 | 5.64E-53 | -1.69E-46 |
MS.gene058068 | MS.gene54290 | 0.809037 | 2.31E-50 | -1.69E-46 |
MS.gene058117 | MS.gene54290 | 0.807723 | 4.40E-50 | -1.69E-46 |
MS.gene058171 | MS.gene54290 | 0.833943 | 3.99E-56 | -1.69E-46 |
MS.gene058173 | MS.gene54290 | 0.830773 | 2.43E-55 | -1.69E-46 |
MS.gene058175 | MS.gene54290 | 0.839723 | 1.34E-57 | -1.69E-46 |
MS.gene058334 | MS.gene54290 | 0.833135 | 6.35E-56 | -1.69E-46 |
MS.gene058338 | MS.gene54290 | -0.820744 | 5.83E-53 | -1.69E-46 |
MS.gene05837 | MS.gene54290 | -0.849648 | 2.83E-60 | -1.69E-46 |
MS.gene058419 | MS.gene54290 | -0.832404 | 9.64E-56 | -1.69E-46 |
MS.gene058544 | MS.gene54290 | -0.81935 | 1.22E-52 | -1.69E-46 |
MS.gene058603 | MS.gene54290 | 0.814748 | 1.32E-51 | -1.69E-46 |
MS.gene058773 | MS.gene54290 | -0.832847 | 7.48E-56 | -1.69E-46 |
MS.gene058838 | MS.gene54290 | -0.845463 | 4.00E-59 | -1.69E-46 |
MS.gene059022 | MS.gene54290 | -0.830853 | 2.32E-55 | -1.69E-46 |
MS.gene059023 | MS.gene54290 | -0.862342 | 5.42E-64 | -1.69E-46 |
MS.gene059045 | MS.gene54290 | 0.801725 | 7.86E-49 | -1.69E-46 |
MS.gene05913 | MS.gene54290 | -0.810531 | 1.10E-50 | -1.69E-46 |
MS.gene05914 | MS.gene54290 | -0.829222 | 5.81E-55 | -1.69E-46 |
MS.gene05960 | MS.gene54290 | 0.807149 | 5.82E-50 | -1.69E-46 |
MS.gene059667 | MS.gene54290 | -0.823191 | 1.58E-53 | -1.69E-46 |
MS.gene059677 | MS.gene54290 | -0.820713 | 5.93E-53 | -1.69E-46 |
MS.gene059718 | MS.gene54290 | -0.815457 | 9.16E-52 | -1.69E-46 |
MS.gene059865 | MS.gene54290 | -0.861232 | 1.19E-63 | -1.69E-46 |
MS.gene06000 | MS.gene54290 | -0.846425 | 2.19E-59 | -1.69E-46 |
MS.gene060087 | MS.gene54290 | 0.804694 | 1.91E-49 | -1.69E-46 |
MS.gene06027 | MS.gene54290 | -0.804506 | 2.09E-49 | -1.69E-46 |
MS.gene060405 | MS.gene54290 | 0.817026 | 4.08E-52 | -1.69E-46 |
MS.gene060762 | MS.gene54290 | -0.858865 | 6.14E-63 | -1.69E-46 |
MS.gene060778 | MS.gene54290 | -0.834861 | 2.35E-56 | -1.69E-46 |
MS.gene06077 | MS.gene54290 | -0.84681 | 1.72E-59 | -1.69E-46 |
MS.gene06084 | MS.gene54290 | 0.802629 | 5.12E-49 | -1.69E-46 |
MS.gene060982 | MS.gene54290 | -0.872323 | 3.47E-67 | -1.69E-46 |
MS.gene061044 | MS.gene54290 | 0.874322 | 7.39E-68 | -1.69E-46 |
MS.gene061150 | MS.gene54290 | -0.800446 | 1.44E-48 | -1.69E-46 |
MS.gene061231 | MS.gene54290 | -0.804062 | 2.59E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54290.t1 | MTR_2g016220 | 87.173 | 382 | 38 | 3 | 1 | 379 | 1 | 374 | 0.0 | 667 |
MS.gene54290.t1 | MTR_2g016220 | 86.269 | 386 | 38 | 4 | 1 | 379 | 1 | 378 | 0.0 | 661 |
MS.gene54290.t1 | MTR_2g016220 | 86.968 | 376 | 38 | 3 | 1 | 373 | 1 | 368 | 0.0 | 656 |
MS.gene54290.t1 | MTR_8g086410 | 44.811 | 424 | 145 | 12 | 25 | 379 | 23 | 426 | 1.20e-91 | 281 |
MS.gene54290.t1 | MTR_8g086410 | 44.811 | 424 | 145 | 12 | 25 | 379 | 25 | 428 | 1.51e-91 | 281 |
MS.gene54290.t1 | MTR_8g086410 | 44.084 | 431 | 145 | 13 | 25 | 379 | 25 | 435 | 9.16e-89 | 275 |
MS.gene54290.t1 | MTR_2g084230 | 55.618 | 178 | 59 | 6 | 34 | 195 | 35 | 208 | 5.12e-46 | 160 |
MS.gene54290.t1 | MTR_2g084230 | 55.618 | 178 | 59 | 6 | 34 | 195 | 35 | 208 | 1.86e-45 | 160 |
MS.gene54290.t1 | MTR_7g069660 | 53.237 | 139 | 54 | 3 | 22 | 158 | 6 | 135 | 1.26e-35 | 134 |
MS.gene54290.t1 | MTR_0223s0040 | 63.095 | 84 | 26 | 1 | 82 | 165 | 6 | 84 | 1.76e-29 | 115 |
MS.gene54290.t1 | MTR_2g023580 | 72.464 | 69 | 19 | 0 | 86 | 154 | 47 | 115 | 4.78e-29 | 113 |
MS.gene54290.t1 | MTR_1g112370 | 64.198 | 81 | 25 | 2 | 76 | 156 | 7 | 83 | 4.98e-28 | 112 |
MS.gene54290.t1 | MTR_3g450310 | 55.405 | 74 | 33 | 0 | 77 | 150 | 2 | 75 | 9.52e-23 | 95.5 |
MS.gene54290.t1 | MTR_1g021520 | 57.500 | 80 | 29 | 2 | 86 | 162 | 120 | 197 | 1.77e-19 | 88.2 |
MS.gene54290.t1 | MTR_1g080330 | 56.579 | 76 | 32 | 1 | 75 | 150 | 157 | 231 | 2.30e-19 | 87.8 |
MS.gene54290.t1 | MTR_1g080330 | 56.579 | 76 | 32 | 1 | 75 | 150 | 157 | 231 | 3.55e-19 | 88.6 |
MS.gene54290.t1 | MTR_7g098250 | 67.857 | 56 | 18 | 0 | 95 | 150 | 263 | 318 | 4.04e-19 | 89.0 |
MS.gene54290.t1 | MTR_6g071625 | 65.517 | 58 | 20 | 0 | 93 | 150 | 201 | 258 | 5.35e-19 | 87.8 |
MS.gene54290.t1 | MTR_7g115530 | 66.071 | 56 | 19 | 0 | 95 | 150 | 219 | 274 | 5.42e-19 | 87.0 |
MS.gene54290.t1 | MTR_7g115530 | 66.071 | 56 | 19 | 0 | 95 | 150 | 219 | 274 | 1.14e-18 | 86.3 |
MS.gene54290.t1 | MTR_7g115530 | 66.071 | 56 | 19 | 0 | 95 | 150 | 219 | 274 | 1.38e-18 | 87.4 |
MS.gene54290.t1 | MTR_7g115530 | 66.071 | 56 | 19 | 0 | 95 | 150 | 219 | 274 | 1.90e-18 | 85.9 |
MS.gene54290.t1 | MTR_8g066310 | 50.602 | 83 | 32 | 1 | 93 | 175 | 172 | 245 | 2.58e-18 | 85.9 |
MS.gene54290.t1 | MTR_5g029470 | 58.571 | 70 | 28 | 1 | 93 | 161 | 218 | 287 | 2.74e-18 | 86.3 |
