AlfalfaGEDB | MS.gene98461

M. sativa cultivar XinJiangDaYe / MS.gene98461

KEGG: K14823
GO: -
PFAM: PF05890.15

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98461.t1	XP_003612737.2	97.9	289	6	0	1	289	1	289	5.80E-106	394

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98461.t1	Q9LUJ5	56.2	258	106	4	35	290	41	293	7.1e-44	179.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98461.t1	G7KAW7	97.9	289	6	0	1	289	1	289	4.2e-106	394.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049283	MS.gene98461	0.805782	1.13E-49	-1.69E-46
MS.gene049825	MS.gene98461	0.802105	6.57E-49	-1.69E-46
MS.gene051003	MS.gene98461	0.80377	2.97E-49	-1.69E-46
MS.gene051363	MS.gene98461	0.815989	6.97E-52	-1.69E-46
MS.gene051848	MS.gene98461	-0.808712	2.71E-50	-1.69E-46
MS.gene05188	MS.gene98461	0.845253	4.56E-59	-1.69E-46
MS.gene051975	MS.gene98461	0.837964	3.81E-57	-1.69E-46
MS.gene052582	MS.gene98461	0.804018	2.64E-49	-1.69E-46
MS.gene052584	MS.gene98461	0.811927	5.48E-51	-1.69E-46
MS.gene053058	MS.gene98461	0.820138	8.04E-53	-1.69E-46
MS.gene053080	MS.gene98461	0.801917	7.18E-49	-1.69E-46
MS.gene05308	MS.gene98461	0.800281	1.55E-48	-1.69E-46
MS.gene053226	MS.gene98461	0.838027	3.67E-57	-1.69E-46
MS.gene05365	MS.gene98461	0.803769	2.98E-49	-1.69E-46
MS.gene053931	MS.gene98461	0.80686	6.70E-50	-1.69E-46
MS.gene05517	MS.gene98461	0.815551	8.73E-52	-1.69E-46
MS.gene055555	MS.gene98461	0.805646	1.21E-49	-1.69E-46
MS.gene055808	MS.gene98461	0.828124	1.07E-54	-1.69E-46
MS.gene056091	MS.gene98461	0.82198	3.03E-53	-1.69E-46
MS.gene056215	MS.gene98461	0.831161	1.95E-55	-1.69E-46
MS.gene056403	MS.gene98461	0.862891	3.68E-64	-1.69E-46
MS.gene056605	MS.gene98461	0.875174	3.79E-68	-1.69E-46
MS.gene05689	MS.gene98461	0.874501	6.43E-68	-1.69E-46
MS.gene056986	MS.gene98461	0.838411	2.92E-57	-1.69E-46
MS.gene057208	MS.gene98461	0.805532	1.28E-49	-1.69E-46
MS.gene057693	MS.gene98461	0.80146	8.91E-49	-1.69E-46
MS.gene058126	MS.gene98461	0.809896	1.51E-50	-1.69E-46
MS.gene058548	MS.gene98461	0.804545	2.05E-49	-1.69E-46
MS.gene058783	MS.gene98461	0.802401	5.71E-49	-1.69E-46
MS.gene059146	MS.gene98461	0.850571	1.56E-60	-1.69E-46
MS.gene05953	MS.gene98461	0.803209	3.89E-49	-1.69E-46
MS.gene05954	MS.gene98461	0.819121	1.37E-52	-1.69E-46
