Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041441.01.T01 | XP_003626108.2 | 98.99 | 99 | 1 | 0 | 1 | 99 | 215 | 313 | 5.02E-61 | 198 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041441.01.T01 | Q9SHZ8 | 39.785 | 93 | 54 | 2 | 1 | 93 | 566 | 656 | 4.94E-14 | 69.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041441.01.T01 | Q2HUZ9 | 98.990 | 99 | 1 | 0 | 1 | 99 | 319 | 417 | 9.61e-61 | 200 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048618.01 | MsG0780041441.01 | 0.820835 | 5.559483e-53 | 4.447887e-50 |
| MsG0080048683.01 | MsG0780041441.01 | 0.838146 | 3.420651e-57 | 4.540384e-54 |
| MsG0080048764.01 | MsG0780041441.01 | 0.813996 | 1.929278e-51 | 1.279056e-48 |
| MsG0080049148.01 | MsG0780041441.01 | 0.822962 | 1.788934e-53 | 1.519798e-50 |
| MsG0180000157.01 | MsG0780041441.01 | 0.833641 | 4.745865e-56 | 5.498441e-53 |
| MsG0180000240.01 | MsG0780041441.01 | -0.821937 | 3.095820e-53 | 2.554338e-50 |
| MsG0180000444.01 | MsG0780041441.01 | 0.810085 | 1.373329e-50 | 8.201796e-48 |
| MsG0180000470.01 | MsG0780041441.01 | 0.822364 | 2.463967e-53 | 2.058175e-50 |
| MsG0180000550.01 | MsG0780041441.01 | 0.835512 | 1.606806e-56 | 1.969250e-53 |
| MsG0180000669.01 | MsG0780041441.01 | 0.823840 | 1.115208e-53 | 9.712603e-51 |
| MsG0180000679.01 | MsG0780041441.01 | 0.826351 | 2.844720e-54 | 2.661318e-51 |
| MsG0180000828.01 | MsG0780041441.01 | 0.836911 | 7.087430e-57 | 9.059633e-54 |
| MsG0180001043.01 | MsG0780041441.01 | 0.811656 | 6.277423e-51 | 3.907923e-48 |
| MsG0180001663.01 | MsG0780041441.01 | 0.808631 | 2.816465e-50 | 1.618446e-47 |
| MsG0180001712.01 | MsG0780041441.01 | 0.846104 | 2.678169e-59 | 4.559861e-56 |
| MsG0180002482.01 | MsG0780041441.01 | 0.830136 | 3.480656e-55 | 3.635311e-52 |
| MsG0180003188.01 | MsG0780041441.01 | 0.805966 | 1.034006e-49 | 5.545324e-47 |
| MsG0180003854.01 | MsG0780041441.01 | 0.807032 | 6.160472e-50 | 3.395330e-47 |
| MsG0180003952.01 | MsG0780041441.01 | 0.842735 | 2.157032e-58 | 3.300606e-55 |
| MsG0180004675.01 | MsG0780041441.01 | 0.813812 | 2.117214e-51 | 1.396771e-48 |
| MsG0180004765.01 | MsG0780041441.01 | 0.810089 | 1.370897e-50 | 8.187992e-48 |
| MsG0180004886.01 | MsG0780041441.01 | -0.822527 | 2.259242e-53 | 1.895864e-50 |
| MsG0180005303.01 | MsG0780041441.01 | -0.815924 | 7.203415e-52 | 5.032810e-49 |
| MsG0180005382.01 | MsG0780041441.01 | 0.805288 | 1.434996e-49 | 7.562722e-47 |
| MsG0180005424.01 | MsG0780041441.01 | 0.813197 | 2.891523e-51 | 1.875829e-48 |
| MsG0180005604.01 | MsG0780041441.01 | 0.811678 | 6.209094e-51 | 3.867564e-48 |