MS.gene54290.t1 | MTR_3g064840 | 65.517 | 58 | 20 | 0 | 93 | 150 | 273 | 330 | 4.84e-18 | 85.9 |
MS.gene54290.t1 | MTR_7g115530 | 64.286 | 56 | 20 | 0 | 95 | 150 | 219 | 274 | 4.17e-17 | 80.9 |
MS.gene54290.t1 | MTR_7g115530 | 67.308 | 52 | 17 | 0 | 95 | 146 | 219 | 270 | 5.26e-17 | 80.9 |
MS.gene54290.t1 | MTR_7g093030 | 54.839 | 62 | 28 | 0 | 90 | 151 | 208 | 269 | 1.36e-16 | 79.7 |
MS.gene54290.t1 | MTR_7g093030 | 54.839 | 62 | 28 | 0 | 90 | 151 | 208 | 269 | 2.94e-16 | 80.1 |
MS.gene54290.t1 | MTR_6g032990 | 60.377 | 53 | 21 | 0 | 95 | 147 | 43 | 95 | 4.77e-16 | 79.3 |
MS.gene54290.t1 | MTR_5g027440 | 49.315 | 73 | 37 | 0 | 75 | 147 | 6 | 78 | 6.75e-16 | 77.4 |
MS.gene54290.t1 | MTR_1g053835 | 51.250 | 80 | 35 | 2 | 71 | 150 | 239 | 314 | 7.26e-16 | 79.0 |
MS.gene54290.t1 | MTR_5g041350 | 50.769 | 65 | 30 | 1 | 88 | 150 | 7 | 71 | 9.32e-16 | 78.2 |
MS.gene54290.t1 | MTR_2g086450 | 57.143 | 56 | 24 | 0 | 95 | 150 | 46 | 101 | 1.18e-15 | 78.2 |
MS.gene54290.t1 | MTR_2g027860 | 65.455 | 55 | 19 | 0 | 96 | 150 | 51 | 105 | 2.44e-15 | 76.6 |
MS.gene54290.t1 | MTR_7g088070 | 61.818 | 55 | 21 | 0 | 96 | 150 | 52 | 106 | 3.30e-15 | 75.5 |
MS.gene54290.t1 | MTR_7g088070 | 61.818 | 55 | 21 | 0 | 96 | 150 | 52 | 106 | 3.65e-15 | 75.5 |
MS.gene54290.t1 | MTR_1g053830 | 54.545 | 55 | 25 | 0 | 96 | 150 | 20 | 74 | 5.00e-15 | 70.9 |
MS.gene54290.t1 | MTR_1g090670 | 57.143 | 56 | 24 | 0 | 95 | 150 | 45 | 100 | 1.69e-14 | 73.9 |
MS.gene54290.t1 | MTR_2g027800 | 57.143 | 56 | 24 | 0 | 95 | 150 | 40 | 95 | 2.08e-14 | 73.6 |
MS.gene54290.t1 | MTR_2g027800 | 58.491 | 53 | 22 | 0 | 95 | 147 | 40 | 92 | 3.60e-14 | 72.8 |
MS.gene54290.t1 | MTR_6g444980 | 55.357 | 56 | 25 | 0 | 95 | 150 | 36 | 91 | 3.64e-14 | 73.6 |
MS.gene54290.t1 | MTR_6g444980 | 55.357 | 56 | 25 | 0 | 95 | 150 | 36 | 91 | 4.03e-14 | 73.2 |
MS.gene54290.t1 | MTR_1g053800 | 60.377 | 53 | 21 | 0 | 96 | 148 | 179 | 231 | 4.72e-14 | 72.8 |
MS.gene54290.t1 | MTR_4g021790 | 46.667 | 75 | 36 | 2 | 73 | 147 | 150 | 220 | 6.40e-14 | 71.6 |
MS.gene54290.t1 | MTR_4g081710 | 53.571 | 56 | 26 | 0 | 95 | 150 | 18 | 73 | 7.10e-14 | 72.4 |
MS.gene54290.t1 | MTR_7g068600 | 59.322 | 59 | 21 | 1 | 96 | 151 | 15 | 73 | 7.45e-14 | 70.9 |
MS.gene54290.t1 | MTR_4g021855 | 45.946 | 74 | 34 | 2 | 74 | 147 | 153 | 220 | 1.24e-12 | 68.2 |
MS.gene54290.t1 | MTR_7g093010 | 56.604 | 53 | 23 | 0 | 96 | 148 | 215 | 267 | 1.17e-11 | 65.9 |
MS.gene54290.t1 | MTR_2g450070 | 52.727 | 55 | 25 | 1 | 93 | 147 | 212 | 265 | 3.56e-11 | 65.1 |
MS.gene54290.t1 | MTR_2g450070 | 52.727 | 55 | 25 | 1 | 93 | 147 | 212 | 265 | 3.59e-11 | 65.1 |
MS.gene54290.t1 | MTR_4g121020 | 54.545 | 55 | 24 | 1 | 93 | 147 | 110 | 163 | 6.03e-11 | 64.3 |
MS.gene54290.t1 | MTR_4g121020 | 54.545 | 55 | 24 | 1 | 93 | 147 | 214 | 267 | 6.77e-11 | 64.3 |
MS.gene54290.t1 | MTR_4g121020 | 54.545 | 55 | 24 | 1 | 93 | 147 | 214 | 267 | 6.89e-11 | 64.3 |
MS.gene54290.t1 | MTR_1g032570 | 33.898 | 118 | 49 | 3 | 58 | 147 | 67 | 183 | 7.56e-11 | 63.9 |
MS.gene54290.t1 | MTR_1g032570 | 33.898 | 118 | 49 | 3 | 58 | 147 | 136 | 252 | 9.18e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54290.t1 | AT2G38300 | 68.750 | 80 | 25 | 0 | 80 | 159 | 40 | 119 | 7.22e-33 | 126 |
MS.gene54290.t1 | AT2G40260 | 77.333 | 75 | 17 | 0 | 79 | 153 | 67 | 141 | 8.66e-31 | 121 |
MS.gene54290.t1 | AT2G42660 | 76.119 | 67 | 16 | 0 | 86 | 152 | 42 | 108 | 8.23e-30 | 115 |
MS.gene54290.t1 | AT4G04605 | 62.353 | 85 | 32 | 0 | 86 | 170 | 6 | 90 | 4.07e-29 | 112 |
MS.gene54290.t1 | AT1G14600 | 61.446 | 83 | 32 | 0 | 74 | 156 | 3 | 85 | 1.73e-28 | 112 |
MS.gene54290.t1 | AT2G02060 | 61.728 | 81 | 27 | 1 | 71 | 147 | 2 | 82 | 4.15e-26 | 105 |
MS.gene54290.t1 | AT2G02060 | 61.728 | 81 | 27 | 1 | 71 | 147 | 2 | 82 | 4.15e-26 | 105 |
MS.gene54290.t1 | AT4G04580 | 50.617 | 81 | 40 | 0 | 86 | 166 | 6 | 86 | 3.34e-20 | 87.0 |
MS.gene54290.t1 | AT5G42630 | 63.492 | 63 | 23 | 0 | 93 | 155 | 104 | 166 | 1.97e-19 | 86.7 |
MS.gene54290.t1 | AT5G42630 | 63.492 | 63 | 23 | 0 | 93 | 155 | 104 | 166 | 2.07e-19 | 87.8 |
MS.gene54290.t1 | AT4G04555 | 56.944 | 72 | 30 | 1 | 83 | 153 | 2 | 73 | 2.11e-19 | 83.2 |
MS.gene54290.t1 | AT4G17695 | 57.534 | 73 | 26 | 1 | 93 | 160 | 163 | 235 | 3.33e-18 | 85.1 |
MS.gene54290.t1 | AT1G32240 | 65.517 | 58 | 20 | 0 | 93 | 150 | 212 | 269 | 3.40e-18 | 85.5 |
MS.gene54290.t1 | AT1G32240 | 65.517 | 58 | 20 | 0 | 93 | 150 | 212 | 269 | 3.97e-18 | 85.5 |
MS.gene54290.t1 | AT5G16560 | 65.517 | 58 | 20 | 0 | 93 | 150 | 218 | 275 | 4.13e-18 | 85.5 |
MS.gene54290.t1 | AT4G28610 | 65.455 | 55 | 19 | 0 | 96 | 150 | 227 | 281 | 1.63e-17 | 84.0 |
MS.gene54290.t1 | AT3G04450 | 61.818 | 55 | 21 | 0 | 96 | 150 | 240 | 294 | 2.65e-17 | 82.4 |
