Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81748.t1 | XP_013467985.1 | 96.9 | 225 | 7 | 0 | 1 | 225 | 1 | 225 | 4.90E-123 | 450.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81748.t1 | O04846 | 42.3 | 220 | 124 | 2 | 6 | 225 | 11 | 227 | 1.1e-49 | 198.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81748.t1 | A0A072VJP4 | 96.9 | 225 | 7 | 0 | 1 | 225 | 1 | 225 | 3.5e-123 | 450.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene81748 | 0.805555 | 1.26E-49 | -1.69E-46 |
| MS.gene049222 | MS.gene81748 | 0.839798 | 1.28E-57 | -1.69E-46 |
| MS.gene049232 | MS.gene81748 | 0.84276 | 2.12E-58 | -1.69E-46 |
| MS.gene049285 | MS.gene81748 | 0.811318 | 7.43E-51 | -1.69E-46 |
| MS.gene049320 | MS.gene81748 | 0.812428 | 4.26E-51 | -1.69E-46 |
| MS.gene049369 | MS.gene81748 | 0.820496 | 6.65E-53 | -1.69E-46 |
| MS.gene049396 | MS.gene81748 | 0.836022 | 1.19E-56 | -1.69E-46 |
| MS.gene049609 | MS.gene81748 | 0.840509 | 8.33E-58 | -1.69E-46 |
| MS.gene049633 | MS.gene81748 | 0.800378 | 1.48E-48 | -1.69E-46 |
| MS.gene049656 | MS.gene81748 | 0.811148 | 8.09E-51 | -1.69E-46 |
| MS.gene049865 | MS.gene81748 | 0.806237 | 9.07E-50 | -1.69E-46 |
| MS.gene049907 | MS.gene81748 | 0.808207 | 3.47E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene81748 | 0.81227 | 4.61E-51 | -1.69E-46 |
| MS.gene050323 | MS.gene81748 | 0.806559 | 7.76E-50 | -1.69E-46 |
| MS.gene050499 | MS.gene81748 | 0.824429 | 8.11E-54 | -1.69E-46 |
| MS.gene050502 | MS.gene81748 | 0.838053 | 3.61E-57 | -1.69E-46 |
| MS.gene050520 | MS.gene81748 | 0.812759 | 3.61E-51 | -1.69E-46 |
| MS.gene050538 | MS.gene81748 | 0.806564 | 7.74E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene81748 | 0.819266 | 1.27E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene81748 | 0.844238 | 8.55E-59 | -1.69E-46 |
| MS.gene050772 | MS.gene81748 | 0.85884 | 6.25E-63 | -1.69E-46 |
| MS.gene05080 | MS.gene81748 | 0.807367 | 5.23E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene81748 | 0.821201 | 4.58E-53 | -1.69E-46 |
| MS.gene050871 | MS.gene81748 | 0.822131 | 2.79E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene81748 | 0.844184 | 8.85E-59 | -1.69E-46 |
| MS.gene05105 | MS.gene81748 | 0.816646 | 4.97E-52 | -1.69E-46 |
| MS.gene051255 | MS.gene81748 | 0.804985 | 1.66E-49 | -1.69E-46 |
| MS.gene051509 | MS.gene81748 | 0.845722 | 3.40E-59 | -1.69E-46 |
| MS.gene051551 | MS.gene81748 | 0.810324 | 1.22E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene81748 | 0.801203 | 1.01E-48 | -1.69E-46 |
| MS.gene051692 | MS.gene81748 | 0.804026 | 2.63E-49 | -1.69E-46 |
| MS.gene051734 | MS.gene81748 | 0.835104 | 2.04E-56 | -1.69E-46 |
| MS.gene051858 | MS.gene81748 | 0.824096 | 9.71E-54 | -1.69E-46 |
| MS.gene052164 | MS.gene81748 | 0.843179 | 1.64E-58 | -1.69E-46 |
| MS.gene052346 | MS.gene81748 | 0.825617 | 4.25E-54 | -1.69E-46 |
| MS.gene052414 | MS.gene81748 | 0.824694 | 7.02E-54 | -1.69E-46 |
| MS.gene052482 | MS.gene81748 | 0.823291 | 1.50E-53 | -1.69E-46 |
| MS.gene052484 | MS.gene81748 | 0.804413 | 2.19E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene81748 | 0.832756 | 7.88E-56 | -1.69E-46 |
| MS.gene052501 | MS.gene81748 | 0.812549 | 4.01E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene81748 | 0.827808 | 1.28E-54 | -1.69E-46 |
| MS.gene052823 | MS.gene81748 | 0.821408 | 4.10E-53 | -1.69E-46 |
| MS.gene052825 | MS.gene81748 | 0.815784 | 7.74E-52 | -1.69E-46 |
| MS.gene052966 | MS.gene81748 | 0.833387 | 5.49E-56 | -1.69E-46 |
| MS.gene052982 | MS.gene81748 | 0.805583 | 1.24E-49 | -1.69E-46 |
| MS.gene053018 | MS.gene81748 | 0.808924 | 2.44E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene81748 | 0.82531 | 5.03E-54 | -1.69E-46 |
| MS.gene053207 | MS.gene81748 | 0.815341 | 9.72E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene81748 | 0.843454 | 1.39E-58 | -1.69E-46 |
| MS.gene053286 | MS.gene81748 | 0.840215 | 9.94E-58 | -1.69E-46 |
| MS.gene053436 | MS.gene81748 | 0.836412 | 9.50E-57 | -1.69E-46 |
| MS.gene053449 | MS.gene81748 | 0.805962 | 1.04E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene81748 | 0.887778 | 1.06E-72 | -1.69E-46 |
| MS.gene053626 | MS.gene81748 | 0.821457 | 4.00E-53 | -1.69E-46 |
| MS.gene053824 | MS.gene81748 | 0.826878 | 2.13E-54 | -1.69E-46 |
