Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92189.t1 | RHN74509.1 | 98.2 | 328 | 6 | 0 | 1 | 328 | 1 | 328 | 4.70E-152 | 547.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92189.t1 | Q84X53 | 34.1 | 123 | 78 | 2 | 65 | 184 | 27 | 149 | 3.9e-14 | 80.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92189.t1 | A0A396J8D7 | 98.2 | 328 | 6 | 0 | 1 | 328 | 1 | 328 | 3.4e-152 | 547.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene92189.t1 | TR | mTERF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene92189 | 0.856325 | 3.47E-62 | -1.69E-46 |
| MS.gene049173 | MS.gene92189 | 0.809101 | 2.23E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene92189 | 0.821557 | 3.79E-53 | -1.69E-46 |
| MS.gene049222 | MS.gene92189 | 0.837408 | 5.29E-57 | -1.69E-46 |
| MS.gene049232 | MS.gene92189 | 0.821935 | 3.10E-53 | -1.69E-46 |
| MS.gene049281 | MS.gene92189 | -0.802213 | 6.24E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene92189 | 0.886071 | 4.70E-72 | -1.69E-46 |
| MS.gene049313 | MS.gene92189 | -0.81044 | 1.15E-50 | -1.69E-46 |
| MS.gene049320 | MS.gene92189 | 0.89471 | 1.91E-75 | -1.69E-46 |
| MS.gene049600 | MS.gene92189 | 0.819895 | 9.13E-53 | -1.69E-46 |
| MS.gene049627 | MS.gene92189 | 0.837151 | 6.16E-57 | -1.69E-46 |
| MS.gene049633 | MS.gene92189 | 0.840923 | 6.49E-58 | -1.69E-46 |
| MS.gene05010 | MS.gene92189 | 0.844227 | 8.61E-59 | -1.69E-46 |
| MS.gene050163 | MS.gene92189 | 0.899661 | 1.59E-77 | -1.69E-46 |
| MS.gene050165 | MS.gene92189 | 0.896998 | 2.15E-76 | -1.69E-46 |
| MS.gene050323 | MS.gene92189 | 0.818449 | 1.95E-52 | -1.69E-46 |
| MS.gene050333 | MS.gene92189 | 0.863313 | 2.72E-64 | -1.69E-46 |
| MS.gene050496 | MS.gene92189 | 0.816973 | 4.20E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene92189 | 0.89762 | 1.18E-76 | -1.69E-46 |
| MS.gene050518 | MS.gene92189 | 0.887479 | 1.38E-72 | -1.69E-46 |
| MS.gene050577 | MS.gene92189 | 0.884121 | 2.51E-71 | -1.69E-46 |
| MS.gene050612 | MS.gene92189 | 0.907995 | 2.77E-81 | -1.69E-46 |
| MS.gene050675 | MS.gene92189 | 0.864281 | 1.36E-64 | -1.69E-46 |
| MS.gene050699 | MS.gene92189 | 0.891048 | 5.67E-74 | -1.69E-46 |
| MS.gene050772 | MS.gene92189 | 0.832852 | 7.46E-56 | -1.69E-46 |
| MS.gene050876 | MS.gene92189 | 0.848024 | 7.98E-60 | -1.69E-46 |
| MS.gene05087 | MS.gene92189 | 0.821351 | 4.23E-53 | -1.69E-46 |
| MS.gene050904 | MS.gene92189 | 0.800732 | 1.26E-48 | -1.69E-46 |
| MS.gene050950 | MS.gene92189 | 0.807838 | 4.16E-50 | -1.69E-46 |
| MS.gene050986 | MS.gene92189 | 0.89742 | 1.43E-76 | -1.69E-46 |
| MS.gene05100 | MS.gene92189 | 0.847146 | 1.39E-59 | -1.69E-46 |
| MS.gene051127 | MS.gene92189 | -0.812564 | 3.98E-51 | -1.69E-46 |
| MS.gene051317 | MS.gene92189 | 0.851715 | 7.41E-61 | -1.69E-46 |
| MS.gene051434 | MS.gene92189 | 0.801509 | 8.71E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene92189 | 0.854329 | 1.32E-61 | -1.69E-46 |
| MS.gene051810 | MS.gene92189 | 0.870552 | 1.34E-66 | -1.69E-46 |
| MS.gene051949 | MS.gene92189 | 0.821033 | 5.00E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene92189 | 0.826929 | 2.07E-54 | -1.69E-46 |
| MS.gene052271 | MS.gene92189 | 0.831556 | 1.56E-55 | -1.69E-46 |
| MS.gene052482 | MS.gene92189 | 0.821129 | 4.76E-53 | -1.69E-46 |
| MS.gene052486 | MS.gene92189 | 0.840346 | 9.19E-58 | -1.69E-46 |
| MS.gene052615 | MS.gene92189 | 0.808064 | 3.72E-50 | -1.69E-46 |
| MS.gene052822 | MS.gene92189 | 0.803699 | 3.08E-49 | -1.69E-46 |
| MS.gene052916 | MS.gene92189 | 0.856582 | 2.92E-62 | -1.69E-46 |
| MS.gene052966 | MS.gene92189 | 0.80797 | 3.90E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene92189 | 0.834988 | 2.18E-56 | -1.69E-46 |
| MS.gene053213 | MS.gene92189 | 0.870134 | 1.84E-66 | -1.69E-46 |
| MS.gene053286 | MS.gene92189 | 0.877381 | 6.58E-69 | -1.69E-46 |
| MS.gene053574 | MS.gene92189 | 0.82092 | 5.32E-53 | -1.69E-46 |
| MS.gene054374 | MS.gene92189 | 0.809527 | 1.81E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene92189 | 0.810171 | 1.32E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene92189 | 0.842595 | 2.35E-58 | -1.69E-46 |
| MS.gene054642 | MS.gene92189 | 0.877015 | 8.81E-69 | -1.69E-46 |
| MS.gene05470 | MS.gene92189 | 0.839249 | 1.77E-57 | -1.69E-46 |
| MS.gene054954 | MS.gene92189 | 0.891922 | 2.55E-74 | -1.69E-46 |
| MS.gene055206 | MS.gene92189 | 0.801232 | 9.92E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene92189 | 0.897046 | 2.06E-76 | -1.69E-46 |