MS.gene059830	MS.gene98461	0.816916	4.32E-52	-1.69E-46
MS.gene05985	MS.gene98461	-0.817072	3.99E-52	-1.69E-46
MS.gene059901	MS.gene98461	-0.856501	3.08E-62	-1.69E-46
MS.gene059935	MS.gene98461	0.882377	1.10E-70	-1.69E-46
MS.gene06011	MS.gene98461	0.817195	3.74E-52	-1.69E-46
MS.gene060365	MS.gene98461	0.806911	6.54E-50	-1.69E-46
MS.gene060429	MS.gene98461	0.852126	5.67E-61	-1.69E-46
MS.gene060586	MS.gene98461	0.817516	3.17E-52	-1.69E-46
MS.gene060763	MS.gene98461	0.823509	1.33E-53	-1.69E-46
MS.gene060830	MS.gene98461	0.872702	2.59E-67	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene98461	MS.gene022752	PPI
MS.gene45646	MS.gene98461	PPI
MS.gene98461	MS.gene034931	PPI
MS.gene98461	MS.gene64512	PPI
MS.gene31515	MS.gene98461	PPI
MS.gene059878	MS.gene98461	PPI
MS.gene59369	MS.gene98461	PPI
MS.gene98461	MS.gene071916	PPI
MS.gene039132	MS.gene98461	PPI
MS.gene98461	MS.gene020215	PPI
MS.gene98461	MS.gene060923	PPI
MS.gene073324	MS.gene98461	PPI
MS.gene031378	MS.gene98461	PPI
MS.gene058018	MS.gene98461	PPI
MS.gene003435	MS.gene98461	PPI
MS.gene98461	MS.gene77667	PPI
MS.gene98461	MS.gene99779	PPI
MS.gene98461	MS.gene072064	PPI
MS.gene98461	MS.gene91244	PPI
MS.gene065652	MS.gene98461	PPI
MS.gene98461	MS.gene002038	PPI
MS.gene98461	MS.gene29719	PPI
MS.gene073150	MS.gene98461	PPI
MS.gene51111	MS.gene98461	PPI
MS.gene98461	MS.gene047206	PPI
MS.gene012331	MS.gene98461	PPI
MS.gene98889	MS.gene98461	PPI
MS.gene063385	MS.gene98461	PPI
MS.gene52150	MS.gene98461	PPI
MS.gene064180	MS.gene98461	PPI
MS.gene96312	MS.gene98461	PPI
MS.gene061905	MS.gene98461	PPI
MS.gene98461	MS.gene01172	PPI
MS.gene98461	MS.gene00612	PPI
MS.gene92970	MS.gene98461	PPI
MS.gene047421	MS.gene98461	PPI
MS.gene98461	MS.gene046040	PPI
MS.gene98461	MS.gene000480	PPI
MS.gene98461	MS.gene57660	PPI
MS.gene98461	MS.gene90360	PPI
MS.gene059880	MS.gene98461	PPI
MS.gene94183	MS.gene98461	PPI
MS.gene98461	MS.gene39294	PPI
MS.gene069038	MS.gene98461	PPI
MS.gene98461	MS.gene94588	PPI
MS.gene98461	MS.gene47347	PPI
MS.gene95758	MS.gene98461	PPI
MS.gene95644	MS.gene98461	PPI
MS.gene98461	MS.gene77392	PPI
MS.gene98461	MS.gene45344	PPI
MS.gene012333	MS.gene98461	PPI
MS.gene040601	MS.gene98461	PPI
MS.gene09845	MS.gene98461	PPI
