AlfalfaGEDB | MS.gene89671

M. sativa cultivar XinJiangDaYe / MS.gene89671

KEGG: K14823
GO: -
PFAM: PF05890.15

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene89671.t1	XP_013446346.2	86.8	288	38	0	1	288	1	288	6.00E-95	357.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene89671.t1	Q9LUJ5	62.3	207	77	1	35	240	41	247	2.1e-40	167.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene89671.t1	A0A396GLQ3	86.8	288	38	0	1	288	1	288	4.3e-95	357.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049159	MS.gene89671	0.8158	7.68E-52	-1.69E-46
MS.gene049341	MS.gene89671	0.827442	1.56E-54	-1.69E-46
MS.gene049501	MS.gene89671	0.821643	3.62E-53	-1.69E-46
MS.gene049821	MS.gene89671	0.813537	2.43E-51	-1.69E-46
MS.gene049850	MS.gene89671	0.80437	2.23E-49	-1.69E-46
MS.gene050020	MS.gene89671	0.8285	8.68E-55	-1.69E-46
MS.gene050303	MS.gene89671	0.807615	4.64E-50	-1.69E-46
MS.gene050438	MS.gene89671	0.804033	2.62E-49	-1.69E-46
MS.gene050586	MS.gene89671	0.823592	1.27E-53	-1.69E-46
MS.gene050719	MS.gene89671	0.805604	1.23E-49	-1.69E-46
MS.gene050721	MS.gene89671	0.804486	2.11E-49	-1.69E-46
MS.gene050807	MS.gene89671	0.834062	3.72E-56	-1.69E-46
MS.gene050808	MS.gene89671	0.803469	3.44E-49	-1.69E-46
MS.gene050815	MS.gene89671	0.8473	1.26E-59	-1.69E-46
MS.gene051247	MS.gene89671	0.811722	6.07E-51	-1.69E-46
MS.gene051265	MS.gene89671	0.813434	2.56E-51	-1.69E-46
MS.gene051328	MS.gene89671	0.833598	4.87E-56	-1.69E-46
MS.gene051388	MS.gene89671	0.812699	3.72E-51	-1.69E-46
MS.gene05157	MS.gene89671	0.801614	8.29E-49	-1.69E-46
MS.gene051719	MS.gene89671	0.822959	1.79E-53	-1.69E-46
MS.gene051720	MS.gene89671	0.813107	3.03E-51	-1.69E-46
MS.gene052020	MS.gene89671	0.830104	3.54E-55	-1.69E-46
MS.gene052323	MS.gene89671	0.80221	6.25E-49	-1.69E-46
MS.gene052561	MS.gene89671	0.8222	2.69E-53	-1.69E-46
MS.gene052584	MS.gene89671	0.800711	1.27E-48	-1.69E-46
MS.gene052665	MS.gene89671	0.836674	8.15E-57	-1.69E-46
MS.gene052863	MS.gene89671	0.81342	2.58E-51	-1.69E-46
MS.gene052896	MS.gene89671	0.843115	1.71E-58	-1.69E-46
MS.gene053074	MS.gene89671	0.81303	3.15E-51	-1.69E-46
MS.gene053221	MS.gene89671	0.800365	1.49E-48	-1.69E-46
MS.gene053226	MS.gene89671	0.80739	5.17E-50	-1.69E-46
MS.gene053630	MS.gene89671	0.820794	5.68E-53	-1.69E-46
MS.gene053883	MS.gene89671	0.808542	2.94E-50	-1.69E-46
