AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042108.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042108.01.T01 MTR_8g011890 100.000 79 0 0 1 79 1 79 4.14e-53 162
MsG0880042108.01.T02 MTR_8g011890 97.143 35 1 0 41 75 80 114 1.68e-17 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042108.01.T01 AT5G09920 94.937 79 4 0 1 79 1 79 4.99e-50 154
MsG0880042108.01.T02 AT5G09920 82.857 35 6 0 41 75 80 114 3.44e-15 67.4

Find 79 sgRNAs with CRISPR-Local

Find 513 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTGAAGTTTCATTAATTC+TGG 0.198654 8:+3781126 MsG0880042108.01.T01:CDS
ATTGTTGATTATGAGAAATT+TGG 0.206941 8:+3788303 MsG0880042108.01.T02:CDS
ATAGCTTCCTCTACAGTTTC+CGG 0.224138 8:-3782385 None:intergenic
GAATCATGAGAAATAGAAAA+TGG 0.239901 8:-3781659 None:intergenic
TATCAGATTGTGATCTTAAC+TGG 0.275806 8:+3782172 MsG0880042108.01.T01:three_prime_UTR
ATAAGAGGAGGAATCTTAAA+TGG 0.279690 8:-3782037 None:intergenic
GAAGAAAGGAACACTTGTTT+TGG 0.281671 8:-3780008 None:intergenic
ATTATTTCTACCTTGATAGA+TGG 0.299795 8:-3782418 None:intergenic
TGGGTTCATCAGCTCAATTT+TGG 0.327056 8:-3781639 None:intergenic
TAACCATGATTTACAAGAAC+TGG 0.352577 8:-3783465 None:intergenic
TTTGATGAATCTGAGAAATC+TGG 0.371246 8:+3788252 MsG0880042108.01.T02:CDS
CTTCCAGTTCTTGTAAATCA+TGG 0.375167 8:+3783462 MsG0880042108.01.T01:three_prime_UTR
ACTTAAATGAAAATTGTGTT+GGG 0.381011 8:+3781690 MsG0880042108.01.T01:three_prime_UTR
ACTTAAATGAAAATTGTGTT+GGG 0.381011 8:+3781744 MsG0880042108.01.T01:intron
TAGCTTCCTCTACAGTTTCC+GGG 0.391236 8:-3782384 None:intergenic
CATGTTTGGTTTAAGATAAG+AGG 0.394195 8:-3782052 None:intergenic
ATATCAGTTGGCTGAATTTG+AGG 0.404625 8:+3782213 MsG0880042108.01.T01:three_prime_UTR
TTCTCCTATCTGCATCAAAT+GGG 0.406277 8:+3783703 MsG0880042108.01.T01:three_prime_UTR
ATTCTCCTATCTGCATCAAA+TGG 0.408220 8:+3783702 MsG0880042108.01.T01:three_prime_UTR
TTAAGATCACAATCTGATAC+AGG 0.409600 8:-3782168 None:intergenic
TCACTGAGAAACTTGATTCA+TGG 0.413264 8:-3781188 None:intergenic
TACTTAAATGAAAATTGTGT+TGG 0.417095 8:+3781689 MsG0880042108.01.T01:three_prime_UTR
TACTTAAATGAAAATTGTGT+TGG 0.417095 8:+3781743 MsG0880042108.01.T01:intron
GATTATGAGAAATTTGGAAT+TGG 0.418909 8:+3788309 MsG0880042108.01.T02:CDS
ATTTGGGGAATTTAGAGATT+GGG 0.434777 8:+3788200 MsG0880042108.01.T02:intron
ATTTGGAATTGGATTGAAGA+AGG 0.447381 8:+3788320 MsG0880042108.01.T02:CDS
CGAACTTGTCTAACAGCATC+AGG 0.447560 8:-3781606 None:intergenic
TTGAGAGTTGCTGAAGGGGA+GGG 0.451196 8:+3781876 MsG0880042108.01.T01:three_prime_UTR
AAGAAGGAGTGAATCATGTC+TGG 0.463358 8:+3780196 MsG0880042108.01.T01:exon
ACAAGTGTTCCTTTCTTCCC+AGG 0.468818 8:+3780013 MsG0880042108.01.T01:five_prime_UTR
TTATTGCAGCTGTGTGTCCT+AGG 0.470406 8:+3782352 MsG0880042108.01.T01:intron
CGAGGAGGATTTGATAGAGA+TGG 0.470530 8:+3783605 MsG0880042108.01.T01:three_prime_UTR
TGAGAGTTGCTGAAGGGGAG+GGG 0.472125 8:+3781877 MsG0880042108.01.T01:three_prime_UTR
TTCAGCAACTCTCAACTAAA+CGG 0.474414 8:-3781868 None:intergenic
TGACGTTCACCTGGGAAGAA+AGG 0.482659 8:-3780022 None:intergenic
ATATTACGTAGGGGTCCGTT+TGG 0.486892 8:-3782105 None:intergenic
TTGGGAAGACAAGATATTTG+AGG 0.488739 8:+3788218 MsG0880042108.01.T02:CDS
CGTACTAACCGGAATCAAAA+CGG 0.489079 8:-3780067 None:intergenic
GTGAATCATGTCTGGAGAAG+AGG 0.498449 8:+3780204 MsG0880042108.01.T01:exon
GCAGACAAGAGGACGGGCTC+AGG 0.499865 8:+3783374 MsG0880042108.01.T01:intron
GTTGAGAGTTGCTGAAGGGG+AGG 0.502174 8:+3781875 MsG0880042108.01.T01:three_prime_UTR
AATCATGAGAAATAGAAAAT+GGG 0.503533 8:-3781658 None:intergenic
TTTGCTTCCCCTCAAATTGG+GGG 0.516067 8:+3781979 MsG0880042108.01.T01:three_prime_UTR