MS.gene54290.t1 | AT5G29000 | 65.455 | 55 | 19 | 0 | 96 | 150 | 190 | 244 | 2.83e-17 | 82.8 |
MS.gene54290.t1 | AT5G29000 | 65.455 | 55 | 19 | 0 | 96 | 150 | 190 | 244 | 2.83e-17 | 82.8 |
MS.gene54290.t1 | AT3G04450 | 61.818 | 55 | 21 | 0 | 96 | 150 | 200 | 254 | 3.17e-17 | 83.2 |
MS.gene54290.t1 | AT3G04450 | 61.818 | 55 | 21 | 0 | 96 | 150 | 200 | 254 | 3.17e-17 | 83.2 |
MS.gene54290.t1 | AT5G29000 | 60.656 | 61 | 24 | 0 | 90 | 150 | 227 | 287 | 3.56e-17 | 82.0 |
MS.gene54290.t1 | AT3G04450 | 61.818 | 55 | 21 | 0 | 96 | 150 | 240 | 294 | 3.60e-17 | 83.2 |
MS.gene54290.t1 | AT5G29000 | 60.656 | 61 | 24 | 0 | 90 | 150 | 227 | 287 | 3.67e-17 | 82.8 |
MS.gene54290.t1 | AT3G13040 | 67.273 | 55 | 18 | 0 | 96 | 150 | 243 | 297 | 2.53e-16 | 80.5 |
MS.gene54290.t1 | AT3G13040 | 67.273 | 55 | 18 | 0 | 96 | 150 | 243 | 297 | 2.53e-16 | 80.5 |
MS.gene54290.t1 | AT3G13040 | 67.273 | 55 | 18 | 0 | 96 | 150 | 243 | 297 | 2.53e-16 | 80.5 |
MS.gene54290.t1 | AT5G45580 | 56.897 | 58 | 25 | 0 | 90 | 147 | 3 | 60 | 3.41e-16 | 78.2 |
MS.gene54290.t1 | AT5G45580 | 56.897 | 58 | 25 | 0 | 90 | 147 | 19 | 76 | 4.20e-16 | 78.2 |
MS.gene54290.t1 | AT3G12730 | 38.739 | 111 | 59 | 3 | 95 | 201 | 24 | 129 | 1.20e-15 | 76.3 |
MS.gene54290.t1 | AT2G01060 | 65.455 | 55 | 19 | 0 | 96 | 150 | 17 | 71 | 1.28e-15 | 77.0 |
MS.gene54290.t1 | AT1G79430 | 40.777 | 103 | 51 | 3 | 95 | 195 | 35 | 129 | 1.49e-15 | 77.8 |
MS.gene54290.t1 | AT3G04030 | 53.571 | 56 | 26 | 0 | 95 | 150 | 46 | 101 | 2.29e-15 | 77.4 |
MS.gene54290.t1 | AT3G04030 | 53.571 | 56 | 26 | 0 | 95 | 150 | 46 | 101 | 2.76e-15 | 77.0 |
MS.gene54290.t1 | AT2G06020 | 32.065 | 184 | 108 | 6 | 51 | 218 | 39 | 221 | 4.67e-15 | 75.5 |
MS.gene54290.t1 | AT2G20400 | 63.636 | 55 | 20 | 0 | 96 | 150 | 233 | 287 | 4.85e-15 | 76.3 |
MS.gene54290.t1 | AT2G20400 | 63.636 | 55 | 20 | 0 | 96 | 150 | 233 | 287 | 5.30e-15 | 76.3 |
MS.gene54290.t1 | AT5G18240 | 53.571 | 56 | 26 | 0 | 95 | 150 | 46 | 101 | 7.61e-15 | 75.9 |
MS.gene54290.t1 | AT5G18240 | 53.571 | 56 | 26 | 0 | 95 | 150 | 46 | 101 | 7.61e-15 | 75.9 |
MS.gene54290.t1 | AT5G18240 | 53.571 | 56 | 26 | 0 | 95 | 150 | 46 | 101 | 8.05e-15 | 75.9 |
MS.gene54290.t1 | AT5G18240 | 53.571 | 56 | 26 | 0 | 95 | 150 | 46 | 101 | 8.05e-15 | 75.9 |
MS.gene54290.t1 | AT5G18240 | 53.571 | 56 | 26 | 0 | 95 | 150 | 46 | 101 | 8.35e-15 | 75.9 |
MS.gene54290.t1 | AT4G13640 | 56.604 | 53 | 23 | 0 | 95 | 147 | 38 | 90 | 1.35e-14 | 73.9 |
MS.gene54290.t1 | AT4G13640 | 56.604 | 53 | 23 | 0 | 95 | 147 | 38 | 90 | 1.42e-14 | 73.9 |
MS.gene54290.t1 | AT3G24120 | 56.604 | 53 | 23 | 0 | 95 | 147 | 42 | 94 | 1.63e-14 | 73.9 |
MS.gene54290.t1 | AT3G24120 | 56.604 | 53 | 23 | 0 | 95 | 147 | 42 | 94 | 1.65e-14 | 73.9 |
MS.gene54290.t1 | AT5G06800 | 56.364 | 55 | 24 | 0 | 96 | 150 | 194 | 248 | 3.22e-14 | 72.8 |
MS.gene54290.t1 | AT1G69580 | 51.667 | 60 | 29 | 0 | 95 | 154 | 35 | 94 | 5.93e-14 | 72.8 |
MS.gene54290.t1 | AT1G69580 | 51.667 | 60 | 29 | 0 | 95 | 154 | 35 | 94 | 6.15e-14 | 72.8 |
MS.gene54290.t1 | AT5G06800 | 50.769 | 65 | 31 | 1 | 96 | 159 | 194 | 258 | 7.65e-14 | 72.8 |
MS.gene54290.t1 | AT5G06800 | 56.364 | 55 | 24 | 0 | 96 | 150 | 194 | 248 | 9.46e-14 | 72.4 |
MS.gene54290.t1 | AT3G04030 | 51.786 | 56 | 26 | 1 | 95 | 150 | 46 | 100 | 6.81e-13 | 69.7 |
MS.gene54290.t1 | AT3G62670 | 53.333 | 60 | 24 | 1 | 92 | 147 | 209 | 268 | 2.14e-12 | 68.6 |
MS.gene54290.t1 | AT5G59570 | 55.357 | 56 | 24 | 1 | 92 | 147 | 139 | 193 | 8.42e-12 | 65.9 |
MS.gene54290.t1 | AT5G59570 | 55.357 | 56 | 24 | 1 | 92 | 147 | 139 | 193 | 8.42e-12 | 65.9 |
MS.gene54290.t1 | AT3G46640 | 54.545 | 55 | 24 | 1 | 93 | 147 | 143 | 196 | 4.48e-11 | 63.9 |
MS.gene54290.t1 | AT3G46640 | 54.545 | 55 | 24 | 1 | 93 | 147 | 143 | 196 | 4.48e-11 | 63.9 |
MS.gene54290.t1 | AT4G37180 | 51.667 | 60 | 29 | 0 | 88 | 147 | 204 | 263 | 4.59e-11 | 63.9 |
MS.gene54290.t1 | AT1G25550 | 38.596 | 114 | 57 | 2 | 96 | 209 | 211 | 311 | 4.91e-11 | 63.9 |
MS.gene54290.t1 | AT4G37180 | 51.667 | 60 | 29 | 0 | 88 | 147 | 211 | 270 | 5.23e-11 | 63.9 |
MS.gene54290.t1 | AT3G46640 | 54.545 | 55 | 24 | 1 | 93 | 147 | 143 | 196 | 5.52e-11 | 63.5 |
MS.gene54290.t1 | AT3G16857 | 43.678 | 87 | 45 | 2 | 64 | 147 | 134 | 219 | 9.65e-11 | 63.9 |
Find 68 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCAAGTATTGTTGCTTCA+TGG | 0.216171 | 2.3:-69260897 | None:intergenic |
GGAAGAGTTGCAAGGTTCTT+TGG | 0.287029 | 2.3:-69264189 | None:intergenic |
AGCAAGAAACTTGACGAGTT+TGG | 0.326402 | 2.3:+69261622 | MS.gene54290:CDS |
CTTGTGTTGACCTCTGTGTT+TGG | 0.327855 | 2.3:-69263192 | None:intergenic |
ATGATCAATCTTACCATCAT+TGG | 0.345938 | 2.3:-69264437 | None:intergenic |