MS.gene055465	MS.gene89671	0.819682	1.02E-52	-1.69E-46
MS.gene055466	MS.gene89671	0.847846	8.93E-60	-1.69E-46
MS.gene055468	MS.gene89671	0.833029	6.74E-56	-1.69E-46
MS.gene055512	MS.gene89671	0.811557	6.60E-51	-1.69E-46
MS.gene055580	MS.gene89671	-0.808157	3.56E-50	-1.69E-46
MS.gene055608	MS.gene89671	0.830452	2.91E-55	-1.69E-46
MS.gene055778	MS.gene89671	0.811743	6.01E-51	-1.69E-46
MS.gene056173	MS.gene89671	0.807964	3.91E-50	-1.69E-46
MS.gene056215	MS.gene89671	0.80214	6.46E-49	-1.69E-46
MS.gene056553	MS.gene89671	0.801227	9.95E-49	-1.69E-46
MS.gene057060	MS.gene89671	0.810756	9.84E-51	-1.69E-46
MS.gene057314	MS.gene89671	0.813425	2.58E-51	-1.69E-46
MS.gene057693	MS.gene89671	0.821454	4.00E-53	-1.69E-46
MS.gene057869	MS.gene89671	0.800172	1.63E-48	-1.69E-46
MS.gene058168	MS.gene89671	0.823589	1.28E-53	-1.69E-46
MS.gene058636	MS.gene89671	0.81351	2.47E-51	-1.69E-46
MS.gene058906	MS.gene89671	0.810122	1.35E-50	-1.69E-46
MS.gene05954	MS.gene89671	0.805964	1.03E-49	-1.69E-46
MS.gene059725	MS.gene89671	0.800096	1.69E-48	-1.69E-46
MS.gene059937	MS.gene89671	0.826173	3.14E-54	-1.69E-46
MS.gene06001	MS.gene89671	0.801532	8.61E-49	-1.69E-46
MS.gene060137	MS.gene89671	-0.815385	9.50E-52	-1.69E-46
MS.gene060429	MS.gene89671	0.838615	2.59E-57	-1.69E-46
MS.gene060470	MS.gene89671	0.810871	9.29E-51	-1.69E-46
MS.gene060587	MS.gene89671	0.809113	2.22E-50	-1.69E-46
MS.gene060803	MS.gene89671	0.825359	4.89E-54	-1.69E-46
MS.gene06114	MS.gene89671	0.802223	6.21E-49	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene89671	MS.gene073324	PPI
MS.gene89671	MS.gene77667	PPI
MS.gene89671	MS.gene64512	PPI
MS.gene89671	MS.gene91244	PPI
MS.gene89671	MS.gene002038	PPI
MS.gene89671	MS.gene071916	PPI
MS.gene89671	MS.gene012331	PPI
MS.gene89671	MS.gene020215	PPI
MS.gene89671	MS.gene060923	PPI
MS.gene89671	MS.gene92970	PPI
MS.gene89671	MS.gene059880	PPI
MS.gene89671	MS.gene063385	PPI
MS.gene89671	MS.gene003435	PPI
MS.gene89671	MS.gene52150	PPI
MS.gene89671	MS.gene99779	PPI
MS.gene89671	MS.gene072064	PPI
MS.gene89671	MS.gene96312	PPI
MS.gene89671	MS.gene018553	PPI
MS.gene89671	MS.gene047421	PPI
MS.gene89671	MS.gene29719	PPI
MS.gene89671	MS.gene061905	PPI
MS.gene89671	MS.gene94183	PPI
MS.gene89671	MS.gene047206	PPI
MS.gene89671	MS.gene031378	PPI