MS.gene98461	MS.gene002204	PPI
MS.gene018553	MS.gene98461	PPI
MS.gene029547	MS.gene98461	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98461.t1	MTR_5g028350	97.232	289	8	0	1	289	1	289	0.0	566
MS.gene98461.t1	MTR_8g075400	76.552	290	37	4	1	289	14	273	3.53e-138	391
MS.gene98461.t1	MTR_8g075400	87.500	224	26	1	1	224	1	222	7.17e-129	367

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98461.t1	AT3G22660	65.188	293	87	6	2	290	12	293	1.91e-126	362

Find 70 sgRNAs with CRISPR-Local

Find 87 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCGGCCTCCAAAACCAAATT+TGG	0.189093	5.4:+18906516	None:intergenic
GATACTAAGAATGCCAAATT+TGG	0.209577	5.4:-18906529	MS.gene98461:CDS
GCTGAAACAACTAATGATTT+TGG	0.209631	5.4:-18906469	MS.gene98461:CDS
AAGAATGCCAAATTTGGTTT+TGG	0.274042	5.4:-18906523	MS.gene98461:CDS
GATTGAAATGGAGGTGTCTT+TGG	0.301021	5.4:-18907277	None:intergenic
TCAAAGCTCAAAGACTTATC+TGG	0.326167	5.4:+18906670	None:intergenic
AGAAAGGGCCAAGCAGAAAA+AGG	0.351345	5.4:-18906764	MS.gene98461:CDS
TCAGTTTCACCGTCAATCAT+TGG	0.370634	5.4:+18907243	None:intergenic
TCTGCTTCTTCGATCCCTTC+CGG	0.371874	5.4:+18906497	None:intergenic
TGCTTCCAATCCACATTCTC+AGG	0.372391	5.4:+18907093	None:intergenic
TGACGGTGAAACTGAAGATT+TGG	0.372926	5.4:-18907235	MS.gene98461:CDS
TTCAGTAAGGGTTCTGCTGC+TGG	0.375909	5.4:-18906442	MS.gene98461:CDS
TTACCTCCTGACCGATCTCC+TGG	0.396701	5.4:+18906598	None:intergenic
AGACAATCTCTTTGCTTCCC+TGG	0.401049	5.4:+18906813	None:intergenic
AGATAAGTCTTTGAGCTTTG+AGG	0.404345	5.4:-18906668	MS.gene98461:CDS
CTGAAGAGAGAAGAAAGGCC+AGG	0.422247	5.4:-18906831	MS.gene98461:CDS
CTCTCCATTGATATTGATCA+AGG	0.429280	5.4:-18907066	MS.gene98461:CDS
AGTCACAGAAATTGAAAGAA+AGG	0.458750	5.4:-18906780	MS.gene98461:CDS
TAGTCAGCAGGTCTCAAGAA+AGG	0.478435	5.4:+18906937	None:intergenic
CTTTGAGAAGCTTGAGTCGA+TGG	0.481104	5.4:-18906965	MS.gene98461:CDS
TGCTGACTATTACGCAGAAA+TGG	0.488469	5.4:-18906923	MS.gene98461:CDS
CTCCCCTTGATCAATATCAA+TGG	0.492911	5.4:+18907062	None:intergenic
CCGATCTCCTGGAGATACTC+CGG	0.494759	5.4:+18906609	None:intergenic
AGGAGATCGGTCAGGAGGTA+AGG	0.497659	5.4:-18906596	MS.gene98461:CDS
AGTCAGCAGGTCTCAAGAAA+GGG	0.501463	5.4:+18906938	None:intergenic
GGGAGATAGCCACATGGAAA+AGG	0.502899	5.4:-18906896	MS.gene98461:CDS