CTCAAACCTAGTTGCAAATC+AGG | 0.351771 | 2.3:-69264400 | None:intergenic |
TTCCATTCAACTTTCTCAAT+AGG | 0.352795 | 2.3:-69264119 | None:intergenic |
AGAAGGAAGGGCATGGCTGC+AGG | 0.377318 | 2.3:-69263333 | None:intergenic |
GATGAAAGTAATACTTCATC+TGG | 0.379913 | 2.3:+69260820 | MS.gene54290:CDS |
TCATGTCAAGTCTCACTTGC+AGG | 0.383436 | 2.3:+69261256 | MS.gene54290:CDS |
AATGTTACCTTGATCCGAAA+TGG | 0.391625 | 2.3:-69264239 | None:intergenic |
TAGCTTAGTGCTAATTTCCT+TGG | 0.409360 | 2.3:-69264470 | None:intergenic |
TGAAGCCCCATTTCGGATCA+AGG | 0.411464 | 2.3:+69264232 | MS.gene54290:CDS |
ATGTTACCTTGATCCGAAAT+GGG | 0.413170 | 2.3:-69264238 | None:intergenic |
CAACTCATCATTATGATTCA+AGG | 0.416320 | 2.3:+69263386 | MS.gene54290:CDS |
TCTGTGAATAATTACGAGAT+AGG | 0.420426 | 2.3:-69263357 | None:intergenic |
CCAATGTAACTTCTAAAACT+TGG | 0.423539 | 2.3:+69264090 | MS.gene54290:CDS |
CCACCTTAACCTAGGCATCT+TGG | 0.426029 | 2.3:-69261031 | None:intergenic |
CATTAGCTGAAGCACCAACT+TGG | 0.437054 | 2.3:-69261210 | None:intergenic |
CATGAACAATATTCATCAAC+CGG | 0.438171 | 2.3:+69264049 | MS.gene54290:CDS |
AGAAATTGGGTTGGTGTCAC+GGG | 0.446810 | 2.3:-69263996 | None:intergenic |
GATCCAAGATGCCTAGGTTA+AGG | 0.450407 | 2.3:+69261028 | MS.gene54290:CDS |
TTCTTGCCTGATTTGCAACT+AGG | 0.451466 | 2.3:+69264394 | MS.gene54290:CDS |
ATATTGTTCATGATTTCAAA+TGG | 0.455511 | 2.3:-69264038 | None:intergenic |
AAGAAATTGGGTTGGTGTCA+CGG | 0.469951 | 2.3:-69263997 | None:intergenic |
CATGCTGTTGATAGACTTGG+TGG | 0.470120 | 2.3:+69261081 | MS.gene54290:CDS |
TACTTTCATCAACAAGCTGC+AGG | 0.473446 | 2.3:-69260807 | None:intergenic |
TTCATCAACCGGAATTCAAA+AGG | 0.482722 | 2.3:+69264060 | MS.gene54290:CDS |
CTAGGTTTGAGTCACACATA+TGG | 0.486414 | 2.3:+69264412 | MS.gene54290:CDS |
CAACATTTCAAGATGGGTAA+TGG | 0.492659 | 2.3:+69263247 | MS.gene54290:CDS |
AATGAGAAGGAAAATATTGA+AGG | 0.500567 | 2.3:+69260946 | MS.gene54290:CDS |
TTGCATGCTGTTGATAGACT+TGG | 0.505073 | 2.3:+69261078 | MS.gene54290:CDS |
GGGCATGGCTGCAGGAGAGT+TGG | 0.508149 | 2.3:-69263325 | None:intergenic |
CTTCAGCTAATGAATGTAAG+AGG | 0.513801 | 2.3:+69261221 | MS.gene54290:CDS |
CACACATATGGAACCAATGA+TGG | 0.515353 | 2.3:+69264424 | MS.gene54290:CDS |
AACCTATTGAGAAAGTTGAA+TGG | 0.520109 | 2.3:+69264117 | MS.gene54290:CDS |
TCTAAGTCAACATTTCAAGA+TGG | 0.523487 | 2.3:+69263240 | MS.gene54290:CDS |
CTAAGTCAACATTTCAAGAT+GGG | 0.525690 | 2.3:+69263241 | MS.gene54290:CDS |
TTCTCTTCAAGAAATTGGGT+TGG | 0.528659 | 2.3:-69264005 | None:intergenic |
GAAGGAAATAATGAAAGAAG+AGG | 0.529416 | 2.3:+69260985 | MS.gene54290:CDS |
ATGTTAGATCCAAGATGCCT+AGG | 0.541984 | 2.3:+69261022 | MS.gene54290:CDS |
ATTAGCTGAAGCACCAACTT+GGG | 0.542418 | 2.3:-69261209 | None:intergenic |
GCTACAAACATGTCAGAAGA+AGG | 0.543883 | 2.3:+69260748 | None:intergenic |
CTGTGAATAATTACGAGATA+GGG | 0.547778 | 2.3:-69263356 | None:intergenic |
AAAATGTAGCAATAAACTTG+TGG | 0.560518 | 2.3:-69264210 | None:intergenic |
GGTAATTGTAGATCAAGAGA+AGG | 0.560724 | 2.3:+69260967 | MS.gene54290:CDS |
TGCAGGAGCAACACCCAAGT+TGG | 0.569639 | 2.3:+69261196 | MS.gene54290:intron |
AAATAATGAAAGAAGAGGCA+AGG | 0.577829 | 2.3:+69260990 | MS.gene54290:CDS |
GAACGAGAATGAGAATGAGA+AGG | 0.578160 | 2.3:+69260933 | MS.gene54290:CDS |
CCAAGATGCCTAGGTTAAGG+TGG | 0.584488 | 2.3:+69261031 | MS.gene54290:CDS |
ATAATTACGAGATAGGGAGA+AGG | 0.593369 | 2.3:-69263350 | None:intergenic |
CAGAGGTCAACACAAGAAGT+TGG | 0.594613 | 2.3:+69263199 | MS.gene54290:CDS |
TGATCTCTAGGCACCAACAT+TGG | 0.600420 | 2.3:+69263943 | MS.gene54290:intron |
TACGAGATAGGGAGAAGGAA+GGG | 0.601154 | 2.3:-69263345 | None:intergenic |
AAACTTGTGGAAGAGTTGCA+AGG | 0.606173 | 2.3:-69264197 | None:intergenic |
CATTTCAAGATGGGTAATGG+TGG | 0.608538 | 2.3:+69263250 | MS.gene54290:CDS |
TGATCATTGCAGAGAGACCA+AGG | 0.608794 | 2.3:+69264453 | MS.gene54290:CDS |
TAACAATTATATTCAGAGTG+AGG | 0.608803 | 2.3:+69260783 | MS.gene54290:CDS |
TGTTACCTTGATCCGAAATG+GGG | 0.609773 | 2.3:-69264237 | None:intergenic |
GATGATTGAAGTGCCAATGT+TGG | 0.609822 | 2.3:-69263956 | None:intergenic |
AAACTTGACGAGTTTGGACA+AGG | 0.614003 | 2.3:+69261628 | MS.gene54290:CDS |
TTACGAGATAGGGAGAAGGA+AGG | 0.615300 | 2.3:-69263346 | None:intergenic |
TCAGGAGTCCACCTTAACCT+AGG | 0.637415 | 2.3:-69261039 | None:intergenic |
CCATGAAGCAACAATACTTG+AGG | 0.647167 | 2.3:+69260897 | MS.gene54290:CDS |
GATAGGGAGAAGGAAGGGCA+TGG | 0.651977 | 2.3:-69263340 | None:intergenic |
GTCACGGGTGCAAATCTGAA+AGG | 0.667252 | 2.3:-69263981 | None:intergenic |
AGGAGAGTTGGATAATACTG+AGG | 0.696332 | 2.3:-69263313 | None:intergenic |
CAGTACTATGCCAAACACAG+AGG | 0.729891 | 2.3:+69263182 | MS.gene54290:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATAGTGAAAATTAATATT+TGG | + | chr2.3:69261162-69261181 | MS.gene54290:intron | 10.0% |