AACGCCGCTGAACTCAAAAT+CGG 0.516766 8:+3780232 MsG0880042108.01.T01:CDS
TGCTATGGTTCCATCTATCA+AGG 0.518144 8:+3782408 MsG0880042108.01.T01:three_prime_UTR
TCTCCCTTCGTTGAACCAAA+CGG 0.538281 8:+3782090 MsG0880042108.01.T01:three_prime_UTR
ATAGAAAGAGATATTACGTA+GGG 0.539466 8:-3782115 None:intergenic
TTGCTTCCCCTCAAATTGGG+GGG 0.542878 8:+3781980 MsG0880042108.01.T01:three_prime_UTR
GATTTGATAGAGATGGTTTG+TGG 0.550383 8:+3783612 MsG0880042108.01.T01:three_prime_UTR
AGTTATTGCAGAACTCATGT+TGG 0.556422 8:+3783553 MsG0880042108.01.T01:three_prime_UTR
TTACTGAATTCAGCAGAAGA+AGG 0.561152 8:+3780180 MsG0880042108.01.T01:intron
CTTAAATGAAAATTGTGTTG+GGG 0.563938 8:+3781691 MsG0880042108.01.T01:three_prime_UTR
CTTAAATGAAAATTGTGTTG+GGG 0.565743 8:+3781745 MsG0880042108.01.T01:intron
TGTCCTAGGCAATCTTTGCC+CGG 0.566090 8:+3782366 MsG0880042108.01.T01:three_prime_UTR
CTCCTATCTGCATCAAATGG+GGG 0.567678 8:+3783705 MsG0880042108.01.T01:three_prime_UTR
GGTCCGTTTGGTTCAACGAA+GGG 0.568503 8:-3782093 None:intergenic
AATTCTCGCTAGATATCAGT+TGG 0.570014 8:+3782201 MsG0880042108.01.T01:three_prime_UTR
CAAAACGGTGAGAGAAGTTG+AGG 0.574218 8:-3780052 None:intergenic
AAAACGGTGAGAGAAGTTGA+GGG 0.576948 8:-3780051 None:intergenic
TGACATGCAGACAAGAGGAC+GGG 0.581736 8:+3783368 MsG0880042108.01.T01:intron
TTTAGTTGAGAGTTGCTGAA+GGG 0.585915 8:+3781871 MsG0880042108.01.T01:three_prime_UTR
TTGACATGCAGACAAGAGGA+CGG 0.587911 8:+3783367 MsG0880042108.01.T01:intron
GTTTGGTTTAAGATAAGAGG+AGG 0.589839 8:-3782049 None:intergenic
TGTAGAGGAAGCTATTGCTA+TGG 0.591535 8:+3782393 MsG0880042108.01.T01:three_prime_UTR
TCTCCTATCTGCATCAAATG+GGG 0.595420 8:+3783704 MsG0880042108.01.T01:three_prime_UTR
TTTCCGGGCAAAGATTGCCT+AGG 0.601682 8:-3782369 None:intergenic
TTAGTTGAGAGTTGCTGAAG+GGG 0.603051 8:+3781872 MsG0880042108.01.T01:three_prime_UTR
GTTCTGTGATGTACTGTAAG+TGG 0.610538 8:+3783488 MsG0880042108.01.T01:three_prime_UTR
TCCTATCTGCATCAAATGGG+GGG 0.621927 8:+3783706 MsG0880042108.01.T01:three_prime_UTR
GATAGAAAGAGATATTACGT+AGG 0.624357 8:-3782116 None:intergenic
GTTTAGTTGAGAGTTGCTGA+AGG 0.632152 8:+3781870 MsG0880042108.01.T01:three_prime_UTR
TGCATGAGACTGTGTGTGGT+AGG 0.637244 8:+3783635 MsG0880042108.01.T01:three_prime_UTR
TCTTTGCCCGGAAACTGTAG+AGG 0.638263 8:+3782378 MsG0880042108.01.T01:three_prime_UTR
GGGTCCGTTTGGTTCAACGA+AGG 0.658999 8:-3782094 None:intergenic
TAAGATCACAATCTGATACA+GGG 0.668814 8:-3782167 None:intergenic
GCTGAACTCAAAATCGGAGA+CGG 0.670972 8:+3780238 MsG0880042108.01.T01:CDS
GTGGTGCATGAGACTGTGTG+TGG 0.710236 8:+3783631 MsG0880042108.01.T01:three_prime_UTR
CGGACCCTAAAAGCAAACAC+AGG 0.713514 8:-3781848 None:intergenic
TAGAAAGAGATATTACGTAG+GGG 0.756748 8:-3782114 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTATTCATAAAATAATC+TGG + Chr8:3785433-3785452 MsG0880042108.01.T02:intron 10.0%
!! GATATTGTATATTAAAAAAA+TGG - Chr8:3783945-3783964 None:intergenic 10.0%
!! TTAAAAAAATGAAATAAATG+TGG - Chr8:3784347-3784366 None:intergenic 10.0%
!! TTAAATGGAATTAAAAAAAT+TGG - Chr8:3787387-3787406 None:intergenic 10.0%
!!! ATATTTTCTTCAAAAAAAAA+AGG - Chr8:3786410-3786429 None:intergenic 10.0%
!!! ATTAATTGTTTCTTATAATA+AGG - Chr8:3785162-3785181 None:intergenic 10.0%
!!! TAAGAAACAATTAATTTTTT+TGG + Chr8:3785167-3785186 MsG0880042108.01.T02:intron 10.0%
!!! TATTTTAAATCATTTATGTT+TGG + Chr8:3781901-3781920 MsG0880042108.01.T01:three_prime_UTR 10.0%
!!! TTATTAAAATTTTATTGAGT+TGG + Chr8:3782645-3782664 MsG0880042108.01.T01:intron 10.0%
!!! TTGTTTTAGTTTTTTATTTT+CGG + Chr8:3785723-3785742 MsG0880042108.01.T02:intron 10.0%
!!! TTTTAATATACAATATCAAT+AGG + Chr8:3783948-3783967 MsG0880042108.01.T02:intron 10.0%
