AlfalfaGEDB | MS.gene69611

M. sativa cultivar XinJiangDaYe / MS.gene69611

KEGG: K14823
GO: -
PFAM: PF05890.15

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene69611.t1	XP_003612737.2	97.9	289	6	0	1	289	1	289	6.90E-107	397.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene69611.t1	Q9LUJ5	56.2	258	106	4	35	290	41	293	7.1e-44	179.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene69611.t1	G7KAW7	97.9	289	6	0	1	289	1	289	5.0e-107	397.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050945	MS.gene69611	0.811495	6.81E-51	-1.69E-46
MS.gene051003	MS.gene69611	0.821277	4.40E-53	-1.69E-46
MS.gene051234	MS.gene69611	0.811189	7.93E-51	-1.69E-46
MS.gene051748	MS.gene69611	0.800057	1.72E-48	-1.69E-46
MS.gene05188	MS.gene69611	0.872175	3.89E-67	-1.69E-46
MS.gene051903	MS.gene69611	0.834415	3.04E-56	-1.69E-46
MS.gene051975	MS.gene69611	0.853478	2.33E-61	-1.69E-46
MS.gene052947	MS.gene69611	0.821228	4.51E-53	-1.69E-46
MS.gene053058	MS.gene69611	0.847977	8.22E-60	-1.69E-46
MS.gene053952	MS.gene69611	0.801454	8.94E-49	-1.69E-46
MS.gene053963	MS.gene69611	0.808773	2.63E-50	-1.69E-46
MS.gene054328	MS.gene69611	0.809616	1.73E-50	-1.69E-46
MS.gene055603	MS.gene69611	0.806143	9.49E-50	-1.69E-46
MS.gene055808	MS.gene69611	0.814403	1.57E-51	-1.69E-46
MS.gene056091	MS.gene69611	0.834611	2.71E-56	-1.69E-46
MS.gene056403	MS.gene69611	0.899799	1.38E-77	-1.69E-46
MS.gene056605	MS.gene69611	0.905257	5.20E-80	-1.69E-46
MS.gene056631	MS.gene69611	0.819335	1.23E-52	-1.69E-46
MS.gene05689	MS.gene69611	0.867804	1.04E-65	-1.69E-46
MS.gene056986	MS.gene69611	0.866696	2.36E-65	-1.69E-46
MS.gene057094	MS.gene69611	0.840283	9.54E-58	-1.69E-46
MS.gene05781	MS.gene69611	0.84731	1.25E-59	-1.69E-46
MS.gene057999	MS.gene69611	0.824545	7.62E-54	-1.69E-46
MS.gene059146	MS.gene69611	0.854174	1.47E-61	-1.69E-46
MS.gene05985	MS.gene69611	-0.814458	1.52E-51	-1.69E-46
MS.gene059901	MS.gene69611	-0.870541	1.35E-66	-1.69E-46
MS.gene059935	MS.gene69611	0.84606	2.75E-59	-1.69E-46
MS.gene06001	MS.gene69611	0.824617	7.33E-54	-1.69E-46
MS.gene06011	MS.gene69611	0.893017	9.29E-75	-1.69E-46
MS.gene060429	MS.gene69611	0.816189	6.29E-52	-1.69E-46
MS.gene060586	MS.gene69611	0.809715	1.65E-50	-1.69E-46