| MS.gene055502 | MS.gene92189 | 0.855489 | 6.10E-62 | -1.69E-46 |
| MS.gene055577 | MS.gene92189 | 0.840858 | 6.75E-58 | -1.69E-46 |
| MS.gene055634 | MS.gene92189 | 0.807435 | 5.06E-50 | -1.69E-46 |
| MS.gene055647 | MS.gene92189 | 0.811923 | 5.49E-51 | -1.69E-46 |
| MS.gene055722 | MS.gene92189 | 0.816986 | 4.17E-52 | -1.69E-46 |
| MS.gene055748 | MS.gene92189 | 0.855621 | 5.58E-62 | -1.69E-46 |
| MS.gene055750 | MS.gene92189 | 0.838435 | 2.88E-57 | -1.69E-46 |
| MS.gene055751 | MS.gene92189 | 0.863759 | 1.98E-64 | -1.69E-46 |
| MS.gene055776 | MS.gene92189 | 0.868376 | 6.84E-66 | -1.69E-46 |
| MS.gene055849 | MS.gene92189 | 0.814425 | 1.55E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene92189 | 0.824417 | 8.17E-54 | -1.69E-46 |
| MS.gene056083 | MS.gene92189 | 0.815284 | 1.00E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene92189 | 0.86764 | 1.18E-65 | -1.69E-46 |
| MS.gene056409 | MS.gene92189 | 0.831036 | 2.10E-55 | -1.69E-46 |
| MS.gene056504 | MS.gene92189 | 0.863778 | 1.95E-64 | -1.69E-46 |
| MS.gene056510 | MS.gene92189 | 0.865661 | 5.02E-65 | -1.69E-46 |
| MS.gene056549 | MS.gene92189 | 0.820701 | 5.97E-53 | -1.69E-46 |
| MS.gene056610 | MS.gene92189 | 0.82742 | 1.58E-54 | -1.69E-46 |
| MS.gene056657 | MS.gene92189 | 0.886909 | 2.27E-72 | -1.69E-46 |
| MS.gene056692 | MS.gene92189 | 0.865917 | 4.17E-65 | -1.69E-46 |
| MS.gene056761 | MS.gene92189 | -0.80897 | 2.38E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene92189 | 0.805215 | 1.49E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene92189 | 0.814964 | 1.18E-51 | -1.69E-46 |
| MS.gene057831 | MS.gene92189 | 0.843535 | 1.32E-58 | -1.69E-46 |
| MS.gene057986 | MS.gene92189 | 0.853963 | 1.69E-61 | -1.69E-46 |
| MS.gene05837 | MS.gene92189 | 0.809632 | 1.72E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene92189 | 0.878071 | 3.78E-69 | -1.69E-46 |
| MS.gene058544 | MS.gene92189 | 0.851751 | 7.24E-61 | -1.69E-46 |
| MS.gene058719 | MS.gene92189 | 0.82093 | 5.29E-53 | -1.69E-46 |
| MS.gene058723 | MS.gene92189 | 0.820712 | 5.93E-53 | -1.69E-46 |
| MS.gene058773 | MS.gene92189 | 0.852686 | 3.92E-61 | -1.69E-46 |
| MS.gene058838 | MS.gene92189 | 0.800347 | 1.50E-48 | -1.69E-46 |
| MS.gene059022 | MS.gene92189 | 0.909951 | 3.22E-82 | -1.69E-46 |
| MS.gene059023 | MS.gene92189 | 0.834235 | 3.37E-56 | -1.69E-46 |
| MS.gene059677 | MS.gene92189 | 0.885197 | 1.00E-71 | -1.69E-46 |
| MS.gene059718 | MS.gene92189 | 0.855176 | 7.52E-62 | -1.69E-46 |
| MS.gene059756 | MS.gene92189 | 0.854417 | 1.25E-61 | -1.69E-46 |
| MS.gene059837 | MS.gene92189 | 0.825787 | 3.88E-54 | -1.69E-46 |
| MS.gene059865 | MS.gene92189 | 0.865667 | 5.00E-65 | -1.69E-46 |
| MS.gene06000 | MS.gene92189 | 0.802212 | 6.24E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene92189 | 0.874524 | 6.31E-68 | -1.69E-46 |
| MS.gene060728 | MS.gene92189 | 0.801465 | 8.89E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene92189 | 0.853823 | 1.85E-61 | -1.69E-46 |
| MS.gene060778 | MS.gene92189 | 0.802176 | 6.35E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene92189 | 0.885853 | 5.68E-72 | -1.69E-46 |
| MS.gene06092 | MS.gene92189 | 0.808595 | 2.87E-50 | -1.69E-46 |
| MS.gene060982 | MS.gene92189 | 0.868111 | 8.32E-66 | -1.69E-46 |
| MS.gene061150 | MS.gene92189 | 0.870608 | 1.28E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene067125 | MS.gene92189 | PPI |
| MS.gene92189 | MS.gene006937 | PPI |
| MS.gene92189 | MS.gene033812 | PPI |
| MS.gene92189 | MS.gene56084 | PPI |
| MS.gene92189 | MS.gene97055 | PPI |
| MS.gene92189 | MS.gene75815 | PPI |
| MS.gene92189 | MS.gene059518 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92189.t1 | MTR_2g067230 | 97.561 | 328 | 8 | 0 | 1 | 328 | 1 | 328 | 0.0 | 661 |
| MS.gene92189.t1 | MTR_0320s0040 | 85.246 | 122 | 18 | 0 | 36 | 157 | 15 | 136 | 9.59e-71 | 219 |
| MS.gene92189.t1 | MTR_2g049780 | 39.662 | 237 | 138 | 2 | 69 | 300 | 69 | 305 | 1.72e-57 | 188 |
| MS.gene92189.t1 | MTR_5g041630 | 36.508 | 252 | 151 | 3 | 60 | 304 | 48 | 297 | 5.34e-48 | 164 |
| MS.gene92189.t1 | MTR_7g081270 | 31.923 | 260 | 161 | 7 | 51 | 299 | 25 | 279 | 3.00e-33 | 124 |
| MS.gene92189.t1 | MTR_5g094610 | 26.639 | 244 | 161 | 6 | 70 | 296 | 227 | 469 | 1.94e-25 | 106 |
| MS.gene92189.t1 | MTR_4g070060 | 28.077 | 260 | 173 | 7 | 69 | 316 | 345 | 602 | 5.05e-23 | 100 |
| MS.gene92189.t1 | MTR_2g034600 | 29.464 | 224 | 146 | 5 | 87 | 303 | 268 | 486 | 1.59e-22 | 98.2 |