!! AAATAGATTTCATCATTTAT+AGG - Chr8:3786052-3786071 None:intergenic 15.0%
!! AATAAAAAAATACTTCATCT+TGG - Chr8:3785675-3785694 None:intergenic 15.0%
!! AATAGATTTCATCATTTATA+GGG - Chr8:3786051-3786070 None:intergenic 15.0%
!! AGTAAAATTTACAATTTAGT+AGG - Chr8:3780509-3780528 None:intergenic 15.0%
!! ATATGAAGGTTATAAATAAT+GGG + Chr8:3780871-3780890 MsG0880042108.01.T01:intron 15.0%
!! CGTAACAAAATTAATAAATA+AGG - Chr8:3786267-3786286 None:intergenic 15.0%
!! TAAAAAACATGAAATAACTT+TGG - Chr8:3784194-3784213 None:intergenic 15.0%
!! TATATGAAGGTTATAAATAA+TGG + Chr8:3780870-3780889 MsG0880042108.01.T01:intron 15.0%
!! TCTAATAATAGCAAAAATAA+TGG - Chr8:3784680-3784699 None:intergenic 15.0%
!! TTGTTCAATCTAAAAAATTT+GGG + Chr8:3788184-3788203 MsG0880042108.01.T02:intron 15.0%
!!! AAAAAAGAGTATAAAATAGA+AGG - Chr8:3786462-3786481 None:intergenic 15.0%
!!! AAGTTATTTCATGTTTTTTA+AGG + Chr8:3784194-3784213 MsG0880042108.01.T02:intron 15.0%
!!! AAGTTTAGTTTAAATACTAA+AGG - Chr8:3785768-3785787 None:intergenic 15.0%
!!! AATAAAAAGTAATTTTGCTA+GGG - Chr8:3781280-3781299 None:intergenic 15.0%
!!! CAGATTTTTTTTTTTAAAGA+TGG - Chr8:3787759-3787778 None:intergenic 15.0%
!!! CATCTTTAAAAAAAAAAATC+TGG + Chr8:3787757-3787776 MsG0880042108.01.T02:intron 15.0%
!!! CTTTATTTTATCTTTTGTTA+CGG - Chr8:3780606-3780625 None:intergenic 15.0%
!!! GAATTTTACACTTTTTTTTT+TGG + Chr8:3786487-3786506 MsG0880042108.01.T02:intron 15.0%
!!! GATTTTTTTCATGAATTTTT+TGG - Chr8:3787636-3787655 None:intergenic 15.0%
!!! GTTTTTTTTTTTTCAATTAC+TGG - Chr8:3787942-3787961 None:intergenic 15.0%
!!! TAATTTTGTTGAATGAAAAA+CGG - Chr8:3785806-3785825 None:intergenic 15.0%
!!! TTTTTAATTAAAAGCATGTT+TGG - Chr8:3782069-3782088 None:intergenic 15.0%
!!! TTTTTTAGATGAAATTTGTT+AGG - Chr8:3786353-3786372 None:intergenic 15.0%
!! AAACCTTGGAATATTATTAT+AGG - Chr8:3785954-3785973 None:intergenic 20.0%
!! AACTAATCACTTAAAAATAG+AGG - Chr8:3780848-3780867 None:intergenic 20.0%
!! AAGGTAAAAATTTCGAATTA+GGG - Chr8:3780382-3780401 None:intergenic 20.0%
!! AATCATGAGAAATAGAAAAT+GGG - Chr8:3781661-3781680 None:intergenic 20.0%
!! ACTTAAATGAAAATTGTGTT+GGG + Chr8:3781690-3781709 MsG0880042108.01.T01:three_prime_UTR 20.0%
!! AGTATCAAAATAAAAGATCT+TGG - Chr8:3781340-3781359 None:intergenic 20.0%
!! ATAACATGATAATTGAAAGA+AGG + Chr8:3787156-3787175 MsG0880042108.01.T02:intron 20.0%
!! ATAATAGAACATATTCACTT+AGG - Chr8:3780480-3780499 None:intergenic 20.0%
!! ATATTATGAAAGAAATGACA+TGG - Chr8:3781718-3781737 None:intergenic 20.0%
!! ATCATTGAAAATATGTCAAT+TGG - Chr8:3781448-3781467 None:intergenic 20.0%
!! ATCTATAATATCTTTGATGA+AGG - Chr8:3787526-3787545 None:intergenic 20.0%
!! CATTAAAGATATTTCATTGT+AGG - Chr8:3784586-3784605 None:intergenic 20.0%
!! CTTGTTCAATCTAAAAAATT+TGG + Chr8:3788183-3788202 MsG0880042108.01.T02:intron 20.0%
!! GGTATATCAATATTGAAATA+TGG + Chr8:3784085-3784104 MsG0880042108.01.T02:intron 20.0%
!! TAAAATAACAATGTAACAGA+AGG - Chr8:3782939-3782958 None:intergenic 20.0%
!! TAACATGATAATTGAAAGAA+GGG + Chr8:3787157-3787176 MsG0880042108.01.T02:intron 20.0%
!! TAACCTGATAATAATTGATA+GGG + Chr8:3783101-3783120 MsG0880042108.01.T01:intron 20.0%
!! TAATAGAACATATTCACTTA+GGG - Chr8:3780479-3780498 None:intergenic 20.0%
!! TAATAGCAAAAATAATGGTA+AGG - Chr8:3784675-3784694 None:intergenic 20.0%
!! TAATTTAGGTATTATTACAG+CGG - Chr8:3781398-3781417 None:intergenic 20.0%
!! TACTTAAATGAAAATTGTGT+TGG + Chr8:3781689-3781708 MsG0880042108.01.T01:three_prime_UTR 20.0%
!! TACTTGAGCATAATAATTTA+AGG - Chr8:3787117-3787136 None:intergenic 20.0%
!! TAGTTAAAGTTAAATACAGT+GGG - Chr8:3785090-3785109 None:intergenic 20.0%
!! TATTAAATAACCCATTTGTT+GGG + Chr8:3785295-3785314 MsG0880042108.01.T02:intron 20.0%