MS.gene060763	MS.gene69611	0.886419	3.48E-72	-1.69E-46
MS.gene060830	MS.gene69611	0.914949	1.05E-84	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene45646	MS.gene69611	PPI
MS.gene31515	MS.gene69611	PPI
MS.gene059878	MS.gene69611	PPI
MS.gene59369	MS.gene69611	PPI
MS.gene69611	MS.gene64512	PPI
MS.gene69611	MS.gene034931	PPI
MS.gene69611	MS.gene002038	PPI
MS.gene69611	MS.gene071916	PPI
MS.gene039132	MS.gene69611	PPI
MS.gene040601	MS.gene69611	PPI
MS.gene69611	MS.gene060923	PPI
MS.gene031378	MS.gene69611	PPI
MS.gene058018	MS.gene69611	PPI
MS.gene003435	MS.gene69611	PPI
MS.gene57660	MS.gene69611	PPI
MS.gene69611	MS.gene77667	PPI
MS.gene69611	MS.gene99779	PPI
MS.gene69611	MS.gene072064	PPI
MS.gene065652	MS.gene69611	PPI
MS.gene073150	MS.gene69611	PPI
MS.gene69611	MS.gene29719	PPI
MS.gene51111	MS.gene69611	PPI
MS.gene073324	MS.gene69611	PPI
MS.gene69611	MS.gene047206	PPI
MS.gene012331	MS.gene69611	PPI
MS.gene063385	MS.gene69611	PPI
MS.gene52150	MS.gene69611	PPI
MS.gene94588	MS.gene69611	PPI
MS.gene96312	MS.gene69611	PPI
MS.gene061905	MS.gene69611	PPI
MS.gene020215	MS.gene69611	PPI
MS.gene69611	MS.gene01172	PPI
MS.gene69611	MS.gene00612	PPI
MS.gene047421	MS.gene69611	PPI
MS.gene69611	MS.gene046040	PPI
MS.gene69611	MS.gene000480	PPI
MS.gene98889	MS.gene69611	PPI
MS.gene059880	MS.gene69611	PPI
MS.gene69611	MS.gene90360	PPI
MS.gene94183	MS.gene69611	PPI
MS.gene064180	MS.gene69611	PPI
MS.gene91244	MS.gene69611	PPI
MS.gene69611	MS.gene022752	PPI
MS.gene95758	MS.gene69611	PPI
MS.gene95644	MS.gene69611	PPI
MS.gene69611	MS.gene47347	PPI
MS.gene69611	MS.gene77392	PPI
MS.gene69611	MS.gene45344	PPI
MS.gene92970	MS.gene69611	PPI
MS.gene012333	MS.gene69611	PPI
MS.gene09845	MS.gene69611	PPI
MS.gene69611	MS.gene002204	PPI
MS.gene018553	MS.gene69611	PPI
MS.gene029547	MS.gene69611	PPI
MS.gene39294	MS.gene69611	PPI
MS.gene069038	MS.gene69611	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene69611.t1	MTR_5g028350	97.232	289	8	0	1	289	1	289	0.0	568
MS.gene69611.t1	MTR_8g075400	76.552	290	37	4	1	289	14	273	2.26e-139	394
MS.gene69611.t1	MTR_8g075400	87.500	224	26	1	1	224	1	222	6.17e-130	369

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene69611.t1	AT3G22660	65.529	293	86	6	2	290	12	293	3.65e-126	361