| MS.gene92189.t1 | MTR_2g034600 | 29.464 | 224 | 146 | 5 | 87 | 303 | 333 | 551 | 1.78e-22 | 98.2 |
| MS.gene92189.t1 | MTR_2g034600 | 29.464 | 224 | 146 | 5 | 87 | 303 | 329 | 547 | 1.85e-22 | 98.2 |
| MS.gene92189.t1 | MTR_6g003960 | 28.426 | 197 | 134 | 2 | 87 | 277 | 370 | 565 | 1.33e-21 | 95.9 |
| MS.gene92189.t1 | MTR_4g084630 | 26.966 | 178 | 121 | 2 | 129 | 300 | 145 | 319 | 1.01e-15 | 77.0 |
| MS.gene92189.t1 | MTR_5g068860 | 21.739 | 276 | 169 | 5 | 75 | 304 | 213 | 487 | 3.06e-15 | 76.6 |
| MS.gene92189.t1 | MTR_1g115415 | 23.373 | 338 | 166 | 12 | 75 | 326 | 145 | 475 | 7.33e-14 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92189.t1 | AT2G36000 | 55.985 | 259 | 110 | 3 | 70 | 324 | 74 | 332 | 1.48e-99 | 297 |
| MS.gene92189.t1 | AT2G36000 | 57.083 | 240 | 99 | 3 | 70 | 305 | 74 | 313 | 3.21e-94 | 283 |
| MS.gene92189.t1 | AT2G34620 | 40.000 | 240 | 139 | 2 | 69 | 303 | 55 | 294 | 5.05e-59 | 192 |
| MS.gene92189.t1 | AT2G03050 | 38.403 | 263 | 149 | 6 | 50 | 303 | 15 | 273 | 2.62e-53 | 177 |
| MS.gene92189.t1 | AT2G03050 | 38.403 | 263 | 149 | 6 | 50 | 303 | 14 | 272 | 3.03e-53 | 176 |
| MS.gene92189.t1 | AT3G18870 | 31.020 | 245 | 155 | 5 | 66 | 302 | 33 | 271 | 1.20e-34 | 127 |
| MS.gene92189.t1 | AT5G55580 | 25.926 | 243 | 164 | 6 | 70 | 296 | 114 | 356 | 1.49e-25 | 105 |
| MS.gene92189.t1 | AT5G55580 | 25.926 | 243 | 164 | 6 | 70 | 296 | 220 | 462 | 3.72e-25 | 105 |
| MS.gene92189.t1 | AT4G14605 | 26.033 | 242 | 170 | 5 | 66 | 300 | 229 | 468 | 2.02e-21 | 95.1 |
| MS.gene92189.t1 | AT4G14605 | 26.033 | 242 | 170 | 5 | 66 | 300 | 229 | 468 | 2.02e-21 | 95.1 |
| MS.gene92189.t1 | AT1G78930 | 27.619 | 210 | 144 | 3 | 75 | 277 | 344 | 552 | 6.58e-21 | 94.0 |
| MS.gene92189.t1 | AT2G21710 | 28.629 | 248 | 161 | 7 | 69 | 303 | 352 | 596 | 1.54e-19 | 89.7 |
| MS.gene92189.t1 | AT4G38160 | 25.106 | 235 | 163 | 6 | 55 | 277 | 65 | 298 | 1.35e-15 | 77.0 |
| MS.gene92189.t1 | AT4G38160 | 25.106 | 235 | 163 | 6 | 55 | 277 | 65 | 298 | 1.35e-15 | 77.0 |
| MS.gene92189.t1 | AT4G38160 | 25.106 | 235 | 163 | 6 | 55 | 277 | 65 | 298 | 1.48e-15 | 77.0 |
| MS.gene92189.t1 | AT4G38160 | 25.106 | 235 | 163 | 6 | 55 | 277 | 65 | 298 | 2.62e-15 | 76.3 |
| MS.gene92189.t1 | AT2G44020 | 23.134 | 268 | 159 | 8 | 89 | 311 | 203 | 468 | 7.34e-15 | 75.5 |
| MS.gene92189.t1 | AT4G02990 | 23.741 | 278 | 163 | 8 | 73 | 303 | 219 | 494 | 1.21e-12 | 68.9 |
| MS.gene92189.t1 | AT4G02990 | 23.741 | 278 | 163 | 8 | 73 | 303 | 219 | 494 | 1.21e-12 | 68.9 |
Find 83 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATAGTATTAAGAATAATT+TGG | 0.227622 | 2.4:-27319728 | MS.gene92189:CDS |
| TTTGCAAACCCTTTCATTCT+AGG | 0.246141 | 2.4:-27321923 | MS.gene92189:CDS |
| TCACTAGTCTTTAATAATAA+AGG | 0.282485 | 2.4:+27319559 | None:intergenic |
| CAAAGACGAGTGAAGGATTT+GGG | 0.291354 | 2.4:+27321942 | None:intergenic |
| ACCACAAAGTAATTGTATTT+AGG | 0.292252 | 2.4:+27319703 | None:intergenic |
| TGCAATTGAGTTTCGGCGTT+TGG | 0.299697 | 2.4:-27320082 | MS.gene92189:CDS |
| CAATTACTTTGTGGTGGAAA+TGG | 0.302908 | 2.4:-27319695 | MS.gene92189:CDS |
| ATCGAATACTTTGAAAATAT+CGG | 0.309283 | 2.4:-27319805 | MS.gene92189:CDS |
| ACATAAACGGTGTGTAGAAA+TGG | 0.346811 | 2.4:-27319599 | MS.gene92189:CDS |
| ATGTATTACAGGTTGTAAAA+TGG | 0.349290 | 2.4:-27320284 | MS.gene92189:intron |
| GCAAAGACGAGTGAAGGATT+TGG | 0.354919 | 2.4:+27321941 | None:intergenic |
| AATTACTTTGTGGTGGAAAT+GGG | 0.364045 | 2.4:-27319694 | MS.gene92189:CDS |
| TCTCATTTAGCTTAGAGAAT+AGG | 0.372077 | 2.4:-27319633 | MS.gene92189:CDS |
| CTACCTCCCAACACTGATAC+TGG | 0.373802 | 2.4:-27320243 | MS.gene92189:CDS |
| TTGGGAGGTAGAGTTTGATT+TGG | 0.389507 | 2.4:+27320255 | None:intergenic |
| ATTTCTCTGCAATTGAGTTT+CGG | 0.390370 | 2.4:-27320089 | MS.gene92189:CDS |
| CGACACTACATGATAGCAAA+TGG | 0.394976 | 2.4:+27319848 | None:intergenic |
| CCTCTTCTATGCCAATACTT+TGG | 0.410530 | 2.4:+27319884 | None:intergenic |
| CCTTGAAAACATCTCCTTTG+TGG | 0.416787 | 2.4:-27319489 | MS.gene92189:CDS |
| TTGCAAACCCTTTCATTCTA+GGG | 0.423352 | 2.4:-27321922 | MS.gene92189:CDS |
| ACTTTGGTGGTAAGAATCTC+CGG | 0.437649 | 2.4:+27320048 | None:intergenic |
| GGGTATAATGTCTGAGACTT+TGG | 0.442292 | 2.4:+27320032 | None:intergenic |
| TCGTGAGGAATGGAAGGAAA+TGG | 0.443191 | 2.4:+27321890 | None:intergenic |
| GCGTTTGGTTGGCATGTGCC+CGG | 0.446971 | 2.4:-27320067 | MS.gene92189:CDS |
| TGGAAACCAGTATCAGTGTT+GGG | 0.452228 | 2.4:+27320237 | None:intergenic |
| TCCACAGTGGAATACATTAC+CGG | 0.452556 | 2.4:-27320117 | MS.gene92189:CDS |