CATAAGCTGGCCTGAGAATG+TGG	0.503617	5.4:-18907103	MS.gene98461:CDS
TCTTCTGAATCTGATTCAAA+CGG	0.503965	5.4:+18907198	None:intergenic
GTCACAGAAATTGAAAGAAA+GGG	0.504083	5.4:-18906779	MS.gene98461:CDS
GCAAAGCAAGCTATGGGAAA+GGG	0.507585	5.4:-18906574	MS.gene98461:CDS
ATTAGATGAGAAGCGGAAGA+TGG	0.510158	5.4:-18906860	MS.gene98461:CDS
GGCATTGGAGGGAACTAGAC+AGG	0.514311	5.4:-18906989	MS.gene98461:CDS
AGGTAAGGCAAAGCAAGCTA+TGG	0.517763	5.4:-18906581	MS.gene98461:CDS
ATGGAGGTGTCTTTGGTTAA+CGG	0.521891	5.4:-18907270	MS.gene98461:CDS
TTTGAGAAGCTTGAGTCGAT+GGG	0.525398	5.4:-18906964	MS.gene98461:CDS
GGAGGCTGAAGAGAGAAGAA+AGG	0.530598	5.4:-18906836	MS.gene98461:CDS
CAAAGACTTATCTGGAGCAT+CGG	0.536868	5.4:+18906678	None:intergenic
AGATGAGAAGCGGAAGATGG+AGG	0.539024	5.4:-18906857	MS.gene98461:CDS
AACGGTGATCCAATGATTGA+CGG	0.554237	5.4:-18907252	MS.gene98461:CDS
AGCAAAGAGATTGTCTAAAG+AGG	0.557828	5.4:-18906806	MS.gene98461:CDS
AAGAGGCCCGGAGTATCTCC+AGG	0.558097	5.4:-18906616	MS.gene98461:CDS
CTCCATTGATATTGATCAAG+GGG	0.559298	5.4:-18907064	MS.gene98461:CDS
GTATCTCCAGGAGATCGGTC+AGG	0.562327	5.4:-18906604	MS.gene98461:CDS
CGATCTCCTGGAGATACTCC+GGG	0.563080	5.4:+18906610	None:intergenic
AGTAGATGTGAACGATGACT+TGG	0.565329	5.4:-18907037	MS.gene98461:CDS
ATTTCTGCGTAATAGTCAGC+AGG	0.568461	5.4:+18906925	None:intergenic
ATAAACTAGGAGACATAAGC+TGG	0.571619	5.4:-18907116	MS.gene98461:CDS
TGAAACTGAAGATTTGGATG+AGG	0.572001	5.4:-18907229	MS.gene98461:CDS
CCGGAGTATCTCCAGGAGAT+CGG	0.576336	5.4:-18906609	MS.gene98461:CDS
AAGTCTTTGAGCTTTGAGGA+TGG	0.576787	5.4:-18906664	MS.gene98461:CDS
TGAAGAGAGAAGAAAGGCCA+GGG	0.579670	5.4:-18906830	MS.gene98461:CDS
CATCGACTCAAGCTTCTCAA+AGG	0.582387	5.4:+18906966	None:intergenic
GGCAAAGCAAGCTATGGGAA+AGG	0.584114	5.4:-18906575	MS.gene98461:CDS
TCTCCATTGATATTGATCAA+GGG	0.594778	5.4:-18907065	MS.gene98461:CDS
GGTAAGGCAAAGCAAGCTAT+GGG	0.598074	5.4:-18906580	MS.gene98461:CDS
GGAAGCAGAGACAACAGAGT+GGG	0.599709	5.4:-18906714	MS.gene98461:CDS
ACATTGAATCTGTTAAGAAG+TGG	0.600860	5.4:-18906738	MS.gene98461:CDS
TGAGAAGCGGAAGATGGAGG+AGG	0.603783	5.4:-18906854	MS.gene98461:CDS
TTGAATCTGTTAAGAAGTGG+AGG	0.608378	5.4:-18906735	MS.gene98461:CDS
CTATTACGCAGAAATGGTGA+AGG	0.608653	5.4:-18906917	MS.gene98461:CDS
