Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64961.t1 | XP_003617641.1 | 94.2 | 538 | 24 | 2 | 1 | 532 | 24 | 560 | 1.80E-270 | 941.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64961.t1 | Q8S9L5 | 65.5 | 469 | 161 | 1 | 66 | 533 | 79 | 547 | 1.7e-176 | 620.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64961.t1 | G7K8P7 | 94.2 | 538 | 24 | 2 | 1 | 532 | 24 | 560 | 1.3e-270 | 941.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049284 | MS.gene64961 | 0.840954 | 6.37E-58 | -1.69E-46 |
| MS.gene049297 | MS.gene64961 | 0.844082 | 9.42E-59 | -1.69E-46 |
| MS.gene049346 | MS.gene64961 | 0.812501 | 4.11E-51 | -1.69E-46 |
| MS.gene049351 | MS.gene64961 | 0.8335 | 5.15E-56 | -1.69E-46 |
| MS.gene049427 | MS.gene64961 | 0.806096 | 9.71E-50 | -1.69E-46 |
| MS.gene049491 | MS.gene64961 | 0.841822 | 3.76E-58 | -1.69E-46 |
| MS.gene049661 | MS.gene64961 | 0.836768 | 7.71E-57 | -1.69E-46 |
| MS.gene049662 | MS.gene64961 | 0.837791 | 4.22E-57 | -1.69E-46 |
| MS.gene049681 | MS.gene64961 | 0.801518 | 8.67E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene64961 | 0.852538 | 4.32E-61 | -1.69E-46 |
| MS.gene049910 | MS.gene64961 | 0.803798 | 2.93E-49 | -1.69E-46 |
| MS.gene050076 | MS.gene64961 | 0.850601 | 1.53E-60 | -1.69E-46 |
| MS.gene050099 | MS.gene64961 | 0.852322 | 4.98E-61 | -1.69E-46 |
| MS.gene050128 | MS.gene64961 | 0.812405 | 4.31E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene64961 | 0.902683 | 7.55E-79 | -1.69E-46 |
| MS.gene050397 | MS.gene64961 | 0.865066 | 7.73E-65 | -1.69E-46 |
| MS.gene050404 | MS.gene64961 | 0.905594 | 3.64E-80 | -1.69E-46 |
| MS.gene050406 | MS.gene64961 | 0.878953 | 1.85E-69 | -1.69E-46 |
| MS.gene050432 | MS.gene64961 | 0.806974 | 6.34E-50 | -1.69E-46 |
| MS.gene050464 | MS.gene64961 | 0.860412 | 2.10E-63 | -1.69E-46 |
| MS.gene050529 | MS.gene64961 | 0.878177 | 3.47E-69 | -1.69E-46 |
| MS.gene050558 | MS.gene64961 | 0.836749 | 7.80E-57 | -1.69E-46 |
| MS.gene050642 | MS.gene64961 | 0.837459 | 5.13E-57 | -1.69E-46 |
| MS.gene050670 | MS.gene64961 | 0.80716 | 5.79E-50 | -1.69E-46 |
| MS.gene050783 | MS.gene64961 | 0.82581 | 3.83E-54 | -1.69E-46 |
| MS.gene050812 | MS.gene64961 | 0.839399 | 1.62E-57 | -1.69E-46 |
| MS.gene05101 | MS.gene64961 | 0.903278 | 4.09E-79 | -1.69E-46 |
| MS.gene051171 | MS.gene64961 | 0.843031 | 1.80E-58 | -1.69E-46 |
| MS.gene051240 | MS.gene64961 | 0.840004 | 1.13E-57 | -1.69E-46 |
| MS.gene051242 | MS.gene64961 | 0.849368 | 3.38E-60 | -1.69E-46 |
| MS.gene051471 | MS.gene64961 | 0.871005 | 9.50E-67 | -1.69E-46 |
| MS.gene051582 | MS.gene64961 | 0.822609 | 2.16E-53 | -1.69E-46 |
| MS.gene051662 | MS.gene64961 | 0.822911 | 1.84E-53 | -1.69E-46 |
| MS.gene051663 | MS.gene64961 | 0.833768 | 4.41E-56 | -1.69E-46 |
| MS.gene051860 | MS.gene64961 | 0.827344 | 1.65E-54 | -1.69E-46 |
| MS.gene051983 | MS.gene64961 | 0.8235 | 1.34E-53 | -1.69E-46 |
| MS.gene052011 | MS.gene64961 | -0.815703 | 8.07E-52 | -1.69E-46 |
| MS.gene052077 | MS.gene64961 | 0.83072 | 2.51E-55 | -1.69E-46 |
| MS.gene052078 | MS.gene64961 | 0.877626 | 5.41E-69 | -1.69E-46 |
| MS.gene052178 | MS.gene64961 | 0.860914 | 1.48E-63 | -1.69E-46 |
| MS.gene052188 | MS.gene64961 | 0.877528 | 5.85E-69 | -1.69E-46 |
| MS.gene052253 | MS.gene64961 | 0.852944 | 3.31E-61 | -1.69E-46 |
| MS.gene052290 | MS.gene64961 | 0.809745 | 1.63E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene64961 | 0.879601 | 1.09E-69 | -1.69E-46 |
| MS.gene052322 | MS.gene64961 | 0.817713 | 2.86E-52 | -1.69E-46 |
| MS.gene052326 | MS.gene64961 | 0.855747 | 5.13E-62 | -1.69E-46 |
| MS.gene052340 | MS.gene64961 | 0.883118 | 5.88E-71 | -1.69E-46 |
| MS.gene052600 | MS.gene64961 | 0.81301 | 3.18E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene64961 | 0.829421 | 5.20E-55 | -1.69E-46 |
| MS.gene053330 | MS.gene64961 | 0.811202 | 7.88E-51 | -1.69E-46 |
| MS.gene053557 | MS.gene64961 | 0.877401 | 6.47E-69 | -1.69E-46 |
| MS.gene053836 | MS.gene64961 | 0.892752 | 1.19E-74 | -1.69E-46 |
| MS.gene053907 | MS.gene64961 | 0.856711 | 2.68E-62 | -1.69E-46 |
| MS.gene053928 | MS.gene64961 | 0.822417 | 2.40E-53 | -1.69E-46 |
| MS.gene053971 | MS.gene64961 | 0.849184 | 3.81E-60 | -1.69E-46 |
| MS.gene054011 | MS.gene64961 | 0.804505 | 2.09E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene64961 | 0.865922 | 4.15E-65 | -1.69E-46 |
| MS.gene054349 | MS.gene64961 | 0.848654 | 5.34E-60 | -1.69E-46 |
| MS.gene054376 | MS.gene64961 | 0.806203 | 9.22E-50 | -1.69E-46 |
| MS.gene054473 | MS.gene64961 | 0.813935 | 1.99E-51 | -1.69E-46 |
| MS.gene05455 | MS.gene64961 | 0.815722 | 7.99E-52 | -1.69E-46 |
| MS.gene054930 | MS.gene64961 | 0.814872 | 1.23E-51 | -1.69E-46 |
| MS.gene054942 | MS.gene64961 | 0.825238 | 5.23E-54 | -1.69E-46 |
| MS.gene054983 | MS.gene64961 | 0.834732 | 2.53E-56 | -1.69E-46 |
| MS.gene055116 | MS.gene64961 | 0.859865 | 3.08E-63 | -1.69E-46 |
| MS.gene055277 | MS.gene64961 | 0.871425 | 6.90E-67 | -1.69E-46 |
| MS.gene055390 | MS.gene64961 | 0.842588 | 2.36E-58 | -1.69E-46 |
| MS.gene055422 | MS.gene64961 | 0.888777 | 4.37E-73 | -1.69E-46 |
| MS.gene055428 | MS.gene64961 | 0.893971 | 3.82E-75 | -1.69E-46 |
| MS.gene05553 | MS.gene64961 | 0.84552 | 3.86E-59 | -1.69E-46 |