| MsG0180006064.01 | MsG0780041441.01 | -0.843888 | 1.062261e-58 | 1.685807e-55 |
| MsG0180006220.01 | MsG0780041441.01 | 0.821297 | 4.351339e-53 | 3.526157e-50 |
| MsG0280006302.01 | MsG0780041441.01 | -0.819174 | 1.333871e-52 | 1.018929e-49 |
| MsG0780040596.01 | MsG0780041441.01 | 0.852959 | 3.276829e-61 | 6.966351e-58 |
| MsG0780040726.01 | MsG0780041441.01 | 0.820584 | 6.349663e-53 | 5.044224e-50 |
| MsG0780040734.01 | MsG0780041441.01 | 0.805253 | 1.459398e-49 | 7.684097e-47 |
| MsG0780041101.01 | MsG0780041441.01 | 0.813643 | 2.307229e-51 | 1.515128e-48 |
| MsG0780041441.01 | MsG0780041456.01 | 0.828273 | 9.852018e-55 | 9.745444e-52 |
| MsG0780041441.01 | MsG0780041507.01 | 0.851153 | 1.068082e-60 | 2.141959e-57 |
| MsG0780041441.01 | MsG0880042118.01 | 0.832892 | 7.290961e-56 | 8.260360e-53 |
| MsG0780041441.01 | MsG0880042294.01 | 0.815764 | 7.821105e-52 | 5.440997e-49 |
| MsG0780041441.01 | MsG0880042611.01 | 0.854918 | 8.936287e-62 | 2.027640e-58 |
| MsG0780041441.01 | MsG0880042612.01 | 0.803960 | 2.716037e-49 | 1.383360e-46 |
| MsG0780041441.01 | MsG0880042966.01 | 0.801629 | 8.226643e-49 | 3.947661e-46 |
| MsG0780041441.01 | MsG0880045605.01 | -0.811153 | 8.072685e-51 | 4.959549e-48 |
| MsG0780041441.01 | MsG0880045765.01 | 0.807363 | 5.244299e-50 | 2.915218e-47 |
| MsG0780041441.01 | MsG0880046073.01 | 0.812231 | 4.705144e-51 | 2.975057e-48 |
| MsG0780041441.01 | MsG0880046384.01 | -0.804028 | 2.629145e-49 | 1.341416e-46 |
| MsG0780041441.01 | MsG0880046963.01 | -0.823289 | 1.501036e-53 | 1.286971e-50 |
| MsG0780041441.01 | MsG0880047608.01 | 0.810303 | 1.232706e-50 | 7.403815e-48 |
| MsG0280011059.01 | MsG0780041441.01 | -0.816444 | 5.512391e-52 | 3.906387e-49 |
| MsG0280011376.01 | MsG0780041441.01 | 0.816698 | 4.835681e-52 | 3.450858e-49 |
| MsG0280011387.01 | MsG0780041441.01 | 0.812010 | 5.257219e-51 | 3.304115e-48 |
| MsG0380012007.01 | MsG0780041441.01 | 0.804906 | 1.725359e-49 | 9.004948e-47 |
| MsG0380012186.01 | MsG0780041441.01 | 0.801180 | 1.016668e-48 | 4.823808e-46 |
| MsG0380012661.01 | MsG0780041441.01 | -0.826563 | 2.532342e-54 | 2.383307e-51 |
| MsG0680031020.01 | MsG0780041441.01 | 0.806852 | 6.724964e-50 | 3.689236e-47 |
| MsG0680031446.01 | MsG0780041441.01 | -0.800761 | 1.238268e-48 | 5.813003e-46 |
| MsG0680031459.01 | MsG0780041441.01 | 0.818809 | 1.614678e-52 | 1.221057e-49 |
| MsG0680032204.01 | MsG0780041441.01 | 0.815080 | 1.110586e-51 | 7.581954e-49 |
| MsG0680032460.01 | MsG0780041441.01 | -0.813080 | 3.067596e-51 | 1.983739e-48 |