| CACCGAGAAGTTCGTGTAAG+TGG | 0.461340 | 2.4:-27319994 | MS.gene92189:CDS |
| AGCCACTTACACGAACTTCT+CGG | 0.475846 | 2.4:+27319992 | None:intergenic |
| ACATCTCCTTTGTGGTGTGC+TGG | 0.485125 | 2.4:-27319481 | MS.gene92189:CDS |
| CATAAACGGTGTGTAGAAAT+GGG | 0.489419 | 2.4:-27319598 | MS.gene92189:CDS |
| GCCTAAATACAATTACTTTG+TGG | 0.489751 | 2.4:-27319704 | MS.gene92189:CDS |
| GAATGGAAGGAAATGGAAGT+GGG | 0.494037 | 2.4:+27321897 | None:intergenic |
| CTTCTATGCCAATACTTTGG+AGG | 0.495955 | 2.4:+27319887 | None:intergenic |
| TATTGAAAATCATCCGAAGC+TGG | 0.499544 | 2.4:-27320166 | MS.gene92189:CDS |
| ATTGAGTTTCGGCGTTTGGT+TGG | 0.499938 | 2.4:-27320078 | MS.gene92189:CDS |
| GGATTAAGCCTCGACATAAA+CGG | 0.510017 | 2.4:-27319612 | MS.gene92189:CDS |
| CACCTTCTTTGTCAGAGCTA+CGG | 0.513083 | 2.4:-27321865 | MS.gene92189:intron |
| CGGTGAAGGAACGTGAAGAC+GGG | 0.516327 | 2.4:+27320012 | None:intergenic |
| CTTTGGAGGAAGTACATAGT+AGG | 0.519338 | 2.4:+27319901 | None:intergenic |
| ATGTAATAAATCGTCGTCCT+CGG | 0.520791 | 2.4:-27319957 | MS.gene92189:CDS |
| AGTGACGCAGTAACCAGCTT+CGG | 0.520879 | 2.4:+27320153 | None:intergenic |
| GGAAATGGGGAGAGATTTGA+AGG | 0.522542 | 2.4:-27319680 | MS.gene92189:CDS |
| GTCTTTAATAATAAAGGAAG+AGG | 0.522895 | 2.4:+27319565 | None:intergenic |
| AGAAGGTGGGTCGTGAGGAA+TGG | 0.533372 | 2.4:+27321880 | None:intergenic |
| GGAATGGAAGGAAATGGAAG+TGG | 0.540119 | 2.4:+27321896 | None:intergenic |
| AGTGGGGACCCTAGAATGAA+AGG | 0.540231 | 2.4:+27321914 | None:intergenic |
| TTGGAAACCAGTATCAGTGT+TGG | 0.541510 | 2.4:+27320236 | None:intergenic |
| TAAATACAATTACTTTGTGG+TGG | 0.543115 | 2.4:-27319701 | MS.gene92189:CDS |
| GACACTACATGATAGCAAAT+GGG | 0.553619 | 2.4:+27319849 | None:intergenic |
| ATGTACTTCCTCCAAAGTAT+TGG | 0.554399 | 2.4:-27319895 | MS.gene92189:CDS |
| TCGGTGAAGGAACGTGAAGA+CGG | 0.554418 | 2.4:+27320011 | None:intergenic |
| AATTGCAGAGAAATCCATTC+CGG | 0.562172 | 2.4:+27320098 | None:intergenic |
| TTTGGGAATGTGGTGATCGG+TGG | 0.563121 | 2.4:+27321959 | None:intergenic |
| GGTGGGTCGTGAGGAATGGA+AGG | 0.564987 | 2.4:+27321884 | None:intergenic |
| GGGTTTGCAAAGACGAGTGA+AGG | 0.566400 | 2.4:+27321935 | None:intergenic |
| AAGCTAAATGAGAAATAATG+AGG | 0.567357 | 2.4:+27319643 | None:intergenic |
| GGATTTGGGAATGTGGTGAT+CGG | 0.571770 | 2.4:+27321956 | None:intergenic |
| TATAATGTCTGAGACTTTGG+TGG | 0.577681 | 2.4:+27320035 | None:intergenic |
| GTGGGGACCCTAGAATGAAA+GGG | 0.587170 | 2.4:+27321915 | None:intergenic |
| CTTTGGTGGTAAGAATCTCC+GGG | 0.592939 | 2.4:+27320049 | None:intergenic |
| GACAAAGAAGGTGGGTCGTG+AGG | 0.595553 | 2.4:+27321875 | None:intergenic |
| AACCGTAGCTCTGACAAAGA+AGG | 0.595582 | 2.4:+27321863 | None:intergenic |
| ATTACTTTGTGGTGGAAATG+GGG | 0.596286 | 2.4:-27319693 | MS.gene92189:CDS |
| GTGGTGATCGGTGGAAAACA+AGG | 0.598610 | 2.4:+27321968 | None:intergenic |
| TCTATACTTGATCAATATCA+CGG | 0.599535 | 2.4:+27319458 | None:intergenic |
| CCAAAGTATTGGCATAGAAG+AGG | 0.600971 | 2.4:-27319884 | MS.gene92189:CDS |
| TTACACGAACTTCTCGGTGA+AGG | 0.604014 | 2.4:+27319998 | None:intergenic |
| AGTGGAATACATTACCGGAA+TGG | 0.608509 | 2.4:-27320112 | MS.gene92189:CDS |
| CGTAGCTCTGACAAAGAAGG+TGG | 0.608988 | 2.4:+27321866 | None:intergenic |
| TCTACACACCGTTTATGTCG+AGG | 0.610087 | 2.4:+27319604 | None:intergenic |
| ATACTATAACAAAACAGCTG+AGG | 0.633616 | 2.4:+27319742 | None:intergenic |
| AATGGGGAGAGATTTGAAGG+AGG | 0.634987 | 2.4:-27319677 | MS.gene92189:CDS |
| GTCTTGTATCTAGAATCTAT+CGG | 0.638166 | 2.4:-27320207 | MS.gene92189:CDS |
| GAGTGAAGGATTTGGGAATG+TGG | 0.645827 | 2.4:+27321949 | None:intergenic |
| TCACGGCCAGCACACCACAA+AGG | 0.684243 | 2.4:+27319475 | None:intergenic |
| GAAACATCGATGTAGTGTCA+CGG | 0.690841 | 2.4:+27319773 | None:intergenic |
| TCCGGTAATGTATTCCACTG+TGG | 0.695997 | 2.4:+27320116 | None:intergenic |
| AATGGAAGGAAATGGAAGTG+GGG | 0.702093 | 2.4:+27321898 | None:intergenic |
| GTAGCTCTGACAAAGAAGGT+GGG | 0.703208 | 2.4:+27321867 | None:intergenic |
| ACATTGCAAATGATCAACCG+AGG | 0.728440 | 2.4:+27319940 | None:intergenic |
| AAACCAGTATCAGTGTTGGG+AGG | 0.731689 | 2.4:+27320240 | None:intergenic |
| TGGTGATCGGTGGAAAACAA+GGG | 0.748516 | 2.4:+27321969 | None:intergenic |
| TGACGATATAAAATCCACAG+TGG | 0.749902 | 2.4:-27320130 | MS.gene92189:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAGTATTAAGAATAATT+TGG | - | chr2.4:27321724-27321743 | MS.gene92189:intron | 10.0% |
| !!! | ATAATTTAGTTTTTATTACT+GGG | - | chr2.4:27319806-27319825 | MS.gene92189:CDS | 10.0% |