Find 71 sgRNAs with CRISPR-Local

Find 89 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCGGCCTCCAAAACCAAATT+TGG	0.189093	5.3:+17537866	None:intergenic
GCTGAAACAACTAATGATTT+TGG	0.204488	5.3:-17537819	MS.gene69611:CDS
GATACTAAGAATGCCAAATT+TGG	0.209577	5.3:-17537879	MS.gene69611:CDS
AAGAATGCCAAATTTGGTTT+TGG	0.274042	5.3:-17537873	MS.gene69611:CDS
ATGGAGGTGCCTTTGATTAA+TGG	0.295822	5.3:-17538620	MS.gene69611:CDS
TCAAAGCTCAAAGACTTATC+TGG	0.326167	5.3:+17538020	None:intergenic
AGAAAGGGCCAAGCAGAAAA+AGG	0.351345	5.3:-17538114	MS.gene69611:CDS
TCAGTTTCACCGTCAATCAT+TGG	0.370634	5.3:+17538593	None:intergenic
TCTGCTTCTTCGATCCCTTC+CGG	0.371874	5.3:+17537847	None:intergenic
TGCTTCCAATCCACATTCTC+AGG	0.372391	5.3:+17538443	None:intergenic
TGACGGTGAAACTGAAGATT+TGG	0.372926	5.3:-17538585	MS.gene69611:CDS
TTCAGTAAGGGTTCTGCTGC+TGG	0.381325	5.3:-17537792	MS.gene69611:CDS
TTACCTCCTGACCGATCTCC+TGG	0.396701	5.3:+17537948	None:intergenic
AGACAATCTCTTTGCTTCCC+TGG	0.401049	5.3:+17538163	None:intergenic
AGATAAGTCTTTGAGCTTTG+AGG	0.404345	5.3:-17538018	MS.gene69611:CDS
CTGAAGAGAGAAGAAAGGCC+AGG	0.422247	5.3:-17538181	MS.gene69611:CDS
CTCTCCATTGATATTGATCA+AGG	0.429280	5.3:-17538416	MS.gene69611:CDS
TCTTCTGAATCTGATTCAAA+TGG	0.456186	5.3:+17538548	None:intergenic
AGTCACAGAAATTGAAAGAA+AGG	0.458750	5.3:-17538130	MS.gene69611:CDS
TAGTCAGCAGGTCTCAAGAA+AGG	0.478435	5.3:+17538287	None:intergenic
CTTTGAGAAGCTTGAGTCGA+TGG	0.481104	5.3:-17538315	MS.gene69611:CDS
TGCTGACTATTACGCAGAAA+TGG	0.488469	5.3:-17538273	MS.gene69611:CDS
CTCCCCTTGATCAATATCAA+TGG	0.492911	5.3:+17538412	None:intergenic
CCGATCTCCTGGAGATACTC+CGG	0.494759	5.3:+17537959	None:intergenic
AGGAGATCGGTCAGGAGGTA+AGG	0.497659	5.3:-17537946	MS.gene69611:CDS
AGTCTTTGAGCTTTGAGGAT+GGG	0.501140	5.3:-17538013	MS.gene69611:CDS
AGTCAGCAGGTCTCAAGAAA+GGG	0.501463	5.3:+17538288	None:intergenic
GGGAGATAGCCACATGGAAA+AGG	0.502899	5.3:-17538246	MS.gene69611:CDS
CATAAGCTGGCCTGAGAATG+TGG	0.503617	5.3:-17538453	MS.gene69611:CDS
GTCACAGAAATTGAAAGAAA+GGG	0.504083	5.3:-17538129	MS.gene69611:CDS
GCAAAGCAAGCTATGGGAAA+GGG	0.507585	5.3:-17537924	MS.gene69611:CDS
ATTAGATGAGAAGCGGAAGA+TGG	0.510158	5.3:-17538210	MS.gene69611:CDS
