Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023357.01.T01 | XP_003630080.1 | 68.966 | 145 | 6 | 1 | 10 | 154 | 168 | 273 | 1.16E-56 | 188 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023357.01.T01 | G7LAF7 | 68.966 | 145 | 6 | 1 | 10 | 154 | 168 | 273 | 5.56e-57 | 188 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047791.01 | MsG0480023357.01 | 0.808797 | 2.595312e-50 | 1.497877e-47 |
| MsG0080048404.01 | MsG0480023357.01 | 0.810364 | 1.195941e-50 | 7.194838e-48 |
| MsG0080048856.01 | MsG0480023357.01 | 0.808446 | 3.084956e-50 | 1.764352e-47 |
| MsG0180000209.01 | MsG0480023357.01 | 0.818125 | 2.307246e-52 | 1.712219e-49 |
| MsG0180000210.01 | MsG0480023357.01 | 0.804764 | 1.846773e-49 | 9.602922e-47 |
| MsG0180000470.01 | MsG0480023357.01 | 0.813732 | 2.205531e-51 | 1.451847e-48 |
| MsG0180000568.01 | MsG0480023357.01 | 0.807912 | 4.008602e-50 | 2.260350e-47 |
| MsG0180000777.01 | MsG0480023357.01 | 0.820831 | 5.571177e-53 | 4.456760e-50 |
| MsG0180000982.01 | MsG0480023357.01 | 0.833310 | 5.740020e-56 | 6.585276e-53 |
| MsG0180001285.01 | MsG0480023357.01 | 0.804366 | 2.235761e-49 | 1.150649e-46 |
| MsG0180001886.01 | MsG0480023357.01 | 0.839843 | 1.243201e-57 | 1.738345e-54 |
| MsG0180002547.01 | MsG0480023357.01 | 0.846451 | 2.154229e-59 | 3.709849e-56 |
| MsG0180002794.01 | MsG0480023357.01 | 0.837869 | 4.030410e-57 | 5.305440e-54 |
| MsG0180002895.01 | MsG0480023357.01 | 0.813337 | 2.693885e-51 | 1.754389e-48 |
| MsG0180003669.01 | MsG0480023357.01 | 0.803359 | 3.619694e-49 | 1.815198e-46 |
| MsG0180003671.01 | MsG0480023357.01 | 0.831113 | 2.006759e-55 | 2.156668e-52 |
| MsG0180004152.01 | MsG0480023357.01 | 0.825666 | 4.140312e-54 | 3.798441e-51 |
| MsG0180004389.01 | MsG0480023357.01 | 0.827695 | 1.357412e-54 | 1.320186e-51 |
| MsG0180004465.01 | MsG0480023357.01 | 0.807295 | 5.421344e-50 | 3.008417e-47 |
| MsG0180004481.01 | MsG0480023357.01 | 0.840124 | 1.050578e-57 | 1.482047e-54 |
| MsG0180004482.01 | MsG0480023357.01 | 0.831086 | 2.037000e-55 | 2.187560e-52 |
| MsG0180004509.01 | MsG0480023357.01 | 0.814024 | 1.901844e-51 | 1.261870e-48 |
| MsG0180004725.01 | MsG0480023357.01 | 0.805199 | 1.497706e-49 | 7.875262e-47 |
| MsG0180004765.01 | MsG0480023357.01 | 0.812465 | 4.182981e-51 | 2.661684e-48 |
| MsG0180004779.01 | MsG0480023357.01 | 0.823466 | 1.364679e-53 | 1.175909e-50 |
| MsG0180004928.01 | MsG0480023357.01 | 0.821021 | 5.037552e-53 | 4.051589e-50 |
| MsG0180005334.01 | MsG0480023357.01 | 0.803359 | 3.619266e-49 | 1.814990e-46 |
| MsG0180005575.01 | MsG0480023357.01 | 0.802799 | 4.726068e-49 | 2.336530e-46 |
| MsG0180005668.01 | MsG0480023357.01 | 0.802770 | 4.791935e-49 | 2.367343e-46 |
| MsG0180005799.01 | MsG0480023357.01 | 0.847555 | 1.073899e-59 | 1.916013e-56 |
| MsG0180005990.01 | MsG0480023357.01 | 0.828393 | 9.219830e-55 | 9.152375e-52 |
| MsG0180005993.01 | MsG0480023357.01 | 0.829141 | 6.076742e-55 | 6.165287e-52 |
| MsG0180006155.01 | MsG0480023357.01 | 0.801152 | 1.030265e-48 | 4.885006e-46 |
| MsG0280006299.01 | MsG0480023357.01 | 0.816632 | 5.003123e-52 | 3.563959e-49 |
| MsG0280006405.01 | MsG0480023357.01 | 0.812440 | 4.235964e-51 | 2.693653e-48 |
| MsG0280006422.01 | MsG0480023357.01 | 0.818137 | 2.292914e-52 | 1.702152e-49 |
| MsG0280010595.01 | MsG0480023357.01 | 0.807574 | 4.729353e-50 | 2.643388e-47 |
| MsG0280010776.01 | MsG0480023357.01 | 0.809248 | 2.078397e-50 | 1.214154e-47 |