!! | GATTAATACAATTAAAATAT+AGG | - | chr2.3:69263554-69263573 | None:intergenic | 10.0% |
!!! | AGTTTTAATATTTACTTTAT+GGG | + | chr2.3:69261975-69261994 | MS.gene54290:intron | 10.0% |
!!! | CTAAATTTAAAGTTTTAAAA+TGG | - | chr2.3:69263845-69263864 | None:intergenic | 10.0% |
!!! | TTTATTACAATTTTTGTATT+TGG | + | chr2.3:69263096-69263115 | MS.gene54290:intron | 10.0% |
!! | AAAAAATAAAACTATACATC+CGG | + | chr2.3:69262945-69262964 | MS.gene54290:intron | 15.0% |
!! | AAGTAAATATTAAAACTCAA+TGG | - | chr2.3:69261972-69261991 | None:intergenic | 15.0% |
!! | TTGTAATAAATACATTTCAT+AGG | - | chr2.3:69263086-69263105 | None:intergenic | 15.0% |
!!! | AAATTGTTATCAAAATTTTG+CGG | + | chr2.3:69261708-69261727 | MS.gene54290:intron | 15.0% |
!!! | AATTTTGATAACAATTTTTG+AGG | - | chr2.3:69261705-69261724 | None:intergenic | 15.0% |
!!! | AGTTTATTTTCTTTTTAATG+TGG | - | chr2.3:69262680-69262699 | None:intergenic | 15.0% |
!!! | ATAATCATTAGATTATTTTG+TGG | - | chr2.3:69261577-69261596 | None:intergenic | 15.0% |
!!! | CAATTTTGTATTCATTTTTT+TGG | - | chr2.3:69261664-69261683 | None:intergenic | 15.0% |
!!! | GAGTTTTAATATTTACTTTA+TGG | + | chr2.3:69261974-69261993 | MS.gene54290:intron | 15.0% |
!!! | GATGTATAGTTTTATTTTTT+TGG | - | chr2.3:69262945-69262964 | None:intergenic | 15.0% |
!!! | TAATCATTAGATTATTTTGT+GGG | - | chr2.3:69261576-69261595 | None:intergenic | 15.0% |
!!! | TATAGTTTTATTTTTTTGGT+TGG | - | chr2.3:69262941-69262960 | None:intergenic | 15.0% |
!!! | TTTCTCATTTTATATATTGA+TGG | - | chr2.3:69262365-69262384 | None:intergenic | 15.0% |
!! | AATCACAAGAATATTTACTA+TGG | - | chr2.3:69262172-69262191 | None:intergenic | 20.0% |
!! | AATTTCATTTAGTAAATGGT+AGG | - | chr2.3:69263528-69263547 | None:intergenic | 20.0% |
!! | AATTTCTTGAAGAGAAAAAT+TGG | + | chr2.3:69264012-69264031 | MS.gene54290:CDS | 20.0% |
!! | ATATTCGAAAGAAATTCTAA+AGG | - | chr2.3:69262298-69262317 | None:intergenic | 20.0% |
!! | ATATTGTTCATGATTTCAAA+TGG | - | chr2.3:69264041-69264060 | None:intergenic | 20.0% |
!! | CAAAACAACAATATCTAAAA+AGG | + | chr2.3:69263020-69263039 | MS.gene54290:intron | 20.0% |
!! | GGTTAATTTCATTTAGTAAA+TGG | - | chr2.3:69263532-69263551 | None:intergenic | 20.0% |
!! | GTAAAAAAAGAAATGAAAGT+TGG | + | chr2.3:69263755-69263774 | MS.gene54290:intron | 20.0% |
!! | TCTTAAACTTCAATTTATTG+TGG | - | chr2.3:69261284-69261303 | None:intergenic | 20.0% |
!! | TTATATGAGAAACTCTTATT+TGG | - | chr2.3:69262539-69262558 | None:intergenic | 20.0% |
!!! | AATGCAAAATTGCTTATTTT+GGG | - | chr2.3:69262039-69262058 | None:intergenic | 20.0% |
!!! | AATTTTTCTCTTCAAGAAAT+TGG | - | chr2.3:69264013-69264032 | None:intergenic | 20.0% |
!!! | AGTGTAATAAATTTTGCTTA+TGG | - | chr2.3:69261544-69261563 | None:intergenic | 20.0% |
!!! | ATTTTTCTCTTCAAGAAATT+GGG | - | chr2.3:69264012-69264031 | None:intergenic | 20.0% |
!!! | TGAAGATTTTTTTATCTCAA+CGG | - | chr2.3:69261490-69261509 | None:intergenic | 20.0% |
!!! | TGTAGTTTTTTTTTTCTTCT+TGG | + | chr2.3:69262237-69262256 | MS.gene54290:intron | 20.0% |
!!! | TTTGTATTCATTTTTTTGGA+TGG | - | chr2.3:69261660-69261679 | None:intergenic | 20.0% |
! | AAAACTATACATGCTAACAA+TGG | - | chr2.3:69263132-69263151 | None:intergenic | 25.0% |
! | AAAATGTAGCAATAAACTTG+TGG | - | chr2.3:69264213-69264232 | None:intergenic | 25.0% |
! | AAACTATACATGCTAACAAT+GGG | - | chr2.3:69263131-69263150 | None:intergenic | 25.0% |
! | AACAAAATCTAAGAAGGAAA+TGG | + | chr2.3:69261817-69261836 | MS.gene54290:intron | 25.0% |
! | AATGAGAAGGAAAATATTGA+AGG | + | chr2.3:69260946-69260965 | MS.gene54290:CDS | 25.0% |
! | AGCATTTAGACACAAAATTT+AGG | + | chr2.3:69262401-69262420 | MS.gene54290:intron | 25.0% |
! | ATATTAGTATTCAGTTCAAG+TGG | + | chr2.3:69261360-69261379 | MS.gene54290:intron | 25.0% |
! | ATTAAGGAAAACAAGATGAA+AGG | - | chr2.3:69263428-69263447 | None:intergenic | 25.0% |
! | ATTTAAAAATGGGAGTAAAG+CGG | + | chr2.3:69262330-69262349 | MS.gene54290:intron | 25.0% |
! | CAATGTGTACACATTTATAA+AGG | + | chr2.3:69263780-69263799 | MS.gene54290:intron | 25.0% |
! | TAACAATTATATTCAGAGTG+AGG | + | chr2.3:69260783-69260802 | MS.gene54290:CDS | 25.0% |
! | TATCTTCACACAAAAATTGT+AGG | - | chr2.3:69263636-69263655 | None:intergenic | 25.0% |
! | TATTTGATGTCTTGTATCAA+AGG | - | chr2.3:69262746-69262765 | None:intergenic | 25.0% |
! | TGAACTGAATACTAATATTG+AGG | - | chr2.3:69261358-69261377 | None:intergenic | 25.0% |
!! | AAAATGAGAAAGTCTTTTGT+AGG | + | chr2.3:69262374-69262393 | MS.gene54290:intron | 25.0% |
!! | CAAAATAAGCAATTTTGCAT+TGG | + | chr2.3:69262038-69262057 | MS.gene54290:intron | 25.0% |
!! | CAATGCAAAATTGCTTATTT+TGG | - | chr2.3:69262040-69262059 | None:intergenic | 25.0% |