MS.gene89671	MS.gene058018	PPI
MS.gene89671	MS.gene57660	PPI
MS.gene069038	MS.gene89671	PPI
MS.gene89671	MS.gene040601	PPI
MS.gene89671	MS.gene39294	PPI
MS.gene89671	MS.gene029547	PPI
MS.gene95644	MS.gene89671	PPI
MS.gene89671	MS.gene47347	PPI
MS.gene89671	MS.gene01172	PPI
MS.gene89671	MS.gene00612	PPI
MS.gene89671	MS.gene45646	PPI
MS.gene89671	MS.gene95758	PPI
MS.gene89671	MS.gene046040	PPI
MS.gene89671	MS.gene000480	PPI
MS.gene89671	MS.gene09845	PPI
MS.gene89671	MS.gene90360	PPI
MS.gene89671	MS.gene064180	PPI
MS.gene89671	MS.gene022752	PPI
MS.gene89671	MS.gene94588	PPI
MS.gene89671	MS.gene31515	PPI
MS.gene89671	MS.gene034931	PPI
MS.gene89671	MS.gene065652	PPI
MS.gene89671	MS.gene77392	PPI
MS.gene89671	MS.gene45344	PPI
MS.gene51111	MS.gene89671	PPI
MS.gene89671	MS.gene073150	PPI
MS.gene89671	MS.gene002204	PPI
MS.gene89671	MS.gene012333	PPI
MS.gene89671	MS.gene039132	PPI
MS.gene89671	MS.gene98889	PPI
MS.gene89671	MS.gene059878	PPI
MS.gene89671	MS.gene59369	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene89671.t1	MTR_5g028350	85.121	289	40	2	1	286	1	289	6.43e-169	469
MS.gene89671.t1	MTR_8g075400	86.063	287	13	2	1	287	14	273	2.94e-162	452
MS.gene89671.t1	MTR_8g075400	96.847	222	7	0	1	222	1	222	2.73e-157	439

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene89671.t1	AT3G22660	63.889	288	97	3	2	288	12	293	1.01e-124	357

Find 68 sgRNAs with CRISPR-Local

Find 82 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTGCCTCCAAAGCCAAATT+TGG	0.135328	8.3:-28188252	None:intergenic
GCTGATACTACTAATGATTT+TGG	0.192046	8.3:+28188299	MS.gene89671:CDS
GATGTTAAGAATTCCAAATT+TGG	0.278385	8.3:+28188239	MS.gene89671:CDS
ATTAGCTGAACCATCTAAAA+AGG	0.298870	8.3:+28187611	MS.gene89671:CDS
TGTATCCATTCCACATTCTC+TGG	0.362791	8.3:-28187684	None:intergenic
AATTCCAAATTTGGCTTTGG+AGG	0.373337	8.3:+28188248	MS.gene89671:CDS
AAGAATTCCAAATTTGGCTT+TGG	0.378859	8.3:+28188245	MS.gene89671:CDS
GAAAAGACCTGGAGTGTCTC+CGG	0.423295	8.3:+28188154	MS.gene89671:CDS
AGTCACAGAAATTAAAAGAA+AGG	0.442695	8.3:+28187997	MS.gene89671:CDS
GTGTCTCCGGGTGACCGATC+AGG	0.444973	8.3:+28188167	MS.gene89671:CDS
CTTTGAGAAACTTCAGTCAA+TGG	0.454306	8.3:+28187812	MS.gene89671:CDS
CGATGGCGCAGATAAGGCTT+TGG	0.456534	8.3:+28188094	MS.gene89671:CDS
CTGCTCTTGATCGATGTCAA+TGG	0.460523	8.3:-28187715	None:intergenic