| MsG0280010778.01 | MsG0480023357.01 | 0.832370 | 9.824950e-56 | 1.095936e-52 |
| MsG0280011049.01 | MsG0480023357.01 | 0.802972 | 4.352666e-49 | 2.161256e-46 |
| MsG0280011109.01 | MsG0480023357.01 | 0.824939 | 6.150705e-54 | 5.527482e-51 |
| MsG0280011156.01 | MsG0480023357.01 | 0.815914 | 7.241724e-52 | 5.058114e-49 |
| MsG0280011371.01 | MsG0480023357.01 | 0.801467 | 8.881532e-49 | 4.244597e-46 |
| MsG0280011388.01 | MsG0480023357.01 | 0.800856 | 1.184232e-48 | 5.573123e-46 |
| MsG0380011581.01 | MsG0480023357.01 | 0.837863 | 4.042631e-57 | 5.320775e-54 |
| MsG0380011609.01 | MsG0480023357.01 | 0.809255 | 2.071356e-50 | 1.210238e-47 |
| MsG0380012460.01 | MsG0480023357.01 | 0.802647 | 5.079873e-49 | 2.501603e-46 |
| MsG0380014173.01 | MsG0480023357.01 | 0.826666 | 2.393136e-54 | 2.259014e-51 |
| MsG0380014248.01 | MsG0480023357.01 | 0.812137 | 4.931651e-51 | 3.110305e-48 |
| MsG0380014537.01 | MsG0480023357.01 | 0.818843 | 1.586551e-52 | 1.200995e-49 |
| MsG0380014876.01 | MsG0480023357.01 | 0.809135 | 2.197682e-50 | 1.279976e-47 |
| MsG0480019416.01 | MsG0480023357.01 | 0.818623 | 1.779941e-52 | 1.339081e-49 |
| MsG0480020447.01 | MsG0480023357.01 | 0.825170 | 5.423029e-54 | 4.905801e-51 |
| MsG0480020907.01 | MsG0480023357.01 | 0.803339 | 3.654219e-49 | 1.831602e-46 |
| MsG0480021215.01 | MsG0480023357.01 | 0.823215 | 1.561557e-53 | 1.336111e-50 |
| MsG0480021451.01 | MsG0480023357.01 | 0.820809 | 5.637950e-53 | 4.507307e-50 |
| MsG0480021465.01 | MsG0480023357.01 | 0.829630 | 4.622078e-55 | 4.757236e-52 |
| MsG0480021706.01 | MsG0480023357.01 | 0.808364 | 3.211026e-50 | 1.832559e-47 |
| MsG0480021750.01 | MsG0480023357.01 | 0.827825 | 1.263129e-54 | 1.233196e-51 |
| MsG0480021994.01 | MsG0480023357.01 | 0.823756 | 1.166813e-53 | 1.013858e-50 |
| MsG0480022164.01 | MsG0480023357.01 | 0.811256 | 7.667076e-51 | 4.723227e-48 |
| MsG0480022223.01 | MsG0480023357.01 | 0.839765 | 1.302619e-57 | 1.816920e-54 |
| MsG0480022696.01 | MsG0480023357.01 | 0.824915 | 6.231209e-54 | 5.596063e-51 |
| MsG0480022711.01 | MsG0480023357.01 | 0.861192 | 1.219157e-63 | 3.420464e-60 |
| MsG0480022750.01 | MsG0480023357.01 | 0.803416 | 3.522723e-49 | 1.769244e-46 |
| MsG0480022795.01 | MsG0480023357.01 | 0.809114 | 2.219916e-50 | 1.292200e-47 |
| MsG0480023055.01 | MsG0480023357.01 | 0.800972 | 1.121354e-48 | 5.292883e-46 |
| MsG0480023221.01 | MsG0480023357.01 | 0.808129 | 3.605105e-50 | 2.044623e-47 |
| MsG0480023355.01 | MsG0480023357.01 | 0.803425 | 3.506882e-49 | 1.761731e-46 |
| MsG0480023356.01 | MsG0480023357.01 | 0.946873 | 2.005064e-105 | 3.379023e-100 |
| MsG0480023357.01 | MsG0480023600.01 | 0.815775 | 7.777033e-52 | 5.412081e-49 |
| MsG0480023357.01 | MsG0480023636.01 | 0.805831 | 1.103945e-49 | 5.899883e-47 |
| MsG0480023357.01 | MsG0480023814.01 | 0.800861 | 1.181290e-48 | 5.559991e-46 |
| MsG0480023357.01 | MsG0480023943.01 | 0.818005 | 2.456003e-52 | 1.816617e-49 |
| MsG0480023357.01 | MsG0480023994.01 | 0.818730 | 1.683104e-52 | 1.270025e-49 |
| MsG0480023357.01 | MsG0580024051.01 | 0.800011 | 1.760269e-48 | 8.107914e-46 |
| MsG0480023357.01 | MsG0580024185.01 | 0.831969 | 1.235097e-55 | 1.361596e-52 |
| MsG0480023357.01 | MsG0580024197.01 | 0.848097 | 7.616706e-60 | 1.382231e-56 |
| MsG0480023357.01 | MsG0580025268.01 | 0.800792 | 1.220534e-48 | 5.734204e-46 |
| MsG0480023357.01 | MsG0580025587.01 | 0.836486 | 9.100566e-57 | 1.148469e-53 |