!! | TCTACTATACCATTTTGTTA+CGG | + | chr2.3:69262650-69262669 | MS.gene54290:intron | 25.0% |
!! | TTCAAAGATTTTGTGGAAAA+AGG | - | chr2.3:69261944-69261963 | None:intergenic | 25.0% |
!!! | ATGCGTTTTGTTTGTTTTTT+GGG | - | chr2.3:69262593-69262612 | None:intergenic | 25.0% |
!!! | CCTTCTTAGATTTTGTTTTT+GGG | - | chr2.3:69261814-69261833 | None:intergenic | 25.0% |
!!! | CTTCTTAGATTTTGTTTTTG+GGG | - | chr2.3:69261813-69261832 | None:intergenic | 25.0% |
!!! | TATGCGTTTTGTTTGTTTTT+TGG | - | chr2.3:69262594-69262613 | None:intergenic | 25.0% |
!!! | TCCTTCTTAGATTTTGTTTT+TGG | - | chr2.3:69261815-69261834 | None:intergenic | 25.0% |
!!! | TTGTTTTGTTATGTTGACTT+TGG | - | chr2.3:69263008-69263027 | None:intergenic | 25.0% |
!!! | TTTTTTTTCTTCTTGGTCAA+GGG | + | chr2.3:69262244-69262263 | MS.gene54290:intron | 25.0% |
!!! | TTTTTTTTTCTTCTTGGTCA+AGG | + | chr2.3:69262243-69262262 | MS.gene54290:intron | 25.0% |
AAAAAAGAATGATGAAGCTC+AGG | - | chr2.3:69261060-69261079 | None:intergenic | 30.0% | |
AAACAAGATGAAAGGAATGT+AGG | - | chr2.3:69263420-69263439 | None:intergenic | 30.0% | |
AAATAATGAAAGAAGAGGCA+AGG | + | chr2.3:69260990-69261009 | MS.gene54290:CDS | 30.0% | |
AACCTATTGAGAAAGTTGAA+TGG | + | chr2.3:69264117-69264136 | MS.gene54290:CDS | 30.0% | |
AAGTGATGAAGGAAGAATTT+AGG | + | chr2.3:69261885-69261904 | MS.gene54290:intron | 30.0% | |
ACTTACACCTAAAACTTATC+TGG | - | chr2.3:69261849-69261868 | None:intergenic | 30.0% | |
AGGACGATGAAATAAAACAT+TGG | - | chr2.3:69263066-69263085 | None:intergenic | 30.0% | |
AGTGATGAAGGAAGAATTTA+GGG | + | chr2.3:69261886-69261905 | MS.gene54290:intron | 30.0% | |
ATGATCAATCTTACCATCAT+TGG | - | chr2.3:69264440-69264459 | None:intergenic | 30.0% | |
CAACTCATCATTATGATTCA+AGG | + | chr2.3:69263386-69263405 | MS.gene54290:CDS | 30.0% | |
CATGAACAATATTCATCAAC+CGG | + | chr2.3:69264049-69264068 | MS.gene54290:CDS | 30.0% | |
CCCAAAAACAAAATCTAAGA+AGG | + | chr2.3:69261811-69261830 | MS.gene54290:intron | 30.0% | |
CTAAGTCAACATTTCAAGAT+GGG | + | chr2.3:69263241-69263260 | MS.gene54290:CDS | 30.0% | |
CTGTGAATAATTACGAGATA+GGG | - | chr2.3:69263359-69263378 | None:intergenic | 30.0% | |
GAAGGAAATAATGAAAGAAG+AGG | + | chr2.3:69260985-69261004 | MS.gene54290:CDS | 30.0% | |
GATGAAAGTAATACTTCATC+TGG | + | chr2.3:69260820-69260839 | MS.gene54290:CDS | 30.0% | |
GGGAAACAAAAACAAAATGA+AGG | - | chr2.3:69262903-69262922 | None:intergenic | 30.0% | |
TCATTTCTCCAGAAATTAGA+GGG | + | chr2.3:69261462-69261481 | MS.gene54290:intron | 30.0% | |
TCTAAGTCAACATTTCAAGA+TGG | + | chr2.3:69263240-69263259 | MS.gene54290:CDS | 30.0% | |
TCTGTGAATAATTACGAGAT+AGG | - | chr2.3:69263360-69263379 | None:intergenic | 30.0% | |
TTATATTGTGTCTCTTGTCT+TGG | - | chr2.3:69262566-69262585 | None:intergenic | 30.0% | |
TTCCATTCAACTTTCTCAAT+AGG | - | chr2.3:69264122-69264141 | None:intergenic | 30.0% | |
! | CTACTATACCATTTTGTTAC+GGG | + | chr2.3:69262651-69262670 | MS.gene54290:intron | 30.0% |
! | GGTCATATTCAAAGATTTTG+TGG | - | chr2.3:69261951-69261970 | None:intergenic | 30.0% |
! | GTAGATACCAGATAAGTTTT+AGG | + | chr2.3:69261839-69261858 | MS.gene54290:intron | 30.0% |
! | TGTTATCAAAATTTTGCGGA+AGG | + | chr2.3:69261712-69261731 | MS.gene54290:intron | 30.0% |
!! | CCAATGTAACTTCTAAAACT+TGG | + | chr2.3:69264090-69264109 | MS.gene54290:CDS | 30.0% |
!!! | AGATAAGTTTTAGGTGTAAG+TGG | + | chr2.3:69261848-69261867 | MS.gene54290:intron | 30.0% |
!!! | CCAAGTTTTAGAAGTTACAT+TGG | - | chr2.3:69264093-69264112 | None:intergenic | 30.0% |
!!! | GTTATGTTGACTTTGGTTTT+AGG | - | chr2.3:69263001-69263020 | None:intergenic | 30.0% |
!!! | TTGTTTTTGGGGAAAGATTT+TGG | - | chr2.3:69261802-69261821 | None:intergenic | 30.0% |
AAGTGAAATCTTGAAGGAGA+AGG | - | chr2.3:69262769-69262788 | None:intergenic | 35.0% | |
AATGTTACCTTGATCCGAAA+TGG | - | chr2.3:69264242-69264261 | None:intergenic | 35.0% | |
ATAATTACGAGATAGGGAGA+AGG | - | chr2.3:69263353-69263372 | None:intergenic | 35.0% | |
ATGTTACCTTGATCCGAAAT+GGG | - | chr2.3:69264241-69264260 | None:intergenic | 35.0% | |
CAACATTTCAAGATGGGTAA+TGG | + | chr2.3:69263247-69263266 | MS.gene54290:CDS | 35.0% | |
CATGAATCACATCTAAGAGA+TGG | + | chr2.3:69262619-69262638 | MS.gene54290:intron | 35.0% | |
CATGTTAACTTATGCCCTAA+GGG | + | chr2.3:69261999-69262018 | MS.gene54290:intron | 35.0% | |
CTCATTTCTCCAGAAATTAG+AGG | + | chr2.3:69261461-69261480 | MS.gene54290:intron | 35.0% | |
CTGTTTCAACAAAGTGATGA+AGG | + | chr2.3:69261874-69261893 | MS.gene54290:intron | 35.0% | |
CTTCAGCTAATGAATGTAAG+AGG | + | chr2.3:69261221-69261240 | MS.gene54290:CDS | 35.0% | |
CTTCATCACTTTGTTGAAAC+AGG | - | chr2.3:69261876-69261895 | None:intergenic | 35.0% | |