| MS.gene055604 | MS.gene64961 | 0.843657 | 1.22E-58 | -1.69E-46 |
| MS.gene055712 | MS.gene64961 | 0.817044 | 4.04E-52 | -1.69E-46 |
| MS.gene055896 | MS.gene64961 | 0.821667 | 3.57E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene64961 | 0.824069 | 9.86E-54 | -1.69E-46 |
| MS.gene056314 | MS.gene64961 | 0.804611 | 1.99E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene64961 | 0.832591 | 8.66E-56 | -1.69E-46 |
| MS.gene056410 | MS.gene64961 | 0.810866 | 9.32E-51 | -1.69E-46 |
| MS.gene056451 | MS.gene64961 | 0.837211 | 5.94E-57 | -1.69E-46 |
| MS.gene056609 | MS.gene64961 | 0.857577 | 1.48E-62 | -1.69E-46 |
| MS.gene056612 | MS.gene64961 | 0.904488 | 1.16E-79 | -1.69E-46 |
| MS.gene056659 | MS.gene64961 | 0.864711 | 9.99E-65 | -1.69E-46 |
| MS.gene056664 | MS.gene64961 | 0.825112 | 5.60E-54 | -1.69E-46 |
| MS.gene056719 | MS.gene64961 | 0.801383 | 9.24E-49 | -1.69E-46 |
| MS.gene056772 | MS.gene64961 | 0.800872 | 1.18E-48 | -1.69E-46 |
| MS.gene056796 | MS.gene64961 | 0.846483 | 2.11E-59 | -1.69E-46 |
| MS.gene056899 | MS.gene64961 | -0.809301 | 2.02E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene64961 | 0.815934 | 7.17E-52 | -1.69E-46 |
| MS.gene05702 | MS.gene64961 | 0.895127 | 1.29E-75 | -1.69E-46 |
| MS.gene057121 | MS.gene64961 | 0.866281 | 3.20E-65 | -1.69E-46 |
| MS.gene057123 | MS.gene64961 | 0.81098 | 8.80E-51 | -1.69E-46 |
| MS.gene057245 | MS.gene64961 | 0.839805 | 1.27E-57 | -1.69E-46 |
| MS.gene057295 | MS.gene64961 | 0.826801 | 2.22E-54 | -1.69E-46 |
| MS.gene05733 | MS.gene64961 | 0.852966 | 3.26E-61 | -1.69E-46 |
| MS.gene057439 | MS.gene64961 | 0.853924 | 1.73E-61 | -1.69E-46 |
| MS.gene057749 | MS.gene64961 | 0.83658 | 8.61E-57 | -1.69E-46 |
| MS.gene057823 | MS.gene64961 | 0.818944 | 1.50E-52 | -1.69E-46 |
| MS.gene057825 | MS.gene64961 | 0.824652 | 7.19E-54 | -1.69E-46 |
| MS.gene058002 | MS.gene64961 | 0.893686 | 4.99E-75 | -1.69E-46 |
| MS.gene058082 | MS.gene64961 | 0.845607 | 3.66E-59 | -1.69E-46 |
| MS.gene05811 | MS.gene64961 | 0.880447 | 5.45E-70 | -1.69E-46 |
| MS.gene058142 | MS.gene64961 | 0.904797 | 8.43E-80 | -1.69E-46 |
| MS.gene058233 | MS.gene64961 | 0.880536 | 5.06E-70 | -1.69E-46 |
| MS.gene058276 | MS.gene64961 | 0.882212 | 1.26E-70 | -1.69E-46 |
| MS.gene058293 | MS.gene64961 | 0.813412 | 2.59E-51 | -1.69E-46 |
| MS.gene058365 | MS.gene64961 | 0.839567 | 1.47E-57 | -1.69E-46 |
| MS.gene058660 | MS.gene64961 | 0.887059 | 1.99E-72 | -1.69E-46 |
| MS.gene058710 | MS.gene64961 | 0.818145 | 2.28E-52 | -1.69E-46 |
| MS.gene058746 | MS.gene64961 | 0.820273 | 7.48E-53 | -1.69E-46 |
| MS.gene058749 | MS.gene64961 | 0.848941 | 4.45E-60 | -1.69E-46 |
| MS.gene058787 | MS.gene64961 | 0.806643 | 7.45E-50 | -1.69E-46 |
| MS.gene058833 | MS.gene64961 | 0.80762 | 4.63E-50 | -1.69E-46 |
| MS.gene058845 | MS.gene64961 | 0.844921 | 5.60E-59 | -1.69E-46 |
| MS.gene05886 | MS.gene64961 | 0.84825 | 6.91E-60 | -1.69E-46 |
| MS.gene058928 | MS.gene64961 | 0.818762 | 1.65E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene64961 | 0.87146 | 6.72E-67 | -1.69E-46 |
| MS.gene059285 | MS.gene64961 | 0.838453 | 2.85E-57 | -1.69E-46 |
| MS.gene059294 | MS.gene64961 | 0.808324 | 3.27E-50 | -1.69E-46 |
| MS.gene059342 | MS.gene64961 | 0.800817 | 1.21E-48 | -1.69E-46 |
| MS.gene059420 | MS.gene64961 | 0.80002 | 1.75E-48 | -1.69E-46 |
| MS.gene059518 | MS.gene64961 | 0.859787 | 3.25E-63 | -1.69E-46 |
| MS.gene059597 | MS.gene64961 | 0.905437 | 4.30E-80 | -1.69E-46 |
| MS.gene05959 | MS.gene64961 | 0.841524 | 4.51E-58 | -1.69E-46 |
| MS.gene059676 | MS.gene64961 | 0.857579 | 1.48E-62 | -1.69E-46 |
| MS.gene059688 | MS.gene64961 | 0.849072 | 4.09E-60 | -1.69E-46 |
| MS.gene059692 | MS.gene64961 | 0.870691 | 1.21E-66 | -1.69E-46 |
| MS.gene059695 | MS.gene64961 | 0.866294 | 3.17E-65 | -1.69E-46 |
| MS.gene059708 | MS.gene64961 | 0.812352 | 4.43E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene64961 | 0.870373 | 1.53E-66 | -1.69E-46 |
| MS.gene059894 | MS.gene64961 | 0.904468 | 1.19E-79 | -1.69E-46 |
| MS.gene059899 | MS.gene64961 | 0.840984 | 6.25E-58 | -1.69E-46 |
| MS.gene060247 | MS.gene64961 | 0.807062 | 6.07E-50 | -1.69E-46 |
| MS.gene06037 | MS.gene64961 | 0.840972 | 6.30E-58 | -1.69E-46 |
| MS.gene060407 | MS.gene64961 | 0.889753 | 1.83E-73 | -1.69E-46 |
| MS.gene060476 | MS.gene64961 | 0.814903 | 1.22E-51 | -1.69E-46 |
| MS.gene060495 | MS.gene64961 | 0.803645 | 3.16E-49 | -1.69E-46 |
| MS.gene06090 | MS.gene64961 | 0.838915 | 2.17E-57 | -1.69E-46 |
| MS.gene061049 | MS.gene64961 | 0.903201 | 4.43E-79 | -1.69E-46 |
| MS.gene061051 | MS.gene64961 | -0.812324 | 4.49E-51 | -1.69E-46 |
| MS.gene061112 | MS.gene64961 | 0.824657 | 7.17E-54 | -1.69E-46 |
| MS.gene061159 | MS.gene64961 | 0.807324 | 5.34E-50 | -1.69E-46 |
| MS.gene061265 | MS.gene64961 | 0.824533 | 7.67E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64961.t1 | MTR_5g093830 | 94.052 | 538 | 25 | 2 | 1 | 532 | 24 | 560 | 0.0 | 984 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64961.t1 | AT5G55220 | 58.909 | 550 | 206 | 6 | 1 | 533 | 1 | 547 | 0.0 | 654 |
Find 88 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTTCCTTGATTCTATAAT+TGG | 0.125068 | 5.4:+73623138 | MS.gene64961:CDS |