| MS.gene054003 | MS.gene81748 | 0.81619 | 6.28E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene81748 | 0.814578 | 1.43E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene81748 | 0.820348 | 7.19E-53 | -1.69E-46 |
| MS.gene054642 | MS.gene81748 | 0.803833 | 2.89E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene81748 | 0.850036 | 2.20E-60 | -1.69E-46 |
| MS.gene05492 | MS.gene81748 | 0.820371 | 7.11E-53 | -1.69E-46 |
| MS.gene05505 | MS.gene81748 | 0.815497 | 8.97E-52 | -1.69E-46 |
| MS.gene055212 | MS.gene81748 | 0.815948 | 7.12E-52 | -1.69E-46 |
| MS.gene055224 | MS.gene81748 | 0.808359 | 3.22E-50 | -1.69E-46 |
| MS.gene055289 | MS.gene81748 | 0.816756 | 4.69E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene81748 | 0.817559 | 3.10E-52 | -1.69E-46 |
| MS.gene055502 | MS.gene81748 | 0.809505 | 1.83E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene81748 | 0.820606 | 6.28E-53 | -1.69E-46 |
| MS.gene055722 | MS.gene81748 | 0.873528 | 1.37E-67 | -1.69E-46 |
| MS.gene05589 | MS.gene81748 | 0.804128 | 2.51E-49 | -1.69E-46 |
| MS.gene055909 | MS.gene81748 | 0.821415 | 4.09E-53 | -1.69E-46 |
| MS.gene055911 | MS.gene81748 | 0.818132 | 2.30E-52 | -1.69E-46 |
| MS.gene055941 | MS.gene81748 | 0.807286 | 5.44E-50 | -1.69E-46 |
| MS.gene056040 | MS.gene81748 | 0.800431 | 1.45E-48 | -1.69E-46 |
| MS.gene056166 | MS.gene81748 | 0.867525 | 1.28E-65 | -1.69E-46 |
| MS.gene056422 | MS.gene81748 | 0.833484 | 5.19E-56 | -1.69E-46 |
| MS.gene056448 | MS.gene81748 | 0.854963 | 8.67E-62 | -1.69E-46 |
| MS.gene056504 | MS.gene81748 | 0.830572 | 2.72E-55 | -1.69E-46 |
| MS.gene056510 | MS.gene81748 | 0.803353 | 3.63E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene81748 | 0.811354 | 7.30E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene81748 | 0.824116 | 9.61E-54 | -1.69E-46 |
| MS.gene05666 | MS.gene81748 | 0.80868 | 2.75E-50 | -1.69E-46 |
| MS.gene056878 | MS.gene81748 | 0.837021 | 6.65E-57 | -1.69E-46 |
| MS.gene056946 | MS.gene81748 | 0.800475 | 1.42E-48 | -1.69E-46 |
| MS.gene057076 | MS.gene81748 | 0.816935 | 4.28E-52 | -1.69E-46 |
| MS.gene057289 | MS.gene81748 | 0.803801 | 2.93E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene81748 | 0.834074 | 3.70E-56 | -1.69E-46 |
| MS.gene057416 | MS.gene81748 | 0.820144 | 8.01E-53 | -1.69E-46 |
| MS.gene057734 | MS.gene81748 | 0.846715 | 1.82E-59 | -1.69E-46 |
| MS.gene057831 | MS.gene81748 | 0.804015 | 2.65E-49 | -1.69E-46 |
| MS.gene05787 | MS.gene81748 | 0.804402 | 2.20E-49 | -1.69E-46 |
| MS.gene057926 | MS.gene81748 | 0.813812 | 2.12E-51 | -1.69E-46 |
| MS.gene058019 | MS.gene81748 | 0.810034 | 1.41E-50 | -1.69E-46 |
| MS.gene058120 | MS.gene81748 | 0.806664 | 7.37E-50 | -1.69E-46 |
| MS.gene058338 | MS.gene81748 | 0.825822 | 3.80E-54 | -1.69E-46 |
| MS.gene05837 | MS.gene81748 | 0.820841 | 5.54E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene81748 | 0.808776 | 2.62E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene81748 | 0.805092 | 1.58E-49 | -1.69E-46 |
| MS.gene05883 | MS.gene81748 | 0.807589 | 4.69E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene81748 | 0.807902 | 4.03E-50 | -1.69E-46 |
| MS.gene059023 | MS.gene81748 | 0.808781 | 2.62E-50 | -1.69E-46 |
| MS.gene05913 | MS.gene81748 | 0.836537 | 8.83E-57 | -1.69E-46 |
| MS.gene05934 | MS.gene81748 | 0.819285 | 1.26E-52 | -1.69E-46 |
| MS.gene059367 | MS.gene81748 | 0.83554 | 1.58E-56 | -1.69E-46 |
| MS.gene059368 | MS.gene81748 | 0.818757 | 1.66E-52 | -1.69E-46 |
| MS.gene059455 | MS.gene81748 | 0.821455 | 4.00E-53 | -1.69E-46 |
| MS.gene059517 | MS.gene81748 | 0.825882 | 3.68E-54 | -1.69E-46 |
| MS.gene059536 | MS.gene81748 | 0.809151 | 2.18E-50 | -1.69E-46 |
| MS.gene059667 | MS.gene81748 | 0.81802 | 2.44E-52 | -1.69E-46 |
| MS.gene059680 | MS.gene81748 | 0.83619 | 1.08E-56 | -1.69E-46 |
| MS.gene059711 | MS.gene81748 | 0.815125 | 1.09E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene81748 | 0.824836 | 6.50E-54 | -1.69E-46 |
| MS.gene059801 | MS.gene81748 | 0.810122 | 1.35E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene81748 | 0.818346 | 2.06E-52 | -1.69E-46 |
| MS.gene059902 | MS.gene81748 | 0.823164 | 1.61E-53 | -1.69E-46 |
| MS.gene060482 | MS.gene81748 | 0.874894 | 4.73E-68 | -1.69E-46 |