GAGAGAGATTAATTGCAAGA+AGG | - | chr2.3:69263913-69263932 | None:intergenic | 35.0% | |
GAGTATTTGTCTGTGAATAG+TGG | + | chr2.3:69263590-69263609 | MS.gene54290:intron | 35.0% | |
GGTAATTGTAGATCAAGAGA+AGG | + | chr2.3:69260967-69260986 | MS.gene54290:CDS | 35.0% | |
GTGATTAAACCTCTTGTTCA+TGG | + | chr2.3:69262186-69262205 | MS.gene54290:intron | 35.0% | |
GTTGGAAAGCTAAAGAGAAA+GGG | - | chr2.3:69262923-69262942 | None:intergenic | 35.0% | |
TAGCTTAGTGCTAATTTCCT+TGG | - | chr2.3:69264473-69264492 | None:intergenic | 35.0% | |
TCATGTTAACTTATGCCCTA+AGG | + | chr2.3:69261998-69262017 | MS.gene54290:intron | 35.0% | |
TGAGCAAAGTGAAATCTTGA+AGG | - | chr2.3:69262775-69262794 | None:intergenic | 35.0% | |
TTAAACCTCTTGTTCATGGT+TGG | + | chr2.3:69262190-69262209 | MS.gene54290:intron | 35.0% | |
TTCATCAACCGGAATTCAAA+AGG | + | chr2.3:69264060-69264079 | MS.gene54290:CDS | 35.0% | |
TTCTCTTCAAGAAATTGGGT+TGG | - | chr2.3:69264008-69264027 | None:intergenic | 35.0% | |
TTTCGGATCAAGGTAACATT+AGG | + | chr2.3:69264242-69264261 | MS.gene54290:intron | 35.0% | |
TTTGGCAGAAAGAAAAGAGA+TGG | - | chr2.3:69261784-69261803 | None:intergenic | 35.0% | |
! | AATTTAGGGTTAGCATCACT+AGG | + | chr2.3:69261900-69261919 | MS.gene54290:intron | 35.0% |
! | ACCTTTTGTTGCAATTTTGC+CGG | - | chr2.3:69262967-69262986 | None:intergenic | 35.0% |
!!! | TACATTTTGAAGCCCCATTT+CGG | + | chr2.3:69264225-69264244 | MS.gene54290:CDS | 35.0% |
AAACTTGACGAGTTTGGACA+AGG | + | chr2.3:69261628-69261647 | MS.gene54290:CDS | 40.0% | |
AAACTTGTGGAAGAGTTGCA+AGG | - | chr2.3:69264200-69264219 | None:intergenic | 40.0% | |
AAGACCAACACCTCACATTT+AGG | - | chr2.3:69262512-69262531 | None:intergenic | 40.0% | |
AGCAAGAAACTTGACGAGTT+TGG | + | chr2.3:69261622-69261641 | MS.gene54290:CDS | 40.0% | |
AGGAGAGTTGGATAATACTG+AGG | - | chr2.3:69263316-69263335 | None:intergenic | 40.0% | |
ATGTTAGATCCAAGATGCCT+AGG | + | chr2.3:69261022-69261041 | MS.gene54290:CDS | 40.0% | |
CACACATATGGAACCAATGA+TGG | + | chr2.3:69264424-69264443 | MS.gene54290:CDS | 40.0% | |
CCATGAAGCAACAATACTTG+AGG | + | chr2.3:69260897-69260916 | MS.gene54290:CDS | 40.0% | |
CTAGGTTTGAGTCACACATA+TGG | + | chr2.3:69264412-69264431 | MS.gene54290:CDS | 40.0% | |
CTCAAACCTAGTTGCAAATC+AGG | - | chr2.3:69264403-69264422 | None:intergenic | 40.0% | |
GAACGAGAATGAGAATGAGA+AGG | + | chr2.3:69260933-69260952 | MS.gene54290:CDS | 40.0% | |
GGTTGGAAAGCTAAAGAGAA+AGG | - | chr2.3:69262924-69262943 | None:intergenic | 40.0% | |
TACTTTCATCAACAAGCTGC+AGG | - | chr2.3:69260810-69260829 | None:intergenic | 40.0% | |
TCCGGCAAAATTGCAACAAA+AGG | + | chr2.3:69262963-69262982 | MS.gene54290:intron | 40.0% | |
TGAAGGTTCATGATGTCATC+CGG | - | chr2.3:69262886-69262905 | None:intergenic | 40.0% | |
TGTGGATACCCGTAACAAAA+TGG | - | chr2.3:69262662-69262681 | None:intergenic | 40.0% | |
TGTTACCTTGATCCGAAATG+GGG | - | chr2.3:69264240-69264259 | None:intergenic | 40.0% | |
TTCCTTAACATGTGCCCTTA+GGG | - | chr2.3:69262016-69262035 | None:intergenic | 40.0% | |
TTTCACTTTGCTCAAGCTCT+CGG | + | chr2.3:69262781-69262800 | MS.gene54290:intron | 40.0% | |
! | AATGCTAACTTGTGTCCTCA+AGG | - | chr2.3:69262147-69262166 | None:intergenic | 40.0% |
! | ATGCTAACTTGTGTCCTCAA+GGG | - | chr2.3:69262146-69262165 | None:intergenic | 40.0% |
! | ATTAGCTGAAGCACCAACTT+GGG | - | chr2.3:69261212-69261231 | None:intergenic | 40.0% |
! | ATTTGGTTCAACTCTGATGC+AGG | + | chr2.3:69261179-69261198 | MS.gene54290:intron | 40.0% |
! | CATTTCAAGATGGGTAATGG+TGG | + | chr2.3:69263250-69263269 | MS.gene54290:CDS | 40.0% |
! | CCTCAAGTATTGTTGCTTCA+TGG | - | chr2.3:69260900-69260919 | None:intergenic | 40.0% |
! | GATGATTGAAGTGCCAATGT+TGG | - | chr2.3:69263959-69263978 | None:intergenic | 40.0% |
! | GCAAGTAGCCTTTTGAATTC+CGG | - | chr2.3:69264071-69264090 | None:intergenic | 40.0% |
! | TTCTTGCCTGATTTGCAACT+AGG | + | chr2.3:69264394-69264413 | MS.gene54290:CDS | 40.0% |
! | TTGCATGCTGTTGATAGACT+TGG | + | chr2.3:69261078-69261097 | MS.gene54290:CDS | 40.0% |
!! | AAGAAATTGGGTTGGTGTCA+CGG | - | chr2.3:69264000-69264019 | None:intergenic | 40.0% |
!!! | GTGGCATATTTTGGTGGATT+TGG | + | chr2.3:69262212-69262231 | MS.gene54290:intron | 40.0% |
!!! | TCATGGTTGGTGGCATATTT+TGG | + | chr2.3:69262203-69262222 | MS.gene54290:intron | 40.0% |
AACCTCTTGTTCATGGTTGG+TGG | + | chr2.3:69262193-69262212 | MS.gene54290:intron | 45.0% | |
CAACGGTACCCTCTAATTTC+TGG | - | chr2.3:69261473-69261492 | None:intergenic | 45.0% | |
CAGAGGTCAACACAAGAAGT+TGG | + | chr2.3:69263199-69263218 | MS.gene54290:CDS | 45.0% | |
CAGTACTATGCCAAACACAG+AGG | + | chr2.3:69263182-69263201 | MS.gene54290:intron | 45.0% | |
GATCCAAGATGCCTAGGTTA+AGG | + | chr2.3:69261028-69261047 | MS.gene54290:CDS | 45.0% | |