| MsG0480023357.01 | MsG0580025756.01 | 0.836130 | 1.120767e-56 | 1.399443e-53 |
| MsG0480023357.01 | MsG0580026086.01 | 0.828610 | 8.169231e-55 | 8.160607e-52 |
| MsG0480023357.01 | MsG0580026137.01 | 0.815585 | 8.573327e-52 | 5.934776e-49 |
| MsG0480023357.01 | MsG0580026301.01 | 0.800703 | 1.272536e-48 | 5.964984e-46 |
| MsG0480023357.01 | MsG0580026340.01 | 0.811840 | 5.724695e-51 | 3.581441e-48 |
| MsG0480023357.01 | MsG0580026718.01 | 0.827180 | 1.803320e-54 | 1.727951e-51 |
| MsG0480023357.01 | MsG0580027361.01 | 0.817245 | 3.644742e-52 | 2.640237e-49 |
| MsG0480023357.01 | MsG0580030142.01 | 0.802881 | 4.545932e-49 | 2.252086e-46 |
| MsG0480023357.01 | MsG0680030413.01 | 0.835244 | 1.878000e-56 | 2.283450e-53 |
| MsG0480023357.01 | MsG0680030415.01 | 0.808611 | 2.845075e-50 | 1.634009e-47 |
| MsG0480023357.01 | MsG0680031506.01 | 0.812740 | 3.640659e-51 | 2.333344e-48 |
| MsG0480023357.01 | MsG0680031507.01 | 0.820505 | 6.620547e-53 | 5.248145e-50 |
| MsG0480023357.01 | MsG0680031628.01 | 0.800943 | 1.136592e-48 | 5.360798e-46 |
| MsG0480023357.01 | MsG0680031646.01 | 0.829696 | 4.454336e-55 | 4.593797e-52 |
| MsG0480023357.01 | MsG0680031708.01 | 0.800919 | 1.149757e-48 | 5.419580e-46 |
| MsG0480023357.01 | MsG0680034230.01 | 0.812961 | 3.258098e-51 | 2.100166e-48 |
| MsG0480023357.01 | MsG0680034913.01 | 0.815965 | 7.055773e-52 | 4.935327e-49 |
| MsG0480023357.01 | MsG0680035876.01 | 0.800068 | 1.714232e-48 | 7.907381e-46 |
| MsG0480023357.01 | MsG0680035888.01 | 0.812398 | 4.326016e-51 | 2.747786e-48 |
| MsG0480023357.01 | MsG0780036810.01 | 0.803301 | 3.721774e-49 | 1.863625e-46 |
| MsG0480023357.01 | MsG0780037124.01 | 0.823667 | 1.224564e-53 | 1.061319e-50 |
| MsG0480023357.01 | MsG0780037141.01 | 0.829144 | 6.065132e-55 | 6.154067e-52 |
| MsG0480023357.01 | MsG0780038603.01 | 0.810958 | 8.895996e-51 | 5.437943e-48 |
| MsG0480023357.01 | MsG0780039144.01 | 0.816436 | 5.534846e-52 | 3.921519e-49 |
| MsG0480023357.01 | MsG0780039170.01 | 0.824535 | 7.657247e-54 | 6.801701e-51 |
| MsG0480023357.01 | MsG0780040057.01 | 0.811002 | 8.702554e-51 | 5.326051e-48 |
| MsG0480023357.01 | MsG0780040162.01 | 0.807375 | 5.212187e-50 | 2.898351e-47 |
| MsG0480023357.01 | MsG0780040384.01 | 0.802648 | 5.078354e-49 | 2.500896e-46 |
| MsG0480023357.01 | MsG0780040545.01 | 0.806879 | 6.638717e-50 | 3.644330e-47 |
| MsG0480023357.01 | MsG0780040579.01 | -0.829474 | 5.044374e-55 | 5.168047e-52 |
| MsG0480023357.01 | MsG0780041137.01 | 0.813417 | 2.586426e-51 | 1.688112e-48 |
| MsG0480023357.01 | MsG0780041392.01 | 0.815450 | 9.190190e-52 | 6.338338e-49 |
| MsG0480023357.01 | MsG0780041416.01 | 0.803155 | 3.990161e-49 | 1.990637e-46 |
| MsG0480023357.01 | MsG0780041435.01 | 0.820946 | 5.241229e-53 | 4.206405e-50 |
| MsG0480023357.01 | MsG0780041462.01 | 0.803559 | 3.289978e-49 | 1.658561e-46 |
| MsG0480023357.01 | MsG0880042108.01 | 0.823111 | 1.651014e-53 | 1.408603e-50 |
| MsG0480023357.01 | MsG0880042519.01 | 0.826861 | 2.149674e-54 | 2.040519e-51 |
| MsG0480023357.01 | MsG0880042700.01 | 0.814712 | 1.339692e-51 | 9.055977e-49 |
| MsG0480023357.01 | MsG0880043454.01 | 0.829208 | 5.854389e-55 | 5.952156e-52 |
| MsG0480023357.01 | MsG0880043509.01 | 0.809380 | 1.946830e-50 | 1.141327e-47 |
| MsG0480023357.01 | MsG0880044394.01 | 0.804885 | 1.742429e-49 | 9.089354e-47 |
| MsG0480023357.01 | MsG0880044728.01 | 0.842299 | 2.815407e-58 | 4.250339e-55 |