| TCAGAAATCCATTTAATTTC+TGG | 0.168583 | 5.4:-73622452 | None:intergenic |
| ATGTTGCACCAGAAATTAAA+TGG | 0.259733 | 5.4:+73622444 | MS.gene64961:CDS |
| ATTATTCTCTTGGATATCTT+AGG | 0.276468 | 5.4:+73622199 | MS.gene64961:CDS |
| GAGGTTGAAGGAGTTGAATT+TGG | 0.284849 | 5.4:-73620619 | None:intergenic |
| TCAATACCTGCATTTCTAAT+AGG | 0.299634 | 5.4:-73624082 | None:intergenic |
| AAGATATCCAAGAGAATAAT+AGG | 0.302320 | 5.4:-73622196 | None:intergenic |
| GGTTACTGGAAGGGCTTTGC+AGG | 0.317659 | 5.4:+73622131 | MS.gene64961:intron |
| TATATTAGATCAGATTTCTA+AGG | 0.345020 | 5.4:+73623754 | MS.gene64961:CDS |
| CTTGATTCTATAATTGGAAT+TGG | 0.347085 | 5.4:+73623144 | MS.gene64961:CDS |
| TAGCTGTTTGCTCTATCTCT+TGG | 0.360719 | 5.4:-73623709 | None:intergenic |
| AGTAACACATACTCTGGAAT+TGG | 0.365055 | 5.4:-73620787 | None:intergenic |
| AGTATTCTTGTTGGTTATGT+GGG | 0.365092 | 5.4:+73621834 | MS.gene64961:CDS |
| CCGTCTTCCTGCTGAATTGA+AGG | 0.365791 | 5.4:+73620746 | MS.gene64961:CDS |
| GAGGATACCTATTATTCTCT+TGG | 0.370823 | 5.4:+73622189 | MS.gene64961:CDS |
| AGATATTCATTCACGGACTT+TGG | 0.385184 | 5.4:-73624277 | None:intergenic |
| TGGCAGTTGGTGACATATAT+AGG | 0.388142 | 5.4:+73624344 | MS.gene64961:CDS |
| TAACCAACAAGAATACTTTC+CGG | 0.396552 | 5.4:-73621828 | None:intergenic |
| GAACAAGGTAGACAGCTATA+TGG | 0.427214 | 5.4:+73624053 | MS.gene64961:CDS |
| AACCAACAAGAATACTTTCC+GGG | 0.427325 | 5.4:-73621827 | None:intergenic |
| TGGATGTACCACAGTGCAAC+AGG | 0.439789 | 5.4:+73623558 | MS.gene64961:CDS |
| AAGTATTCTTGTTGGTTATG+TGG | 0.444352 | 5.4:+73621833 | MS.gene64961:CDS |
| GTCCCGGAAAGTATTCTTGT+TGG | 0.452137 | 5.4:+73621825 | MS.gene64961:CDS |
| CGAACTTTGTAAACTCAACT+AGG | 0.456526 | 5.4:-73621445 | None:intergenic |
| TTACAGAGATTTACCAGAGC+TGG | 0.456759 | 5.4:+73623507 | MS.gene64961:CDS |
| GAAGAAGGAAGAGAGAAAGA+AGG | 0.469342 | 5.4:-73620564 | None:intergenic |
| TGTTGCACTGTGGTACATCC+AGG | 0.475737 | 5.4:-73623556 | None:intergenic |
| ATTGAAGGTCACTGAGACAA+AGG | 0.476315 | 5.4:+73620761 | MS.gene64961:CDS |
| CGAGGAACGTGTAAAGGAAC+AGG | 0.479197 | 5.4:+73624691 | MS.gene64961:CDS |
| TGAATATCTTGAGCATCATA+AGG | 0.481148 | 5.4:+73624291 | MS.gene64961:CDS |
| AAGAAGGAAGAGAGAAAGAA+GGG | 0.486758 | 5.4:-73620563 | None:intergenic |
| TACCTGCATTTCTAATAGGC+TGG | 0.492031 | 5.4:-73624078 | None:intergenic |
| GAATGAAGATGAGAGGTTGA+AGG | 0.494898 | 5.4:-73620631 | None:intergenic |
| AAAACTAACTGAAGAGCAGC+TGG | 0.495940 | 5.4:+73624240 | MS.gene64961:CDS |
| ATCCAGCCTATTAGAAATGC+AGG | 0.500445 | 5.4:+73624076 | MS.gene64961:CDS |
| ATACGACGAGGAACGTGTAA+AGG | 0.502907 | 5.4:+73624685 | MS.gene64961:CDS |
| AGAGAATTTGAAGAAGAAGA+AGG | 0.510181 | 5.4:-73620579 | None:intergenic |
| AAATTTGATCAAACAGAACT+TGG | 0.512017 | 5.4:+73624324 | MS.gene64961:CDS |
| ATTCCTTCTGCTGAAAGTAA+AGG | 0.519175 | 5.4:+73622968 | MS.gene64961:CDS |
| ATCAAACAGAACTTGGCAGT+TGG | 0.521719 | 5.4:+73624331 | MS.gene64961:CDS |
| TGTTACTGACAGAGGACTAC+AGG | 0.522402 | 5.4:+73622589 | MS.gene64961:CDS |
| AAGGAGCTAAGGTGCTAGAA+TGG | 0.522425 | 5.4:+73625151 | MS.gene64961:CDS |
| ATTATAGAATCAAGGAAGCC+TGG | 0.522610 | 5.4:-73623135 | None:intergenic |
| GCAATAGAATCATCCAGCTC+TGG | 0.523626 | 5.4:-73623520 | None:intergenic |
| AGTTCAACTGAAGAAGAAGA+TGG | 0.524580 | 5.4:-73620708 | None:intergenic |
| CTACCTTTACTTTCAGCAGA+AGG | 0.525053 | 5.4:-73622971 | None:intergenic |
| TCTATAATTGGAATTGGTCG+AGG | 0.525412 | 5.4:+73623150 | MS.gene64961:CDS |
| TCAGTGACCTTCAATTCAGC+AGG | 0.527113 | 5.4:-73620753 | None:intergenic |
| AGAAGGCGTTACAAGTCAGC+TGG | 0.527767 | 5.4:+73622554 | MS.gene64961:CDS |
| AAGAGATAGAGCAAACAGCT+AGG | 0.529180 | 5.4:+73623711 | MS.gene64961:CDS |
| CAATTCCAATTATAGAATCA+AGG | 0.531449 | 5.4:-73623143 | None:intergenic |
| GATATTTGATTCTTGATCAA+CGG | 0.532623 | 5.4:-73622939 | None:intergenic |
| CAGGTACCTGGATTTCGTCC+TGG | 0.538561 | 5.4:+73621795 | MS.gene64961:intron |
| ATTGCTGATAAACTTATCCC+TGG | 0.539379 | 5.4:+73623538 | MS.gene64961:CDS |
| TGTTCATCAAACAAGGATTG+AGG | 0.541311 | 5.4:-73624035 | None:intergenic |
| ATGCTCAAGATATTCATTCA+CGG | 0.543020 | 5.4:-73624284 | None:intergenic |
| AAGGTTCAAGAAATACTAGA+AGG | 0.544740 | 5.4:+73625132 | MS.gene64961:intron |
| GCATGTGGAGGTACCATCAC+TGG | 0.547973 | 5.4:+73621397 | MS.gene64961:CDS |
| CAATCCTTGTTTGATGAACA+AGG | 0.549416 | 5.4:+73624038 | MS.gene64961:CDS |
| AGAAATACTAGAAGGAGCTA+AGG | 0.563256 | 5.4:+73625140 | MS.gene64961:CDS |
| TTGACGTTTGAATTCAGCAA+TGG | 0.576175 | 5.4:-73624654 | None:intergenic |
| TGGAGAAGCTGAGACAGTGA+AGG | 0.576781 | 5.4:-73620688 | None:intergenic |
| ATATAGGCGTGAAAATATGC+AGG | 0.579562 | 5.4:+73624360 | MS.gene64961:CDS |
| GTATTCTTGTTGGTTATGTG+GGG | 0.588330 | 5.4:+73621835 | MS.gene64961:CDS |
| CTACGATCGAATCAATATTG+AGG | 0.589271 | 5.4:+73621877 | MS.gene64961:CDS |
| AGAGATAGAGCAAACAGCTA+GGG | 0.589916 | 5.4:+73623712 | MS.gene64961:CDS |
| TCTACCTTGTTCATCAAACA+AGG | 0.591447 | 5.4:-73624042 | None:intergenic |
| ATGCGAGGACTGTTACGAAA+GGG | 0.596481 | 5.4:+73621421 | MS.gene64961:CDS |
| TGAGTTTACAAAGTTCGCCA+AGG | 0.601858 | 5.4:+73621451 | MS.gene64961:CDS |
| CAGTCCTCGCATACCAGTGA+TGG | 0.604531 | 5.4:-73621410 | None:intergenic |