| MS.gene060703 | MS.gene81748 | 0.802927 | 4.45E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene81748 | 0.802475 | 5.51E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene81748 | 0.824835 | 6.51E-54 | -1.69E-46 |
| MS.gene060804 | MS.gene81748 | 0.833986 | 3.89E-56 | -1.69E-46 |
| MS.gene060835 | MS.gene81748 | 0.837566 | 4.82E-57 | -1.69E-46 |
| MS.gene060837 | MS.gene81748 | 0.872591 | 2.83E-67 | -1.69E-46 |
| MS.gene06092 | MS.gene81748 | 0.800723 | 1.26E-48 | -1.69E-46 |
| MS.gene06097 | MS.gene81748 | 0.841809 | 3.79E-58 | -1.69E-46 |
| MS.gene060982 | MS.gene81748 | 0.805469 | 1.31E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81748.t1 | MTR_1g059960 | 96.460 | 226 | 8 | 0 | 1 | 226 | 1 | 226 | 9.96e-165 | 457 |
| MS.gene81748.t1 | MTR_1g059960 | 96.059 | 203 | 8 | 0 | 24 | 226 | 3 | 205 | 5.73e-147 | 411 |
| MS.gene81748.t1 | MTR_1g059940 | 82.743 | 226 | 39 | 0 | 1 | 226 | 1 | 226 | 1.20e-139 | 394 |
| MS.gene81748.t1 | MTR_1g059900 | 84.375 | 160 | 25 | 0 | 67 | 226 | 1 | 160 | 1.25e-99 | 290 |
| MS.gene81748.t1 | MTR_7g102960 | 40.000 | 225 | 119 | 5 | 7 | 222 | 9 | 226 | 1.39e-49 | 165 |
| MS.gene81748.t1 | MTR_1g062880 | 41.885 | 191 | 102 | 3 | 35 | 222 | 48 | 232 | 1.01e-47 | 160 |
| MS.gene81748.t1 | MTR_0219s0070 | 38.961 | 231 | 128 | 7 | 2 | 225 | 6 | 230 | 1.19e-46 | 157 |
| MS.gene81748.t1 | MTR_1g062860 | 35.135 | 222 | 134 | 4 | 9 | 225 | 19 | 235 | 2.40e-46 | 157 |
| MS.gene81748.t1 | MTR_7g090950 | 35.242 | 227 | 128 | 4 | 10 | 226 | 8 | 225 | 5.97e-42 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81748.t1 | AT3G52720 | 42.152 | 223 | 126 | 2 | 6 | 228 | 11 | 230 | 4.15e-64 | 201 |
| MS.gene81748.t1 | AT3G52720 | 42.273 | 220 | 124 | 2 | 6 | 225 | 11 | 227 | 1.57e-62 | 198 |
| MS.gene81748.t1 | AT3G52720 | 42.273 | 220 | 124 | 2 | 6 | 225 | 11 | 227 | 1.57e-62 | 198 |
| MS.gene81748.t1 | AT3G52720 | 42.273 | 220 | 124 | 2 | 6 | 225 | 11 | 227 | 1.57e-62 | 198 |
| MS.gene81748.t1 | AT2G28210 | 37.826 | 230 | 128 | 6 | 5 | 225 | 10 | 233 | 1.10e-48 | 162 |
| MS.gene81748.t1 | AT1G08080 | 39.196 | 199 | 115 | 2 | 27 | 225 | 41 | 233 | 1.29e-47 | 160 |
| MS.gene81748.t1 | AT1G08065 | 35.714 | 224 | 130 | 4 | 7 | 222 | 10 | 227 | 2.27e-43 | 149 |
| MS.gene81748.t1 | AT4G20990 | 37.113 | 194 | 112 | 4 | 34 | 227 | 44 | 227 | 5.28e-43 | 147 |
| MS.gene81748.t1 | AT4G21000 | 38.095 | 189 | 107 | 4 | 34 | 222 | 45 | 223 | 4.38e-42 | 145 |
| MS.gene81748.t1 | AT5G04180 | 37.500 | 224 | 125 | 7 | 9 | 225 | 5 | 220 | 3.22e-41 | 143 |
| MS.gene81748.t1 | AT5G56330 | 38.462 | 169 | 95 | 4 | 24 | 184 | 136 | 303 | 1.70e-30 | 116 |
| MS.gene81748.t1 | AT5G56330 | 38.065 | 155 | 91 | 3 | 24 | 174 | 136 | 289 | 1.46e-29 | 114 |
| MS.gene81748.t1 | AT2G28210 | 39.850 | 133 | 71 | 4 | 5 | 128 | 10 | 142 | 1.69e-24 | 96.7 |
Find 67 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCTAAGGGTTTCAATTCT+TGG | 0.170815 | 1.3:+43469233 | None:intergenic |
| AAACGTGCCAAGGGCAATTT+TGG | 0.183202 | 1.3:+43467611 | None:intergenic |
| TATTGCAGCCCTCTACAATT+TGG | 0.195816 | 1.3:-43467927 | MS.gene81748:CDS |
| GTGGGAGATATTAATATAAA+TGG | 0.232737 | 1.3:-43468858 | MS.gene81748:CDS |
| AGGATGGTAGTTTCTGTCTA+AGG | 0.282486 | 1.3:+43469219 | None:intergenic |
| TTAACAAGTGTAGCATTTGT+AGG | 0.319349 | 1.3:+43469199 | None:intergenic |
| CCCCACTTCTCAGGACCATT+TGG | 0.327367 | 1.3:+43469340 | None:intergenic |
| TTAACAACCAATTCAACATT+GGG | 0.341353 | 1.3:-43469180 | MS.gene81748:CDS |
| ATGTAGAGGAAATAAATAAA+AGG | 0.341861 | 1.3:-43467587 | MS.gene81748:CDS |
| TACATACCCCAATGTTGAAT+TGG | 0.343928 | 1.3:+43469173 | None:intergenic |
| AATTCTTCTTATTGCAACTT+TGG | 0.348144 | 1.3:-43469549 | MS.gene81748:CDS |
| CAACATATCTATAATATCTA+TGG | 0.348697 | 1.3:+43467562 | None:intergenic |
| ATTCATTGAAACAACTTCAT+TGG | 0.362363 | 1.3:-43468827 | MS.gene81748:CDS |
| ATTGCAGCCCTCTACAATTT+GGG | 0.374926 | 1.3:-43467926 | MS.gene81748:CDS |
| CATGCAAAGAAGGTGTCATT+TGG | 0.384098 | 1.3:-43467521 | MS.gene81748:CDS |
| TCGTTTGCAGCATGCTCAAA+TGG | 0.388881 | 1.3:-43469304 | MS.gene81748:CDS |
| AACTCTACCTTGGAGATTAG+AGG | 0.392300 | 1.3:+43467893 | None:intergenic |
| GGCATGCTCCTGCAGAGCAC+CGG | 0.395484 | 1.3:-43468806 | MS.gene81748:CDS |
| CCATGAGCCCGGTGCTCTGC+AGG | 0.396230 | 1.3:+43468798 | None:intergenic |
| CTCAGGGTTCCCCACTTCTC+AGG | 0.400725 | 1.3:+43469331 | None:intergenic |