| MsG0680032996.01 | MsG0780041441.01 | 0.838150 | 3.410784e-57 | 4.527879e-54 |
| MsG0680034433.01 | MsG0780041441.01 | 0.804024 | 2.634540e-49 | 1.344040e-46 |
| MsG0480018606.01 | MsG0780041441.01 | 0.800641 | 1.309940e-48 | 6.131051e-46 |
| MsG0480019163.01 | MsG0780041441.01 | -0.823469 | 1.362229e-53 | 1.173921e-50 |
| MsG0480019373.01 | MsG0780041441.01 | 0.801115 | 1.048290e-48 | 4.965802e-46 |
| MsG0480020136.01 | MsG0780041441.01 | 0.820751 | 5.813985e-53 | 4.640351e-50 |
| MsG0480020874.01 | MsG0780041441.01 | 0.816349 | 5.789580e-52 | 4.092622e-49 |
| MsG0480021061.01 | MsG0780041441.01 | 0.804285 | 2.325113e-49 | 1.194123e-46 |
| MsG0480021164.01 | MsG0780041441.01 | 0.818429 | 1.969298e-52 | 1.473812e-49 |
| MsG0480021215.01 | MsG0780041441.01 | 0.802684 | 4.992826e-49 | 2.461075e-46 |
| MsG0480021536.01 | MsG0780041441.01 | 0.818676 | 1.730825e-52 | 1.304112e-49 |
| MsG0480021776.01 | MsG0780041441.01 | -0.805151 | 1.533147e-49 | 8.051692e-47 |
| MsG0480021853.01 | MsG0780041441.01 | 0.809446 | 1.884917e-50 | 1.106910e-47 |
| MsG0480022035.01 | MsG0780041441.01 | 0.805995 | 1.019908e-49 | 5.473839e-47 |
| MsG0480022222.01 | MsG0780041441.01 | 0.802544 | 5.335550e-49 | 2.620675e-46 |
| MsG0480022493.01 | MsG0780041441.01 | 0.803575 | 3.264725e-49 | 1.646508e-46 |
| MsG0480022533.01 | MsG0780041441.01 | 0.828880 | 7.029968e-55 | 7.077058e-52 |
| MsG0480022707.01 | MsG0780041441.01 | 0.822030 | 2.945098e-53 | 2.436398e-50 |
| MsG0480022762.01 | MsG0780041441.01 | 0.804495 | 2.101903e-49 | 1.085304e-46 |
| MsG0480022768.01 | MsG0780041441.01 | 0.815944 | 7.130707e-52 | 4.984659e-49 |
| MsG0480023660.01 | MsG0780041441.01 | 0.800124 | 1.669531e-48 | 7.712142e-46 |
| MsG0480023776.01 | MsG0780041441.01 | 0.816349 | 5.789455e-52 | 4.092538e-49 |
| MsG0480023814.01 | MsG0780041441.01 | 0.842154 | 3.074977e-58 | 4.620692e-55 |
| MsG0580024495.01 | MsG0780041441.01 | 0.853046 | 3.095076e-61 | 6.599517e-58 |
| MsG0580025182.01 | MsG0780041441.01 | -0.801297 | 9.623139e-49 | 4.579453e-46 |
| MsG0580025328.01 | MsG0780041441.01 | 0.801040 | 1.085875e-48 | 5.134344e-46 |
| MsG0580025448.01 | MsG0780041441.01 | 0.813071 | 3.081714e-51 | 1.992396e-48 |
| MsG0580025799.01 | MsG0780041441.01 | 0.825186 | 5.377042e-54 | 4.866415e-51 |
| MsG0380015166.01 | MsG0780041441.01 | 0.807172 | 5.756551e-50 | 3.184151e-47 |
| MsG0380015779.01 | MsG0780041441.01 | 0.814182 | 1.755320e-51 | 1.169654e-48 |
| MsG0380015934.01 | MsG0780041441.01 | 0.803242 | 3.826902e-49 | 1.913427e-46 |