GGCATTGGAGGGAACTAGAC+AGG	0.514311	5.3:-17538339	MS.gene69611:CDS
AGGTAAGGCAAAGCAAGCTA+TGG	0.517763	5.3:-17537931	MS.gene69611:CDS
TTTGAGAAGCTTGAGTCGAT+GGG	0.525398	5.3:-17538314	MS.gene69611:CDS
GGAGGCTGAAGAGAGAAGAA+AGG	0.530598	5.3:-17538186	MS.gene69611:CDS
CAAAGACTTATCTGGAGCAT+CGG	0.536868	5.3:+17538028	None:intergenic
AGATGAGAAGCGGAAGATGG+AGG	0.539024	5.3:-17538207	MS.gene69611:CDS
GATGCTATATTAGATAAACT+TGG	0.546950	5.3:-17538479	MS.gene69611:CDS
AGCAAAGAGATTGTCTAAAG+AGG	0.557828	5.3:-17538156	MS.gene69611:CDS
AAGAGGCCCGGAGTATCTCC+AGG	0.558097	5.3:-17537966	MS.gene69611:CDS
CTCCATTGATATTGATCAAG+GGG	0.559298	5.3:-17538414	MS.gene69611:CDS
GTATCTCCAGGAGATCGGTC+AGG	0.562327	5.3:-17537954	MS.gene69611:CDS
CGATCTCCTGGAGATACTCC+GGG	0.563080	5.3:+17537960	None:intergenic
AGTAGATGTGAACGATGACT+TGG	0.565329	5.3:-17538387	MS.gene69611:CDS
ATTTCTGCGTAATAGTCAGC+AGG	0.568461	5.3:+17538275	None:intergenic
ATAAACTTGGAGACATAAGC+TGG	0.571619	5.3:-17538466	MS.gene69611:CDS
TGAAACTGAAGATTTGGATG+AGG	0.572001	5.3:-17538579	MS.gene69611:CDS
CCGGAGTATCTCCAGGAGAT+CGG	0.576336	5.3:-17537959	MS.gene69611:CDS
AAGTCTTTGAGCTTTGAGGA+TGG	0.577328	5.3:-17538014	MS.gene69611:CDS
TGAAGAGAGAAGAAAGGCCA+GGG	0.579670	5.3:-17538180	MS.gene69611:CDS
CATCGACTCAAGCTTCTCAA+AGG	0.582387	5.3:+17538316	None:intergenic
GGCAAAGCAAGCTATGGGAA+AGG	0.584114	5.3:-17537925	MS.gene69611:CDS
ATTGGATCACCATTAATCAA+AGG	0.591452	5.3:+17538611	None:intergenic
TCTCCATTGATATTGATCAA+GGG	0.594778	5.3:-17538415	MS.gene69611:CDS
AATGGTGATCCAATGATTGA+CGG	0.595326	5.3:-17538602	MS.gene69611:CDS
GGTAAGGCAAAGCAAGCTAT+GGG	0.598074	5.3:-17537930	MS.gene69611:CDS
GGAAGCAGAGACAACAGAGT+GGG	0.599709	5.3:-17538064	MS.gene69611:CDS
ACATTGAATCTGTTAAGAAG+TGG	0.600860	5.3:-17538088	MS.gene69611:CDS
TGAGAAGCGGAAGATGGAGG+AGG	0.603783	5.3:-17538204	MS.gene69611:CDS
TTGAATCTGTTAAGAAGTGG+AGG	0.608378	5.3:-17538085	MS.gene69611:CDS
CTATTACGCAGAAATGGTGA+AGG	0.608653	5.3:-17538267	MS.gene69611:CDS
GTCGGCTATTAGATGAGAAG+CGG	0.609331	5.3:-17538217	MS.gene69611:CDS
GCTGGCCTGAGAATGTGGAT+TGG	0.611875	5.3:-17538448	MS.gene69611:CDS
ACATGGAAAAGGTGAAAAGT+CGG	0.619320	5.3:-17538235	MS.gene69611:CDS
CAACAGAGTGGGTTTGCTGA+CGG	0.625190	5.3:-17538053	MS.gene69611:CDS