| TTTAGTTATATTGGACCAAA+TGG | 0.408021 | 1.3:-43469355 | MS.gene81748:CDS |
| AGCACAAAGTCCAGTGGAAC+TGG | 0.431911 | 1.3:-43469278 | MS.gene81748:CDS |
| CCTGCAGAGCACCGGGCTCA+TGG | 0.434839 | 1.3:-43468798 | MS.gene81748:CDS |
| ATTGCCCACACGATTCTCAT+TGG | 0.437600 | 1.3:+43467641 | None:intergenic |
| ACCTTGGAGATTAGAGGATC+AGG | 0.444518 | 1.3:+43467899 | None:intergenic |
| GGTGTCATTTGGAACATCAT+TGG | 0.445336 | 1.3:-43467510 | MS.gene81748:CDS |
| CCTATTGAAAACGTAGCAAC+TGG | 0.449891 | 1.3:+43466852 | None:intergenic |
| GGATGGTAGTTTCTGTCTAA+GGG | 0.452303 | 1.3:+43469220 | None:intergenic |
| GTTAACAACCAATTCAACAT+TGG | 0.453599 | 1.3:-43469181 | MS.gene81748:CDS |
| GTATGGTGTCGATCCTCATA+TGG | 0.454773 | 1.3:+43466829 | None:intergenic |
| TATCTTCTGTGAGGTGAACT+AGG | 0.462726 | 1.3:+43467966 | None:intergenic |
| GCATGCTCCTGCAGAGCACC+GGG | 0.482296 | 1.3:-43468805 | MS.gene81748:CDS |
| CCTTGGCACGTTTGATGTAG+AGG | 0.490692 | 1.3:-43467601 | MS.gene81748:CDS |
| CAAATGACACCTTCTTTGCA+TGG | 0.493029 | 1.3:+43467522 | None:intergenic |
| CATAGATATTATAGATATGT+TGG | 0.494664 | 1.3:-43467561 | MS.gene81748:CDS |
| CGTTTGCAGCATGCTCAAAT+GGG | 0.497742 | 1.3:-43469303 | MS.gene81748:CDS |
| ATGCTGCAAACGATGGACTC+AGG | 0.504036 | 1.3:+43469314 | None:intergenic |
| TCATTCATTACCAGTTCCAC+TGG | 0.518412 | 1.3:+43469268 | None:intergenic |
| ACTACCCCTCCATGCAAAGA+AGG | 0.533789 | 1.3:-43467531 | MS.gene81748:CDS |
| CCTCTACATCAAACGTGCCA+AGG | 0.536082 | 1.3:+43467601 | None:intergenic |
| CAAGTGTAGCATTTGTAGGA+TGG | 0.539412 | 1.3:+43469203 | None:intergenic |
| TCAACGCTGACAAGTTTGTA+TGG | 0.540945 | 1.3:+43466812 | None:intergenic |
| CTTACAAACGACCATGAGCC+CGG | 0.541180 | 1.3:+43468787 | None:intergenic |
| ACCAAATGGTCCTGAGAAGT+GGG | 0.541655 | 1.3:-43469341 | MS.gene81748:CDS |
| GACCAAATGGTCCTGAGAAG+TGG | 0.543240 | 1.3:-43469342 | MS.gene81748:CDS |
| TGACACCTTCTTTGCATGGA+GGG | 0.546979 | 1.3:+43467526 | None:intergenic |
| GAAAACGTAGCAACTGGAGT+TGG | 0.552025 | 1.3:+43466858 | None:intergenic |
| AAAGATGCCAAAATTGCCCT+TGG | 0.561911 | 1.3:-43467618 | MS.gene81748:CDS |
| TTCCAAATACAGACATGAAG+CGG | 0.562427 | 1.3:-43467996 | MS.gene81748:intron |
| TGCTGCAAACGATGGACTCA+GGG | 0.573943 | 1.3:+43469315 | None:intergenic |
| TTTGAGCATGCTGCAAACGA+TGG | 0.579578 | 1.3:+43469307 | None:intergenic |
| CGTAGCAACTGGAGTTGGCA+AGG | 0.582306 | 1.3:+43466863 | None:intergenic |
| GACACCTTCTTTGCATGGAG+GGG | 0.587126 | 1.3:+43467527 | None:intergenic |
| CTCTACATCAAACGTGCCAA+GGG | 0.596044 | 1.3:+43467602 | None:intergenic |
| TCCTGATCCTCTAATCTCCA+AGG | 0.601948 | 1.3:-43467900 | MS.gene81748:intron |
| TGTTATTGTTATCTTCTGTG+AGG | 0.604430 | 1.3:+43467957 | None:intergenic |
| CAGGATCACCCAAATTGTAG+AGG | 0.616295 | 1.3:+43467918 | None:intergenic |
| CATTTGGAACATCATTGGCA+AGG | 0.625922 | 1.3:-43467505 | MS.gene81748:intron |
| AGGATCACCCAAATTGTAGA+GGG | 0.637120 | 1.3:+43467919 | None:intergenic |
| TAACAACCAATTCAACATTG+GGG | 0.644450 | 1.3:-43469179 | MS.gene81748:intron |
| ATGACACCTTCTTTGCATGG+AGG | 0.651112 | 1.3:+43467525 | None:intergenic |
| GCTAGCCAATGAGAATCGTG+TGG | 0.657074 | 1.3:-43467646 | MS.gene81748:CDS |
| TGGGAAAGCACAAAGTCCAG+TGG | 0.663928 | 1.3:-43469284 | MS.gene81748:CDS |
| CTAGCCAATGAGAATCGTGT+GGG | 0.675900 | 1.3:-43467645 | MS.gene81748:CDS |
| CTTCTGTGAGGTGAACTAGG+TGG | 0.676418 | 1.3:+43467969 | None:intergenic |
| CCAAATGGTCCTGAGAAGTG+GGG | 0.710021 | 1.3:-43469340 | MS.gene81748:CDS |
| ATGTGGCTGATGCATGATCG+AGG | 0.723837 | 1.3:+43466910 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATCTAATTTAATATATAT+TGG | - | chr1.3:43468254-43468273 | MS.gene81748:intron | 10.0% |
| !! | TAAATGTAGAATATATTATT+TGG | - | chr1.3:43468656-43468675 | MS.gene81748:intron | 10.0% |
| !! | TTCAAATTATTATTATTAGT+CGG | - | chr1.3:43467367-43467386 | MS.gene81748:intron | 10.0% |
| !!! | GAATTTTTAAAAAAAAGATA+TGG | - | chr1.3:43468008-43468027 | MS.gene81748:intron | 10.0% |
| !! | AAAAATTTATAAGCATCATT+TGG | + | chr1.3:43467923-43467942 | None:intergenic | 15.0% |
| !! | AGTTATATAAATAGTTTGAA+AGG | + | chr1.3:43468093-43468112 | None:intergenic | 15.0% |
| !! | ATTTAATATATATTGGTACA+AGG | - | chr1.3:43468261-43468280 | MS.gene81748:intron | 15.0% |
| !!! | AATTCTATAATGTTTTTTAG+TGG | + | chr1.3:43467693-43467712 | None:intergenic | 15.0% |