| MsG0380016004.01 | MsG0780041441.01 | 0.817945 | 2.534226e-52 | 1.871324e-49 |
| MsG0380016191.01 | MsG0780041441.01 | -0.821514 | 3.876986e-53 | 3.160729e-50 |
| MsG0380016828.01 | MsG0780041441.01 | -0.836031 | 1.187358e-56 | 1.478059e-53 |
| MsG0380016910.01 | MsG0780041441.01 | 0.824173 | 9.315884e-54 | 8.189627e-51 |
| MsG0380017023.01 | MsG0780041441.01 | 0.804439 | 2.158999e-49 | 1.113189e-46 |
| MsG0380017178.01 | MsG0780041441.01 | -0.801214 | 1.000663e-48 | 4.751941e-46 |
| MsG0380017263.01 | MsG0780041441.01 | -0.807824 | 4.184885e-50 | 2.354429e-47 |
| MsG0380017584.01 | MsG0780041441.01 | 0.808618 | 2.834786e-50 | 1.628404e-47 |
| MsG0380017680.01 | MsG0780041441.01 | 0.832619 | 8.523071e-56 | 9.578012e-53 |
| MsG0380017746.01 | MsG0780041441.01 | 0.838325 | 3.075722e-57 | 4.104994e-54 |
| MsG0480018331.01 | MsG0780041441.01 | 0.826241 | 3.022267e-54 | 2.818521e-51 |
| MsG0580026319.01 | MsG0780041441.01 | 0.803137 | 4.023150e-49 | 2.006138e-46 |
| MsG0580027034.01 | MsG0780041441.01 | 0.826403 | 2.765653e-54 | 2.591186e-51 |
| MsG0580027361.01 | MsG0780041441.01 | 0.805064 | 1.598680e-49 | 8.377088e-47 |
| MsG0580027401.01 | MsG0780041441.01 | 0.818373 | 2.027823e-52 | 1.515306e-49 |
| MsG0580028044.01 | MsG0780041441.01 | 0.821485 | 3.937137e-53 | 3.207295e-50 |
| MsG0580028418.01 | MsG0780041441.01 | 0.817765 | 2.783384e-52 | 2.045306e-49 |
| MsG0580028901.01 | MsG0780041441.01 | 0.803841 | 2.875234e-49 | 1.459978e-46 |
| MsG0580029549.01 | MsG0780041441.01 | 0.810093 | 1.367827e-50 | 8.170788e-48 |
| MsG0580029717.01 | MsG0780041441.01 | 0.800026 | 1.747928e-48 | 8.054155e-46 |
| MsG0680030415.01 | MsG0780041441.01 | 0.809505 | 1.830531e-50 | 1.076670e-47 |
| MsG0680030629.01 | MsG0780041441.01 | 0.804116 | 2.520655e-49 | 1.288965e-46 |
| MsG0680030636.01 | MsG0780041441.01 | 0.809887 | 1.515403e-50 | 9.003498e-48 |
| MsG0280006491.01 | MsG0780041441.01 | 0.803974 | 2.698367e-49 | 1.374838e-46 |
| MsG0280007164.01 | MsG0780041441.01 | 0.820377 | 7.085105e-53 | 5.596915e-50 |
| MsG0280007547.01 | MsG0780041441.01 | 0.825155 | 5.467708e-54 | 4.944153e-51 |
| MsG0280008613.01 | MsG0780041441.01 | 0.806545 | 7.809288e-50 | 4.250358e-47 |
| MsG0280010182.01 | MsG0780041441.01 | 0.804764 | 1.847025e-49 | 9.604081e-47 |
| MsG0280010378.01 | MsG0780041441.01 | 0.826574 | 2.517609e-54 | 2.370110e-51 |
| MsG0280010443.01 | MsG0780041441.01 | 0.809220 | 2.106973e-50 | 1.229944e-47 |
| MsG0680035704.01 | MsG0780041441.01 | 0.816083 | 6.637742e-52 | 4.658229e-49 |
| MsG0780035948.01 | MsG0780041441.01 | 0.826980 | 2.014176e-54 | 1.918645e-51 |