| MsG0480023357.01 | MsG0880044975.01 | 0.820074 | 8.312008e-53 | 6.511432e-50 |
| MsG0480023357.01 | MsG0880045017.01 | 0.818694 | 1.715101e-52 | 1.292868e-49 |
| MsG0480023357.01 | MsG0880045111.01 | 0.807666 | 4.521466e-50 | 2.533316e-47 |
| MsG0480023357.01 | MsG0880045145.01 | 0.802854 | 4.604640e-49 | 2.279637e-46 |
| MsG0480023357.01 | MsG0880045362.01 | 0.818952 | 1.498430e-52 | 1.137788e-49 |
| MsG0480023357.01 | MsG0880045371.01 | 0.800713 | 1.266527e-48 | 5.938335e-46 |
| MsG0480023357.01 | MsG0880045535.01 | 0.826320 | 2.894325e-54 | 2.705201e-51 |
| MsG0480023357.01 | MsG0880045613.01 | 0.803386 | 3.574314e-49 | 1.793716e-46 |
| MsG0480023357.01 | MsG0880045736.01 | 0.827925 | 1.194998e-54 | 1.170107e-51 |
| MsG0480023357.01 | MsG0880045765.01 | 0.801645 | 8.166197e-49 | 3.920196e-46 |
| MsG0480023357.01 | MsG0880045937.01 | 0.809526 | 1.811931e-50 | 1.066318e-47 |
| MsG0480023357.01 | MsG0880045965.01 | 0.805729 | 1.159786e-49 | 6.182409e-47 |
| MsG0480023357.01 | MsG0880046620.01 | 0.820481 | 6.706005e-53 | 5.312233e-50 |
| MsG0480023357.01 | MsG0880047052.01 | 0.807296 | 5.418655e-50 | 3.007007e-47 |
| MsG0480023357.01 | MsG0880047427.01 | 0.814432 | 1.545207e-51 | 1.036687e-48 |
| MsG0480023357.01 | MsG0880047473.01 | 0.812504 | 4.100621e-51 | 2.611849e-48 |
| MsG0480023357.01 | MsG0880047764.01 | 0.838035 | 3.652551e-57 | 4.832729e-54 |
| MsG0380015027.01 | MsG0480023357.01 | 0.808643 | 2.800488e-50 | 1.609755e-47 |
| MsG0380015435.01 | MsG0480023357.01 | 0.815961 | 7.066990e-52 | 4.942679e-49 |
| MsG0380015440.01 | MsG0480023357.01 | 0.802471 | 5.521794e-49 | 2.707143e-46 |
| MsG0380015555.01 | MsG0480023357.01 | 0.819327 | 1.230819e-52 | 9.441768e-50 |
| MsG0380015720.01 | MsG0480023357.01 | 0.803300 | 3.724009e-49 | 1.864693e-46 |
| MsG0380015778.01 | MsG0480023357.01 | 0.811983 | 5.328755e-51 | 3.346572e-48 |
| MsG0380016067.01 | MsG0480023357.01 | 0.840349 | 9.173865e-58 | 1.303116e-54 |
| MsG0380016133.01 | MsG0480023357.01 | 0.850564 | 1.564710e-60 | 3.077628e-57 |
| MsG0380016529.01 | MsG0480023357.01 | 0.805154 | 1.530798e-49 | 8.039957e-47 |
| MsG0380016559.01 | MsG0480023357.01 | 0.829005 | 6.555994e-55 | 6.624492e-52 |
| MsG0380016560.01 | MsG0480023357.01 | 0.840310 | 9.391940e-58 | 1.332419e-54 |
| MsG0380016860.01 | MsG0480023357.01 | 0.823977 | 1.035587e-53 | 9.053740e-51 |
| MsG0380016910.01 | MsG0480023357.01 | 0.816618 | 5.040655e-52 | 3.589311e-49 |
| MsG0380016970.01 | MsG0480023357.01 | 0.823335 | 1.464058e-53 | 1.256880e-50 |
| MsG0380017198.01 | MsG0480023357.01 | 0.802451 | 5.576514e-49 | 2.732537e-46 |
| MsG0380017543.01 | MsG0480023357.01 | 0.824912 | 6.239743e-54 | 5.603298e-51 |
| MsG0380018033.01 | MsG0480023357.01 | 0.809353 | 1.973423e-50 | 1.156094e-47 |
| MsG0380018044.01 | MsG0480023357.01 | 0.839740 | 1.322433e-57 | 1.843155e-54 |
| MsG0480018110.01 | MsG0480023357.01 | 0.828504 | 8.664187e-55 | 8.628693e-52 |
| MsG0480018163.01 | MsG0480023357.01 | 0.811318 | 7.431931e-51 | 4.585732e-48 |
| MsG0480018214.01 | MsG0480023357.01 | 0.820516 | 6.581003e-53 | 5.218234e-50 |
| MsG0280006461.01 | MsG0480023357.01 | 0.826628 | 2.444292e-54 | 2.304682e-51 |
| MsG0280006483.01 | MsG0480023357.01 | 0.805729 | 1.159786e-49 | 6.182409e-47 |
| MsG0280006491.01 | MsG0480023357.01 | 0.800313 | 1.527990e-48 | 7.092576e-46 |
| MsG0280006593.01 | MsG0480023357.01 | 0.854991 | 8.508156e-62 | 1.935316e-58 |