| !! | AAACAAAGTACACAATTATA+AGG | - | chr1.3:43467426-43467445 | MS.gene81748:intron | 20.0% |
| !! | AAGTAAGCAATATTTCAAAA+TGG | + | chr1.3:43469392-43469411 | None:intergenic | 20.0% |
| !! | ATGTAGAGGAAATAAATAAA+AGG | - | chr1.3:43468797-43468816 | MS.gene81748:CDS | 20.0% |
| !! | CAACATATCTATAATATCTA+TGG | + | chr1.3:43468825-43468844 | None:intergenic | 20.0% |
| !! | CATAGATATTATAGATATGT+TGG | - | chr1.3:43468823-43468842 | MS.gene81748:CDS | 20.0% |
| !! | TAATTCAACAGAATGTTTAA+AGG | - | chr1.3:43468031-43468050 | MS.gene81748:intron | 20.0% |
| !! | TTTATTCCTTTACAAAAATC+TGG | + | chr1.3:43468198-43468217 | None:intergenic | 20.0% |
| !!! | AAAATATAGGTACATTTTGA+AGG | - | chr1.3:43467499-43467518 | MS.gene81748:intron | 20.0% |
| !!! | AACTAACATTGTAATTTGTA+AGG | + | chr1.3:43468348-43468367 | None:intergenic | 20.0% |
| !!! | ACTAACATTGTAATTTGTAA+GGG | + | chr1.3:43468347-43468366 | None:intergenic | 20.0% |
| !!! | AGTTTTTTTTATGCTAGATT+CGG | - | chr1.3:43467001-43467020 | MS.gene81748:intron | 20.0% |
| !!! | CTTAAAAAGTGTAAAAATTG+TGG | - | chr1.3:43467256-43467275 | MS.gene81748:intron | 20.0% |
| !!! | GCTAAATAGATTTTTATTAG+AGG | + | chr1.3:43468325-43468344 | None:intergenic | 20.0% |
| !!! | TCGGTTAATTTTAGTTATAT+TGG | - | chr1.3:43467020-43467039 | MS.gene81748:intron | 20.0% |
| !!! | TGATAATATTTTTGTTACTC+TGG | + | chr1.3:43468925-43468944 | None:intergenic | 20.0% |
| ! | AACGTTCATATTTGATATCA+CGG | - | chr1.3:43468534-43468553 | MS.gene81748:intron | 25.0% |
| ! | AACTATAATTTAAGTCAGAG+AGG | + | chr1.3:43467769-43467788 | None:intergenic | 25.0% |
| ! | AAGTACACAATTATAAGGTA+AGG | - | chr1.3:43467431-43467450 | MS.gene81748:intron | 25.0% |
| ! | AATTCTTCTTATTGCAACTT+TGG | - | chr1.3:43466835-43466854 | MS.gene81748:CDS | 25.0% |
| ! | ACTATAATTTAAGTCAGAGA+GGG | + | chr1.3:43467768-43467787 | None:intergenic | 25.0% |
| ! | AGAGAAAAAATAGTTTCTTC+TGG | + | chr1.3:43469167-43469186 | None:intergenic | 25.0% |
| ! | ATATATATTGGTACAAGGAA+TGG | - | chr1.3:43468266-43468285 | MS.gene81748:intron | 25.0% |
| ! | ATTCATTGAAACAACTTCAT+TGG | - | chr1.3:43467557-43467576 | MS.gene81748:CDS | 25.0% |
| ! | ATTGCTTACTTTAACATTTG+TGG | - | chr1.3:43469401-43469420 | MS.gene81748:intron | 25.0% |
| ! | CAATACATTCACAAAATCAA+GGG | - | chr1.3:43467654-43467673 | MS.gene81748:CDS | 25.0% |
| ! | GAGAAAAAATAGTTTCTTCT+GGG | + | chr1.3:43469166-43469185 | None:intergenic | 25.0% |
| ! | GTGGGAGATATTAATATAAA+TGG | - | chr1.3:43467526-43467545 | MS.gene81748:CDS | 25.0% |
| ! | TAGATGTAGAATATACGATA+TGG | + | chr1.3:43468241-43468260 | None:intergenic | 25.0% |
| ! | TATATATTGGTACAAGGAAT+GGG | - | chr1.3:43468267-43468286 | MS.gene81748:intron | 25.0% |
| ! | TATCACTCTCTCTTATAAAT+AGG | - | chr1.3:43469107-43469126 | MS.gene81748:intron | 25.0% |
| ! | TTAACAACCAATTCAACATT+GGG | - | chr1.3:43467204-43467223 | MS.gene81748:intron | 25.0% |
| ! | TTTAGTTATATTGGACCAAA+TGG | - | chr1.3:43467029-43467048 | MS.gene81748:intron | 25.0% |
| !! | ATCAACTGCATCTATTATTT+TGG | + | chr1.3:43466939-43466958 | None:intergenic | 25.0% |
| !! | ATTTTGAATACTCACAAATG+TGG | + | chr1.3:43469494-43469513 | None:intergenic | 25.0% |
| !! | CTTGATTTTGTGAATGTATT+GGG | + | chr1.3:43467655-43467674 | None:intergenic | 25.0% |
| !! | TTAGTTCCAGATTTTTGTAA+AGG | - | chr1.3:43468189-43468208 | MS.gene81748:intron | 25.0% |
| !!! | GGTTGAGTTTGTTAAAATAT+AGG | - | chr1.3:43467486-43467505 | MS.gene81748:intron | 25.0% |
| AAAAAATAGTTTCTTCTGGG+AGG | + | chr1.3:43469163-43469182 | None:intergenic | 30.0% | |
| AAAATAAGAGACGAGAAAAG+AGG | - | chr1.3:43468952-43468971 | MS.gene81748:intron | 30.0% | |
| AAGTCTATGACAATAGCTTT+CGG | + | chr1.3:43469362-43469381 | None:intergenic | 30.0% | |
| AATACAAACTAACACAACCT+AGG | - | chr1.3:43469132-43469151 | MS.gene81748:intron | 30.0% | |
| AATTGTGATGTCAACTGATA+TGG | - | chr1.3:43467465-43467484 | MS.gene81748:intron | 30.0% | |
| ATTATAAGGTAAGGTTGTTG+AGG | - | chr1.3:43467440-43467459 | MS.gene81748:intron | 30.0% | |
| ATTGAAATCAGTCTTCAAGT+GGG | + | chr1.3:43469443-43469462 | None:intergenic | 30.0% | |
| ATTTGTTTATGCAGACATTG+TGG | + | chr1.3:43469336-43469355 | None:intergenic | 30.0% | |
| CAACAGAATGTTTAAAGGAT+AGG | - | chr1.3:43468036-43468055 | MS.gene81748:intron | 30.0% | |
| CCAATACATTCACAAAATCA+AGG | - | chr1.3:43467653-43467672 | MS.gene81748:CDS | 30.0% | |