!! TCATTGAAAATATGTCAATT+GGG - Chr8:3781447-3781466 None:intergenic 20.0%
!! TGATGTTTATTGAATGAATT+TGG - Chr8:3787576-3787595 None:intergenic 20.0%
!! TGTTCAATCTAAAAAATTTG+GGG + Chr8:3788185-3788204 MsG0880042108.01.T02:intron 20.0%
!! TTAGTTAAAGTTAAATACAG+TGG - Chr8:3785091-3785110 None:intergenic 20.0%
!! TTATTATCAGGATAAAGAAA+AGG + Chr8:3782288-3782307 MsG0880042108.01.T01:intron 20.0%
!! TTGTTATAACCTTATTAATG+AGG + Chr8:3784912-3784931 MsG0880042108.01.T02:intron 20.0%
!! TTTACAAAAATTCCCAAAAT+TGG + Chr8:3782796-3782815 MsG0880042108.01.T01:intron 20.0%
!! TTTATATTTCTTCTCCTTAA+TGG + Chr8:3782867-3782886 MsG0880042108.01.T01:intron 20.0%
!!! AAGGACATGTTATTTAATTT+AGG - Chr8:3781412-3781431 None:intergenic 20.0%
!!! AATGAAAAAACTTCATTTTC+TGG + Chr8:3783029-3783048 MsG0880042108.01.T01:intron 20.0%
!!! AGCAAAATTACTTTTTATTC+CGG + Chr8:3781281-3781300 MsG0880042108.01.T01:intron 20.0%
!!! AGTTTTCACATTTTATTATC+AGG + Chr8:3782276-3782295 MsG0880042108.01.T01:intron 20.0%
!!! ATAAAAAGTAATTTTGCTAG+GGG - Chr8:3781279-3781298 None:intergenic 20.0%
!!! ATGAAAAAACTTCATTTTCT+GGG + Chr8:3783030-3783049 MsG0880042108.01.T01:intron 20.0%
!!! ATTGTTGATTATGAGAAATT+TGG + Chr8:3788303-3788322 MsG0880042108.01.T02:CDS 20.0%
!!! GAAGATTATTTGTTAAAGAA+TGG - Chr8:3787670-3787689 None:intergenic 20.0%
!!! GAATAAAAAGTAATTTTGCT+AGG - Chr8:3781281-3781300 None:intergenic 20.0%
!!! TAAAATTTTATTGAGTTGGT+AGG + Chr8:3782649-3782668 MsG0880042108.01.T01:intron 20.0%
!!! TAAGAAAAAGTTGACTTTTT+AGG - Chr8:3785256-3785275 None:intergenic 20.0%
!!! TTGTTGAGTTGAAAAAATTA+TGG - Chr8:3787890-3787909 None:intergenic 20.0%
!!! TTTCTTTTACATGTCATTAT+TGG - Chr8:3787078-3787097 None:intergenic 20.0%
!!! TTTTGTTAGTAAAAACTGAA+TGG + Chr8:3784880-3784899 MsG0880042108.01.T02:intron 20.0%
!!! TTTTTCGAATTTCTCTTTTT+GGG - Chr8:3788037-3788056 None:intergenic 20.0%
! AAAATTCCCAAAATTGGATT+TGG + Chr8:3782802-3782821 MsG0880042108.01.T01:intron 25.0%
! AAACTAAACTTACCTCTATA+CGG + Chr8:3783075-3783094 MsG0880042108.01.T01:intron 25.0%
! AAATACCCTGAAAAAATAGA+AGG - Chr8:3781541-3781560 None:intergenic 25.0%
! AATATATTCCAGATTCATCA+TGG + Chr8:3782976-3782995 MsG0880042108.01.T01:intron 25.0%
! AATTGTAGTACTGTTAAACA+TGG + Chr8:3783172-3783191 MsG0880042108.01.T01:intron 25.0%
! ACTCCTATAATAATATTCCA+AGG + Chr8:3785948-3785967 MsG0880042108.01.T02:intron 25.0%
! AGAAAAAGTTTACAGAAAGA+AGG - Chr8:3782452-3782471 None:intergenic 25.0%
! AGTATATCACTTCAGAATAT+AGG - Chr8:3780816-3780835 None:intergenic 25.0%
! ATAACACATGAACTTTGATA+CGG - Chr8:3781223-3781242 None:intergenic 25.0%
! ATACTAACATGAGAATTGTA+TGG + Chr8:3784621-3784640 MsG0880042108.01.T02:intron 25.0%
! ATAGAAAGAGATATTACGTA+GGG - Chr8:3782118-3782137 None:intergenic 25.0%
! ATCACACATTTGTATGAAAT+AGG - Chr8:3783813-3783832 None:intergenic 25.0%
! ATCATACATGATCATTGATA+TGG - Chr8:3786439-3786458 None:intergenic 25.0%
! ATTTGGATGAAGATTTAAGT+TGG - Chr8:3787559-3787578 None:intergenic 25.0%
! CATTCATTAAATGATGTATG+TGG - Chr8:3786159-3786178 None:intergenic 25.0%
! CTCAAGTAGATATTTCATTA+GGG + Chr8:3787129-3787148 MsG0880042108.01.T02:intron 25.0%
! CTTAAATGAAAATTGTGTTG+GGG + Chr8:3781691-3781710 MsG0880042108.01.T01:three_prime_UTR 25.0%
! GAAGGTAAAAATTTCGAATT+AGG - Chr8:3780383-3780402 None:intergenic 25.0%
! GAATCATGAGAAATAGAAAA+TGG - Chr8:3781662-3781681 None:intergenic 25.0%
! GTAACCTGATAATAATTGAT+AGG + Chr8:3783100-3783119 MsG0880042108.01.T01:intron 25.0%
! GTATTAAATAACCCATTTGT+TGG + Chr8:3785294-3785313 MsG0880042108.01.T02:intron 25.0%
! TAATAAAATAGCTACCTGAT+AGG - Chr8:3780932-3780951 None:intergenic 25.0%