| !!! | ATTTTGTTTATTTTTTGAAA+CGG | + | chr2.4:27320645-27320664 | None:intergenic | 10.0% |
| !! | AACTATTAAAATCAACTAAA+AGG | - | chr2.4:27320315-27320334 | MS.gene92189:intron | 15.0% |
| !! | AACTATTAAAATCAACTAAA+AGG | + | chr2.4:27320334-27320315 | None:intergenic | 15.0% |
| !! | TATTCAATTCAATTAATCAA+AGG | + | chr2.4:27320244-27320263 | None:intergenic | 15.0% |
| !!! | AAATTTTCATTTTTCTTACT+GGG | - | chr2.4:27319636-27319655 | MS.gene92189:CDS | 15.0% |
| !!! | AAGAATTTAGTTATGTTTTT+GGG | - | chr2.4:27319991-27320010 | MS.gene92189:CDS | 15.0% |
| !!! | AAGTTTTCATTTTTATTACT+GGG | - | chr2.4:27319720-27319739 | MS.gene92189:CDS | 15.0% |
| !!! | ATAAACAAAATTCACTTTTT+AGG | - | chr2.4:27320654-27320673 | MS.gene92189:intron | 15.0% |
| !!! | ATTTTGCTTATTTTTTGAAA+TGG | - | chr2.4:27320725-27320744 | MS.gene92189:intron | 15.0% |
| !!! | GATAATTTAGTTTTTATTAC+TGG | - | chr2.4:27319805-27319824 | MS.gene92189:CDS | 15.0% |
| !!! | TAGTTGATTTTAATAGTTTA+GGG | - | chr2.4:27320398-27320417 | MS.gene92189:intron | 15.0% |
| !!! | TAGTTGATTTTAATAGTTTA+GGG | + | chr2.4:27320417-27320398 | None:intergenic | 15.0% |
| !!! | TTAGTTGATTTTAATAGTTT+AGG | - | chr2.4:27320397-27320416 | MS.gene92189:intron | 15.0% |
| !!! | TTAGTTGATTTTAATAGTTT+AGG | + | chr2.4:27320416-27320397 | None:intergenic | 15.0% |
| !!! | TTTTCTTTTTATTTTGCTTT+GGG | - | chr2.4:27320071-27320090 | MS.gene92189:CDS | 15.0% |
| !!! | TTTTTCTTTTTATTTTGCTT+TGG | - | chr2.4:27320070-27320089 | MS.gene92189:CDS | 15.0% |
| !! | TGAAAATTTGAAGATTATTG+AGG | + | chr2.4:27319625-27319644 | None:intergenic | 20.0% |
| !! | TTAATTTCATGCTTTAGTAA+AGG | - | chr2.4:27321069-27321088 | MS.gene92189:intron | 20.0% |
| !!! | ATAAGCAAAATTCACTTTTT+AGG | + | chr2.4:27320716-27320735 | None:intergenic | 20.0% |
| !!! | ATCGAATACTTTGAAAATAT+CGG | - | chr2.4:27321647-27321666 | MS.gene92189:intron | 20.0% |
| !!! | ATTTTATTAACGGATGTAAA+TGG | - | chr2.4:27320488-27320507 | MS.gene92189:intron | 20.0% |
| !!! | CAAATTTTCATTTTTCTTAC+TGG | - | chr2.4:27319635-27319654 | MS.gene92189:CDS | 20.0% |
| !!! | CAAGAATTTAGTTATGTTTT+TGG | - | chr2.4:27319990-27320009 | MS.gene92189:CDS | 20.0% |
| !!! | CAAGTTTTCATTTTTATTAC+TGG | - | chr2.4:27319719-27319738 | MS.gene92189:CDS | 20.0% |
| !!! | TACTTTAGATTTTTCTTGAT+TGG | - | chr2.4:27319858-27319877 | MS.gene92189:CDS | 20.0% |
| !!! | TATTTTCAAAGTATTCGATT+CGG | + | chr2.4:27321646-27321665 | None:intergenic | 20.0% |
| !!! | TCACTAGTCTTTAATAATAA+AGG | + | chr2.4:27321896-27321915 | None:intergenic | 20.0% |
| !!! | TTTCTTTTTATTTTGCTTTG+GGG | - | chr2.4:27320072-27320091 | MS.gene92189:CDS | 20.0% |
| !!! | TTTGGTTAGGATTTTATTAA+CGG | - | chr2.4:27320478-27320497 | MS.gene92189:intron | 20.0% |
| ! | AAGCTAAATGAGAAATAATG+AGG | + | chr2.4:27321812-27321831 | None:intergenic | 25.0% |
| ! | ACATTATATTACAGTGTGTT+TGG | - | chr2.4:27320460-27320479 | MS.gene92189:intron | 25.0% |
| ! | ACCAAATTGACAAATAGTTT+AGG | - | chr2.4:27320421-27320440 | MS.gene92189:intron | 25.0% |
| ! | ACCACAAAGTAATTGTATTT+AGG | + | chr2.4:27321752-27321771 | None:intergenic | 25.0% |
| ! | AGTGCTTAAATCTTATTGAT+AGG | - | chr2.4:27320108-27320127 | MS.gene92189:CDS | 25.0% |
| ! | ATGTATTACAGGTTGTAAAA+TGG | - | chr2.4:27321168-27321187 | MS.gene92189:intron | 25.0% |
| ! | CAACAGAATTCAACAATAAA+CGG | + | chr2.4:27320022-27320041 | None:intergenic | 25.0% |
| ! | CAGTAAAGTTTATCATGTAA+CGG | + | chr2.4:27321000-27321019 | None:intergenic | 25.0% |
| ! | CCAAATTGACAAATAGTTTA+GGG | - | chr2.4:27320422-27320441 | MS.gene92189:intron | 25.0% |
| ! | GAAATTAATGTGCATTTAAC+AGG | + | chr2.4:27321057-27321076 | None:intergenic | 25.0% |
| ! | GCTTAATAATGCTAAAGTTT+AGG | - | chr2.4:27319664-27319683 | MS.gene92189:CDS | 25.0% |
| ! | GTCTTTAATAATAAAGGAAG+AGG | + | chr2.4:27321890-27321909 | None:intergenic | 25.0% |
| ! | GTGCTTAAATCTTATTGATA+GGG | - | chr2.4:27320109-27320128 | MS.gene92189:CDS | 25.0% |
| ! | TAAATACAATTACTTTGTGG+TGG | - | chr2.4:27321751-27321770 | MS.gene92189:intron | 25.0% |
| ! | TAATAGTTTAGGGACTAAAT+TGG | + | chr2.4:27320303-27320322 | None:intergenic | 25.0% |
| ! | TGCTTAAATCTTATTGATAG+GGG | - | chr2.4:27320110-27320129 | MS.gene92189:CDS | 25.0% |
| ! | TGTCAATAACATACTTTCTT+TGG | - | chr2.4:27321020-27321039 | MS.gene92189:intron | 25.0% |
| ! | TTAAGCACTTAAAAACCAAA+GGG | + | chr2.4:27320183-27320202 | None:intergenic | 25.0% |
| !!! | ATTTTCAAAGTATTCGATTC+GGG | + | chr2.4:27321645-27321664 | None:intergenic | 25.0% |