| TCTTTGATGATGTCTTCAGT+AGG | 0.610103 | 5.4:-73624620 | None:intergenic |
| TAAACTGAGCATGAACACCT+TGG | 0.610469 | 5.4:-73623227 | None:intergenic |
| TACTGAAGACATCATCAAAG+AGG | 0.612818 | 5.4:+73624622 | MS.gene64961:CDS |
| GGAGAAGCTGAGACAGTGAA+GGG | 0.614506 | 5.4:-73620687 | None:intergenic |
| ACTTTCACACGCTGTAACAG+CGG | 0.616868 | 5.4:+73621905 | MS.gene64961:CDS |
| CTGAAAGTTGTTACTGACAG+AGG | 0.619184 | 5.4:+73622581 | MS.gene64961:CDS |
| CCTGCAGGTTAGATTGCATG+TGG | 0.627284 | 5.4:+73621382 | MS.gene64961:intron |
| CCTTCAATTCAGCAGGAAGA+CGG | 0.628013 | 5.4:-73620746 | None:intergenic |
| GTTGAATGAATGAAGATGAG+AGG | 0.631899 | 5.4:-73620638 | None:intergenic |
| GATGGTGAAATATTAGTACC+AGG | 0.637257 | 5.4:+73623117 | MS.gene64961:CDS |
| TATGCGAGGACTGTTACGAA+AGG | 0.650131 | 5.4:+73621420 | MS.gene64961:CDS |
| GTTGCACTGTGGTACATCCA+GGG | 0.654086 | 5.4:-73623555 | None:intergenic |
| CGATCGAATCAATATTGAGG+AGG | 0.656634 | 5.4:+73621880 | MS.gene64961:CDS |
| TGGAAGCAGGAAAATCTCCA+AGG | 0.665686 | 5.4:+73623210 | MS.gene64961:CDS |
| GCAGGTTAGATTGCATGTGG+AGG | 0.673127 | 5.4:+73621385 | MS.gene64961:intron |
| GGTACCATCACTGGTATGCG+AGG | 0.674391 | 5.4:+73621406 | MS.gene64961:CDS |
| AGTTCGAGTACAGAGCTCCA+TGG | 0.675973 | 5.4:-73620514 | None:intergenic |
| AAAAGTCACCTGTTGCACTG+TGG | 0.753690 | 5.4:-73623566 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTATTTGTTCTTATT+TGG | + | chr5.4:73624190-73624209 | MS.gene64961:intron | 10.0% |
| !!! | GTACATAATATTTTTTATTT+CGG | - | chr5.4:73624801-73624820 | None:intergenic | 10.0% |
| !!! | TATAATCAATTTTGTTTTAT+AGG | + | chr5.4:73622110-73622129 | MS.gene64961:intron | 10.0% |
| !! | AAAATACATATAAAAGGAAA+TGG | - | chr5.4:73622833-73622852 | None:intergenic | 15.0% |
| !! | AGTCTATTTAGTAAATTATT+TGG | + | chr5.4:73624556-73624575 | MS.gene64961:intron | 15.0% |
| !! | TATCAATCAATCTTTAAATT+AGG | - | chr5.4:73625091-73625110 | None:intergenic | 15.0% |
| !! | TATTAAACTTGTATATGATA+TGG | - | chr5.4:73621699-73621718 | None:intergenic | 15.0% |
| !!! | ATTATGTACTGTTTTTAAAA+TGG | + | chr5.4:73624812-73624831 | MS.gene64961:intron | 15.0% |
| !!! | TATATGGTAATATTTTGATA+TGG | + | chr5.4:73620862-73620881 | MS.gene64961:intron | 15.0% |
| !!! | TTCTAAATAATGGAATATAA+AGG | + | chr5.4:73624909-73624928 | MS.gene64961:intron | 15.0% |
| !!! | TTTTTTTTTCCTTTAAATGT+TGG | - | chr5.4:73624150-73624169 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTCTTTCTTTTTC+TGG | + | chr5.4:73623923-73623942 | MS.gene64961:intron | 15.0% |
| !! | AAAAAAAATACTATGCAAGT+AGG | - | chr5.4:73624859-73624878 | None:intergenic | 20.0% |
| !! | AAAGTTATTACTGAAAAAAG+TGG | + | chr5.4:73622044-73622063 | MS.gene64961:intron | 20.0% |
| !! | ATGATTTCTGATATCTAAAT+TGG | + | chr5.4:73621595-73621614 | MS.gene64961:intron | 20.0% |
| !! | GAGATGTATATTCTAAATAA+TGG | + | chr5.4:73624899-73624918 | MS.gene64961:intron | 20.0% |
| !! | TATATTAGATCAGATTTCTA+AGG | + | chr5.4:73623754-73623773 | MS.gene64961:CDS | 20.0% |
| !! | TTAAGAAACCACATTAAAAA+TGG | - | chr5.4:73622665-73622684 | None:intergenic | 20.0% |
| !!! | AATTTTGTTTTATAGGTTAC+TGG | + | chr5.4:73622117-73622136 | MS.gene64961:intron | 20.0% |
| !!! | ACTAAACAATTTTTGTAATC+AGG | - | chr5.4:73621123-73621142 | None:intergenic | 20.0% |
| !!! | ACTTTTTTCAGTAATAACTT+TGG | - | chr5.4:73622045-73622064 | None:intergenic | 20.0% |
| !!! | AGTTACTAAATTTTCTGATA+TGG | + | chr5.4:73622167-73622186 | MS.gene64961:CDS | 20.0% |
| !!! | ATTGTTCTTAGTTTGTATTT+GGG | - | chr5.4:73624944-73624963 | None:intergenic | 20.0% |
| !!! | TTTAAGTTTTCAAAGTAATC+TGG | + | chr5.4:73621171-73621190 | MS.gene64961:intron | 20.0% |
| !!! | TTTCTTTTCCATTTTTAATG+TGG | + | chr5.4:73622654-73622673 | MS.gene64961:intron | 20.0% |
| !!! | TTTTCTGAATGAATTTTGTT+TGG | - | chr5.4:73621541-73621560 | None:intergenic | 20.0% |
| ! | AAAACATTCATGAGGAAATA+TGG | - | chr5.4:73622769-73622788 | None:intergenic | 25.0% |
| ! | AAAACTATTATGCTGTATGT+TGG | - | chr5.4:73623304-73623323 | None:intergenic | 25.0% |
| ! | AAACTTGTATATGATATGGT+AGG | - | chr5.4:73621695-73621714 | None:intergenic | 25.0% |
| ! | AAATTTGATCAAACAGAACT+TGG | + | chr5.4:73624324-73624343 | MS.gene64961:CDS | 25.0% |
| ! | AACAATTATACCATACACTA+TGG | - | chr5.4:73621250-73621269 | None:intergenic | 25.0% |
| ! | AACTTGTATATGATATGGTA+GGG | - | chr5.4:73621694-73621713 | None:intergenic | 25.0% |
| ! | AAGATATCCAAGAGAATAAT+AGG | - | chr5.4:73622199-73622218 | None:intergenic | 25.0% |
| ! | AGCATAAATCAATAATACCT+TGG | - | chr5.4:73621471-73621490 | None:intergenic | 25.0% |
| ! | ATTATTCTCTTGGATATCTT+AGG | + | chr5.4:73622199-73622218 | MS.gene64961:CDS | 25.0% |
| ! | ATTTCTGATATCTAAATTGG+AGG | + | chr5.4:73621598-73621617 | MS.gene64961:intron | 25.0% |
| ! | CAAATACAAACTAAGAACAA+TGG | + | chr5.4:73624943-73624962 | MS.gene64961:intron | 25.0% |
| ! | CAATTCCAATTATAGAATCA+AGG | - | chr5.4:73623146-73623165 | None:intergenic | 25.0% |
| ! | CATCTGAAAAAGAATTTAGA+AGG | + | chr5.4:73622537-73622556 | MS.gene64961:CDS | 25.0% |
| ! | CTTGATTCTATAATTGGAAT+TGG | + | chr5.4:73623144-73623163 | MS.gene64961:CDS | 25.0% |
| ! | CTTTATCTCAGTTTGATATA+TGG | + | chr5.4:73620846-73620865 | MS.gene64961:intron | 25.0% |