AGGAAGCAGAGACAACAGAG+TGG	0.651328	5.3:-17538065	MS.gene69611:CDS
CATTGATATTGATCAAGGGG+AGG	0.657330	5.3:-17538411	MS.gene69611:CDS
TCTCCAGGAGATCGGTCAGG+AGG	0.664692	5.3:-17537951	MS.gene69611:CDS
TATTACGCAGAAATGGTGAA+GGG	0.681147	5.3:-17538266	MS.gene69611:CDS
GGTGAAGGGAGATAGCCACA+TGG	0.757517	5.3:-17538252	MS.gene69611:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	GATGCTATATTAGATAAACT+TGG	-	chr5.3:17537911-17537930	MS.gene69611:CDS	25.0%
!!	TTAGTATCTCTTTTCTTTTG+CGG	+	chr5.3:17538499-17538518	None:intergenic	25.0%
	ACATTGAATCTGTTAAGAAG+TGG	-	chr5.3:17538302-17538321	MS.gene69611:CDS	30.0%
	AGTCACAGAAATTGAAAGAA+AGG	-	chr5.3:17538260-17538279	MS.gene69611:CDS	30.0%
	ATTGGATCACCATTAATCAA+AGG	+	chr5.3:17537782-17537801	None:intergenic	30.0%
	GATACTAAGAATGCCAAATT+TGG	-	chr5.3:17538511-17538530	MS.gene69611:CDS	30.0%
	GTCACAGAAATTGAAAGAAA+GGG	-	chr5.3:17538261-17538280	MS.gene69611:CDS	30.0%
	TCTCCATTGATATTGATCAA+GGG	-	chr5.3:17537975-17537994	MS.gene69611:CDS	30.0%
	TCTTCTGAATCTGATTCAAA+TGG	+	chr5.3:17537845-17537864	None:intergenic	30.0%
!	GAAACAACTAATGATTTTGG+CGG	-	chr5.3:17538574-17538593	MS.gene69611:CDS	30.0%
!	GCTGAAACAACTAATGATTT+TGG	-	chr5.3:17538571-17538590	MS.gene69611:CDS	30.0%
!!	AAACAACTAATGATTTTGGC+GGG	-	chr5.3:17538575-17538594	MS.gene69611:CDS	30.0%
!!	AAGAATGCCAAATTTGGTTT+TGG	-	chr5.3:17538517-17538536	MS.gene69611:CDS	30.0%
!!!	TTATTCACTGCAGTTTTAGA+TGG	+	chr5.3:17537887-17537906	None:intergenic	30.0%
	AATGGTGATCCAATGATTGA+CGG	-	chr5.3:17537788-17537807	MS.gene69611:CDS	35.0%
	ACATGGAAAAGGTGAAAAGT+CGG	-	chr5.3:17538155-17538174	MS.gene69611:CDS	35.0%
	AGATAAGTCTTTGAGCTTTG+AGG	-	chr5.3:17538372-17538391	MS.gene69611:CDS	35.0%
	AGCAAAGAGATTGTCTAAAG+AGG	-	chr5.3:17538234-17538253	MS.gene69611:CDS	35.0%
	ATAAACTTGGAGACATAAGC+TGG	-	chr5.3:17537924-17537943	MS.gene69611:CDS	35.0%
	CTCCATTGATATTGATCAAG+GGG	-	chr5.3:17537976-17537995	MS.gene69611:CDS	35.0%
	CTCTCCATTGATATTGATCA+AGG	-	chr5.3:17537974-17537993	MS.gene69611:CDS	35.0%
	TATTACGCAGAAATGGTGAA+GGG	-	chr5.3:17538124-17538143	MS.gene69611:CDS	35.0%
	TCAAAGCTCAAAGACTTATC+TGG	+	chr5.3:17538373-17538392	None:intergenic	35.0%
	TCGAGAGATCAAAGAAAAAG+AGG	-	chr5.3:17538407-17538426	MS.gene69611:CDS	35.0%