GTCACAGAAATTAAAAGAAA+GGG	0.462057	8.3:+28187998	MS.gene89671:CDS
GGTAAGGCAAAGCAAGCCTT+TGG	0.462245	8.3:+28188191	MS.gene89671:CDS
TAGTCTGCAGGCCTTAGAAA+AGG	0.462682	8.3:-28187840	None:intergenic
TGGCTTCTTTCCCTTTCCAA+AGG	0.463981	8.3:-28188207	None:intergenic
TGCAGACTATTACGCTGAAA+TGG	0.466246	8.3:+28187854	MS.gene89671:CDS
ACATTGAATCTGTTAAGAAA+TGG	0.472489	8.3:+28188039	MS.gene89671:CDS
TGCTGACGATGGCGCAGATA+AGG	0.473187	8.3:+28188088	MS.gene89671:CDS
AGAGGCTGAAGAGAGAAGAA+AGG	0.475560	8.3:+28187941	MS.gene89671:CDS
TTTGAGAAACTTCAGTCAAT+GGG	0.475684	8.3:+28187813	MS.gene89671:CDS
CTGAAGAGAGAAGAAAGGGC+AGG	0.484625	8.3:+28187946	MS.gene89671:CDS
GAGGAAGTAAGAAGAGAAAG+AGG	0.489339	8.3:+28188348	MS.gene89671:CDS
GCAAAGCAAGCCTTTGGAAA+GGG	0.492131	8.3:+28188197	MS.gene89671:CDS
AATGATGATACAATGGTTGA+TGG	0.492459	8.3:+28187525	MS.gene89671:CDS
AACCTCTTTAGATAATCTCT+TGG	0.505477	8.3:-28187973	None:intergenic
TTACCTCCTGATCGGTCACC+CGG	0.505687	8.3:-28188173	None:intergenic
TTTGGCTTTGGAGGCAAGAA+GGG	0.507591	8.3:+28188257	MS.gene89671:CDS
CATAAGCTGGCCAGAGAATG+TGG	0.514747	8.3:+28187674	MS.gene89671:CDS
AGATAAGGCTTTGGACTTCG+AGG	0.515894	8.3:+28188103	MS.gene89671:CDS
AGATTGAATGGAGCTGCCTC+TGG	0.515931	8.3:+28187500	None:intergenic
GGCATTGGAGGGTACTAGAC+AGG	0.518118	8.3:+28187788	MS.gene89671:CDS
TCTTCTGATTCTGATTCAGA+TGG	0.519325	8.3:-28187579	None:intergenic
ATTTGGCTTTGGAGGCAAGA+AGG	0.519353	8.3:+28188256	MS.gene89671:CDS
GCTTTGCCTTACCTCCTGAT+CGG	0.526130	8.3:-28188181	None:intergenic
GAGGCTGAAGAGAGAAGAAA+GGG	0.527920	8.3:+28187942	MS.gene89671:CDS
GATGCTCTATTAGATAAACT+TGG	0.532375	8.3:+28187648	MS.gene89671:CDS
AAAAGACCTGGAGTGTCTCC+GGG	0.535827	8.3:+28188155	MS.gene89671:CDS
ATTAGCAGAGAAGCAGAAGA+TGG	0.537363	8.3:+28187917	MS.gene89671:CDS
AGTCTGCAGGCCTTAGAAAA+GGG	0.538151	8.3:-28187839	None:intergenic
CGGTCAAAGAAGAAAAGACC+TGG	0.554286	8.3:+28188143	MS.gene89671:CDS
ATTTCAGCGTAATAGTCTGC+AGG	0.559772	8.3:-28187852	None:intergenic
CATTGACATCGATCAAGAGC+AGG	0.572289	8.3:+28187716	MS.gene89671:CDS
TGAAGAGAGAAGAAAGGGCA+GGG	0.572509	8.3:+28187947	MS.gene89671:CDS
ATAAACTTGGAGACATAAGC+TGG	0.573791	8.3:+28187661	MS.gene89671:CDS
GGGTGACCGATCAGGAGGTA+AGG	0.574615	8.3:+28188175	MS.gene89671:CDS
CGGTCACCCGGAGACACTCC+AGG	0.576723	8.3:-28188161	None:intergenic
GGCCAAGAGATTATCTAAAG+AGG	0.579968	8.3:+28187971	MS.gene89671:CDS