| ! | GAAAACTTAAACTCTAAATC+AGG | - | chr5.4:73621162-73621181 | None:intergenic | 25.0% |
| ! | GACTAAATAAAACATTCATG+AGG | - | chr5.4:73622777-73622796 | None:intergenic | 25.0% |
| ! | GATATTTGATTCTTGATCAA+CGG | - | chr5.4:73622942-73622961 | None:intergenic | 25.0% |
| ! | GTAAAATAGTGAAGTGTAAT+TGG | + | chr5.4:73620884-73620903 | MS.gene64961:intron | 25.0% |
| ! | GTACTCATAAAATAGAGAAA+AGG | + | chr5.4:73622308-73622327 | MS.gene64961:intron | 25.0% |
| ! | TAAGGTAACATTACATCATT+AGG | + | chr5.4:73623772-73623791 | MS.gene64961:intron | 25.0% |
| ! | TCACATACATGTATAGTTTA+TGG | + | chr5.4:73623352-73623371 | MS.gene64961:intron | 25.0% |
| ! | TTCTATACAAATAGTTACTC+AGG | + | chr5.4:73624408-73624427 | MS.gene64961:intron | 25.0% |
| ! | TTTATGAGTACAGATAACTT+TGG | - | chr5.4:73622299-73622318 | None:intergenic | 25.0% |
| !! | ACAGCATAATAGTTTTTCTT+TGG | + | chr5.4:73623308-73623327 | MS.gene64961:intron | 25.0% |
| !! | ATTCATATTGTCATTTCAGA+TGG | + | chr5.4:73623998-73624017 | MS.gene64961:intron | 25.0% |
| !! | ATTTGTGATAGCAGTTATTT+TGG | + | chr5.4:73623024-73623043 | MS.gene64961:intron | 25.0% |
| !! | TAACAATGTTTTACTTCAAC+AGG | + | chr5.4:73621776-73621795 | MS.gene64961:intron | 25.0% |
| !! | TACTAAATTTTCTGATATGG+AGG | + | chr5.4:73622170-73622189 | MS.gene64961:CDS | 25.0% |
| !! | TATACACTCATATCATCTTT+TGG | - | chr5.4:73624462-73624481 | None:intergenic | 25.0% |
| !! | TCAGAAATCCATTTAATTTC+TGG | - | chr5.4:73622455-73622474 | None:intergenic | 25.0% |
| !!! | CATTGTTCTTAGTTTGTATT+TGG | - | chr5.4:73624945-73624964 | None:intergenic | 25.0% |
| !!! | GGTTGCATTTTTCAATTTTA+AGG | + | chr5.4:73625035-73625054 | MS.gene64961:intron | 25.0% |
| !!! | TACTGAAAAAAGTGGATTAT+TGG | + | chr5.4:73622052-73622071 | MS.gene64961:intron | 25.0% |
| !!! | TTGTGCGTATTTAATTTTAC+AGG | + | chr5.4:73622880-73622899 | MS.gene64961:intron | 25.0% |
| !!! | TTTGTGATAGCAGTTATTTT+GGG | + | chr5.4:73623025-73623044 | MS.gene64961:intron | 25.0% |
| AAACATTATACTACGTATGC+AGG | + | chr5.4:73623075-73623094 | MS.gene64961:intron | 30.0% | |
| AAGGTTCAAGAAATACTAGA+AGG | + | chr5.4:73625132-73625151 | MS.gene64961:intron | 30.0% | |
| AATAACTTTGGACAAACGAT+TGG | - | chr5.4:73622033-73622052 | None:intergenic | 30.0% | |
| ACTATACAATCCATAGTGTA+TGG | + | chr5.4:73621237-73621256 | MS.gene64961:intron | 30.0% | |
| ACTTGGATTCCAACATTTAA+AGG | + | chr5.4:73624138-73624157 | MS.gene64961:intron | 30.0% | |
| AGAAAAAGTAACACATACTC+TGG | - | chr5.4:73620796-73620815 | None:intergenic | 30.0% | |
| AGAGAATTTGAAGAAGAAGA+AGG | - | chr5.4:73620582-73620601 | None:intergenic | 30.0% | |
| AGCAAGCAAATTCAAAAGTA+AGG | - | chr5.4:73624723-73624742 | None:intergenic | 30.0% | |
| ATAACAGACTCAAAAAAAGG+AGG | - | chr5.4:73622275-73622294 | None:intergenic | 30.0% | |
| ATACATGTATGTGAACAAGT+TGG | - | chr5.4:73623346-73623365 | None:intergenic | 30.0% | |
| ATAGATTCTGAACACTTGTT+TGG | - | chr5.4:73622746-73622765 | None:intergenic | 30.0% | |
| ATATATTTATGCTATCCTGC+AGG | + | chr5.4:73621367-73621386 | MS.gene64961:intron | 30.0% | |
| ATCTATTTGAACGTTCTTGA+AGG | + | chr5.4:73625113-73625132 | MS.gene64961:intron | 30.0% | |
| ATGCTCAAGATATTCATTCA+CGG | - | chr5.4:73624287-73624306 | None:intergenic | 30.0% | |
| ATGTTGCACCAGAAATTAAA+TGG | + | chr5.4:73622444-73622463 | MS.gene64961:CDS | 30.0% | |
| CATATCGAAAAAATGTTGTG+AGG | - | chr5.4:73623844-73623863 | None:intergenic | 30.0% | |
| CTTAAGAGAAGATAATGCTA+AGG | + | chr5.4:73621329-73621348 | MS.gene64961:intron | 30.0% | |
| CTTGAAGAAAGTGAATATTG+AGG | + | chr5.4:73621991-73622010 | MS.gene64961:intron | 30.0% | |
| CTTTATCCAATCAGAAAACT+TGG | + | chr5.4:73624121-73624140 | MS.gene64961:intron | 30.0% | |
| GAATTGTGAGTAAAATTCTC+CGG | + | chr5.4:73623647-73623666 | MS.gene64961:intron | 30.0% | |
| GGTATAACAGACTCAAAAAA+AGG | - | chr5.4:73622278-73622297 | None:intergenic | 30.0% | |
| GTATGGTATAATTGTTTCCA+TGG | + | chr5.4:73621254-73621273 | MS.gene64961:intron | 30.0% | |
| TAACCAACAAGAATACTTTC+CGG | - | chr5.4:73621831-73621850 | None:intergenic | 30.0% | |
| TCAATACCTGCATTTCTAAT+AGG | - | chr5.4:73624085-73624104 | None:intergenic | 30.0% | |
| TGAATATCTTGAGCATCATA+AGG | + | chr5.4:73624291-73624310 | MS.gene64961:CDS | 30.0% | |
| TGATGCATACAAAAACTTGA+AGG | + | chr5.4:73622475-73622494 | MS.gene64961:CDS | 30.0% | |
| TTTCTTCAAGATACTGCAAA+GGG | - | chr5.4:73621981-73622000 | None:intergenic | 30.0% | |
| ! | AAGTATTCTTGTTGGTTATG+TGG | + | chr5.4:73621833-73621852 | MS.gene64961:CDS | 30.0% |
| ! | AGTATTCTTGTTGGTTATGT+GGG | + | chr5.4:73621834-73621853 | MS.gene64961:CDS | 30.0% |
| ! | CAAAAGTCACTTCATTTTGT+AGG | + | chr5.4:73624999-73625018 | MS.gene64961:intron | 30.0% |
| ! | CAGCATGTTTTCTTAAAAGA+GGG | - | chr5.4:73621727-73621746 | None:intergenic | 30.0% |
| ! | TCATATCATCTTTTGGCAAT+GGG | - | chr5.4:73624455-73624474 | None:intergenic | 30.0% |
| ! | TGTTTTATAGGTTACTGGAA+GGG | + | chr5.4:73622122-73622141 | MS.gene64961:intron | 30.0% |
| !! | AGGATTCAATTTTGATACAG+AGG | + | chr5.4:73623095-73623114 | MS.gene64961:intron | 30.0% |
| !! | GCGTATTTAATTTTACAGGT+CGG | + | chr5.4:73622884-73622903 | MS.gene64961:intron | 30.0% |