	TGAAACTGAAGATTTGGATG+AGG	-	chr5.3:17537811-17537830	MS.gene69611:CDS	35.0%
	TTGAATCTGTTAAGAAGTGG+AGG	-	chr5.3:17538305-17538324	MS.gene69611:CDS	35.0%
!	AATGTCATCCTTTTTCTGCT+TGG	+	chr5.3:17538287-17538306	None:intergenic	35.0%
!!!	AATGCCAAATTTGGTTTTGG+AGG	-	chr5.3:17538520-17538539	MS.gene69611:CDS	35.0%
	AGATCAAAGAAAAAGAGGCC+CGG	-	chr5.3:17538412-17538431	MS.gene69611:CDS	40.0%
	AGTAGATGTGAACGATGACT+TGG	-	chr5.3:17538003-17538022	MS.gene69611:CDS	40.0%
	ATTAGATGAGAAGCGGAAGA+TGG	-	chr5.3:17538180-17538199	MS.gene69611:CDS	40.0%
	ATTTCTGCGTAATAGTCAGC+AGG	+	chr5.3:17538118-17538137	None:intergenic	40.0%
	CATTGATATTGATCAAGGGG+AGG	-	chr5.3:17537979-17537998	MS.gene69611:CDS	40.0%
	CTATTACGCAGAAATGGTGA+AGG	-	chr5.3:17538123-17538142	MS.gene69611:CDS	40.0%
	CTCCCCTTGATCAATATCAA+TGG	+	chr5.3:17537981-17538000	None:intergenic	40.0%
	TCAGTTTCACCGTCAATCAT+TGG	+	chr5.3:17537800-17537819	None:intergenic	40.0%
	TGACGGTGAAACTGAAGATT+TGG	-	chr5.3:17537805-17537824	MS.gene69611:CDS	40.0%
	TTTGAGAAGCTTGAGTCGAT+GGG	-	chr5.3:17538076-17538095	MS.gene69611:CDS	40.0%
!	ATCATTTTACACGCAGGCAT+TGG	-	chr5.3:17538036-17538055	MS.gene69611:CDS	40.0%
!	CAAAGACTTATCTGGAGCAT+CGG	+	chr5.3:17538365-17538384	None:intergenic	40.0%
!	GACTTTTCACCTTTTCCATG+TGG	+	chr5.3:17538156-17538175	None:intergenic	40.0%
!	TGAGCTATCATTTTACACGC+AGG	-	chr5.3:17538030-17538049	MS.gene69611:CDS	40.0%
!	TGCTGACTATTACGCAGAAA+TGG	-	chr5.3:17538117-17538136	MS.gene69611:CDS	40.0%
!!	AAGTCTTTGAGCTTTGAGGA+TGG	-	chr5.3:17538376-17538395	MS.gene69611:CDS	40.0%
!!	AGTCTTTGAGCTTTGAGGAT+GGG	-	chr5.3:17538377-17538396	MS.gene69611:CDS	40.0%
!!	ATGGAGGTGCCTTTGATTAA+TGG	-	chr5.3:17537770-17537789	MS.gene69611:CDS	40.0%
	AGAAAGGGCCAAGCAGAAAA+AGG	-	chr5.3:17538276-17538295	MS.gene69611:CDS	45.0%
	AGACAATCTCTTTGCTTCCC+TGG	+	chr5.3:17538230-17538249	None:intergenic	45.0%
	AGGTAAGGCAAAGCAAGCTA+TGG	-	chr5.3:17538459-17538478	MS.gene69611:CDS	45.0%
	AGTCAGCAGGTCTCAAGAAA+GGG	+	chr5.3:17538105-17538124	None:intergenic	45.0%
	GCAAAGCAAGCTATGGGAAA+GGG	-	chr5.3:17538466-17538485	MS.gene69611:CDS	45.0%
	GGTAAGGCAAAGCAAGCTAT+GGG	-	chr5.3:17538460-17538479	MS.gene69611:CDS	45.0%