GTCGGCTATTAGATGAGAAG+CGG	0.609331	5.4:-18906867	MS.gene98461:CDS
GCTGGCCTGAGAATGTGGAT+TGG	0.611875	5.4:-18907098	MS.gene98461:CDS
ACATGGAAAAGGTGAAAAGT+CGG	0.619320	5.4:-18906885	MS.gene98461:CDS
CAACAGAGTGGGTTTGCTGA+CGG	0.625190	5.4:-18906703	MS.gene98461:CDS
AGGAAGCAGAGACAACAGAG+TGG	0.651328	5.4:-18906715	MS.gene98461:CDS
GATGCTATATTAGATAAACT+AGG	0.652623	5.4:-18907129	MS.gene98461:CDS
CATTGATATTGATCAAGGGG+AGG	0.657330	5.4:-18907061	MS.gene98461:CDS
TCTCCAGGAGATCGGTCAGG+AGG	0.664692	5.4:-18906601	MS.gene98461:CDS
TATTACGCAGAAATGGTGAA+GGG	0.681147	5.4:-18906916	MS.gene98461:CDS
GGTGAAGGGAGATAGCCACA+TGG	0.757517	5.4:-18906902	MS.gene98461:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	GATGCTATATTAGATAAACT+AGG	-	chr5.4:18906561-18906580	MS.gene98461:CDS	25.0%
!!	TTAGTATCTCTTTTCTTTTG+CGG	+	chr5.4:18907149-18907168	None:intergenic	25.0%
!!!	AAACAACTAATGATTTTGGT+GGG	-	chr5.4:18907225-18907244	MS.gene98461:CDS	25.0%
	ACATTGAATCTGTTAAGAAG+TGG	-	chr5.4:18906952-18906971	MS.gene98461:CDS	30.0%
	AGTCACAGAAATTGAAAGAA+AGG	-	chr5.4:18906910-18906929	MS.gene98461:CDS	30.0%
	GATACTAAGAATGCCAAATT+TGG	-	chr5.4:18907161-18907180	MS.gene98461:CDS	30.0%
	GTCACAGAAATTGAAAGAAA+GGG	-	chr5.4:18906911-18906930	MS.gene98461:CDS	30.0%
	TCTCCATTGATATTGATCAA+GGG	-	chr5.4:18906625-18906644	MS.gene98461:CDS	30.0%
	TCTTCTGAATCTGATTCAAA+CGG	+	chr5.4:18906495-18906514	None:intergenic	30.0%
!	GAAACAACTAATGATTTTGG+TGG	-	chr5.4:18907224-18907243	MS.gene98461:CDS	30.0%
!	GCTGAAACAACTAATGATTT+TGG	-	chr5.4:18907221-18907240	MS.gene98461:CDS	30.0%
!!	AAGAATGCCAAATTTGGTTT+TGG	-	chr5.4:18907167-18907186	MS.gene98461:CDS	30.0%
!!!	TTATTCACTGCAGTTTTAGA+TGG	+	chr5.4:18906537-18906556	None:intergenic	30.0%
	ACATGGAAAAGGTGAAAAGT+CGG	-	chr5.4:18906805-18906824	MS.gene98461:CDS	35.0%
	AGATAAGTCTTTGAGCTTTG+AGG	-	chr5.4:18907022-18907041	MS.gene98461:CDS	35.0%
	AGCAAAGAGATTGTCTAAAG+AGG	-	chr5.4:18906884-18906903	MS.gene98461:CDS	35.0%
	ATAAACTAGGAGACATAAGC+TGG	-	chr5.4:18906574-18906593	MS.gene98461:CDS	35.0%
	CTCCATTGATATTGATCAAG+GGG	-	chr5.4:18906626-18906645	MS.gene98461:CDS	35.0%
	CTCTCCATTGATATTGATCA+AGG	-	chr5.4:18906624-18906643	MS.gene98461:CDS	35.0%
	TATTACGCAGAAATGGTGAA+GGG	-	chr5.4:18906774-18906793	MS.gene98461:CDS	35.0%