GGCAAAGCAAGCCTTTGGAA+AGG	0.581107	8.3:+28188196	MS.gene89671:CDS
AGAGAAGCAGAAGATGGTAG+AGG	0.581371	8.3:+28187923	MS.gene89671:CDS
AGTAGATGTTAATGATGACT+TGG	0.588825	8.3:+28187740	MS.gene89671:CDS
TTGAATCTGTTAAGAAATGG+AGG	0.588933	8.3:+28188042	MS.gene89671:CDS
TTTGGACTTCGAGGACGGAA+AGG	0.590393	8.3:+28188112	MS.gene89671:CDS
AGGAAGCAGAGGCAACAAAG+TGG	0.602796	8.3:+28188062	MS.gene89671:CDS
AAGGCTTTGGACTTCGAGGA+CGG	0.606211	8.3:+28188107	MS.gene89671:CDS
GGAAGCAGAGGCAACAAAGT+GGG	0.615514	8.3:+28188063	MS.gene89671:CDS
CAAAGTGGGTTTGCTGACGA+TGG	0.619387	8.3:+28188077	MS.gene89671:CDS
TTAAGAAATGGAGGAAGCAG+AGG	0.621715	8.3:+28188051	MS.gene89671:CDS
CATTGACTGAAGTTTCTCAA+AGG	0.625618	8.3:-28187811	None:intergenic
TCTCCGGGTGACCGATCAGG+AGG	0.644315	8.3:+28188170	MS.gene89671:CDS
GCTGGCCAGAGAATGTGGAA+TGG	0.647233	8.3:+28187679	MS.gene89671:CDS
ATTGTATCATCATTTACCAG+AGG	0.659574	8.3:-28187516	None:intergenic
AGGACGGAAAGGCGTTCGAG+CGG	0.661497	8.3:+28188123	MS.gene89671:CDS
TCTGGTAAATGATGATACAA+TGG	0.663757	8.3:+28187518	MS.gene89671:CDS
AGAGAGAAGAAAGGGCAGGG+AGG	0.683036	8.3:+28187950	MS.gene89671:CDS
TGAAGCTGAGTATTTGAGTG+AGG	0.691291	8.3:+28187548	MS.gene89671:CDS
GGTGAAGACAGATAGCCACA+TGG	0.738846	8.3:+28187875	MS.gene89671:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ACATTGAATCTGTTAAGAAA+TGG	+	chr8.3:28188039-28188058	MS.gene89671:CDS	25.0%
!	AGTCACAGAAATTAAAAGAA+AGG	+	chr8.3:28187997-28188016	MS.gene89671:CDS	25.0%
!	GATGTTAAGAATTCCAAATT+TGG	+	chr8.3:28188239-28188258	MS.gene89671:CDS	25.0%
!	GTCACAGAAATTAAAAGAAA+GGG	+	chr8.3:28187998-28188017	MS.gene89671:CDS	25.0%
!!	TTATTTACTGCCTTTTTAGA+TGG	-	chr8.3:28187624-28187643	None:intergenic	25.0%
!!	TTCTTAACATCTCTTTTCTT+TGG	-	chr8.3:28188230-28188249	None:intergenic	25.0%
	AACCTCTTTAGATAATCTCT+TGG	-	chr8.3:28187976-28187995	None:intergenic	30.0%
	AATGATGATACAATGGTTGA+TGG	+	chr8.3:28187525-28187544	MS.gene89671:CDS	30.0%
	ACATGGAAAAAGTGAAAAGT+CGG	+	chr8.3:28187892-28187911	MS.gene89671:CDS	30.0%
	AGTAGATGTTAATGATGACT+TGG	+	chr8.3:28187740-28187759	MS.gene89671:CDS	30.0%
	ATTAGCTGAACCATCTAAAA+AGG	+	chr8.3:28187611-28187630	MS.gene89671:CDS	30.0%
	ATTGTATCATCATTTACCAG+AGG	-	chr8.3:28187519-28187538	None:intergenic	30.0%
	GATGCTCTATTAGATAAACT+TGG	+	chr8.3:28187648-28187667	MS.gene89671:CDS	30.0%