| MsG0780036190.01 | MsG0780041441.01 | 0.806973 | 6.339938e-50 | 3.488854e-47 |
| MsG0780036964.01 | MsG0780041441.01 | 0.837815 | 4.160526e-57 | 5.467930e-54 |
| MsG0780037082.01 | MsG0780041441.01 | 0.825280 | 5.109529e-54 | 4.636410e-51 |
| MsG0780037512.01 | MsG0780041441.01 | 0.802850 | 4.612661e-49 | 2.283452e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041441.01.T01 | MTR_7g111120 | 98.990 | 99 | 1 | 0 | 1 | 99 | 319 | 417 | 2.44e-64 | 200 |
| MsG0780041441.01.T01 | MTR_1g103840 | 36.559 | 93 | 57 | 2 | 1 | 93 | 562 | 652 | 3.93e-14 | 66.6 |
| MsG0780041441.01.T01 | MTR_4g086490 | 32.609 | 92 | 60 | 2 | 2 | 93 | 925 | 1014 | 1.49e-12 | 62.4 |
| MsG0780041441.01.T01 | MTR_2g101710 | 33.721 | 86 | 55 | 2 | 2 | 87 | 401 | 484 | 2.03e-12 | 62.0 |
| MsG0780041441.01.T01 | MTR_8g086560 | 32.609 | 92 | 60 | 2 | 2 | 93 | 650 | 739 | 2.21e-12 | 61.6 |
| MsG0780041441.01.T01 | MTR_4g064770 | 40.000 | 95 | 55 | 2 | 2 | 96 | 457 | 549 | 3.21e-12 | 61.2 |
| MsG0780041441.01.T01 | MTR_7g083820 | 35.955 | 89 | 55 | 2 | 2 | 90 | 453 | 539 | 5.26e-12 | 60.8 |
| MsG0780041441.01.T01 | MTR_5g091640 | 34.831 | 89 | 55 | 3 | 1 | 89 | 416 | 501 | 7.93e-12 | 60.1 |
| MsG0780041441.01.T01 | MTR_2g436470 | 34.783 | 92 | 55 | 1 | 2 | 93 | 287 | 373 | 2.08e-11 | 58.9 |
| MsG0780041441.01.T01 | MTR_5g006570 | 35.065 | 77 | 48 | 2 | 1 | 77 | 618 | 692 | 2.69e-11 | 58.5 |
| MsG0780041441.01.T01 | MTR_5g027980 | 32.258 | 93 | 61 | 1 | 1 | 93 | 226 | 316 | 3.80e-11 | 58.2 |
| MsG0780041441.01.T01 | MTR_2g094430 | 29.348 | 92 | 63 | 2 | 2 | 93 | 459 | 548 | 5.14e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041441.01.T01 | AT2G22070 | 39.785 | 93 | 54 | 2 | 1 | 93 | 566 | 656 | 5.03e-15 | 69.3 |
| MsG0780041441.01.T01 | AT5G08510 | 36.957 | 92 | 56 | 2 | 2 | 93 | 369 | 458 | 2.34e-13 | 64.7 |
| MsG0780041441.01.T01 | AT1G17630 | 42.105 | 76 | 42 | 2 | 2 | 77 | 587 | 660 | 1.31e-12 | 62.4 |
| MsG0780041441.01.T01 | AT1G17630 | 42.105 | 76 | 42 | 2 | 2 | 77 | 587 | 660 | 1.31e-12 | 62.4 |
| MsG0780041441.01.T01 | AT4G18750 | 33.696 | 92 | 59 | 2 | 2 | 93 | 652 | 741 | 6.06e-12 | 60.5 |
| MsG0780041441.01.T01 | AT1G09410 | 31.522 | 92 | 61 | 2 | 2 | 93 | 485 | 574 | 8.40e-12 | 60.1 |
| MsG0780041441.01.T01 | AT5G50990 | 38.043 | 92 | 52 | 2 | 2 | 93 | 318 | 404 | 1.12e-11 | 59.7 |
| MsG0780041441.01.T01 | AT5G59200 | 35.065 | 77 | 48 | 1 | 2 | 78 | 408 | 482 | 6.94e-11 | 57.4 |
Find 25 sgRNAs with CRISPR-Local
Find 27 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGAAGAAGTTGATTATTA+AGG | 0.294543 | 7:-90942252 | MsG0780041441.01.T01:CDS |