| !! | TTCAATTTTGATACAGAGGA+TGG | + | chr5.4:73623099-73623118 | MS.gene64961:CDS | 30.0% |
| !! | TTGTGATAGCAGTTATTTTG+GGG | + | chr5.4:73623026-73623045 | MS.gene64961:intron | 30.0% |
| !! | TTGTTTTATAGGTTACTGGA+AGG | + | chr5.4:73622121-73622140 | MS.gene64961:intron | 30.0% |
| !!! | TCTCTTTTTGCTGTTTCAAA+AGG | - | chr5.4:73624883-73624902 | None:intergenic | 30.0% |
| !!! | TGAATGTTTTATTTAGTCGC+AGG | + | chr5.4:73622779-73622798 | MS.gene64961:intron | 30.0% |
| !!! | TTTTTAAAATGGACCGTGTA+GGG | + | chr5.4:73624823-73624842 | MS.gene64961:intron | 30.0% |
| AACCAACAAGAATACTTTCC+GGG | - | chr5.4:73621830-73621849 | None:intergenic | 35.0% | |
| AAGAAGGAAGAGAGAAAGAA+GGG | - | chr5.4:73620566-73620585 | None:intergenic | 35.0% | |
| AAGATACCGTGTAATCCTAT+CGG | - | chr5.4:73624973-73624992 | None:intergenic | 35.0% | |
| ACTATGACAATTGCACTTGA+GGG | - | chr5.4:73623595-73623614 | None:intergenic | 35.0% | |
| AGAAATACTAGAAGGAGCTA+AGG | + | chr5.4:73625140-73625159 | MS.gene64961:CDS | 35.0% | |
| AGATATTCATTCACGGACTT+TGG | - | chr5.4:73624280-73624299 | None:intergenic | 35.0% | |
| AGTTCAACTGAAGAAGAAGA+TGG | - | chr5.4:73620711-73620730 | None:intergenic | 35.0% | |
| ATATAGGCGTGAAAATATGC+AGG | + | chr5.4:73624360-73624379 | MS.gene64961:CDS | 35.0% | |
| ATGTTTCAGGAAAAACAAGG+GGG | - | chr5.4:73623191-73623210 | None:intergenic | 35.0% | |
| ATTATAGAATCAAGGAAGCC+TGG | - | chr5.4:73623138-73623157 | None:intergenic | 35.0% | |
| ATTCCTTCTGCTGAAAGTAA+AGG | + | chr5.4:73622968-73622987 | MS.gene64961:CDS | 35.0% | |
| ATTGCTGATAAACTTATCCC+TGG | + | chr5.4:73623538-73623557 | MS.gene64961:CDS | 35.0% | |
| CATGTTTCAGGAAAAACAAG+GGG | - | chr5.4:73623192-73623211 | None:intergenic | 35.0% | |
| CCATGTTTCAGGAAAAACAA+GGG | - | chr5.4:73623193-73623212 | None:intergenic | 35.0% | |
| CGAACTTTGTAAACTCAACT+AGG | - | chr5.4:73621448-73621467 | None:intergenic | 35.0% | |
| CTAACAATAAGTCTTTGACC+TGG | - | chr5.4:73623682-73623701 | None:intergenic | 35.0% | |
| CTACGATCGAATCAATATTG+AGG | + | chr5.4:73621877-73621896 | MS.gene64961:CDS | 35.0% | |
| CTCAATCAGATTAAACTGAG+TGG | - | chr5.4:73624489-73624508 | None:intergenic | 35.0% | |
| CTTTCTTCAAGATACTGCAA+AGG | - | chr5.4:73621982-73622001 | None:intergenic | 35.0% | |
| GAAACACATCATTATGCACA+AGG | - | chr5.4:73623880-73623899 | None:intergenic | 35.0% | |
| GAAGAAAGTGAATATTGAGG+AGG | + | chr5.4:73621994-73622013 | MS.gene64961:intron | 35.0% | |
| GAAGCTAGAGAACAACATAT+AGG | - | chr5.4:73624601-73624620 | None:intergenic | 35.0% | |
| GAAGTGTGATGAAAAAGAGA+TGG | - | chr5.4:73620663-73620682 | None:intergenic | 35.0% | |
| GAGGATACCTATTATTCTCT+TGG | + | chr5.4:73622189-73622208 | MS.gene64961:CDS | 35.0% | |
| GATGGTGAAATATTAGTACC+AGG | + | chr5.4:73623117-73623136 | MS.gene64961:CDS | 35.0% | |
| GCATACACAAACACAGATAA+AGG | - | chr5.4:73623406-73623425 | None:intergenic | 35.0% | |
| GCTTCTCTTTCATTTCTAAC+AGG | + | chr5.4:73623465-73623484 | MS.gene64961:intron | 35.0% | |
| GGCTTCCTTGATTCTATAAT+TGG | + | chr5.4:73623138-73623157 | MS.gene64961:CDS | 35.0% | |
| GGGGAGTAAAAATGTTCAAA+AGG | + | chr5.4:73621854-73621873 | MS.gene64961:CDS | 35.0% | |
| GTTGAATGAATGAAGATGAG+AGG | - | chr5.4:73620641-73620660 | None:intergenic | 35.0% | |
| TACACTCATAACATTCTTCC+AGG | - | chr5.4:73621075-73621094 | None:intergenic | 35.0% | |
| TACTATGACAATTGCACTTG+AGG | - | chr5.4:73623596-73623615 | None:intergenic | 35.0% | |
| TACTGAAGACATCATCAAAG+AGG | + | chr5.4:73624622-73624641 | MS.gene64961:CDS | 35.0% | |
| TCAAAAACAAGAATACGACG+AGG | + | chr5.4:73624673-73624692 | MS.gene64961:CDS | 35.0% | |
| TCCATGTTTCAGGAAAAACA+AGG | - | chr5.4:73623194-73623213 | None:intergenic | 35.0% | |
| TCTACCTTGTTCATCAAACA+AGG | - | chr5.4:73624045-73624064 | None:intergenic | 35.0% | |
| TCTATAATTGGAATTGGTCG+AGG | + | chr5.4:73623150-73623169 | MS.gene64961:CDS | 35.0% | |
| TCTCTTCCATGCAAAATTTG+AGG | + | chr5.4:73621638-73621657 | MS.gene64961:intron | 35.0% | |
| TGCTTCCGTTAAAGTTCAAT+GGG | - | chr5.4:73623436-73623455 | None:intergenic | 35.0% | |
| TGTTCATCAAACAAGGATTG+AGG | - | chr5.4:73624038-73624057 | None:intergenic | 35.0% | |
| TTGACGTTTGAATTCAGCAA+TGG | - | chr5.4:73624657-73624676 | None:intergenic | 35.0% | |
| TTGCTTCCGTTAAAGTTCAA+TGG | - | chr5.4:73623437-73623456 | None:intergenic | 35.0% | |
| TTGTGAGGTACATTCTAATC+TGG | - | chr5.4:73623829-73623848 | None:intergenic | 35.0% | |
| ! | CAATCCTTGTTTGATGAACA+AGG | + | chr5.4:73624038-73624057 | MS.gene64961:CDS | 35.0% |
| ! | CAGTAACCTCAAATTTTGCA+TGG | - | chr5.4:73621647-73621666 | None:intergenic | 35.0% |
| ! | CTCATATCATCTTTTGGCAA+TGG | - | chr5.4:73624456-73624475 | None:intergenic | 35.0% |
| ! | GCAGCATGTTTTCTTAAAAG+AGG | - | chr5.4:73621728-73621747 | None:intergenic | 35.0% |
| ! | GTATTCTTGTTGGTTATGTG+GGG | + | chr5.4:73621835-73621854 | MS.gene64961:CDS | 35.0% |
| ! | TCACTTCATTTTGTAGGCAA+TGG | + | chr5.4:73625005-73625024 | MS.gene64961:intron | 35.0% |
| ! | TGGAATCCAAGTTTTCTGAT+TGG | - | chr5.4:73624130-73624149 | None:intergenic | 35.0% |
| !! | AGTAACACATACTCTGGAAT+TGG | - | chr5.4:73620790-73620809 | None:intergenic | 35.0% |
| !! | ATGCAGGTATTGATTCAAGT+AGG | + | chr5.4:73624092-73624111 | MS.gene64961:intron | 35.0% |