	TCTGGTAAATGATGATACAA+TGG	+	chr8.3:28187518-28187537	MS.gene89671:CDS	30.0%
	TTGAATCTGTTAAGAAATGG+AGG	+	chr8.3:28188042-28188061	MS.gene89671:CDS	30.0%
	TTTGAGAAACTTCAGTCAAT+GGG	+	chr8.3:28187813-28187832	MS.gene89671:CDS	30.0%
!	AAGAATTCCAAATTTGGCTT+TGG	+	chr8.3:28188245-28188264	MS.gene89671:CDS	30.0%
!	GATACTACTAATGATTTTGG+TGG	+	chr8.3:28188302-28188321	MS.gene89671:CDS	30.0%
!	GCTGATACTACTAATGATTT+TGG	+	chr8.3:28188299-28188318	MS.gene89671:CDS	30.0%
	ATAAACTTGGAGACATAAGC+TGG	+	chr8.3:28187661-28187680	MS.gene89671:CDS	35.0%
	TCTTCTGATTCTGATTCAGA+TGG	-	chr8.3:28187582-28187601	None:intergenic	35.0%
!	AATGTCGTTCTTTTTCTGCT+TGG	-	chr8.3:28188024-28188043	None:intergenic	35.0%
!	CATTGACTGAAGTTTCTCAA+AGG	-	chr8.3:28187814-28187833	None:intergenic	35.0%
!	CTTTGAGAAACTTCAGTCAA+TGG	+	chr8.3:28187812-28187831	MS.gene89671:CDS	35.0%
!	TTTGGTGGCTTCAGTAAAAA+GGG	+	chr8.3:28188317-28188336	MS.gene89671:CDS	35.0%
!!	AATTCCAAATTTGGCTTTGG+AGG	+	chr8.3:28188248-28188267	MS.gene89671:CDS	35.0%
!!	TTTTGGTGGCTTCAGTAAAA+AGG	+	chr8.3:28188316-28188335	MS.gene89671:CDS	35.0%
!!!	GACTTTTCACTTTTTCCATG+TGG	-	chr8.3:28187893-28187912	None:intergenic	35.0%
	ATTAGCAGAGAAGCAGAAGA+TGG	+	chr8.3:28187917-28187936	MS.gene89671:CDS	40.0%
	ATTTCAGCGTAATAGTCTGC+AGG	-	chr8.3:28187855-28187874	None:intergenic	40.0%
	GAGGAAGTAAGAAGAGAAAG+AGG	+	chr8.3:28188348-28188367	MS.gene89671:CDS	40.0%
	GGCCAAGAGATTATCTAAAG+AGG	+	chr8.3:28187971-28187990	MS.gene89671:CDS	40.0%
	TGAAGCTGAGTATTTGAGTG+AGG	+	chr8.3:28187548-28187567	MS.gene89671:CDS	40.0%
	TGCAGACTATTACGCTGAAA+TGG	+	chr8.3:28187854-28187873	MS.gene89671:CDS	40.0%
	TGTATCCATTCCACATTCTC+TGG	-	chr8.3:28187687-28187706	None:intergenic	40.0%
	TTAAGAAATGGAGGAAGCAG+AGG	+	chr8.3:28188051-28188070	MS.gene89671:CDS	40.0%
!	AGAGCTTGCATTTTACACTC+AGG	+	chr8.3:28187767-28187786	MS.gene89671:CDS	40.0%
!	TGCATTTTACACTCAGGCAT+TGG	+	chr8.3:28187773-28187792	MS.gene89671:CDS	40.0%
!!	TTCAGTAAAAAGGGTGCTGT+TGG	+	chr8.3:28188326-28188345	MS.gene89671:CDS	40.0%
!!!	ATTTTACACTCAGGCATTGG+AGG	+	chr8.3:28187776-28187795	MS.gene89671:CDS	40.0%
!!!	TTTTACACTCAGGCATTGGA+GGG	+	chr8.3:28187777-28187796	MS.gene89671:CDS	40.0%
	AGAGAAGCAGAAGATGGTAG+AGG	+	chr8.3:28187923-28187942	MS.gene89671:CDS	45.0%
	AGAGGCTGAAGAGAGAAGAA+AGG	+	chr8.3:28187941-28187960	MS.gene89671:CDS	45.0%