	TCAAAGCTCAAAGACTTATC+TGG	+	chr5.4:18907023-18907042	None:intergenic	35.0%
	TCGAGAGATCAAAGAAAAAG+AGG	-	chr5.4:18907057-18907076	MS.gene98461:CDS	35.0%
	TGAAACTGAAGATTTGGATG+AGG	-	chr5.4:18906461-18906480	MS.gene98461:CDS	35.0%
	TTGAATCTGTTAAGAAGTGG+AGG	-	chr5.4:18906955-18906974	MS.gene98461:CDS	35.0%
!	AATGTCATCCTTTTTCTGCT+TGG	+	chr5.4:18906937-18906956	None:intergenic	35.0%
!!!	AATGCCAAATTTGGTTTTGG+AGG	-	chr5.4:18907170-18907189	MS.gene98461:CDS	35.0%
	AACGGTGATCCAATGATTGA+CGG	-	chr5.4:18906438-18906457	MS.gene98461:CDS	40.0%
	AGATCAAAGAAAAAGAGGCC+CGG	-	chr5.4:18907062-18907081	MS.gene98461:CDS	40.0%
	AGTAGATGTGAACGATGACT+TGG	-	chr5.4:18906653-18906672	MS.gene98461:CDS	40.0%
	ATTAGATGAGAAGCGGAAGA+TGG	-	chr5.4:18906830-18906849	MS.gene98461:CDS	40.0%
	ATTTCTGCGTAATAGTCAGC+AGG	+	chr5.4:18906768-18906787	None:intergenic	40.0%
	CATTGATATTGATCAAGGGG+AGG	-	chr5.4:18906629-18906648	MS.gene98461:CDS	40.0%
	CTATTACGCAGAAATGGTGA+AGG	-	chr5.4:18906773-18906792	MS.gene98461:CDS	40.0%
	CTCCCCTTGATCAATATCAA+TGG	+	chr5.4:18906631-18906650	None:intergenic	40.0%
	TCAGTTTCACCGTCAATCAT+TGG	+	chr5.4:18906450-18906469	None:intergenic	40.0%
	TGACGGTGAAACTGAAGATT+TGG	-	chr5.4:18906455-18906474	MS.gene98461:CDS	40.0%
	TTTGAGAAGCTTGAGTCGAT+GGG	-	chr5.4:18906726-18906745	MS.gene98461:CDS	40.0%
!	ATCATTTTACACGCAGGCAT+TGG	-	chr5.4:18906686-18906705	MS.gene98461:CDS	40.0%
!	CAAAGACTTATCTGGAGCAT+CGG	+	chr5.4:18907015-18907034	None:intergenic	40.0%
!	GACTTTTCACCTTTTCCATG+TGG	+	chr5.4:18906806-18906825	None:intergenic	40.0%
!	TGAGCTATCATTTTACACGC+AGG	-	chr5.4:18906680-18906699	MS.gene98461:CDS	40.0%
!	TGCTGACTATTACGCAGAAA+TGG	-	chr5.4:18906767-18906786	MS.gene98461:CDS	40.0%
!!	AAGTCTTTGAGCTTTGAGGA+TGG	-	chr5.4:18907026-18907045	MS.gene98461:CDS	40.0%
!!	ATGGAGGTGTCTTTGGTTAA+CGG	-	chr5.4:18906420-18906439	MS.gene98461:CDS	40.0%
!!!	GATTTTGGTGGGTTCAGTAA+GGG	-	chr5.4:18907236-18907255	MS.gene98461:CDS	40.0%
!!!	TGATTTTGGTGGGTTCAGTA+AGG	-	chr5.4:18907235-18907254	MS.gene98461:CDS	40.0%
	AGAAAGGGCCAAGCAGAAAA+AGG	-	chr5.4:18906926-18906945	MS.gene98461:CDS	45.0%
	AGACAATCTCTTTGCTTCCC+TGG	+	chr5.4:18906880-18906899	None:intergenic	45.0%
	AGGTAAGGCAAAGCAAGCTA+TGG	-	chr5.4:18907109-18907128	MS.gene98461:CDS	45.0%