! TAATTGAAAGAAGGGTTAAT+AGG + Chr8:3787165-3787184 MsG0880042108.01.T02:intron 25.0%
! TAGGACAAACATAAAGAATA+AGG - Chr8:3780775-3780794 None:intergenic 25.0%
! TATAACCTTATTAATGAGGT+GGG + Chr8:3784916-3784935 MsG0880042108.01.T02:intron 25.0%
! TCAAATATTAACACAAACCT+TGG - Chr8:3785968-3785987 None:intergenic 25.0%
! TTATAACCTTATTAATGAGG+TGG + Chr8:3784915-3784934 MsG0880042108.01.T02:intron 25.0%
! TTATTGTGCATTAATCAATG+AGG + Chr8:3787329-3787348 MsG0880042108.01.T02:intron 25.0%
! TTTCTTAAAAAAAAGGGAAG+CGG - Chr8:3786601-3786620 None:intergenic 25.0%
!! AAAACTTTTCTCAATTATGG+TGG + Chr8:3785829-3785848 MsG0880042108.01.T02:intron 25.0%
!! ACATCCTAATTTTTCGTTTA+GGG + Chr8:3780405-3780424 MsG0880042108.01.T01:intron 25.0%
!! ACATTGTTTGCAACTTTTTA+TGG + Chr8:3785354-3785373 MsG0880042108.01.T02:intron 25.0%
!! ACGGGTTAAAGATTATTTAT+TGG + Chr8:3786647-3786666 MsG0880042108.01.T02:intron 25.0%
!! AGGTAAGTTTAGTTTACAAT+TGG - Chr8:3783070-3783089 None:intergenic 25.0%
!! AGTGATTAGTTAGTATATGA+AGG + Chr8:3780857-3780876 MsG0880042108.01.T01:intron 25.0%
!! AGTTTTACAGTTTGAAAGAA+AGG - Chr8:3788158-3788177 None:intergenic 25.0%
!! ATCTGTCAAATAAAGGTTTT+TGG - Chr8:3785858-3785877 None:intergenic 25.0%
!! ATGCTTGTTAAAATGAAGAA+GGG + Chr8:3782555-3782574 MsG0880042108.01.T01:intron 25.0%
!! ATGTTAGTATGTAACACTTT+TGG - Chr8:3784611-3784630 None:intergenic 25.0%
!! ATTTTGCTTATAATAGTGAC+CGG + Chr8:3786194-3786213 MsG0880042108.01.T02:intron 25.0%
!! CTGGAGATTTGAAAATTTTA+GGG + Chr8:3788271-3788290 MsG0880042108.01.T02:CDS 25.0%
!! GACAAGATATATTTTGTCAT+TGG + Chr8:3784960-3784979 MsG0880042108.01.T02:intron 25.0%
!! GATTATGAGAAATTTGGAAT+TGG + Chr8:3788309-3788328 MsG0880042108.01.T02:CDS 25.0%
!! GGAATTTGATTTCAATTTCT+GGG - Chr8:3788002-3788021 None:intergenic 25.0%
!! GTTTTACAGTTTGAAAGAAA+GGG - Chr8:3788157-3788176 None:intergenic 25.0%
!! TAAGCAAAACTTTGCATTTT+AGG + Chr8:3786095-3786114 MsG0880042108.01.T02:intron 25.0%
!! TACAAGCTCATAATTTTTGA+AGG - Chr8:3785118-3785137 None:intergenic 25.0%
!! TAGACAATGATCTTATGTTT+TGG + Chr8:3780981-3781000 MsG0880042108.01.T01:intron 25.0%
!! TCGAAAACTTTTCTCAATTA+TGG + Chr8:3785826-3785845 MsG0880042108.01.T02:intron 25.0%
!! TCTGGAGATTTGAAAATTTT+AGG + Chr8:3788270-3788289 MsG0880042108.01.T02:CDS 25.0%
!! TGGAATTTGATTTCAATTTC+TGG - Chr8:3788003-3788022 None:intergenic 25.0%
!! TGGAGATTTGAAAATTTTAG+GGG + Chr8:3788272-3788291 MsG0880042108.01.T02:CDS 25.0%
!! TTGTTTCTTATAATAAGGAC+CGG - Chr8:3785157-3785176 None:intergenic 25.0%
!! TTTGGATGAAGATTTAAGTT+GGG - Chr8:3787558-3787577 None:intergenic 25.0%
!! TTTTACTGATGAGATAACAT+AGG + Chr8:3783249-3783268 MsG0880042108.01.T01:intron 25.0%
!! TTTTCGAATTTCTCTTTTTG+GGG - Chr8:3788036-3788055 None:intergenic 25.0%
!!! AAAAAAATGGCCAAGTTTTT+TGG - Chr8:3783932-3783951 None:intergenic 25.0%
!!! ATTATTTCTACCTTGATAGA+TGG - Chr8:3782421-3782440 None:intergenic 25.0%
!!! CTACAAGTTTTTTTTTAGCA+GGG - Chr8:3787229-3787248 None:intergenic 25.0%
!!! CTTATTTTTATAAGCTCTCT+AGG - Chr8:3780654-3780673 None:intergenic 25.0%
!!! CTTTTCCTTCTATTTTTTCA+GGG + Chr8:3781533-3781552 MsG0880042108.01.T01:intron 25.0%
!!! CTTTTTCGAATTTCTCTTTT+TGG - Chr8:3788038-3788057 None:intergenic 25.0%
!!! GATTGAACATGTTTTTAGTT+TGG + Chr8:3781015-3781034 MsG0880042108.01.T01:intron 25.0%
!!! GCAAAATTACTTTTTATTCC+GGG + Chr8:3781282-3781301 MsG0880042108.01.T01:intron 25.0%
!!! GTCAACTTTTTCTTACAATA+AGG + Chr8:3785261-3785280 MsG0880042108.01.T02:intron 25.0%
!!! TACAAGTTTTTTTTTAGCAG+GGG - Chr8:3787228-3787247 None:intergenic 25.0%
!!! TCATTTTAACAAGCATGAAA+GGG - Chr8:3782551-3782570 None:intergenic 25.0%