| !! | TCTTTGATGATGTCTTCAGT+AGG | - | chr5.4:73624623-73624642 | None:intergenic | 35.0% |
| !!! | CTCGCTTATTTCACTTTTTC+AGG | + | chr5.4:73622405-73622424 | MS.gene64961:intron | 35.0% |
| !!! | GTTTTTAAAATGGACCGTGT+AGG | + | chr5.4:73624822-73624841 | MS.gene64961:intron | 35.0% |
| AAAACTAACTGAAGAGCAGC+TGG | + | chr5.4:73624240-73624259 | MS.gene64961:CDS | 40.0% | |
| AACAGCGGTATGTTGTAATC+TGG | + | chr5.4:73621920-73621939 | MS.gene64961:intron | 40.0% | |
| AAGAACAATGGCTATCCGAT+AGG | + | chr5.4:73624955-73624974 | MS.gene64961:intron | 40.0% | |
| AAGAGATAGAGCAAACAGCT+AGG | + | chr5.4:73623711-73623730 | MS.gene64961:CDS | 40.0% | |
| AATTGGACCTGAAATTTCGC+CGG | + | chr5.4:73620901-73620920 | MS.gene64961:intron | 40.0% | |
| ACAAGTGTCAGTTAGTTGAC+TGG | - | chr5.4:73622634-73622653 | None:intergenic | 40.0% | |
| ACGAGCCCATTGAACTTTAA+CGG | + | chr5.4:73623428-73623447 | MS.gene64961:intron | 40.0% | |
| AGAGATAGAGCAAACAGCTA+GGG | + | chr5.4:73623712-73623731 | MS.gene64961:CDS | 40.0% | |
| ATCAAACAGAACTTGGCAGT+TGG | + | chr5.4:73624331-73624350 | MS.gene64961:CDS | 40.0% | |
| ATCCAGCCTATTAGAAATGC+AGG | + | chr5.4:73624076-73624095 | MS.gene64961:CDS | 40.0% | |
| ATCTGCAGTGTAGAAGTCAT+CGG | - | chr5.4:73622366-73622385 | None:intergenic | 40.0% | |
| ATTGAAGGTCACTGAGACAA+AGG | + | chr5.4:73620761-73620780 | MS.gene64961:CDS | 40.0% | |
| CGATCGAATCAATATTGAGG+AGG | + | chr5.4:73621880-73621899 | MS.gene64961:CDS | 40.0% | |
| CTACCTTTACTTTCAGCAGA+AGG | - | chr5.4:73622974-73622993 | None:intergenic | 40.0% | |
| CTGAAAGTTGTTACTGACAG+AGG | + | chr5.4:73622581-73622600 | MS.gene64961:CDS | 40.0% | |
| CTTCTGCTGAAAGTAAAGGT+AGG | + | chr5.4:73622972-73622991 | MS.gene64961:intron | 40.0% | |
| GAACAAGGTAGACAGCTATA+TGG | + | chr5.4:73624053-73624072 | MS.gene64961:CDS | 40.0% | |
| GAAGAAGGAAGAGAGAAAGA+AGG | - | chr5.4:73620567-73620586 | None:intergenic | 40.0% | |
| GAATGAAGATGAGAGGTTGA+AGG | - | chr5.4:73620634-73620653 | None:intergenic | 40.0% | |
| GAGGTTGAAGGAGTTGAATT+TGG | - | chr5.4:73620622-73620641 | None:intergenic | 40.0% | |
| TAAACTGAGCATGAACACCT+TGG | - | chr5.4:73623230-73623249 | None:intergenic | 40.0% | |
| TACCTGCATTTCTAATAGGC+TGG | - | chr5.4:73624081-73624100 | None:intergenic | 40.0% | |
| TAGCTGTTTGCTCTATCTCT+TGG | - | chr5.4:73623712-73623731 | None:intergenic | 40.0% | |
| TAGGTGATGTGCTTGCAAAA+TGG | + | chr5.4:73622991-73623010 | MS.gene64961:intron | 40.0% | |
| TGAGTTTACAAAGTTCGCCA+AGG | + | chr5.4:73621451-73621470 | MS.gene64961:CDS | 40.0% | |
| TGGATTTCGTCCTGGAAAAA+AGG | + | chr5.4:73621803-73621822 | MS.gene64961:CDS | 40.0% | |
| TTACAGAGATTTACCAGAGC+TGG | + | chr5.4:73623507-73623526 | MS.gene64961:CDS | 40.0% | |
| TTTGACCTGGAAATTCATGC+CGG | - | chr5.4:73623669-73623688 | None:intergenic | 40.0% | |
| TTTGTAGGCAATGGTCGTTT+AGG | + | chr5.4:73625014-73625033 | MS.gene64961:intron | 40.0% | |
| ! | GTTTTACTTCAACAGGTACC+TGG | + | chr5.4:73621783-73621802 | MS.gene64961:intron | 40.0% |
| ! | TTGTTTCCATGGAAGAGTGT+AGG | + | chr5.4:73621265-73621284 | MS.gene64961:intron | 40.0% |
| ! | TTTTCCTGAAACATGGAAGC+AGG | + | chr5.4:73623197-73623216 | MS.gene64961:CDS | 40.0% |
| ! | TTTTCCTGCTTCCATGTTTC+AGG | - | chr5.4:73623204-73623223 | None:intergenic | 40.0% |
| !! | AGGAAGTGTTTATCCCTACA+CGG | - | chr5.4:73624839-73624858 | None:intergenic | 40.0% |
| !! | TGGCAGTTGGTGACATATAT+AGG | + | chr5.4:73624344-73624363 | MS.gene64961:CDS | 40.0% |
| !!! | CCCTTGTTTTTCCTGAAACA+TGG | + | chr5.4:73623190-73623209 | MS.gene64961:CDS | 40.0% |
| !!! | TTTTTTCCAGGACGAAATCC+AGG | - | chr5.4:73621804-73621823 | None:intergenic | 40.0% |
| AAAAGTCACCTGTTGCACTG+TGG | - | chr5.4:73623569-73623588 | None:intergenic | 45.0% | |
| ACATCTAGTGTAGCTAGTCC+TGG | + | chr5.4:73621054-73621073 | MS.gene64961:intron | 45.0% | |
| ACTTTCACACGCTGTAACAG+CGG | + | chr5.4:73621905-73621924 | MS.gene64961:CDS | 45.0% | |
| ATACGACGAGGAACGTGTAA+AGG | + | chr5.4:73624685-73624704 | MS.gene64961:CDS | 45.0% | |
| ATGCGAGGACTGTTACGAAA+GGG | + | chr5.4:73621421-73621440 | MS.gene64961:CDS | 45.0% | |
| ATTCTCCGGCATGAATTTCC+AGG | + | chr5.4:73623661-73623680 | MS.gene64961:intron | 45.0% | |
| CCTTCAATTCAGCAGGAAGA+CGG | - | chr5.4:73620749-73620768 | None:intergenic | 45.0% | |
| CGTTATAAAACGACTCGCAG+AGG | - | chr5.4:73622710-73622729 | None:intergenic | 45.0% | |
| GCAATAGAATCATCCAGCTC+TGG | - | chr5.4:73623523-73623542 | None:intergenic | 45.0% | |
| GCATGGAAGAGAATGTAGAG+TGG | - | chr5.4:73621630-73621649 | None:intergenic | 45.0% | |
| GGCTATCCGATAGGATTACA+CGG | + | chr5.4:73624964-73624983 | MS.gene64961:intron | 45.0% | |
| TATGCGAGGACTGTTACGAA+AGG | + | chr5.4:73621420-73621439 | MS.gene64961:CDS | 45.0% | |
| TCAGTGACCTTCAATTCAGC+AGG | - | chr5.4:73620756-73620775 | None:intergenic | 45.0% | |
| TGGAAGCAGGAAAATCTCCA+AGG | + | chr5.4:73623210-73623229 | MS.gene64961:CDS | 45.0% | |
| TGTTACTGACAGAGGACTAC+AGG | + | chr5.4:73622589-73622608 | MS.gene64961:CDS | 45.0% | |
| ! | AAGGAGCTAAGGTGCTAGAA+TGG | + | chr5.4:73625151-73625170 | MS.gene64961:CDS | 45.0% |
| !! | CAGGAAGACGGTCATTTTCT+GGG | - | chr5.4:73620737-73620756 | None:intergenic | 45.0% |
| !! | GTCCCGGAAAGTATTCTTGT+TGG | + | chr5.4:73621825-73621844 | MS.gene64961:CDS | 45.0% |