	AGTCAGCAGGTCTCAAGAAA+GGG	+	chr5.4:18906755-18906774	None:intergenic	45.0%
	GCAAAGCAAGCTATGGGAAA+GGG	-	chr5.4:18907116-18907135	MS.gene98461:CDS	45.0%
	GGTAAGGCAAAGCAAGCTAT+GGG	-	chr5.4:18907110-18907129	MS.gene98461:CDS	45.0%
	GTCGGCTATTAGATGAGAAG+CGG	-	chr5.4:18906823-18906842	MS.gene98461:CDS	45.0%
	TAGTCAGCAGGTCTCAAGAA+AGG	+	chr5.4:18906756-18906775	None:intergenic	45.0%
	TGAAGAGAGAAGAAAGGCCA+GGG	-	chr5.4:18906860-18906879	MS.gene98461:CDS	45.0%
	TGCTTCCAATCCACATTCTC+AGG	+	chr5.4:18906600-18906619	None:intergenic	45.0%
!	CTTTGAGAAGCTTGAGTCGA+TGG	-	chr5.4:18906725-18906744	MS.gene98461:CDS	45.0%
!!	CATCGACTCAAGCTTCTCAA+AGG	+	chr5.4:18906727-18906746	None:intergenic	45.0%
!!!	ATTTTACACGCAGGCATTGG+AGG	-	chr5.4:18906689-18906708	MS.gene98461:CDS	45.0%
!!!	CCAAATTTGGTTTTGGAGGC+CGG	-	chr5.4:18907174-18907193	MS.gene98461:CDS	45.0%
!!!	TTTTACACGCAGGCATTGGA+GGG	-	chr5.4:18906690-18906709	MS.gene98461:CDS	45.0%
	AGATGAGAAGCGGAAGATGG+AGG	-	chr5.4:18906833-18906852	MS.gene98461:CDS	50.0%
	AGGAAGCAGAGACAACAGAG+TGG	-	chr5.4:18906975-18906994	MS.gene98461:CDS	50.0%
	CCGGCCTCCAAAACCAAATT+TGG	+	chr5.4:18907177-18907196	None:intergenic	50.0%
	CTGAAGAGAGAAGAAAGGCC+AGG	-	chr5.4:18906859-18906878	MS.gene98461:CDS	50.0%
	GGAAGCAGAGACAACAGAGT+GGG	-	chr5.4:18906976-18906995	MS.gene98461:CDS	50.0%
	GGAGGCTGAAGAGAGAAGAA+AGG	-	chr5.4:18906854-18906873	MS.gene98461:CDS	50.0%
	GGCAAAGCAAGCTATGGGAA+AGG	-	chr5.4:18907115-18907134	MS.gene98461:CDS	50.0%
	GGGAGATAGCCACATGGAAA+AGG	-	chr5.4:18906794-18906813	MS.gene98461:CDS	50.0%
	TCTGCTTCTTCGATCCCTTC+CGG	+	chr5.4:18907196-18907215	None:intergenic	50.0%
	TTCAGTAAGGGTTCTGCTGC+TGG	-	chr5.4:18907248-18907267	MS.gene98461:CDS	50.0%
!	CATAAGCTGGCCTGAGAATG+TGG	-	chr5.4:18906587-18906606	MS.gene98461:CDS	50.0%
!!	CAACAGAGTGGGTTTGCTGA+CGG	-	chr5.4:18906987-18907006	MS.gene98461:CDS	50.0%
!!!	ATTTGGTTTTGGAGGCCGGA+AGG	-	chr5.4:18907178-18907197	MS.gene98461:CDS	50.0%
!!!	TTTGGTTTTGGAGGCCGGAA+GGG	-	chr5.4:18907179-18907198	MS.gene98461:CDS	50.0%
	AGGAGATCGGTCAGGAGGTA+AGG	-	chr5.4:18907094-18907113	MS.gene98461:CDS	55.0%
	CCGATCTCCTGGAGATACTC+CGG	+	chr5.4:18907084-18907103	None:intergenic	55.0%
	CGATCTCCTGGAGATACTCC+GGG	+	chr5.4:18907083-18907102	None:intergenic	55.0%