| MsG0280006678.01 | MsG0480023357.01 | 0.851568 | 8.156261e-61 | 1.657733e-57 |
| MsG0280007153.01 | MsG0480023357.01 | 0.807663 | 4.528971e-50 | 2.537258e-47 |
| MsG0280007527.01 | MsG0480023357.01 | 0.800182 | 1.625135e-48 | 7.517882e-46 |
| MsG0280007575.01 | MsG0480023357.01 | 0.807603 | 4.661952e-50 | 2.607696e-47 |
| MsG0280007727.01 | MsG0480023357.01 | 0.815277 | 1.003912e-51 | 6.890995e-49 |
| MsG0280007955.01 | MsG0480023357.01 | 0.843713 | 1.182893e-58 | 1.866792e-55 |
| MsG0280008112.01 | MsG0480023357.01 | 0.818812 | 1.612582e-52 | 1.219550e-49 |
| MsG0280008114.01 | MsG0480023357.01 | 0.801182 | 1.016002e-48 | 4.820824e-46 |
| MsG0280008429.01 | MsG0480023357.01 | 0.822727 | 2.028828e-53 | 1.712250e-50 |
| MsG0280008696.01 | MsG0480023357.01 | 0.812238 | 4.688251e-51 | 2.964966e-48 |
| MsG0280009024.01 | MsG0480023357.01 | 0.812570 | 3.967488e-51 | 2.531377e-48 |
| MsG0280009575.01 | MsG0480023357.01 | 0.810051 | 1.396538e-50 | 8.333414e-48 |
| MsG0280009578.01 | MsG0480023357.01 | 0.824140 | 9.486512e-54 | 8.331751e-51 |
| MsG0280010013.01 | MsG0480023357.01 | 0.812521 | 4.065381e-51 | 2.590629e-48 |
| MsG0280010233.01 | MsG0480023357.01 | 0.845374 | 4.227546e-59 | 7.030475e-56 |
| MsG0280010434.01 | MsG0480023357.01 | 0.846671 | 1.875514e-59 | 3.253015e-56 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023357.01.T01 | MTR_8g091510 | 68.966 | 145 | 6 | 1 | 10 | 154 | 168 | 273 | 1.41e-60 | 188 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023357.01.T01 | AT5G10070 | 42.857 | 140 | 38 | 2 | 10 | 146 | 157 | 257 | 4.12e-23 | 92.0 |
Find 35 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGCTTGGCAAGTTTAAC+TGG | 0.229226 | 4:+84147659 | MsG0480023356.01.T01:CDS |
| AAATGATAAAGTAAATAATT+TGG | 0.266881 | 4:-84149158 | None:intergenic |
| CTCTAACCATGCTGCGATAC+TGG | 0.303027 | 4:+84148915 | MsG0480023356.01.T01:exon |
| TTATTGAAATGAAAACTATT+TGG | 0.307741 | 4:+84147587 | MsG0480023356.01.T01:intron |
| AAATAATTTCAGCACTGTTT+TGG | 0.333601 | 4:-84148467 | None:intergenic |
| TTATTTCTGTTCAAAATGAT+TGG | 0.353309 | 4:+84148484 | MsG0480023356.01.T01:CDS |
| CTGCGATACTGGAATCAATA+TGG | 0.360424 | 4:+84148926 | MsG0480023356.01.T01:exon |
| CTCTTCATCACTATTGTCTA+TGG | 0.381809 | 4:-84148854 | None:intergenic |
| AACTCTTCCGATTCTGATGA+TGG | 0.381819 | 4:+84148796 | MsG0480023356.01.T01:exon |
| TCACTATCAGTAGGAGCCTT+TGG | 0.382863 | 4:-84148528 | None:intergenic |
| CCTTCAGTAATTCCCTGTAT+TGG | 0.387471 | 4:-84148431 | None:intergenic |
| TTGGCTATCACAAGCGCGTC+AGG | 0.460396 | 4:+84148503 | MsG0480023356.01.T01:CDS |
| AGCTGAGATATGCATCGTCT+TGG | 0.461211 | 4:+84148989 | MsG0480023356.01.T01:exon |
| GTTGCTTGGCAAGTTTAACT+GGG | 0.464029 | 4:+84147660 | MsG0480023356.01.T01:CDS |
| GCTGAGATATGCATCGTCTT+GGG | 0.486978 | 4:+84148990 | MsG0480023356.01.T01:exon |
| TATGCTGCATGGCAGTTGTT+AGG | 0.502876 | 4:+84148749 | MsG0480023356.01.T01:intron |
| TGGAAGCCCATCATCAGAAT+CGG | 0.511595 | 4:-84148803 | None:intergenic |
| TTCTTTGCTATATCTTGCAG+TGG | 0.518716 | 4:+84147616 | MsG0480023356.01.T01:intron |
| GAAACAGCAAATCTGTTGCT+TGG | 0.521180 | 4:+84147646 | MsG0480023356.01.T01:CDS |
| TTTCACTTATGATATTTACA+AGG | 0.521917 | 4:+84147764 | MsG0480023356.01.T01:intron |
| ATGGGCTTCCACCTCTTGAA+AGG | 0.540522 | 4:+84148815 | MsG0480023356.01.T01:exon |
| TTCATGTTCCTTTCAAGAGG+TGG | 0.548622 | 4:-84148823 | None:intergenic |
| ACTCTTCCGATTCTGATGAT+GGG | 0.551069 | 4:+84148797 | MsG0480023356.01.T01:exon |