| !!! | CTATTATTCTAAGACATTGT+TGG | - | chr2.4:27319957-27319976 | MS.gene92189:CDS | 25.0% |
| !!! | TGCTTATTTTTTGAAATGGA+GGG | - | chr2.4:27320729-27320748 | MS.gene92189:intron | 25.0% |
| !!! | TGTTTATTTTTTGAAACGGA+GGG | + | chr2.4:27320641-27320660 | None:intergenic | 25.0% |
| !!! | TTGCTTATTTTTTGAAATGG+AGG | - | chr2.4:27320728-27320747 | MS.gene92189:intron | 25.0% |
| !!! | TTGTTTATTTTTTGAAACGG+AGG | + | chr2.4:27320642-27320661 | None:intergenic | 25.0% |
| AAAAACCTTAATCCTTCAAG+AGG | + | chr2.4:27320054-27320073 | None:intergenic | 30.0% | |
| AACATAATTAAGCATAGACC+GGG | + | chr2.4:27319699-27319718 | None:intergenic | 30.0% | |
| ACATAACTAAATTCTTGCCA+AGG | + | chr2.4:27319987-27320006 | None:intergenic | 30.0% | |
| ATACTATAACAAAACAGCTG+AGG | + | chr2.4:27321713-27321732 | None:intergenic | 30.0% | |
| ATATTACAGTGTGTTTGGTT+AGG | - | chr2.4:27320465-27320484 | MS.gene92189:intron | 30.0% | |
| ATTAATGTGCATTTAACAGG+AGG | + | chr2.4:27321054-27321073 | None:intergenic | 30.0% | |
| ATTTCTCTGCAATTGAGTTT+CGG | - | chr2.4:27321363-27321382 | MS.gene92189:intron | 30.0% | |
| CCCTAAACTATTTGTCAATT+TGG | + | chr2.4:27320425-27320444 | None:intergenic | 30.0% | |
| CTTAAGCACTTAAAAACCAA+AGG | + | chr2.4:27320184-27320203 | None:intergenic | 30.0% | |
| GAACATAATTAAGCATAGAC+CGG | + | chr2.4:27319700-27319719 | None:intergenic | 30.0% | |
| GCCTAAATACAATTACTTTG+TGG | - | chr2.4:27321748-27321767 | MS.gene92189:intron | 30.0% | |
| GGAGTAAAAAACTTGATCAA+TGG | - | chr2.4:27320826-27320845 | MS.gene92189:intron | 30.0% | |
| TAATGAATGATGCTCTAGTT+TGG | - | chr2.4:27319890-27319909 | MS.gene92189:CDS | 30.0% | |
| TATACTCTCATCCATCAATT+TGG | + | chr2.4:27320364-27320383 | None:intergenic | 30.0% | |
| TATTTGCTTGCATGTTGAAT+TGG | - | chr2.4:27321099-27321118 | MS.gene92189:intron | 30.0% | |
| TGAAGATTATTGAGGTTGAA+AGG | + | chr2.4:27319617-27319636 | None:intergenic | 30.0% | |
| ! | AATTACTTTGTGGTGGAAAT+GGG | - | chr2.4:27321758-27321777 | MS.gene92189:intron | 30.0% |
| ! | ATGGATGAGAGTATAGTTTA+AGG | - | chr2.4:27320369-27320388 | MS.gene92189:intron | 30.0% |
| ! | GTCTTGTATCTAGAATCTAT+CGG | - | chr2.4:27321245-27321264 | MS.gene92189:intron | 30.0% |
| ! | TCTCATTTAGCTTAGAGAAT+AGG | - | chr2.4:27321819-27321838 | MS.gene92189:intron | 30.0% |
| !! | AAGTTTAGGTTTTTCTTACC+CGG | - | chr2.4:27319678-27319697 | MS.gene92189:CDS | 30.0% |
| !! | TGATACTGGTTTCCAAAAAA+AGG | - | chr2.4:27321223-27321242 | MS.gene92189:intron | 30.0% |
| !! | TTTTCAAAGTATTCGATTCG+GGG | + | chr2.4:27321644-27321663 | None:intergenic | 30.0% |
| !!! | CTAGATACAAGACCTTTTTT+TGG | + | chr2.4:27321238-27321257 | None:intergenic | 30.0% |
| !!! | CTTTGGTTTTTAAGTGCTTA+AGG | - | chr2.4:27320182-27320201 | MS.gene92189:CDS | 30.0% |
| AACAATAGTTGAGCAAAAGG+AGG | + | chr2.4:27320518-27320537 | None:intergenic | 35.0% | |
| AATTGCAGAGAAATCCATTC+CGG | + | chr2.4:27321357-27321376 | None:intergenic | 35.0% | |
| ACATAAACGGTGTGTAGAAA+TGG | - | chr2.4:27321853-27321872 | MS.gene92189:intron | 35.0% | |
| ACTTGATCAATGGTTCACTT+AGG | - | chr2.4:27320836-27320855 | MS.gene92189:intron | 35.0% | |
| ATGTAATAAATCGTCGTCCT+CGG | - | chr2.4:27321495-27321514 | MS.gene92189:intron | 35.0% | |
| ATGTACTTCCTCCAAAGTAT+TGG | - | chr2.4:27321557-27321576 | MS.gene92189:intron | 35.0% | |
| ATTAGACCAAGAAGCTATAG+AGG | - | chr2.4:27320805-27320824 | MS.gene92189:intron | 35.0% | |
| CATAAACGGTGTGTAGAAAT+GGG | - | chr2.4:27321854-27321873 | MS.gene92189:intron | 35.0% | |
| GAAAGCAATATGCATATCAG+AGG | + | chr2.4:27320945-27320964 | None:intergenic | 35.0% | |
| GACACTACATGATAGCAAAT+GGG | + | chr2.4:27321606-27321625 | None:intergenic | 35.0% | |
| GTCCATAAACTATACTCTCA+GGG | - | chr2.4:27320337-27320356 | MS.gene92189:intron | 35.0% | |
| TATTGAAAATCATCCGAAGC+TGG | - | chr2.4:27321286-27321305 | MS.gene92189:intron | 35.0% | |
| TCCAACAATAGTTGAGCAAA+AGG | + | chr2.4:27320521-27320540 | None:intergenic | 35.0% | |
| TCTATAGCTTCTTGGTCTAA+TGG | + | chr2.4:27320806-27320825 | None:intergenic | 35.0% | |
| TGACAAATAGTTTAGGGACT+AGG | - | chr2.4:27320428-27320447 | MS.gene92189:intron | 35.0% | |
| TGACGATATAAAATCCACAG+TGG | - | chr2.4:27321322-27321341 | MS.gene92189:intron | 35.0% | |
| TTATTGATAGGGGAAATTGC+TGG | - | chr2.4:27320120-27320139 | MS.gene92189:CDS | 35.0% | |
| TTGCAAACCCTTTCATTCTA+GGG | - | chr2.4:27319530-27319549 | MS.gene92189:CDS | 35.0% | |
| TTGCTATCAGGATAGTTACA+CGG | - | chr2.4:27320209-27320228 | MS.gene92189:CDS | 35.0% | |