!!! TCTACAAGTTTTTTTTTAGC+AGG - Chr8:3787230-3787249 None:intergenic 25.0%
!!! TTAAAGAATGGTGTTATTGT+TGG - Chr8:3787658-3787677 None:intergenic 25.0%
!!! TTCATTTTAACAAGCATGAA+AGG - Chr8:3782552-3782571 None:intergenic 25.0%
!!! TTCTGTAAACTTTTTCTGTT+GGG + Chr8:3782455-3782474 MsG0880042108.01.T01:intron 25.0%
!!! TTGGTTCAATTTTTAAGACA+GGG + Chr8:3781920-3781939 MsG0880042108.01.T01:three_prime_UTR 25.0%
!!! TTTCTGTAAACTTTTTCTGT+TGG + Chr8:3782454-3782473 MsG0880042108.01.T01:intron 25.0%
!!! TTTGGTTCAATTTTTAAGAC+AGG + Chr8:3781919-3781938 MsG0880042108.01.T01:three_prime_UTR 25.0%
!!! TTTTATTTTGATACTACTGC+TGG + Chr8:3781345-3781364 MsG0880042108.01.T01:intron 25.0%
!!! TTTTTATTTTCGGTCCATTA+GGG + Chr8:3785733-3785752 MsG0880042108.01.T02:intron 25.0%
!!! TTTTTGGAGATGTATGATTA+AGG - Chr8:3784801-3784820 None:intergenic 25.0%
!!! TTTTTTATTTTCGGTCCATT+AGG + Chr8:3785732-3785751 MsG0880042108.01.T02:intron 25.0%
AAAAAAGTGAGATGCCATTA+AGG - Chr8:3782884-3782903 None:intergenic 30.0%
AAAACCAAGGAATCTTCTAA+TGG - Chr8:3787263-3787282 None:intergenic 30.0%
AAAGGAATAACAAACCCTAA+TGG - Chr8:3785750-3785769 None:intergenic 30.0%
AACCTAATAAAGCAAATGAG+CGG - Chr8:3786317-3786336 None:intergenic 30.0%
AATTTGGGGAATTTAGAGAT+TGG + Chr8:3788199-3788218 MsG0880042108.01.T02:intron 30.0%
ACAAATGAATGTCATATTCC+CGG - Chr8:3781303-3781322 None:intergenic 30.0%
ACAATGATCAATGATGTGAT+TGG - Chr8:3780117-3780136 None:intergenic 30.0%
ACTAGACAAGTCATTACTAT+TGG - Chr8:3784861-3784880 None:intergenic 30.0%
AGAACCAATCAGAATTTGAA+TGG - Chr8:3780957-3780976 None:intergenic 30.0%
ATAAGAGGAGGAATCTTAAA+TGG - Chr8:3782040-3782059 None:intergenic 30.0%
ATTTGGGGAATTTAGAGATT+GGG + Chr8:3788200-3788219 MsG0880042108.01.T02:intron 30.0%
CAATGATCAATGATGTGATT+GGG - Chr8:3780116-3780135 None:intergenic 30.0%
CAATGATGTTGATATAGAAG+CGG + Chr8:3781476-3781495 MsG0880042108.01.T01:intron 30.0%
CATTTGTATGAAATAGGAAC+CGG - Chr8:3783807-3783826 None:intergenic 30.0%
CTACCATATCAATGATCTTA+CGG + Chr8:3786628-3786647 MsG0880042108.01.T02:intron 30.0%
CTGTGAAGTTTCATTAATTC+TGG + Chr8:3781126-3781145 MsG0880042108.01.T01:CDS 30.0%
CTTCAAAAAAAAAAGGCAAG+CGG - Chr8:3786403-3786422 None:intergenic 30.0%
CTTTGATGAAGGTTTATGTT+GGG - Chr8:3787515-3787534 None:intergenic 30.0%
GAAAATATGTCAATTGGGTT+TGG - Chr8:3781442-3781461 None:intergenic 30.0%
GAAACCCTAAACGAAAAATT+AGG - Chr8:3780412-3780431 None:intergenic 30.0%
GAAATTCGAAAAAGAAGAAG+AGG + Chr8:3788044-3788063 MsG0880042108.01.T02:intron 30.0%
GATAGAAAGAGATATTACGT+AGG - Chr8:3782119-3782138 None:intergenic 30.0%
GCAAAGAAGTAAGAAAGTTT+GGG + Chr8:3785014-3785033 MsG0880042108.01.T02:intron 30.0%
GCTCAAGTAGATATTTCATT+AGG + Chr8:3787128-3787147 MsG0880042108.01.T02:intron 30.0%
GGATAGCTGATATATAAAAC+AGG - Chr8:3780633-3780652 None:intergenic 30.0%
GTCTAGGTAATATTCAACAT+AGG - Chr8:3780794-3780813 None:intergenic 30.0%
TAACCATGATTTACAAGAAC+TGG - Chr8:3783468-3783487 None:intergenic 30.0%
TAAGATCACAATCTGATACA+GGG - Chr8:3782170-3782189 None:intergenic 30.0%
TACACCATTCAAATTCTGAT+TGG + Chr8:3780950-3780969 MsG0880042108.01.T01:intron 30.0%
TACCATATCAATGATCTTAC+GGG + Chr8:3786629-3786648 MsG0880042108.01.T02:intron 30.0%
TACGTGATTGTAGATAGAAA+AGG + Chr8:3784124-3784143 MsG0880042108.01.T02:intron 30.0%
TAGAAAGAGATATTACGTAG+GGG - Chr8:3782117-3782136 None:intergenic 30.0%
TATATCTTGTCAAGTCTTCA+TGG - Chr8:3784951-3784970 None:intergenic 30.0%
TATATTCTGGTGAGAGAAAA+TGG - Chr8:3782962-3782981 None:intergenic 30.0%
TATCAGATTGTGATCTTAAC+TGG + Chr8:3782172-3782191 MsG0880042108.01.T01:three_prime_UTR 30.0%
TATTCCATGACCAAAAAACT+TGG + Chr8:3783919-3783938 MsG0880042108.01.T02:intron 30.0%