GGAAGAGTTGCAAGGTTCTT+TGG | - | chr2.3:69264192-69264211 | None:intergenic | 45.0% | |
GTTCCTTAACATGTGCCCTT+AGG | - | chr2.3:69262147-69262128 | None:intergenic | 45.0% | |
TACGAGATAGGGAGAAGGAA+GGG | - | chr2.3:69263348-69263367 | None:intergenic | 45.0% | |
TCATGTCAAGTCTCACTTGC+AGG | + | chr2.3:69261256-69261275 | MS.gene54290:CDS | 45.0% | |
TCTCTCTCTCTCTGATCTCT+AGG | + | chr2.3:69263931-69263950 | MS.gene54290:intron | 45.0% | |
TGAGTGTGTGCCTAAATGTG+AGG | + | chr2.3:69262499-69262518 | MS.gene54290:intron | 45.0% | |
TGATCATTGCAGAGAGACCA+AGG | + | chr2.3:69264453-69264472 | MS.gene54290:CDS | 45.0% | |
TGATCTCTAGGCACCAACAT+TGG | + | chr2.3:69263943-69263962 | MS.gene54290:intron | 45.0% | |
TGTGCCTAAATGTGAGGTGT+TGG | + | chr2.3:69262505-69262524 | MS.gene54290:intron | 45.0% | |
TTACGAGATAGGGAGAAGGA+AGG | - | chr2.3:69263349-69263368 | None:intergenic | 45.0% | |
TTCCTTAACATGTGCCCTTG+AGG | + | chr2.3:69262129-69262148 | MS.gene54290:intron | 45.0% | |
! | CATGCTGTTGATAGACTTGG+TGG | + | chr2.3:69261081-69261100 | MS.gene54290:CDS | 45.0% |
! | CATTAGCTGAAGCACCAACT+TGG | - | chr2.3:69261213-69261232 | None:intergenic | 45.0% |
! | CTTGTGTTGACCTCTGTGTT+TGG | - | chr2.3:69263195-69263214 | None:intergenic | 45.0% |
!! | AGAAATTGGGTTGGTGTCAC+GGG | - | chr2.3:69263999-69264018 | None:intergenic | 45.0% |
!!! | TGGTTGGTGGCATATTTTGG+TGG | + | chr2.3:69262206-69262225 | MS.gene54290:intron | 45.0% |
!! | AAAAGAAATAAATTTAAAAA+TGG | + | chr2.3:69262319-69262338 | MS.gene54290:intron | 5.0% |
!! | AAAGAAATAAATTTAAAAAT+GGG | + | chr2.3:69262320-69262339 | MS.gene54290:intron | 5.0% |
!! | ATTAATACAATTAAAATATA+GGG | - | chr2.3:69263553-69263572 | None:intergenic | 5.0% |
!! | TTAATAATATAGTTTAATTA+AGG | - | chr2.3:69263444-69263463 | None:intergenic | 5.0% |
AGGTTCATGATGTCATCCGG+AGG | - | chr2.3:69262883-69262902 | None:intergenic | 50.0% | |
CCAAGATGCCTAGGTTAAGG+TGG | + | chr2.3:69261031-69261050 | MS.gene54290:CDS | 50.0% | |
CCACCTTAACCTAGGCATCT+TGG | - | chr2.3:69261034-69261053 | None:intergenic | 50.0% | |
GTCACGGGTGCAAATCTGAA+AGG | - | chr2.3:69263984-69264003 | None:intergenic | 50.0% | |
TCAGGAGTCCACCTTAACCT+AGG | - | chr2.3:69261042-69261061 | None:intergenic | 50.0% | |
TGAAGCCCCATTTCGGATCA+AGG | + | chr2.3:69264232-69264251 | MS.gene54290:CDS | 50.0% | |
TGCCACCAACCATGAACAAG+AGG | - | chr2.3:69262198-69262217 | None:intergenic | 50.0% | |
TTTGCTCAAGCTCTCGGAGA+AGG | + | chr2.3:69262787-69262806 | MS.gene54290:intron | 50.0% | |
! | GTCCTCAAGGGCACATGTTA+AGG | - | chr2.3:69262134-69262153 | None:intergenic | 50.0% |
! | TGCCCTAAGGGCACATGTTA+AGG | + | chr2.3:69262011-69262030 | MS.gene54290:intron | 50.0% |
GATAGGGAGAAGGAAGGGCA+TGG | - | chr2.3:69263343-69263362 | None:intergenic | 55.0% | |
TGATGTCATCCGGAGGAGAG+TGG | - | chr2.3:69262876-69262895 | None:intergenic | 55.0% | |
TGCAGGAGCAACACCCAAGT+TGG | + | chr2.3:69261196-69261215 | MS.gene54290:intron | 55.0% | |
CTTCGTCCACCACTCTCCTC+CGG | + | chr2.3:69262864-69262883 | MS.gene54290:intron | 60.0% | |
TGTCATCCGGAGGAGAGTGG+TGG | - | chr2.3:69262873-69262892 | None:intergenic | 60.0% | |
! | AGAAGGAAGGGCATGGCTGC+AGG | - | chr2.3:69263336-69263355 | None:intergenic | 60.0% |
GGGCATGGCTGCAGGAGAGT+TGG | - | chr2.3:69263328-69263347 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 69260757 | 69264504 | 69260757 | ID=MS.gene54290 |
chr2.3 | mRNA | 69260757 | 69264504 | 69260757 | ID=MS.gene54290.t1;Parent=MS.gene54290 |
chr2.3 | exon | 69260757 | 69261111 | 69260757 | ID=MS.gene54290.t1.exon1;Parent=MS.gene54290.t1 |
chr2.3 | CDS | 69260757 | 69261111 | 69260757 | ID=cds.MS.gene54290.t1;Parent=MS.gene54290.t1 |
chr2.3 | exon | 69261201 | 69261277 | 69261201 | ID=MS.gene54290.t1.exon2;Parent=MS.gene54290.t1 |
chr2.3 | CDS | 69261201 | 69261277 | 69261201 | ID=cds.MS.gene54290.t1;Parent=MS.gene54290.t1 |
chr2.3 | exon | 69261613 | 69261649 | 69261613 | ID=MS.gene54290.t1.exon3;Parent=MS.gene54290.t1 |
chr2.3 | CDS | 69261613 | 69261649 | 69261613 | ID=cds.MS.gene54290.t1;Parent=MS.gene54290.t1 |
chr2.3 | exon | 69263185 | 69263407 | 69263185 | ID=MS.gene54290.t1.exon4;Parent=MS.gene54290.t1 |
chr2.3 | CDS | 69263185 | 69263407 | 69263185 | ID=cds.MS.gene54290.t1;Parent=MS.gene54290.t1 |
chr2.3 | exon | 69263953 | 69264253 | 69263953 | ID=MS.gene54290.t1.exon5;Parent=MS.gene54290.t1 |
chr2.3 | CDS | 69263953 | 69264253 | 69263953 | ID=cds.MS.gene54290.t1;Parent=MS.gene54290.t1 |
chr2.3 | exon | 69264358 | 69264504 | 69264358 | ID=MS.gene54290.t1.exon6;Parent=MS.gene54290.t1 |
chr2.3 | CDS | 69264358 | 69264504 | 69264358 | ID=cds.MS.gene54290.t1;Parent=MS.gene54290.t1 |
Gene Sequence |
Protein sequence |