| TTTACTCCTCTATAGCTTCT+TGG | + | chr2.4:27320814-27320833 | None:intergenic | 35.0% | |
| TTTGCAAACCCTTTCATTCT+AGG | - | chr2.4:27319529-27319548 | MS.gene92189:CDS | 35.0% | |
| ! | ATTACTTTGTGGTGGAAATG+GGG | - | chr2.4:27321759-27321778 | MS.gene92189:intron | 35.0% |
| ! | CAATTACTTTGTGGTGGAAA+TGG | - | chr2.4:27321757-27321776 | MS.gene92189:intron | 35.0% |
| ! | CACAAAGGAGATGTTTTCAA+GGG | + | chr2.4:27321965-27321984 | None:intergenic | 35.0% |
| ! | GCTGGTACATGATTGTATTT+TGG | - | chr2.4:27320138-27320157 | MS.gene92189:CDS | 35.0% |
| ! | TATAATGTCTGAGACTTTGG+TGG | + | chr2.4:27321420-27321439 | None:intergenic | 35.0% |
| ! | TCCTTTTGCTCAACTATTGT+TGG | - | chr2.4:27320517-27320536 | MS.gene92189:intron | 35.0% |
| AATGGAAGGAAATGGAAGTG+GGG | + | chr2.4:27319557-27319576 | None:intergenic | 40.0% | |
| ACATTGCAAATGATCAACCG+AGG | + | chr2.4:27321515-27321534 | None:intergenic | 40.0% | |
| ACTCAGTAGTCAGTATAGGA+TGG | + | chr2.4:27320975-27320994 | None:intergenic | 40.0% | |
| AGTAGTCAGTATAGGATGGA+TGG | + | chr2.4:27320971-27320990 | None:intergenic | 40.0% | |
| AGTGGAATACATTACCGGAA+TGG | - | chr2.4:27321340-27321359 | MS.gene92189:intron | 40.0% | |
| CAAAGACGAGTGAAGGATTT+GGG | + | chr2.4:27319513-27319532 | None:intergenic | 40.0% | |
| CCTCTTCTATGCCAATACTT+TGG | + | chr2.4:27321571-27321590 | None:intergenic | 40.0% | |
| CCTTGAAAACATCTCCTTTG+TGG | - | chr2.4:27321963-27321982 | MS.gene92189:CDS | 40.0% | |
| CGACACTACATGATAGCAAA+TGG | + | chr2.4:27321607-27321626 | None:intergenic | 40.0% | |
| CTGTGCTTCTGATGTATTAC+AGG | - | chr2.4:27321157-27321176 | MS.gene92189:intron | 40.0% | |
| CTTCTATGCCAATACTTTGG+AGG | + | chr2.4:27321568-27321587 | None:intergenic | 40.0% | |
| CTTTGCCTCTTGAAGGATTA+AGG | - | chr2.4:27320046-27320065 | MS.gene92189:CDS | 40.0% | |
| GAAACATCGATGTAGTGTCA+CGG | + | chr2.4:27321682-27321701 | None:intergenic | 40.0% | |
| GAATGGAAGGAAATGGAAGT+GGG | + | chr2.4:27319558-27319577 | None:intergenic | 40.0% | |
| GCCACAGAGCATAAAACTAA+GGG | + | chr2.4:27320570-27320589 | None:intergenic | 40.0% | |
| GGATACTCAGTAGTCAGTAT+AGG | + | chr2.4:27320979-27320998 | None:intergenic | 40.0% | |
| GGATTAAGCCTCGACATAAA+CGG | - | chr2.4:27321840-27321859 | MS.gene92189:intron | 40.0% | |
| GGTCCATAAACTATACTCTC+AGG | - | chr2.4:27320336-27320355 | MS.gene92189:intron | 40.0% | |
| GTAGTCAGTATAGGATGGAT+GGG | + | chr2.4:27320970-27320989 | None:intergenic | 40.0% | |
| TCCACAGTGGAATACATTAC+CGG | - | chr2.4:27321335-27321354 | MS.gene92189:intron | 40.0% | |
| TGGAAACCAGTATCAGTGTT+GGG | + | chr2.4:27321218-27321237 | None:intergenic | 40.0% | |
| TGGTGAGAGAGTGATAGTTT+AGG | + | chr2.4:27320283-27320302 | None:intergenic | 40.0% | |
| TTGGAAACCAGTATCAGTGT+TGG | + | chr2.4:27321219-27321238 | None:intergenic | 40.0% | |
| TTGGGAGGTAGAGTTTGATT+TGG | + | chr2.4:27321200-27321219 | None:intergenic | 40.0% | |
| TTGTGTTCTTTGCCTCTTGA+AGG | - | chr2.4:27320039-27320058 | MS.gene92189:CDS | 40.0% | |
| ! | AAGACATTGTTGGTTGTCCT+TGG | - | chr2.4:27319967-27319986 | MS.gene92189:CDS | 40.0% |
| ! | ACTTTGGTGGTAAGAATCTC+CGG | + | chr2.4:27321407-27321426 | None:intergenic | 40.0% |
| ! | ATGCTCTAGTTTGGCTGTTT+GGG | - | chr2.4:27319899-27319918 | MS.gene92189:CDS | 40.0% |
| ! | CCACAAAGGAGATGTTTTCA+AGG | + | chr2.4:27321966-27321985 | None:intergenic | 40.0% |
| ! | CTGTAATACATCAGAAGCAC+AGG | + | chr2.4:27321159-27321178 | None:intergenic | 40.0% |
| ! | CTTTGGAGGAAGTACATAGT+AGG | + | chr2.4:27321554-27321573 | None:intergenic | 40.0% |
| ! | GCTTAAGGATTCTTGCTATC+AGG | - | chr2.4:27320197-27320216 | MS.gene92189:CDS | 40.0% |
| ! | GGGTATAATGTCTGAGACTT+TGG | + | chr2.4:27321423-27321442 | None:intergenic | 40.0% |
| ! | GTCCCTGAGAGTATAGTTTA+TGG | + | chr2.4:27320342-27320361 | None:intergenic | 40.0% |
| !! | CCAAAGTATTGGCATAGAAG+AGG | - | chr2.4:27321568-27321587 | MS.gene92189:intron | 40.0% |
| AATGGGGAGAGATTTGAAGG+AGG | - | chr2.4:27321775-27321794 | MS.gene92189:intron | 45.0% | |
| ACCAGAGAACTGATATCACG+AGG | + | chr2.4:27320918-27320937 | None:intergenic | 45.0% | |
| ACTCTCAGGGACCAAATTGA+TGG | - | chr2.4:27320350-27320369 | MS.gene92189:intron | 45.0% | |
| AGCCACTTACACGAACTTCT+CGG | + | chr2.4:27321463-27321482 | None:intergenic | 45.0% | |
| ATCCCCCGTCGAAAGAATAA+GGG | + | chr2.4:27320600-27320619 | None:intergenic | 45.0% | |
| ATTGAGTTTCGGCGTTTGGT+TGG | - | chr2.4:27321374-27321393 | MS.gene92189:intron | 45.0% | |