| CGGTAGTATATAGTTATGAT+GGG | + | chr1.3:43467286-43467305 | None:intergenic | 30.0% | |
| CTAGAATAAATCAGAATGCA+TGG | + | chr1.3:43468296-43468315 | None:intergenic | 30.0% | |
| CTTACTTTAACATTTGTGGT+GGG | - | chr1.3:43469405-43469424 | MS.gene81748:intron | 30.0% | |
| GGTAGTATATAGTTATGATG+GGG | + | chr1.3:43467285-43467304 | None:intergenic | 30.0% | |
| GTATAGCTACTAATTACATG+TGG | - | chr1.3:43468682-43468701 | MS.gene81748:intron | 30.0% | |
| GTTAACAACCAATTCAACAT+TGG | - | chr1.3:43467203-43467222 | MS.gene81748:intron | 30.0% | |
| TAACAACCAATTCAACATTG+GGG | - | chr1.3:43467205-43467224 | MS.gene81748:intron | 30.0% | |
| TCCATTACCACTATAAATAG+AGG | + | chr1.3:43469278-43469297 | None:intergenic | 30.0% | |
| TCGGTAGTATATAGTTATGA+TGG | + | chr1.3:43467287-43467306 | None:intergenic | 30.0% | |
| TGACTTAAATAACTCTACCT+TGG | + | chr1.3:43468504-43468523 | None:intergenic | 30.0% | |
| TGAGTTTCACAATAATGAAC+AGG | + | chr1.3:43467824-43467843 | None:intergenic | 30.0% | |
| TGTTATTGTTATCTTCTGTG+AGG | + | chr1.3:43468430-43468449 | None:intergenic | 30.0% | |
| TTAACAAGTGTAGCATTTGT+AGG | + | chr1.3:43467188-43467207 | None:intergenic | 30.0% | |
| TTACTTTAACATTTGTGGTG+GGG | - | chr1.3:43469406-43469425 | MS.gene81748:intron | 30.0% | |
| ! | ACATATTCGATTTGAAGTGT+CGG | + | chr1.3:43467306-43467325 | None:intergenic | 30.0% |
| ! | CAAGGTACTAAGTTTATGTT+AGG | - | chr1.3:43468897-43468916 | MS.gene81748:intron | 30.0% |
| ! | CCTTGATTTTGTGAATGTAT+TGG | + | chr1.3:43467656-43467675 | None:intergenic | 30.0% |
| ! | TAATGGACCAAAAGAAAACA+AGG | - | chr1.3:43469291-43469310 | MS.gene81748:CDS | 30.0% |
| ! | TGAACACACAATATTTTACG+TGG | - | chr1.3:43468978-43468997 | MS.gene81748:intron | 30.0% |
| !! | GTACATTTTGAAGGTAAAGT+GGG | - | chr1.3:43467508-43467527 | MS.gene81748:CDS | 30.0% |
| !! | GTGTTGTTACTGATGATTTT+GGG | - | chr1.3:43469209-43469228 | MS.gene81748:CDS | 30.0% |
| !! | TGTGTTGTTACTGATGATTT+TGG | - | chr1.3:43469208-43469227 | MS.gene81748:CDS | 30.0% |
| !!! | AATGTTTTTTAGTGGCCATA+AGG | + | chr1.3:43467685-43467704 | None:intergenic | 30.0% |
| AGTAGAGAACTTTCACTATG+TGG | - | chr1.3:43469041-43469060 | MS.gene81748:intron | 35.0% | |
| ATTTACCACGAATCCAAACA+AGG | - | chr1.3:43468599-43468618 | MS.gene81748:intron | 35.0% | |
| CAAGAGTCAAGACTATAAAG+TGG | - | chr1.3:43468633-43468652 | MS.gene81748:intron | 35.0% | |
| CACTATGTGGAAGAAATTAC+AGG | - | chr1.3:43469054-43469073 | MS.gene81748:intron | 35.0% | |
| CAGAATGTTTAAAGGATAGG+AGG | - | chr1.3:43468039-43468058 | MS.gene81748:intron | 35.0% | |
| GATTGAAATCAGTCTTCAAG+TGG | + | chr1.3:43469444-43469463 | None:intergenic | 35.0% | |
| GCCTCTATTTATAGTGGTAA+TGG | - | chr1.3:43469274-43469293 | MS.gene81748:CDS | 35.0% | |
| GCTTACTTTAACATTTGTGG+TGG | - | chr1.3:43469404-43469423 | MS.gene81748:intron | 35.0% | |
| TACATACCCCAATGTTGAAT+TGG | + | chr1.3:43467214-43467233 | None:intergenic | 35.0% | |
| TACATTCACAAAATCAAGGG+CGG | - | chr1.3:43467657-43467676 | MS.gene81748:CDS | 35.0% | |
| TACTTTAACATTTGTGGTGG+GGG | - | chr1.3:43469407-43469426 | MS.gene81748:intron | 35.0% | |
| TGAGTCATGTAATCCTTGTT+TGG | + | chr1.3:43468615-43468634 | None:intergenic | 35.0% | |
| TGTCTAAGGGTTTCAATTCT+TGG | + | chr1.3:43467154-43467173 | None:intergenic | 35.0% | |
| TTCCAAATACAGACATGAAG+CGG | - | chr1.3:43468388-43468407 | MS.gene81748:intron | 35.0% | |
| ! | ATTATTATTAGTCGGTGCCT+AGG | - | chr1.3:43467375-43467394 | MS.gene81748:intron | 35.0% |
| ! | TTTCTCCCCTTATTTGTTGA+GGG | + | chr1.3:43469008-43469027 | None:intergenic | 35.0% |
| !! | AGCTTGATAATGACAACTTG+AGG | - | chr1.3:43468121-43468140 | MS.gene81748:intron | 35.0% |
| !! | GGTACATTTTGAAGGTAAAG+TGG | - | chr1.3:43467507-43467526 | MS.gene81748:CDS | 35.0% |
| !! | TTTTCTCCCCTTATTTGTTG+AGG | + | chr1.3:43469009-43469028 | None:intergenic | 35.0% |
| AAAGATGCCAAAATTGCCCT+TGG | - | chr1.3:43468766-43468785 | MS.gene81748:intron | 40.0% | |
| AAATAAGGGGAGAAAACCAC+GGG | - | chr1.3:43469013-43469032 | MS.gene81748:intron | 40.0% | |
| AACTCTACCTTGGAGATTAG+AGG | + | chr1.3:43468494-43468513 | None:intergenic | 40.0% | |
| AAGAAGAAGAGAGAGGGAAA+AGG | + | chr1.3:43467625-43467644 | None:intergenic | 40.0% | |
| ACCACTATAAATAGAGGCCT+TGG | + | chr1.3:43469272-43469291 | None:intergenic | 40.0% | |