| TGATTCATGTTCCTTTCAAG+AGG | 0.557002 | 4:-84148826 | None:intergenic |
| TTCACTTATGATATTTACAA+GGG | 0.562228 | 4:+84147765 | MsG0480023356.01.T01:intron |
| TGAAAATTACAGAAACATCA+AGG | 0.577569 | 4:-84149113 | None:intergenic |
| TTAATGTATAAGAGAAACGC+TGG | 0.584564 | 4:-84149026 | None:intergenic |
| TTGCTTGGCAAGTTTAACTG+GGG | 0.613832 | 4:+84147661 | MsG0480023356.01.T01:CDS |
| AAACATCAAGGCCTCACAGA+GGG | 0.624939 | 4:-84149101 | None:intergenic |
| CCAATACAGGGAATTACTGA+AGG | 0.625012 | 4:+84148431 | MsG0480023356.01.T01:intron |
| ACAAGCGCGTCAGGTTCCAA+AGG | 0.626008 | 4:+84148512 | MsG0480023356.01.T01:CDS |
| TTGATTCCAGTATCGCAGCA+TGG | 0.640776 | 4:-84148921 | None:intergenic |
| CACAGACCTTCACTATCAGT+AGG | 0.664914 | 4:-84148537 | None:intergenic |
| AAGGCTCCTACTGATAGTGA+AGG | 0.667476 | 4:+84148531 | MsG0480023356.01.T01:CDS |
| GAAACATCAAGGCCTCACAG+AGG | 0.751301 | 4:-84149102 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTGATTCTCAATTATAT+GGG | + | Chr4:84148370-84148389 | MsG0480023356.01.T01:intron | 15.0% |
| !! | ATATAATTGAGAATCAAATT+CGG | - | Chr4:84148370-84148389 | None:intergenic | 15.0% |
| !!! | TGTTATATATCTATTTTACA+CGG | + | Chr4:84148562-84148581 | MsG0480023356.01.T01:intron | 15.0% |
| !!! | TTAACAAAAAAATTTGTTCA+TGG | - | Chr4:84148034-84148053 | None:intergenic | 15.0% |
| !! | AAAAATTCACAATATATCAG+AGG | - | Chr4:84148707-84148726 | None:intergenic | 20.0% |
| !! | ATTTGATTCTCAATTATATG+GGG | + | Chr4:84148371-84148390 | MsG0480023356.01.T01:intron | 20.0% |
| !! | CTTATAAATATGCTTCATAA+AGG | - | Chr4:84147947-84147966 | None:intergenic | 20.0% |
| !! | GAATTTGATTCTCAATTATA+TGG | + | Chr4:84148369-84148388 | MsG0480023356.01.T01:intron | 20.0% |
| !! | TAGTTATGTATAGATAACTA+GGG | + | Chr4:84148088-84148107 | MsG0480023356.01.T01:intron | 20.0% |
| !! | TTAGTTATGTATAGATAACT+AGG | + | Chr4:84148087-84148106 | MsG0480023356.01.T01:intron | 20.0% |
| !! | TTCACTTATGATATTTACAA+GGG | + | Chr4:84147765-84147784 | MsG0480023356.01.T01:intron | 20.0% |
| !! | TTTCACTTATGATATTTACA+AGG | + | Chr4:84147764-84147783 | MsG0480023356.01.T01:intron | 20.0% |
| !!! | GTTATATATCTATTTTACAC+GGG | + | Chr4:84148563-84148582 | MsG0480023356.01.T01:intron | 20.0% |
| !!! | TTATATATCTATTTTACACG+GGG | + | Chr4:84148564-84148583 | MsG0480023356.01.T01:intron | 20.0% |
| !!! | TTATTTCTGTTCAAAATGAT+TGG | + | Chr4:84148484-84148503 | MsG0480023356.01.T01:CDS | 20.0% |
| !!! | TTTTTATATCATGAACTACA+AGG | - | Chr4:84147886-84147905 | None:intergenic | 20.0% |
| ! | AAGTTATGTAAGTTACGTTA+CGG | - | Chr4:84147915-84147934 | None:intergenic | 25.0% |
| ! | CATATTAGATCTCTCAATTA+AGG | - | Chr4:84148199-84148218 | None:intergenic | 25.0% |
| ! | GTTAAATGAAAAAAGCAACA+GGG | + | Chr4:84147830-84147849 | MsG0480023356.01.T01:intron | 25.0% |
| ! | TAATTCCAGTATTCATTTGT+AGG | - | Chr4:84147992-84148011 | None:intergenic | 25.0% |
| ! | TGAAAATTACAGAAACATCA+AGG | - | Chr4:84149116-84149135 | None:intergenic | 25.0% |
| ! | TGTTAAATGAAAAAAGCAAC+AGG | + | Chr4:84147829-84147848 | MsG0480023356.01.T01:intron | 25.0% |
| !! | AAATAATTTCAGCACTGTTT+TGG | - | Chr4:84148470-84148489 | None:intergenic | 25.0% |
| !! | AACTTTCTTTTAACCAATAC+AGG | + | Chr4:84148418-84148437 | MsG0480023356.01.T01:intron | 25.0% |
| !! | ACTTTCTTTTAACCAATACA+GGG | + | Chr4:84148419-84148438 | MsG0480023356.01.T01:intron | 25.0% |