| CACCTTCTTTGTCAGAGCTA+CGG | - | chr2.4:27319587-27319606 | MS.gene92189:CDS | 45.0% | |
| CGCCACAGAGCATAAAACTA+AGG | + | chr2.4:27320571-27320590 | None:intergenic | 45.0% | |
| GAGTGAAGGATTTGGGAATG+TGG | + | chr2.4:27319506-27319525 | None:intergenic | 45.0% | |
| GCAAAGACGAGTGAAGGATT+TGG | + | chr2.4:27319514-27319533 | None:intergenic | 45.0% | |
| GGAAATGGGGAGAGATTTGA+AGG | - | chr2.4:27321772-27321791 | MS.gene92189:intron | 45.0% | |
| GGAATGGAAGGAAATGGAAG+TGG | + | chr2.4:27319559-27319578 | None:intergenic | 45.0% | |
| GGATTTGGGAATGTGGTGAT+CGG | + | chr2.4:27319499-27319518 | None:intergenic | 45.0% | |
| TCCGGTAATGTATTCCACTG+TGG | + | chr2.4:27321339-27321358 | None:intergenic | 45.0% | |
| TCCTCGTGATATCAGTTCTC+TGG | - | chr2.4:27320914-27320933 | MS.gene92189:intron | 45.0% | |
| TCGTGAGGAATGGAAGGAAA+TGG | + | chr2.4:27319565-27319584 | None:intergenic | 45.0% | |
| TCTACACACCGTTTATGTCG+AGG | + | chr2.4:27321851-27321870 | None:intergenic | 45.0% | |
| TGCAATTGAGTTTCGGCGTT+TGG | - | chr2.4:27321370-27321389 | MS.gene92189:intron | 45.0% | |
| TGCGACCCTTATTCTTTCGA+CGG | - | chr2.4:27320592-27320611 | MS.gene92189:intron | 45.0% | |
| TGGTGATCGGTGGAAAACAA+GGG | + | chr2.4:27319486-27319505 | None:intergenic | 45.0% | |
| TTACACGAACTTCTCGGTGA+AGG | + | chr2.4:27321457-27321476 | None:intergenic | 45.0% | |
| ! | AAACCAGTATCAGTGTTGGG+AGG | + | chr2.4:27321215-27321234 | None:intergenic | 45.0% |
| ! | AGTTGCTACTTGCTACCCTT+TGG | - | chr2.4:27320165-27320184 | MS.gene92189:CDS | 45.0% |
| ! | CTTTGGTGGTAAGAATCTCC+GGG | + | chr2.4:27321406-27321425 | None:intergenic | 45.0% |
| ! | GATGCTCTAGTTTGGCTGTT+TGG | - | chr2.4:27319898-27319917 | MS.gene92189:CDS | 45.0% |
| !! | AACCGTAGCTCTGACAAAGA+AGG | + | chr2.4:27319592-27319611 | None:intergenic | 45.0% |
| !! | GTAGCTCTGACAAAGAAGGT+GGG | + | chr2.4:27319588-27319607 | None:intergenic | 45.0% |
| !!! | GCCCTTAGTTTTATGCTCTG+TGG | - | chr2.4:27320566-27320585 | MS.gene92189:intron | 45.0% |
| ACATCTCCTTTGTGGTGTGC+TGG | - | chr2.4:27321971-27321990 | MS.gene92189:CDS | 50.0% | |
| AGTGACGCAGTAACCAGCTT+CGG | + | chr2.4:27321302-27321321 | None:intergenic | 50.0% | |
| AGTGGGGACCCTAGAATGAA+AGG | + | chr2.4:27319541-27319560 | None:intergenic | 50.0% | |
| CACCGAGAAGTTCGTGTAAG+TGG | - | chr2.4:27321458-27321477 | MS.gene92189:intron | 50.0% | |
| CATCCCCCGTCGAAAGAATA+AGG | + | chr2.4:27320601-27320620 | None:intergenic | 50.0% | |
| CGACCCTTATTCTTTCGACG+GGG | - | chr2.4:27320594-27320613 | MS.gene92189:intron | 50.0% | |
| CTACCTCCCAACACTGATAC+TGG | - | chr2.4:27321209-27321228 | MS.gene92189:intron | 50.0% | |
| GACCCTTATTCTTTCGACGG+GGG | - | chr2.4:27320595-27320614 | MS.gene92189:intron | 50.0% | |
| GCGACCCTTATTCTTTCGAC+GGG | - | chr2.4:27320593-27320612 | MS.gene92189:intron | 50.0% | |
| GGGTTTGCAAAGACGAGTGA+AGG | + | chr2.4:27319520-27319539 | None:intergenic | 50.0% | |
| GTGGGGACCCTAGAATGAAA+GGG | + | chr2.4:27319540-27319559 | None:intergenic | 50.0% | |
| GTGGTGATCGGTGGAAAACA+AGG | + | chr2.4:27319487-27319506 | None:intergenic | 50.0% | |
| TCGGTGAAGGAACGTGAAGA+CGG | + | chr2.4:27321444-27321463 | None:intergenic | 50.0% | |
| TTTGGGAATGTGGTGATCGG+TGG | + | chr2.4:27319496-27319515 | None:intergenic | 50.0% | |
| !! | CGTAGCTCTGACAAAGAAGG+TGG | + | chr2.4:27319589-27319608 | None:intergenic | 50.0% |
| AGAAGGTGGGTCGTGAGGAA+TGG | + | chr2.4:27319575-27319594 | None:intergenic | 55.0% | |
| CGGTGAAGGAACGTGAAGAC+GGG | + | chr2.4:27321443-27321462 | None:intergenic | 55.0% | |
| GACAAAGAAGGTGGGTCGTG+AGG | + | chr2.4:27319580-27319599 | None:intergenic | 55.0% | |
| GCGTTTGGTTGGCATGTGCC+CGG | - | chr2.4:27321385-27321404 | MS.gene92189:intron | 60.0% | |
| GGTGGGTCGTGAGGAATGGA+AGG | + | chr2.4:27319571-27319590 | None:intergenic | 60.0% | |
| TCACGGCCAGCACACCACAA+AGG | + | chr2.4:27321980-27321999 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 27319459 | 27322015 | 27319459 | ID=MS.gene92189 |
| chr2.4 | mRNA | 27319459 | 27322015 | 27319459 | ID=MS.gene92189.t1;Parent=MS.gene92189 |
| chr2.4 | exon | 27321866 | 27322015 | 27321866 | ID=MS.gene92189.t1.exon1;Parent=MS.gene92189.t1 |
| chr2.4 | CDS | 27321866 | 27322015 | 27321866 | ID=cds.MS.gene92189.t1;Parent=MS.gene92189.t1 |
| chr2.4 | exon | 27319459 | 27320295 | 27319459 | ID=MS.gene92189.t1.exon2;Parent=MS.gene92189.t1 |
| chr2.4 | CDS | 27319459 | 27320295 | 27319459 | ID=cds.MS.gene92189.t1;Parent=MS.gene92189.t1 |
| Gene Sequence |
| Protein sequence |