TCACCCTATCAATTATTATC+AGG - Chr8:3783107-3783126 None:intergenic 30.0%
TCATTTAAATATACACCCTC+CGG - Chr8:3786216-3786235 None:intergenic 30.0%
TCTATGTGATGTACGTAAAA+TGG + Chr8:3785641-3785660 MsG0880042108.01.T02:intron 30.0%
TCTTTGATGAAGGTTTATGT+TGG - Chr8:3787516-3787535 None:intergenic 30.0%
TTAAGATCACAATCTGATAC+AGG - Chr8:3782171-3782190 None:intergenic 30.0%
TTCAGTCGTTAGTTATGTTA+TGG + Chr8:3784036-3784055 MsG0880042108.01.T02:intron 30.0%
TTTGATGAATCTGAGAAATC+TGG + Chr8:3788252-3788271 MsG0880042108.01.T02:CDS 30.0%
! AAAAGCAGGACGATTTTATT+GGG + Chr8:3782838-3782857 MsG0880042108.01.T01:intron 30.0%
! AAAGTACTTATGCTATAAGC+TGG - Chr8:3780553-3780572 None:intergenic 30.0%
! AAGTGCATATGATTTTCTGA+GGG - Chr8:3786872-3786891 None:intergenic 30.0%
! AATCTATTTTGTACACCATC+CGG + Chr8:3786063-3786082 MsG0880042108.01.T02:intron 30.0%
! AATTTCTGGGTTGAGTTTAT+GGG - Chr8:3787989-3788008 None:intergenic 30.0%
! AGTTCTCCAAATCCAATTTT+GGG - Chr8:3782811-3782830 None:intergenic 30.0%
! ATTTGGAATTGGATTGAAGA+AGG + Chr8:3788320-3788339 MsG0880042108.01.T02:CDS 30.0%
! ATTTTGAACCATGATGAATC+TGG - Chr8:3782987-3783006 None:intergenic 30.0%
! CACATCCTAATTTTTCGTTT+AGG + Chr8:3780404-3780423 MsG0880042108.01.T01:intron 30.0%
! CATGCTTGTTAAAATGAAGA+AGG + Chr8:3782554-3782573 MsG0880042108.01.T01:intron 30.0%
! CATGTTTGGTTTAAGATAAG+AGG - Chr8:3782055-3782074 None:intergenic 30.0%
! CTTTTTCTTACAATAAGGAC+CGG + Chr8:3785266-3785285 MsG0880042108.01.T02:intron 30.0%
! GATGAATCTGGAATATATTC+TGG - Chr8:3782975-3782994 None:intergenic 30.0%
! GTTTTGCTTATAATAGTGAC+CGG - Chr8:3786085-3786104 None:intergenic 30.0%
! TAAAAGCAGGACGATTTTAT+TGG + Chr8:3782837-3782856 MsG0880042108.01.T01:intron 30.0%
! TAATCTGGCTTAATGAAAAG+AGG + Chr8:3785448-3785467 MsG0880042108.01.T02:intron 30.0%
! TGCTTGTTAAAATGAAGAAG+GGG + Chr8:3782556-3782575 MsG0880042108.01.T01:intron 30.0%
! TGTATCCATGGTTCAATTTT+TGG - Chr8:3784817-3784836 None:intergenic 30.0%
! TTGTTTGTGTTGTTGATAGA+GGG - Chr8:3787735-3787754 None:intergenic 30.0%
! TTTGTTTGTGTTGTTGATAG+AGG - Chr8:3787736-3787755 None:intergenic 30.0%
!! AGCAGGGAATAACTTATTTT+TGG + Chr8:3782710-3782729 MsG0880042108.01.T01:intron 30.0%
!! ATAGAAAAGGCTCTAAAAGA+AGG + Chr8:3784137-3784156 MsG0880042108.01.T02:intron 30.0%
!! GATGAGAAGGATTTGTTTTT+GGG + Chr8:3782482-3782501 MsG0880042108.01.T01:intron 30.0%
!! TTTCTTTGAGATCAGCTATA+AGG + Chr8:3780428-3780447 MsG0880042108.01.T01:intron 30.0%
!!! CTTTTTGGGGTATGAATTTT+TGG - Chr8:3788023-3788042 None:intergenic 30.0%
!!! GCTTTTCCTTCTATTTTTTC+AGG + Chr8:3781532-3781551 MsG0880042108.01.T01:intron 30.0%
!!! TGGTTCAATTTTTAAGACAG+GGG + Chr8:3781921-3781940 MsG0880042108.01.T01:three_prime_UTR 30.0%
!!! TGTGTGCAATGCATTTTTTT+AGG - Chr8:3786564-3786583 None:intergenic 30.0%
!!! TTTTTTGGATTATGCCATGA+AGG - Chr8:3787621-3787640 None:intergenic 30.0%
AAAAAAAAAGGCAAGCGGAT+AGG - Chr8:3786398-3786417 None:intergenic 35.0%
AAAAAACCACCAAATGACAG+GGG - Chr8:3787199-3787218 None:intergenic 35.0%
AACATAAAGAATAAGGCCCT+AGG - Chr8:3780768-3780787 None:intergenic 35.0%
AACCCGTAAGATCATTGATA+TGG - Chr8:3786634-3786653 None:intergenic 35.0%
AAGCAAAAAGTAGTCTAGGA+GGG - Chr8:3781966-3781985 None:intergenic 35.0%
AAGCAGTACACTCTTGATAA+TGG - Chr8:3783980-3783999 None:intergenic 35.0%
AAGGAATCTTCTAATGGCAA+GGG - Chr8:3787257-3787276 None:intergenic 35.0%
AATTCTCGCTAGATATCAGT+TGG + Chr8:3782201-3782220 MsG0880042108.01.T01:three_prime_UTR 35.0%
ACCTAATAAAGCAAATGAGC+GGG - Chr8:3786316-3786335 None:intergenic 35.0%
AGAACATATTCACTTAGGGT+CGG - Chr8:3780475-3780494 None:intergenic 35.0%
AGCGAACTAAACACTCATAT+GGG + Chr8:3785390-3785409 MsG0880042108.01.T02:intron 35.0%