	GGTGAAGGGAGATAGCCACA+TGG	-	chr5.4:18906788-18906807	MS.gene98461:CDS	55.0%
	GTATCTCCAGGAGATCGGTC+AGG	-	chr5.4:18907086-18907105	MS.gene98461:CDS	55.0%
	TGAGAAGCGGAAGATGGAGG+AGG	-	chr5.4:18906836-18906855	MS.gene98461:CDS	55.0%
	TTACCTCCTGACCGATCTCC+TGG	+	chr5.4:18907095-18907114	None:intergenic	55.0%
!	CCGGAGTATCTCCAGGAGAT+CGG	-	chr5.4:18907081-18907100	MS.gene98461:CDS	55.0%
!	GCTGGCCTGAGAATGTGGAT+TGG	-	chr5.4:18906592-18906611	MS.gene98461:CDS	55.0%
!	GGCATTGGAGGGAACTAGAC+AGG	-	chr5.4:18906701-18906720	MS.gene98461:CDS	55.0%
	TCTCCAGGAGATCGGTCAGG+AGG	-	chr5.4:18907089-18907108	MS.gene98461:CDS	60.0%
!	AAGAGGCCCGGAGTATCTCC+AGG	-	chr5.4:18907074-18907093	MS.gene98461:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.4	gene	18906420	18907292	18906420	ID=MS.gene98461
chr5.4	mRNA	18906420	18907292	18906420	ID=MS.gene98461.t1;Parent=MS.gene98461
chr5.4	exon	18906420	18907292	18906420	ID=MS.gene98461.t1.exon1;Parent=MS.gene98461.t1
chr5.4	CDS	18906420	18907292	18906420	ID=cds.MS.gene98461.t1;Parent=MS.gene98461.t1

Gene Sequence

>MS.gene98461

ATGGAGGTGTCTTTGGTTAACGGTGATCCAATGATTGACGGTGAAACTGAAGATTTGGATGAGGAAATGTCACCGTTTGAATCAGATTCAGAAGAAGATGTCAAATTAGCTGAACCATCTAAAACTGCAGTGAATAACAGAGATGCTATATTAGATAAACTAGGAGACATAAGCTGGCCTGAGAATGTGGATTGGAAGCACAAACTCTCCATTGATATTGATCAAGGGGAGGAAGTAGATGTGAACGATGACTTGGCACGTGAGCTATCATTTTACACGCAGGCATTGGAGGGAACTAGACAGGCCTTTGAGAAGCTTGAGTCGATGGGTCTCCCTTTCTTGAGACCTGCTGACTATTACGCAGAAATGGTGAAGGGAGATAGCCACATGGAAAAGGTGAAAAGTCGGCTATTAGATGAGAAGCGGAAGATGGAGGAGGCTGAAGAGAGAAGAAAGGCCAGGGAAGCAAAGAGATTGTCTAAAGAGGTTCAGTCACAGAAATTGAAAGAAAGGGCCAAGCAGAAAAAGGATGACATTGAATCTGTTAAGAAGTGGAGGAAGCAGAGACAACAGAGTGGGTTTGCTGACGGCGCCGATGCTCCAGATAAGTCTTTGAGCTTTGAGGATGGAAAAGTGTTCGAGAGATCAAAGAAAAAGAGGCCCGGAGTATCTCCAGGAGATCGGTCAGGAGGTAAGGCAAAGCAAGCTATGGGAAAGGGAAAGAAGCCGCAAAAGAAAAGAGATACTAAGAATGCCAAATTTGGTTTTGGAGGCCGGAAGGGATCGAAGAAGCAGAATACAGCTGAAACAACTAATGATTTTGGTGGGTTCAGTAAGGGTTCTGCTGCTGGAAATAAGAAGAGAAAGAGATAA

Protein sequence

>MS.gene98461.t1

MEVSLVNGDPMIDGETEDLDEEMSPFESDSEEDVKLAEPSKTAVNNRDAILDKLGDISWPENVDWKHKLSIDIDQGEEVDVNDDLARELSFYTQALEGTRQAFEKLESMGLPFLRPADYYAEMVKGDSHMEKVKSRLLDEKRKMEEAEERRKAREAKRLSKEVQSQKLKERAKQKKDDIESVKKWRKQRQQSGFADGADAPDKSLSFEDGKVFERSKKKRPGVSPGDRSGGKAKQAMGKGKKPQKKRDTKNAKFGFGGRKGSKKQNTAETTNDFGGFSKGSAAGNKKRKR