| !!! | ATATTTTCACTTTGCTATCT+AGG | + | Chr4:84147737-84147756 | MsG0480023356.01.T01:intron | 25.0% |
| !!! | ATTTGTTTTTAATCTGACAC+TGG | + | Chr4:84148886-84148905 | MsG0480023356.01.T01:exon | 25.0% |
| !!! | CTTTTTTCATTTAACAGTGT+GGG | - | Chr4:84147825-84147844 | None:intergenic | 25.0% |
| ATCAGATACAAGAGTAATCA+AGG | - | Chr4:84148166-84148185 | None:intergenic | 30.0% | |
| CGAAACAATTGGAATGAATT+TGG | - | Chr4:84148314-84148333 | None:intergenic | 30.0% | |
| TAGATAAAAGATTGAACGCA+TGG | - | Chr4:84148614-84148633 | None:intergenic | 30.0% | |
| TCAGATACAAGAGTAATCAA+GGG | - | Chr4:84148165-84148184 | None:intergenic | 30.0% | |
| TTAATGTATAAGAGAAACGC+TGG | - | Chr4:84149029-84149048 | None:intergenic | 30.0% | |
| TTTCATGGAAACGAAACAAT+TGG | - | Chr4:84148325-84148344 | None:intergenic | 30.0% | |
| ! | GAATGAATTTGGTTCACAAT+TGG | - | Chr4:84148303-84148322 | None:intergenic | 30.0% |
| !!! | GCTTTTTTCATTTAACAGTG+TGG | - | Chr4:84147826-84147845 | None:intergenic | 30.0% |
| AAGGTTCGAAAGAAATCAAG+AGG | - | Chr4:84147867-84147886 | None:intergenic | 35.0% | |
| AGGTTCGAAAGAAATCAAGA+GGG | - | Chr4:84147866-84147885 | None:intergenic | 35.0% | |
| CAGATACAAGAGTAATCAAG+GGG | - | Chr4:84148164-84148183 | None:intergenic | 35.0% | |
| CAGTACCTACAAATGAATAC+TGG | + | Chr4:84147984-84148003 | MsG0480023356.01.T01:intron | 35.0% | |
| CTCTTCATCACTATTGTCTA+TGG | - | Chr4:84148857-84148876 | None:intergenic | 35.0% | |
| CTGTGAACTAAAGGAGTTTA+TGG | + | Chr4:84148268-84148287 | MsG0480023356.01.T01:intron | 35.0% | |
| TGATTCATGTTCCTTTCAAG+AGG | - | Chr4:84148829-84148848 | None:intergenic | 35.0% | |
| ! | TAAACTCCTTTAGTTCACAG+TGG | - | Chr4:84148268-84148287 | None:intergenic | 35.0% |
| ! | TTCTTTGCTATATCTTGCAG+TGG | + | Chr4:84147616-84147635 | MsG0480023356.01.T01:intron | 35.0% |
| !!! | ACTGTTTTGGCATTTAGAGT+AGG | - | Chr4:84148457-84148476 | None:intergenic | 35.0% |
| AAAGAAATCAAGAGGGACTC+TGG | - | Chr4:84147859-84147878 | None:intergenic | 40.0% | |
| AACTCTTCCGATTCTGATGA+TGG | + | Chr4:84148796-84148815 | MsG0480023356.01.T01:exon | 40.0% | |
| AAGAAATCAAGAGGGACTCT+GGG | - | Chr4:84147858-84147877 | None:intergenic | 40.0% | |
| ACTCTTCCGATTCTGATGAT+GGG | + | Chr4:84148797-84148816 | MsG0480023356.01.T01:exon | 40.0% | |
| CATGTTAGACACGGATTTCA+TGG | - | Chr4:84148340-84148359 | None:intergenic | 40.0% | |
| CCAATACAGGGAATTACTGA+AGG | + | Chr4:84148431-84148450 | MsG0480023356.01.T01:intron | 40.0% | |
| CCTAACAATCATAGCTAGTG+AGG | - | Chr4:84148114-84148133 | None:intergenic | 40.0% | |
| CCTCACTAGCTATGATTGTT+AGG | + | Chr4:84148111-84148130 | MsG0480023356.01.T01:intron | 40.0% | |
| CCTTCAGTAATTCCCTGTAT+TGG | - | Chr4:84148434-84148453 | None:intergenic | 40.0% | |
| CTGCGATACTGGAATCAATA+TGG | + | Chr4:84148926-84148945 | MsG0480023356.01.T01:exon | 40.0% | |
| GAAACAGCAAATCTGTTGCT+TGG | + | Chr4:84147646-84147665 | MsG0480023356.01.T01:CDS | 40.0% | |
| GTACAGTGAAATTGTGTGCT+AGG | - | Chr4:84148225-84148244 | None:intergenic | 40.0% | |
| GTGAAACCACTGTGAACTAA+AGG | + | Chr4:84148259-84148278 | MsG0480023356.01.T01:intron | 40.0% | |
| GTTGCTTGGCAAGTTTAACT+GGG | + | Chr4:84147660-84147679 | MsG0480023356.01.T01:CDS | 40.0% | |
| TTCATGGCTACATACAGAGA+TGG | - | Chr4:84148018-84148037 | None:intergenic | 40.0% | |
| TTCATGTTCCTTTCAAGAGG+TGG | - | Chr4:84148826-84148845 | None:intergenic | 40.0% | |
| TTGCTTGGCAAGTTTAACTG+GGG | + | Chr4:84147661-84147680 | MsG0480023356.01.T01:CDS | 40.0% | |