| GGAACCAGATGTTGTTGTTT+TGG | 0.308448 | 7:-90942435 | MsG0780041441.01.T01:CDS |
| TTCCTTCTTGTCAGCTTGCA+AGG | 0.383847 | 7:-90942411 | MsG0780041441.01.T01:CDS |
| TGACATACAAATCAGCAATA+AGG | 0.392252 | 7:+90942303 | None:intergenic |
| GCAAAGCCAGAAAATTATAG+AGG | 0.398083 | 7:-90942335 | MsG0780041441.01.T01:CDS |
| TATTAAGGAACATTTGAAAC+AGG | 0.402540 | 7:-90942237 | MsG0780041441.01.T01:CDS |
| ATTGCTGATTTGTATGTCAT+AGG | 0.404345 | 7:-90942299 | MsG0780041441.01.T01:CDS |
| TCTGTCGAAATTTAACCCCT+TGG | 0.459067 | 7:+90942214 | None:intergenic |
| GAACCCAAAACAACAACATC+TGG | 0.475079 | 7:+90942431 | None:intergenic |
| GGGTTAAATTTCGACAGAAA+CGG | 0.480655 | 7:-90942209 | MsG0780041441.01.T01:CDS |
| GATTATCAAAATGATGAAAG+TGG | 0.512650 | 7:-90942456 | MsG0780041441.01.T01:CDS |
| CTCCTTGCAAGCTGACAAGA+AGG | 0.547042 | 7:+90942409 | None:intergenic |
| GCAATTTGAGATTGCTGAGG+GGG | 0.562458 | 7:-90942381 | MsG0780041441.01.T01:CDS |
| GGAACATTTGAAACAGGCCA+AGG | 0.567291 | 7:-90942231 | MsG0780041441.01.T01:CDS |
| GAACATTTGAAACAGGCCAA+GGG | 0.576485 | 7:-90942230 | MsG0780041441.01.T01:CDS |
| GATTGAGCAGGTTCTGAGGA+TGG | 0.580842 | 7:-90942357 | MsG0780041441.01.T01:CDS |
| AAGCAATTTGAGATTGCTGA+GGG | 0.589492 | 7:-90942383 | MsG0780041441.01.T01:CDS |
| ATAAATCAGAAGAGGCTGAA+AGG | 0.595466 | 7:-90942274 | MsG0780041441.01.T01:CDS |
| TGGGAAAAGTGGGATGCTAG+AGG | 0.604207 | 7:-90942489 | None:intergenic |
| GGGTGATTGAGCAGGTTCTG+AGG | 0.605555 | 7:-90942361 | MsG0780041441.01.T01:CDS |
| CATAGGTGATAAATCAGAAG+AGG | 0.606377 | 7:-90942282 | MsG0780041441.01.T01:CDS |
| CAAAGCCAGAAAATTATAGA+GGG | 0.615887 | 7:-90942334 | MsG0780041441.01.T01:CDS |
| AGCAATTTGAGATTGCTGAG+GGG | 0.621245 | 7:-90942382 | MsG0780041441.01.T01:CDS |
| CAAGCAATTTGAGATTGCTG+AGG | 0.621882 | 7:-90942384 | MsG0780041441.01.T01:CDS |
| AACATTTGAAACAGGCCAAG+GGG | 0.642858 | 7:-90942229 | MsG0780041441.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GATTATCAAAATGATGAAAG+TGG | - | Chr7:90942219-90942238 | MsG0780041441.01.T01:CDS | 25.0% |
| !! | GATGAAGAAGTTGATTATTA+AGG | - | Chr7:90942423-90942442 | MsG0780041441.01.T01:CDS | 25.0% |
| !! | TATTAAGGAACATTTGAAAC+AGG | - | Chr7:90942438-90942457 | MsG0780041441.01.T01:CDS | 25.0% |
| CAAAGCCAGAAAATTATAGA+GGG | - | Chr7:90942341-90942360 | MsG0780041441.01.T01:CDS | 30.0% | |
| TGACATACAAATCAGCAATA+AGG | + | Chr7:90942375-90942394 | None:intergenic | 30.0% | |
| ! | TAAAGCCCTCTATAATTTTC+TGG | + | Chr7:90942349-90942368 | None:intergenic | 30.0% |