	GTCGGCTATTAGATGAGAAG+CGG	-	chr5.3:17538173-17538192	MS.gene69611:CDS	45.0%
	TAGTCAGCAGGTCTCAAGAA+AGG	+	chr5.3:17538106-17538125	None:intergenic	45.0%
	TGAAGAGAGAAGAAAGGCCA+GGG	-	chr5.3:17538210-17538229	MS.gene69611:CDS	45.0%
	TGCTTCCAATCCACATTCTC+AGG	+	chr5.3:17537950-17537969	None:intergenic	45.0%
!	CTTTGAGAAGCTTGAGTCGA+TGG	-	chr5.3:17538075-17538094	MS.gene69611:CDS	45.0%
!!	CATCGACTCAAGCTTCTCAA+AGG	+	chr5.3:17538077-17538096	None:intergenic	45.0%
!!!	ATTTTACACGCAGGCATTGG+AGG	-	chr5.3:17538039-17538058	MS.gene69611:CDS	45.0%
!!!	CCAAATTTGGTTTTGGAGGC+CGG	-	chr5.3:17538524-17538543	MS.gene69611:CDS	45.0%
!!!	GATTTTGGCGGGTTCAGTAA+GGG	-	chr5.3:17538586-17538605	MS.gene69611:CDS	45.0%
!!!	TGATTTTGGCGGGTTCAGTA+AGG	-	chr5.3:17538585-17538604	MS.gene69611:CDS	45.0%
!!!	TTTTACACGCAGGCATTGGA+GGG	-	chr5.3:17538040-17538059	MS.gene69611:CDS	45.0%
	AGATGAGAAGCGGAAGATGG+AGG	-	chr5.3:17538183-17538202	MS.gene69611:CDS	50.0%
	AGGAAGCAGAGACAACAGAG+TGG	-	chr5.3:17538325-17538344	MS.gene69611:CDS	50.0%
	CCGGCCTCCAAAACCAAATT+TGG	+	chr5.3:17538527-17538546	None:intergenic	50.0%
	CTGAAGAGAGAAGAAAGGCC+AGG	-	chr5.3:17538209-17538228	MS.gene69611:CDS	50.0%
	GGAAGCAGAGACAACAGAGT+GGG	-	chr5.3:17538326-17538345	MS.gene69611:CDS	50.0%
	GGAGGCTGAAGAGAGAAGAA+AGG	-	chr5.3:17538204-17538223	MS.gene69611:CDS	50.0%
	GGCAAAGCAAGCTATGGGAA+AGG	-	chr5.3:17538465-17538484	MS.gene69611:CDS	50.0%
	GGGAGATAGCCACATGGAAA+AGG	-	chr5.3:17538144-17538163	MS.gene69611:CDS	50.0%
	TCTGCTTCTTCGATCCCTTC+CGG	+	chr5.3:17538546-17538565	None:intergenic	50.0%
	TTCAGTAAGGGTTCTGCTGC+TGG	-	chr5.3:17538598-17538617	MS.gene69611:CDS	50.0%
!	CATAAGCTGGCCTGAGAATG+TGG	-	chr5.3:17537937-17537956	MS.gene69611:CDS	50.0%
!!	CAACAGAGTGGGTTTGCTGA+CGG	-	chr5.3:17538337-17538356	MS.gene69611:CDS	50.0%
!!!	ATTTGGTTTTGGAGGCCGGA+AGG	-	chr5.3:17538528-17538547	MS.gene69611:CDS	50.0%
!!!	TTTGGTTTTGGAGGCCGGAA+GGG	-	chr5.3:17538529-17538548	MS.gene69611:CDS	50.0%
	AGGAGATCGGTCAGGAGGTA+AGG	-	chr5.3:17538444-17538463	MS.gene69611:CDS	55.0%
	CCGATCTCCTGGAGATACTC+CGG	+	chr5.3:17538434-17538453	None:intergenic	55.0%
	CGATCTCCTGGAGATACTCC+GGG	+	chr5.3:17538433-17538452	None:intergenic	55.0%
	GGTGAAGGGAGATAGCCACA+TGG	-	chr5.3:17538138-17538157	MS.gene69611:CDS	55.0%