	AGTCTGCAGGCCTTAGAAAA+GGG	-	chr8.3:28187842-28187861	None:intergenic	45.0%
	CATTGACATCGATCAAGAGC+AGG	+	chr8.3:28187716-28187735	MS.gene89671:CDS	45.0%
	CGGTCAAAGAAGAAAAGACC+TGG	+	chr8.3:28188143-28188162	MS.gene89671:CDS	45.0%
	CTGCTCTTGATCGATGTCAA+TGG	-	chr8.3:28187718-28187737	None:intergenic	45.0%
	CTTGCCTCCAAAGCCAAATT+TGG	-	chr8.3:28188255-28188274	None:intergenic	45.0%
	GAGGCTGAAGAGAGAAGAAA+GGG	+	chr8.3:28187942-28187961	MS.gene89671:CDS	45.0%
	TAGTCTGCAGGCCTTAGAAA+AGG	-	chr8.3:28187843-28187862	None:intergenic	45.0%
	TGAAGAGAGAAGAAAGGGCA+GGG	+	chr8.3:28187947-28187966	MS.gene89671:CDS	45.0%
	TGGCTTCTTTCCCTTTCCAA+AGG	-	chr8.3:28188210-28188229	None:intergenic	45.0%
!	CAATGGGTCTCCCTTTTCTA+AGG	+	chr8.3:28187829-28187848	MS.gene89671:CDS	45.0%
!	GCAAAGCAAGCCTTTGGAAA+GGG	+	chr8.3:28188197-28188216	MS.gene89671:CDS	45.0%
!!	AGATAAGGCTTTGGACTTCG+AGG	+	chr8.3:28188103-28188122	MS.gene89671:CDS	45.0%
!!	AGTAAAAAGGGTGCTGTTGG+AGG	+	chr8.3:28188329-28188348	MS.gene89671:CDS	45.0%
!!	ATTTGGCTTTGGAGGCAAGA+AGG	+	chr8.3:28188256-28188275	MS.gene89671:CDS	45.0%
!!	TTTGGCTTTGGAGGCAAGAA+GGG	+	chr8.3:28188257-28188276	MS.gene89671:CDS	45.0%
	AGGAAGCAGAGGCAACAAAG+TGG	+	chr8.3:28188062-28188081	MS.gene89671:CDS	50.0%
	CATAAGCTGGCCAGAGAATG+TGG	+	chr8.3:28187674-28187693	MS.gene89671:CDS	50.0%
	CTGAAGAGAGAAGAAAGGGC+AGG	+	chr8.3:28187946-28187965	MS.gene89671:CDS	50.0%
	GCTTTGCCTTACCTCCTGAT+CGG	-	chr8.3:28188184-28188203	None:intergenic	50.0%
	GGAAGCAGAGGCAACAAAGT+GGG	+	chr8.3:28188063-28188082	MS.gene89671:CDS	50.0%
	GGTAAGGCAAAGCAAGCCTT+TGG	+	chr8.3:28188191-28188210	MS.gene89671:CDS	50.0%
	GGTGAAGACAGATAGCCACA+TGG	+	chr8.3:28187875-28187894	MS.gene89671:CDS	50.0%
	TTTGGACTTCGAGGACGGAA+AGG	+	chr8.3:28188112-28188131	MS.gene89671:CDS	50.0%
!	AAAAGACCTGGAGTGTCTCC+GGG	+	chr8.3:28188155-28188174	MS.gene89671:CDS	50.0%
!	GAAAAGACCTGGAGTGTCTC+CGG	+	chr8.3:28188154-28188173	MS.gene89671:CDS	50.0%
!	GGCAAAGCAAGCCTTTGGAA+AGG	+	chr8.3:28188196-28188215	MS.gene89671:CDS	50.0%
!!	AAGGCTTTGGACTTCGAGGA+CGG	+	chr8.3:28188107-28188126	MS.gene89671:CDS	50.0%
!!	CAAAGTGGGTTTGCTGACGA+TGG	+	chr8.3:28188077-28188096	MS.gene89671:CDS	50.0%
	AGAGAGAAGAAAGGGCAGGG+AGG	+	chr8.3:28187950-28187969	MS.gene89671:CDS	55.0%
	CGATGGCGCAGATAAGGCTT+TGG	+	chr8.3:28188094-28188113	MS.gene89671:CDS	55.0%