| !! | ATTGCTGATTTGTATGTCAT+AGG | - | Chr7:90942376-90942395 | MsG0780041441.01.T01:CDS | 30.0% |
| ATAAATCAGAAGAGGCTGAA+AGG | - | Chr7:90942401-90942420 | MsG0780041441.01.T01:CDS | 35.0% | |
| CATAGGTGATAAATCAGAAG+AGG | - | Chr7:90942393-90942412 | MsG0780041441.01.T01:CDS | 35.0% | |
| GCAAAGCCAGAAAATTATAG+AGG | - | Chr7:90942340-90942359 | MsG0780041441.01.T01:CDS | 35.0% | |
| GGGTTAAATTTCGACAGAAA+CGG | - | Chr7:90942466-90942485 | MsG0780041441.01.T01:CDS | 35.0% | |
| ! | AAGCAATTTGAGATTGCTGA+GGG | - | Chr7:90942292-90942311 | MsG0780041441.01.T01:CDS | 35.0% |
| !!! | GAACCAGATGTTGTTGTTTT+GGG | - | Chr7:90942241-90942260 | MsG0780041441.01.T01:CDS | 35.0% |
| GAACCCAAAACAACAACATC+TGG | + | Chr7:90942247-90942266 | None:intergenic | 40.0% | |
| TCTGTCGAAATTTAACCCCT+TGG | + | Chr7:90942464-90942483 | None:intergenic | 40.0% | |
| ! | AACATTTGAAACAGGCCAAG+GGG | - | Chr7:90942446-90942465 | MsG0780041441.01.T01:CDS | 40.0% |
| ! | AGCAATTTGAGATTGCTGAG+GGG | - | Chr7:90942293-90942312 | MsG0780041441.01.T01:CDS | 40.0% |
| ! | CAAGCAATTTGAGATTGCTG+AGG | - | Chr7:90942291-90942310 | MsG0780041441.01.T01:CDS | 40.0% |
| ! | GAACATTTGAAACAGGCCAA+GGG | - | Chr7:90942445-90942464 | MsG0780041441.01.T01:CDS | 40.0% |
| !!! | GGAACCAGATGTTGTTGTTT+TGG | - | Chr7:90942240-90942259 | MsG0780041441.01.T01:CDS | 40.0% |
| TTCCTTCTTGTCAGCTTGCA+AGG | - | Chr7:90942264-90942283 | MsG0780041441.01.T01:CDS | 45.0% | |
| ! | GCAATTTGAGATTGCTGAGG+GGG | - | Chr7:90942294-90942313 | MsG0780041441.01.T01:CDS | 45.0% |
| ! | GGAACATTTGAAACAGGCCA+AGG | - | Chr7:90942444-90942463 | MsG0780041441.01.T01:CDS | 45.0% |
| CTCCTTGCAAGCTGACAAGA+AGG | + | Chr7:90942269-90942288 | None:intergenic | 50.0% | |
| !! | GATTGAGCAGGTTCTGAGGA+TGG | - | Chr7:90942318-90942337 | MsG0780041441.01.T01:CDS | 50.0% |
| GGGTGATTGAGCAGGTTCTG+AGG | - | Chr7:90942314-90942333 | MsG0780041441.01.T01:CDS | 55.0% | |
| TGCTGAGGGGGTGATTGAGC+AGG | - | Chr7:90942306-90942325 | MsG0780041441.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 90942199 | 90942498 | 90942199 | ID=MsG0780041441.01;Name=MsG0780041441.01 |
| Chr7 | mRNA | 90942199 | 90942498 | 90942199 | ID=MsG0780041441.01.T01;Parent=MsG0780041441.01;Name=MsG0780041441.01.T01;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|1|1|0|99 |
| Chr7 | exon | 90942199 | 90942498 | 90942199 | ID=MsG0780041441.01.T01:exon:3901;Parent=MsG0780041441.01.T01 |
| Chr7 | CDS | 90942199 | 90942498 | 90942199 | ID=MsG0780041441.01.T01:cds;Parent=MsG0780041441.01.T01 |
| Gene Sequence |
| Protein sequence |