| !! | AATTATAAAATACATATAAA+AGG | - | chr5.4:73622839-73622858 | None:intergenic | 5.0% |
| ATTTCGCCGGCGCAATAGTA+TGG | + | chr5.4:73620914-73620933 | MS.gene64961:intron | 50.0% | |
| CCACATGCAATCTAACCTGC+AGG | - | chr5.4:73621385-73621404 | None:intergenic | 50.0% | |
| CCGTCTTCCTGCTGAATTGA+AGG | + | chr5.4:73620746-73620765 | MS.gene64961:CDS | 50.0% | |
| CCTGCAGGTTAGATTGCATG+TGG | + | chr5.4:73621382-73621401 | MS.gene64961:intron | 50.0% | |
| CGAGGAACGTGTAAAGGAAC+AGG | + | chr5.4:73624691-73624710 | MS.gene64961:CDS | 50.0% | |
| CTTGCACCTACACTCTTCCA+TGG | - | chr5.4:73621274-73621293 | None:intergenic | 50.0% | |
| GCAGGTTAGATTGCATGTGG+AGG | + | chr5.4:73621385-73621404 | MS.gene64961:intron | 50.0% | |
| GGAGAAGCTGAGACAGTGAA+GGG | - | chr5.4:73620690-73620709 | None:intergenic | 50.0% | |
| GTCTTCCCATACTATTGCGC+CGG | - | chr5.4:73620923-73620942 | None:intergenic | 50.0% | |
| GTTGCACTGTGGTACATCCA+GGG | - | chr5.4:73623558-73623577 | None:intergenic | 50.0% | |
| TACTGCAAAGGGAGAACGCA+AGG | - | chr5.4:73621970-73621989 | None:intergenic | 50.0% | |
| TCGTCCTGGAAAAAAGGTCC+CGG | + | chr5.4:73621809-73621828 | MS.gene64961:CDS | 50.0% | |
| TGGAGAAGCTGAGACAGTGA+AGG | - | chr5.4:73620691-73620710 | None:intergenic | 50.0% | |
| TGGATGTACCACAGTGCAAC+AGG | + | chr5.4:73623558-73623577 | MS.gene64961:CDS | 50.0% | |
| TGTTGCACTGTGGTACATCC+AGG | - | chr5.4:73623559-73623578 | None:intergenic | 50.0% | |
| TTTCGCCGGCGCAATAGTAT+GGG | + | chr5.4:73620915-73620934 | MS.gene64961:intron | 50.0% | |
| ! | TATTGCGCCGGCGAAATTTC+AGG | - | chr5.4:73620911-73620930 | None:intergenic | 50.0% |
| !! | AGAAGGCGTTACAAGTCAGC+TGG | + | chr5.4:73622554-73622573 | MS.gene64961:CDS | 50.0% |
| !! | GCAGGAAGACGGTCATTTTC+TGG | - | chr5.4:73620738-73620757 | None:intergenic | 50.0% |
| !!! | CTTTCCGGGACCTTTTTTCC+AGG | - | chr5.4:73621816-73621835 | None:intergenic | 50.0% |
| CAGGTACCTGGATTTCGTCC+TGG | + | chr5.4:73621795-73621814 | MS.gene64961:intron | 55.0% | |
| CAGTCCTCGCATACCAGTGA+TGG | - | chr5.4:73621413-73621432 | None:intergenic | 55.0% | |
| GGTACCATCACTGGTATGCG+AGG | + | chr5.4:73621406-73621425 | MS.gene64961:CDS | 55.0% | |
| GGTTACTGGAAGGGCTTTGC+AGG | + | chr5.4:73622131-73622150 | MS.gene64961:intron | 55.0% | |
| !! | GCATGTGGAGGTACCATCAC+TGG | + | chr5.4:73621397-73621416 | MS.gene64961:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 73620516 | 73625212 | 73620516 | ID=MS.gene64961 |
| chr5.4 | mRNA | 73620516 | 73625212 | 73620516 | ID=MS.gene64961.t1;Parent=MS.gene64961 |
| chr5.4 | exon | 73620516 | 73620797 | 73620516 | ID=MS.gene64961.t1.exon1;Parent=MS.gene64961.t1 |
| chr5.4 | CDS | 73620516 | 73620797 | 73620516 | ID=cds.MS.gene64961.t1;Parent=MS.gene64961.t1 |
| chr5.4 | exon | 73621389 | 73621472 | 73621389 | ID=MS.gene64961.t1.exon2;Parent=MS.gene64961.t1 |
| chr5.4 | CDS | 73621389 | 73621472 | 73621389 | ID=cds.MS.gene64961.t1;Parent=MS.gene64961.t1 |
| chr5.4 | exon | 73621798 | 73621926 | 73621798 | ID=MS.gene64961.t1.exon3;Parent=MS.gene64961.t1 |
| chr5.4 | CDS | 73621798 | 73621926 | 73621798 | ID=cds.MS.gene64961.t1;Parent=MS.gene64961.t1 |
| chr5.4 | exon | 73622132 | 73622220 | 73622132 | ID=MS.gene64961.t1.exon4;Parent=MS.gene64961.t1 |
| chr5.4 | CDS | 73622132 | 73622220 | 73622132 | ID=cds.MS.gene64961.t1;Parent=MS.gene64961.t1 |
| chr5.4 | exon | 73622427 | 73622610 | 73622427 | ID=MS.gene64961.t1.exon5;Parent=MS.gene64961.t1 |
| chr5.4 | CDS | 73622427 | 73622610 | 73622427 | ID=cds.MS.gene64961.t1;Parent=MS.gene64961.t1 |
| chr5.4 | exon | 73622902 | 73622989 | 73622902 | ID=MS.gene64961.t1.exon6;Parent=MS.gene64961.t1 |
| chr5.4 | CDS | 73622902 | 73622989 | 73622902 | ID=cds.MS.gene64961.t1;Parent=MS.gene64961.t1 |
| chr5.4 | exon | 73623097 | 73623251 | 73623097 | ID=MS.gene64961.t1.exon7;Parent=MS.gene64961.t1 |
| chr5.4 | CDS | 73623097 | 73623251 | 73623097 | ID=cds.MS.gene64961.t1;Parent=MS.gene64961.t1 |
| chr5.4 | exon | 73623487 | 73623579 | 73623487 | ID=MS.gene64961.t1.exon8;Parent=MS.gene64961.t1 |
| chr5.4 | CDS | 73623487 | 73623579 | 73623487 | ID=cds.MS.gene64961.t1;Parent=MS.gene64961.t1 |
| chr5.4 | exon | 73623683 | 73623775 | 73623683 | ID=MS.gene64961.t1.exon9;Parent=MS.gene64961.t1 |
| chr5.4 | CDS | 73623683 | 73623775 | 73623683 | ID=cds.MS.gene64961.t1;Parent=MS.gene64961.t1 |
| chr5.4 | exon | 73624017 | 73624097 | 73624017 | ID=MS.gene64961.t1.exon10;Parent=MS.gene64961.t1 |
| chr5.4 | CDS | 73624017 | 73624097 | 73624017 | ID=cds.MS.gene64961.t1;Parent=MS.gene64961.t1 |
| chr5.4 | exon | 73624232 | 73624381 | 73624232 | ID=MS.gene64961.t1.exon11;Parent=MS.gene64961.t1 |
| chr5.4 | CDS | 73624232 | 73624381 | 73624232 | ID=cds.MS.gene64961.t1;Parent=MS.gene64961.t1 |
| chr5.4 | exon | 73624617 | 73624712 | 73624617 | ID=MS.gene64961.t1.exon12;Parent=MS.gene64961.t1 |
| chr5.4 | CDS | 73624617 | 73624712 | 73624617 | ID=cds.MS.gene64961.t1;Parent=MS.gene64961.t1 |
| chr5.4 | exon | 73625135 | 73625212 | 73625135 | ID=MS.gene64961.t1.exon13;Parent=MS.gene64961.t1 |
| chr5.4 | CDS | 73625135 | 73625212 | 73625135 | ID=cds.MS.gene64961.t1;Parent=MS.gene64961.t1 |
| Gene Sequence |
| Protein sequence |