| AGAAGAAGAGAGAGGGAAAA+GGG | + | chr1.3:43467624-43467643 | None:intergenic | 40.0% | |
| AGAGAAGAAGAAGAAGAGAG+AGG | + | chr1.3:43467632-43467651 | None:intergenic | 40.0% | |
| AGGACCTCTCTCTAAATACA+AGG | - | chr1.3:43469074-43469093 | MS.gene81748:intron | 40.0% | |
| AGGATCACCCAAATTGTAGA+GGG | + | chr1.3:43468468-43468487 | None:intergenic | 40.0% | |
| AGGATGGTAGTTTCTGTCTA+AGG | + | chr1.3:43467168-43467187 | None:intergenic | 40.0% | |
| ATTGCAGCCCTCTACAATTT+GGG | - | chr1.3:43468458-43468477 | MS.gene81748:intron | 40.0% | |
| CAAATAAGGGGAGAAAACCA+CGG | - | chr1.3:43469012-43469031 | MS.gene81748:intron | 40.0% | |
| CAAATGACACCTTCTTTGCA+TGG | + | chr1.3:43468865-43468884 | None:intergenic | 40.0% | |
| CAAGTGTAGCATTTGTAGGA+TGG | + | chr1.3:43467184-43467203 | None:intergenic | 40.0% | |
| CCTATTGAAAACGTAGCAAC+TGG | + | chr1.3:43469535-43469554 | None:intergenic | 40.0% | |
| CGGTAAATTTGTCGAAGTCA+TGG | - | chr1.3:43468554-43468573 | MS.gene81748:intron | 40.0% | |
| CTCTCCTTGTATTTAGAGAG+AGG | + | chr1.3:43469081-43469100 | None:intergenic | 40.0% | |
| GAAACCCCTCAACAAATAAG+GGG | - | chr1.3:43469000-43469019 | MS.gene81748:intron | 40.0% | |
| GACCAAAAGAAAACAAGGCA+TGG | - | chr1.3:43469296-43469315 | MS.gene81748:CDS | 40.0% | |
| GAGAAGAAGAAGAAGAGAGA+GGG | + | chr1.3:43467631-43467650 | None:intergenic | 40.0% | |
| GGAAACCCCTCAACAAATAA+GGG | - | chr1.3:43468999-43469018 | MS.gene81748:intron | 40.0% | |
| GGATGGTAGTTTCTGTCTAA+GGG | + | chr1.3:43467167-43467186 | None:intergenic | 40.0% | |
| TATCTTCTGTGAGGTGAACT+AGG | + | chr1.3:43468421-43468440 | None:intergenic | 40.0% | |
| TATTGCAGCCCTCTACAATT+TGG | - | chr1.3:43468457-43468476 | MS.gene81748:intron | 40.0% | |
| TCAACGCTGACAAGTTTGTA+TGG | + | chr1.3:43469575-43469594 | None:intergenic | 40.0% | |
| TCATTCATTACCAGTTCCAC+TGG | + | chr1.3:43467119-43467138 | None:intergenic | 40.0% | |
| TGGAAACCCCTCAACAAATA+AGG | - | chr1.3:43468998-43469017 | MS.gene81748:intron | 40.0% | |
| ! | CATTTGGAACATCATTGGCA+AGG | - | chr1.3:43468879-43468898 | MS.gene81748:CDS | 40.0% |
| ! | CCAGTTGCTACGTTTTCAAT+AGG | - | chr1.3:43469532-43469551 | MS.gene81748:CDS | 40.0% |
| ! | CGTTTTCAATAGGCCATATG+AGG | - | chr1.3:43469542-43469561 | MS.gene81748:CDS | 40.0% |
| ! | GTAATCCTTGTTTGGATTCG+TGG | + | chr1.3:43468607-43468626 | None:intergenic | 40.0% |
| ! | TTCTCCCCTTATTTGTTGAG+GGG | + | chr1.3:43469007-43469026 | None:intergenic | 40.0% |
| !! | CATGCAAAGAAGGTGTCATT+TGG | - | chr1.3:43468863-43468882 | MS.gene81748:CDS | 40.0% |
| !! | GGTGTCATTTGGAACATCAT+TGG | - | chr1.3:43468874-43468893 | MS.gene81748:CDS | 40.0% |
| !!! | TGCCATGCCTTGTTTTCTTT+TGG | + | chr1.3:43469301-43469320 | None:intergenic | 40.0% |
| AATAAGGGGAGAAAACCACG+GGG | - | chr1.3:43469014-43469033 | MS.gene81748:intron | 45.0% | |
| ACCAAATGGTCCTGAGAAGT+GGG | - | chr1.3:43467043-43467062 | MS.gene81748:intron | 45.0% | |
| ACCTTGGAGATTAGAGGATC+AGG | + | chr1.3:43468488-43468507 | None:intergenic | 45.0% | |
| AGAGAGGGTTTCATCGATGT+TGG | + | chr1.3:43467753-43467772 | None:intergenic | 45.0% | |
| ATGACACCTTCTTTGCATGG+AGG | + | chr1.3:43468862-43468881 | None:intergenic | 45.0% | |
| ATTGCCCACACGATTCTCAT+TGG | + | chr1.3:43468746-43468765 | None:intergenic | 45.0% | |
| CAGGATCACCCAAATTGTAG+AGG | + | chr1.3:43468469-43468488 | None:intergenic | 45.0% | |
| CGTTTGCAGCATGCTCAAAT+GGG | - | chr1.3:43467081-43467100 | MS.gene81748:intron | 45.0% | |
| CTAGCCAATGAGAATCGTGT+GGG | - | chr1.3:43468739-43468758 | MS.gene81748:intron | 45.0% | |
| CTCCGCTTCATGTCTGTATT+TGG | + | chr1.3:43468393-43468412 | None:intergenic | 45.0% | |
| CTCTACATCAAACGTGCCAA+GGG | + | chr1.3:43468785-43468804 | None:intergenic | 45.0% | |
| GAAAACGTAGCAACTGGAGT+TGG | + | chr1.3:43469529-43469548 | None:intergenic | 45.0% | |
| GCCAAGGCCTCTATTTATAG+TGG | - | chr1.3:43469268-43469287 | MS.gene81748:CDS | 45.0% | |
| GTCTTCAAGTGGGAGATTGT+TGG | + | chr1.3:43469433-43469452 | None:intergenic | 45.0% | |
| TCCTGATCCTCTAATCTCCA+AGG | - | chr1.3:43468484-43468503 | MS.gene81748:intron | 45.0% | |
| TCGTTTGCAGCATGCTCAAA+TGG | - | chr1.3:43467080-43467099 | MS.gene81748:intron | 45.0% | |
| TGACACCTTCTTTGCATGGA+GGG | + | chr1.3:43468861-43468880 | None:intergenic | 45.0% | |
| TTTGAGCATGCTGCAAACGA+TGG | + | chr1.3:43467080-43467099 | None:intergenic | 45.0% | |