	GTATCTCCAGGAGATCGGTC+AGG	-	chr5.3:17538436-17538455	MS.gene69611:CDS	55.0%
	TGAGAAGCGGAAGATGGAGG+AGG	-	chr5.3:17538186-17538205	MS.gene69611:CDS	55.0%
	TTACCTCCTGACCGATCTCC+TGG	+	chr5.3:17538445-17538464	None:intergenic	55.0%
!	CCGGAGTATCTCCAGGAGAT+CGG	-	chr5.3:17538431-17538450	MS.gene69611:CDS	55.0%
!	GCTGGCCTGAGAATGTGGAT+TGG	-	chr5.3:17537942-17537961	MS.gene69611:CDS	55.0%
!	GGCATTGGAGGGAACTAGAC+AGG	-	chr5.3:17538051-17538070	MS.gene69611:CDS	55.0%
	TCTCCAGGAGATCGGTCAGG+AGG	-	chr5.3:17538439-17538458	MS.gene69611:CDS	60.0%
!	AAGAGGCCCGGAGTATCTCC+AGG	-	chr5.3:17538424-17538443	MS.gene69611:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.3	gene	17537770	17538642	17537770	ID=MS.gene69611
chr5.3	mRNA	17537770	17538642	17537770	ID=MS.gene69611.t1;Parent=MS.gene69611
chr5.3	exon	17537770	17538642	17537770	ID=MS.gene69611.t1.exon1;Parent=MS.gene69611.t1
chr5.3	CDS	17537770	17538642	17537770	ID=cds.MS.gene69611.t1;Parent=MS.gene69611.t1

Gene Sequence

>MS.gene69611

ATGGAGGTGCCTTTGATTAATGGTGATCCAATGATTGACGGTGAAACTGAAGATTTGGATGAGGAAATGTCACCATTTGAATCAGATTCAGAAGAAGATGTCAAATTAGCTGAACCATCTAAAACTGCAGTGAATAACAGAGATGCTATATTAGATAAACTTGGAGACATAAGCTGGCCTGAGAATGTGGATTGGAAGCACAAACTCTCCATTGATATTGATCAAGGGGAGGAAGTAGATGTGAACGATGACTTGGCACGTGAGCTATCATTTTACACGCAGGCATTGGAGGGAACTAGACAGGCCTTTGAGAAGCTTGAGTCGATGGGTCTCCCTTTCTTGAGACCTGCTGACTATTACGCAGAAATGGTGAAGGGAGATAGCCACATGGAAAAGGTGAAAAGTCGGCTATTAGATGAGAAGCGGAAGATGGAGGAGGCTGAAGAGAGAAGAAAGGCCAGGGAAGCAAAGAGATTGTCTAAAGAGGTTCAGTCACAGAAATTGAAAGAAAGGGCCAAGCAGAAAAAGGATGACATTGAATCTGTTAAGAAGTGGAGGAAGCAGAGACAACAGAGTGGGTTTGCTGACGGCGCCGATGCTCCAGATAAGTCTTTGAGCTTTGAGGATGGGAAAGTGTTCGAGAGATCAAAGAAAAAGAGGCCCGGAGTATCTCCAGGAGATCGGTCAGGAGGTAAGGCAAAGCAAGCTATGGGAAAGGGAAAGAAGCCGCAAAAGAAAAGAGATACTAAGAATGCCAAATTTGGTTTTGGAGGCCGGAAGGGATCGAAGAAGCAGAATACAGCTGAAACAACTAATGATTTTGGCGGGTTCAGTAAGGGTTCTGCTGCTGGAAATAAGAAGAGAAAGAGATAA

Protein sequence

>MS.gene69611.t1

MEVPLINGDPMIDGETEDLDEEMSPFESDSEEDVKLAEPSKTAVNNRDAILDKLGDISWPENVDWKHKLSIDIDQGEEVDVNDDLARELSFYTQALEGTRQAFEKLESMGLPFLRPADYYAEMVKGDSHMEKVKSRLLDEKRKMEEAEERRKAREAKRLSKEVQSQKLKERAKQKKDDIESVKKWRKQRQQSGFADGADAPDKSLSFEDGKVFERSKKKRPGVSPGDRSGGKAKQAMGKGKKPQKKRDTKNAKFGFGGRKGSKKQNTAETTNDFGGFSKGSAAGNKKRKR