	GCTGGCCAGAGAATGTGGAA+TGG	+	chr8.3:28187679-28187698	MS.gene89671:CDS	55.0%
	TGCTGACGATGGCGCAGATA+AGG	+	chr8.3:28188088-28188107	MS.gene89671:CDS	55.0%
	TTACCTCCTGATCGGTCACC+CGG	-	chr8.3:28188176-28188195	None:intergenic	55.0%
!!	GGCATTGGAGGGTACTAGAC+AGG	+	chr8.3:28187788-28187807	MS.gene89671:CDS	55.0%
	GGGTGACCGATCAGGAGGTA+AGG	+	chr8.3:28188175-28188194	MS.gene89671:CDS	60.0%
!!	AGGACGGAAAGGCGTTCGAG+CGG	+	chr8.3:28188123-28188142	MS.gene89671:CDS	60.0%
	GTGTCTCCGGGTGACCGATC+AGG	+	chr8.3:28188167-28188186	MS.gene89671:CDS	65.0%
	TCTCCGGGTGACCGATCAGG+AGG	+	chr8.3:28188170-28188189	MS.gene89671:CDS	65.0%
	CGGTCACCCGGAGACACTCC+AGG	-	chr8.3:28188164-28188183	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.3	gene	28187507	28188373	28187507	ID=MS.gene89671
chr8.3	mRNA	28187507	28188373	28187507	ID=MS.gene89671.t1;Parent=MS.gene89671
chr8.3	exon	28187507	28188373	28187507	ID=MS.gene89671.t1.exon1;Parent=MS.gene89671.t1
chr8.3	CDS	28187507	28188373	28187507	ID=cds.MS.gene89671.t1;Parent=MS.gene89671.t1

Gene Sequence

>MS.gene89671

ATGGAGCTGCCTCTGGTAAATGATGATACAATGGTTGATGGTGAAGCTGAGTATTTGAGTGAGGAAATGTCACCATCTGAATCAGAATCAGAAGAAGATGTGAAATTAGCTGAACCATCTAAAAAGGCAGTAAATAACAGAGATGCTCTATTAGATAAACTTGGAGACATAAGCTGGCCAGAGAATGTGGAATGGATACACAAACTCTCCATTGACATCGATCAAGAGCAGGAAGTAGATGTTAATGATGACTTGGCACGAGAGCTTGCATTTTACACTCAGGCATTGGAGGGTACTAGACAGGCCTTTGAGAAACTTCAGTCAATGGGTCTCCCTTTTCTAAGGCCTGCAGACTATTACGCTGAAATGGTGAAGACAGATAGCCACATGGAAAAAGTGAAAAGTCGGCTATTAGCAGAGAAGCAGAAGATGGTAGAGGCTGAAGAGAGAAGAAAGGGCAGGGAGGCCAAGAGATTATCTAAAGAGGTTCAGTCACAGAAATTAAAAGAAAGGGCCAAGCAGAAAAAGAACGACATTGAATCTGTTAAGAAATGGAGGAAGCAGAGGCAACAAAGTGGGTTTGCTGACGATGGCGCAGATAAGGCTTTGGACTTCGAGGACGGAAAGGCGTTCGAGCGGTCAAAGAAGAAAAGACCTGGAGTGTCTCCGGGTGACCGATCAGGAGGTAAGGCAAAGCAAGCCTTTGGAAAGGGAAAGAAGCCAAAGAAAAGAGATGTTAAGAATTCCAAATTTGGCTTTGGAGGCAAGAAGGGTTTGAAGAAGCAGAATACAGCTGATACTACTAATGATTTTGGTGGCTTCAGTAAAAAGGGTGCTGTTGGAGGAAGTAAGAAGAGAAAGAGGTAA

Protein sequence

>MS.gene89671.t1

MELPLVNDDTMVDGEAEYLSEEMSPSESESEEDVKLAEPSKKAVNNRDALLDKLGDISWPENVEWIHKLSIDIDQEQEVDVNDDLARELAFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKTDSHMEKVKSRLLAEKQKMVEAEERRKGREAKRLSKEVQSQKLKERAKQKKNDIESVKKWRKQRQQSGFADDGADKALDFEDGKAFERSKKKRPGVSPGDRSGGKAKQAFGKGKKPKKRDVKNSKFGFGGKKGLKKQNTADTTNDFGGFSKKGAVGGSKKRKR