| ! | AAACGTGCCAAGGGCAATTT+TGG | + | chr1.3:43468776-43468795 | None:intergenic | 45.0% |
| ! | ATTAGTCGGTGCCTAGGTAT+CGG | - | chr1.3:43467381-43467400 | MS.gene81748:intron | 45.0% |
| ! | TGCATTTTCCTTCACTGCCA+AGG | - | chr1.3:43469252-43469271 | MS.gene81748:CDS | 45.0% |
| !! | GTATGGTGTCGATCCTCATA+TGG | + | chr1.3:43469558-43469577 | None:intergenic | 45.0% |
| AAATCAAGGGCGGTGCCTTA+TGG | - | chr1.3:43467667-43467686 | MS.gene81748:CDS | 50.0% | |
| AATAGAGGCCTTGGCAGTGA+AGG | + | chr1.3:43469263-43469282 | None:intergenic | 50.0% | |
| ACTACCCCTCCATGCAAAGA+AGG | - | chr1.3:43468853-43468872 | MS.gene81748:CDS | 50.0% | |
| AGCACAAAGTCCAGTGGAAC+TGG | - | chr1.3:43467106-43467125 | MS.gene81748:intron | 50.0% | |
| ATGTGGCTGATGCATGATCG+AGG | + | chr1.3:43469477-43469496 | None:intergenic | 50.0% | |
| CCAAATGGTCCTGAGAAGTG+GGG | - | chr1.3:43467044-43467063 | MS.gene81748:intron | 50.0% | |
| CCTCTACATCAAACGTGCCA+AGG | + | chr1.3:43468786-43468805 | None:intergenic | 50.0% | |
| CCTTGGCACGTTTGATGTAG+AGG | - | chr1.3:43468783-43468802 | MS.gene81748:intron | 50.0% | |
| CTTACAAACGACCATGAGCC+CGG | + | chr1.3:43467600-43467619 | None:intergenic | 50.0% | |
| CTTCTGTGAGGTGAACTAGG+TGG | + | chr1.3:43468418-43468437 | None:intergenic | 50.0% | |
| GACACCTTCTTTGCATGGAG+GGG | + | chr1.3:43468860-43468879 | None:intergenic | 50.0% | |
| GACCAAATGGTCCTGAGAAG+TGG | - | chr1.3:43467042-43467061 | MS.gene81748:intron | 50.0% | |
| GCTAGCCAATGAGAATCGTG+TGG | - | chr1.3:43468738-43468757 | MS.gene81748:intron | 50.0% | |
| TAGACCCAACACCGATACCT+AGG | + | chr1.3:43467395-43467414 | None:intergenic | 50.0% | |
| ! | ATGCTGCAAACGATGGACTC+AGG | + | chr1.3:43467073-43467092 | None:intergenic | 50.0% |
| ! | TCTTCTGGGAGGTTTCTCCT+AGG | + | chr1.3:43469152-43469171 | None:intergenic | 50.0% |
| ! | TGCTGCAAACGATGGACTCA+GGG | + | chr1.3:43467072-43467091 | None:intergenic | 50.0% |
| ! | TGGGAAAGCACAAAGTCCAG+TGG | - | chr1.3:43467100-43467119 | MS.gene81748:intron | 50.0% |
| AGTTCTCTACTCTTGCCCCG+TGG | + | chr1.3:43469032-43469051 | None:intergenic | 55.0% | |
| CCCCACTTCTCAGGACCATT+TGG | + | chr1.3:43467047-43467066 | None:intergenic | 55.0% | |
| CGTAGCAACTGGAGTTGGCA+AGG | + | chr1.3:43469524-43469543 | None:intergenic | 55.0% | |
| !! | GGTGCCTAGGTATCGGTGTT+GGG | - | chr1.3:43467388-43467407 | MS.gene81748:intron | 55.0% |
| CTCAGGGTTCCCCACTTCTC+AGG | + | chr1.3:43467056-43467075 | None:intergenic | 60.0% | |
| !! | CGGTGCCTAGGTATCGGTGT+TGG | - | chr1.3:43467387-43467406 | MS.gene81748:intron | 60.0% |
| GGCATGCTCCTGCAGAGCAC+CGG | - | chr1.3:43467578-43467597 | MS.gene81748:CDS | 65.0% | |
| ! | GCATGCTCCTGCAGAGCACC+GGG | - | chr1.3:43467579-43467598 | MS.gene81748:CDS | 65.0% |
| CCATGAGCCCGGTGCTCTGC+AGG | + | chr1.3:43467589-43467608 | None:intergenic | 70.0% | |
| !! | CCTGCAGAGCACCGGGCTCA+TGG | - | chr1.3:43467586-43467605 | MS.gene81748:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 43466812 | 43469594 | 43466812 | ID=MS.gene81748 |
| chr1.3 | mRNA | 43466812 | 43469594 | 43466812 | ID=MS.gene81748.t1;Parent=MS.gene81748 |
| chr1.3 | exon | 43469525 | 43469594 | 43469525 | ID=MS.gene81748.t1.exon1;Parent=MS.gene81748.t1 |
| chr1.3 | CDS | 43469525 | 43469594 | 43469525 | ID=cds.MS.gene81748.t1;Parent=MS.gene81748.t1 |
| chr1.3 | exon | 43469180 | 43469388 | 43469180 | ID=MS.gene81748.t1.exon2;Parent=MS.gene81748.t1 |
| chr1.3 | CDS | 43469180 | 43469388 | 43469180 | ID=cds.MS.gene81748.t1;Parent=MS.gene81748.t1 |
| chr1.3 | exon | 43468792 | 43468898 | 43468792 | ID=MS.gene81748.t1.exon3;Parent=MS.gene81748.t1 |
| chr1.3 | CDS | 43468792 | 43468898 | 43468792 | ID=cds.MS.gene81748.t1;Parent=MS.gene81748.t1 |
| chr1.3 | exon | 43467901 | 43468006 | 43467901 | ID=MS.gene81748.t1.exon4;Parent=MS.gene81748.t1 |
| chr1.3 | CDS | 43467901 | 43468006 | 43467901 | ID=cds.MS.gene81748.t1;Parent=MS.gene81748.t1 |
| chr1.3 | exon | 43467506 | 43467688 | 43467506 | ID=MS.gene81748.t1.exon5;Parent=MS.gene81748.t1 |
| chr1.3 | CDS | 43467506 | 43467688 | 43467506 | ID=cds.MS.gene81748.t1;Parent=MS.gene81748.t1 |
| chr1.3 | exon | 43466812 | 43466955 | 43466812 | ID=MS.gene81748.t1.exon6;Parent=MS.gene81748.t1 |
| chr1.3 | CDS | 43466812 | 43466955 | 43466812 | ID=cds.MS.gene81748.t1;Parent=MS.gene81748.t1 |
| Gene Sequence |
| Protein sequence |