| ! | ACATGTATTTTCCCTCTGTG+AGG | + | Chr4:84149090-84149109 | MsG0480023356.01.T01:exon | 40.0% |
| ! | TGTTGCTTGGCAAGTTTAAC+TGG | + | Chr4:84147659-84147678 | MsG0480023356.01.T01:CDS | 40.0% |
| !! | CTATTTTACACGGGGTGTTA+TGG | + | Chr4:84148572-84148591 | MsG0480023356.01.T01:intron | 40.0% |
| !!! | TTTTTTCCTCCTATGCTGCA+TGG | + | Chr4:84148738-84148757 | MsG0480023356.01.T01:intron | 40.0% |
| AAACATCAAGGCCTCACAGA+GGG | - | Chr4:84149104-84149123 | None:intergenic | 45.0% | |
| AGCTGAGATATGCATCGTCT+TGG | + | Chr4:84148989-84149008 | MsG0480023356.01.T01:exon | 45.0% | |
| CACAGACCTTCACTATCAGT+AGG | - | Chr4:84148540-84148559 | None:intergenic | 45.0% | |
| GAGTAATCAAGGGGCTAATC+AGG | - | Chr4:84148155-84148174 | None:intergenic | 45.0% | |
| GCTGAGATATGCATCGTCTT+GGG | + | Chr4:84148990-84149009 | MsG0480023356.01.T01:exon | 45.0% | |
| GGTGAATCGCATGTTAGACA+CGG | - | Chr4:84148349-84148368 | None:intergenic | 45.0% | |
| GTTGCATACATTGTCTGTGC+AGG | + | Chr4:84148652-84148671 | MsG0480023356.01.T01:intron | 45.0% | |
| TAACAACTGCCATGCAGCAT+AGG | - | Chr4:84148750-84148769 | None:intergenic | 45.0% | |
| TATGCTGCATGGCAGTTGTT+AGG | + | Chr4:84148749-84148768 | MsG0480023356.01.T01:intron | 45.0% | |
| TCACTATCAGTAGGAGCCTT+TGG | - | Chr4:84148531-84148550 | None:intergenic | 45.0% | |
| TGGAAGCCCATCATCAGAAT+CGG | - | Chr4:84148806-84148825 | None:intergenic | 45.0% | |
| TTGATTCCAGTATCGCAGCA+TGG | - | Chr4:84148924-84148943 | None:intergenic | 45.0% | |
| ! | AAGGCTCCTACTGATAGTGA+AGG | + | Chr4:84148531-84148550 | MsG0480023356.01.T01:CDS | 45.0% |
| ! | GGGGTGTTATGGTATGAAGT+TGG | + | Chr4:84148583-84148602 | MsG0480023356.01.T01:intron | 45.0% |
| AGGGGCTAATCAGGAGCTAA+TGG | - | Chr4:84148146-84148165 | None:intergenic | 50.0% | |
| ATGGGCTTCCACCTCTTGAA+AGG | + | Chr4:84148815-84148834 | MsG0480023356.01.T01:exon | 50.0% | |
| CTCTAACCATGCTGCGATAC+TGG | + | Chr4:84148915-84148934 | MsG0480023356.01.T01:exon | 50.0% | |
| GAAACATCAAGGCCTCACAG+AGG | - | Chr4:84149105-84149124 | None:intergenic | 50.0% | |
| ACAAGCGCGTCAGGTTCCAA+AGG | + | Chr4:84148512-84148531 | MsG0480023356.01.T01:CDS | 55.0% | |
| CAACTGCCATGCAGCATAGG+AGG | - | Chr4:84148747-84148766 | None:intergenic | 55.0% | |
| TTGGCTATCACAAGCGCGTC+AGG | + | Chr4:84148503-84148522 | MsG0480023356.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 84147595 | 84149168 | 84147595 | ID=MsG0480023357.01;Name=MsG0480023357.01 |
| Chr4 | mRNA | 84147595 | 84149168 | 84147595 | ID=MsG0480023357.01.T01;Parent=MsG0480023357.01;Name=MsG0480023357.01.T01;_AED=0.46;_eAED=0.55;_QI=0|0.5|0.33|1|0.5|0.33|3|283|154 |
| Chr4 | exon | 84147595 | 84147786 | 84147595 | ID=MsG0480023357.01.T01:exon:2628;Parent=MsG0480023357.01.T01 |
| Chr4 | exon | 84148402 | 84148552 | 84148402 | ID=MsG0480023357.01.T01:exon:2629;Parent=MsG0480023357.01.T01 |
| Chr4 | exon | 84148764 | 84149168 | 84148764 | ID=MsG0480023357.01.T01:exon:2630;Parent=MsG0480023357.01.T01 |
| Chr4 | CDS | 84147595 | 84147786 | 84147595 | ID=MsG0480023357.01.T01:cds;Parent=MsG0480023357.01.T01 |
| Chr4 | CDS | 84148402 | 84148552 | 84148402 | ID=MsG0480023357.01.T01:cds;Parent=MsG0480023357.01.T01 |
| Chr4 | CDS | 84148764 | 84148885 | 84148764 | ID=MsG0480023357.01.T01:cds;Parent=MsG0480023357.01.T01 |
| Chr4 | three_prime_UTR | 84148886 | 84149168 | 84148886 | ID=MsG0480023357.01.T01:three_prime_utr;Parent=MsG0480023357.01.T01 |
| Gene Sequence |
| Protein sequence |