AGGTTATGTTTGTGAGATTG+AGG - Chr8:3788120-3788139 None:intergenic 35.0%
AGTTATTGCAGAACTCATGT+TGG + Chr8:3783553-3783572 MsG0880042108.01.T01:three_prime_UTR 35.0%
ATATCAGTTGGCTGAATTTG+AGG + Chr8:3782213-3782232 MsG0880042108.01.T01:three_prime_UTR 35.0%
ATATTTGCAGTCCCAACAAA+TGG - Chr8:3785309-3785328 None:intergenic 35.0%
ATGGATGACTTTGTACTGTA+GGG + Chr8:3786905-3786924 MsG0880042108.01.T02:intron 35.0%
ATTCTCCTATCTGCAACAAA+AGG + Chr8:3783742-3783761 MsG0880042108.01.T02:intron 35.0%
ATTCTCCTATCTGCATCAAA+TGG + Chr8:3783702-3783721 MsG0880042108.01.T01:three_prime_UTR 35.0%
CAAAAAACCACCAAATGACA+GGG - Chr8:3787200-3787219 None:intergenic 35.0%
CACTTTGCTTTCAAAAACTC+TGG - Chr8:3781097-3781116 None:intergenic 35.0%
CATCTCCAAAAATTGAACCA+TGG + Chr8:3784809-3784828 MsG0880042108.01.T02:intron 35.0%
CCATGAAGGTTTGAATGTTT+AGG - Chr8:3787607-3787626 None:intergenic 35.0%
CCTAAACATTCAAACCTTCA+TGG + Chr8:3787604-3787623 MsG0880042108.01.T02:intron 35.0%
CCTCGATAAAAATCACAGTA+AGG - Chr8:3783590-3783609 None:intergenic 35.0%
CGAAAAATTAGGATGTGTGA+AGG - Chr8:3780401-3780420 None:intergenic 35.0%
CGTTAGTTATGTTATGGCAT+AGG + Chr8:3784042-3784061 MsG0880042108.01.T02:intron 35.0%
CTAACATGAGAATTGTATGG+TGG + Chr8:3784624-3784643 MsG0880042108.01.T02:intron 35.0%
CTCAGAAAATCATATGCACT+TGG + Chr8:3786871-3786890 MsG0880042108.01.T02:intron 35.0%
CTTCCAGTTCTTGTAAATCA+TGG + Chr8:3783462-3783481 MsG0880042108.01.T01:three_prime_UTR 35.0%
GAAAAAATTATGGCGAGAGA+GGG - Chr8:3787880-3787899 None:intergenic 35.0%
GACTATTCCCTTCACAAATT+CGG + Chr8:3782242-3782261 MsG0880042108.01.T01:intron 35.0%
GAGAACTCATAAGTAAAAGC+AGG + Chr8:3782824-3782843 MsG0880042108.01.T01:intron 35.0%
GATTTGATAGAGATGGTTTG+TGG + Chr8:3783612-3783631 MsG0880042108.01.T01:three_prime_UTR 35.0%
GCGACAAATCTGTCAAATAA+AGG - Chr8:3785865-3785884 None:intergenic 35.0%
GCTATAAGCTGGATATTAAG+CGG - Chr8:3780542-3780561 None:intergenic 35.0%
GGCAAAGAAGTAAGAAAGTT+TGG + Chr8:3785013-3785032 MsG0880042108.01.T02:intron 35.0%
GGGTTATTTAATACTCCTTC+CGG - Chr8:3785288-3785307 None:intergenic 35.0%
TAAAAAAAAGGGAAGCGGAT+AGG - Chr8:3786596-3786615 None:intergenic 35.0%
TATGGATGACTTTGTACTGT+AGG + Chr8:3786904-3786923 MsG0880042108.01.T02:intron 35.0%
TATTTGCAGTCCCAACAAAT+GGG - Chr8:3785308-3785327 None:intergenic 35.0%
TCACTGAGAAACTTGATTCA+TGG - Chr8:3781191-3781210 None:intergenic 35.0%
TCACTTCAGAATATAGGTCT+AGG - Chr8:3780810-3780829 None:intergenic 35.0%
TCCTAAACCGAATTTGTGAA+GGG - Chr8:3782252-3782271 None:intergenic 35.0%
TGAAAAAATTATGGCGAGAG+AGG - Chr8:3787881-3787900 None:intergenic 35.0%
TGATTTCCTATCTCACATGT+TGG + Chr8:3783200-3783219 MsG0880042108.01.T01:intron 35.0%
TGGATATTAAGCGGTTTAAG+TGG - Chr8:3780533-3780552 None:intergenic 35.0%
TGTTAAAATGAAGAAGGGGA+GGG + Chr8:3782560-3782579 MsG0880042108.01.T01:intron 35.0%
TTACTGAATTCAGCAGAAGA+AGG + Chr8:3780180-3780199 MsG0880042108.01.T01:intron 35.0%
TTCAGCAACTCTCAACTAAA+CGG - Chr8:3781871-3781890 None:intergenic 35.0%
TTCCTAAACCGAATTTGTGA+AGG - Chr8:3782253-3782272 None:intergenic 35.0%
TTCTCCTATCTGCAACAAAA+GGG + Chr8:3783743-3783762 MsG0880042108.01.T02:intron 35.0%
TTCTCCTATCTGCATCAAAT+GGG + Chr8:3783703-3783722 MsG0880042108.01.T01:three_prime_UTR 35.0%
TTCTTATAATAAGGACCGGA+GGG - Chr8:3785153-3785172 None:intergenic 35.0%
TTGGGAAGAAGAAGAACAAA+AGG - Chr8:3780098-3780117 None:intergenic 35.0%
TTGGGAAGACAAGATATTTG+AGG + Chr8:3788218-3788237 MsG0880042108.01.T02:CDS 35.0%
TTGTGCATTAATCAATGAGG+TGG + Chr8:3787332-3787351 MsG0880042108.01.T02:intron 35.0%
TTGTTAAAATGAAGAAGGGG+AGG + Chr8:3782559-3782578 MsG0880042108.01.T01:intron 35.0%
TTTAGTTGAGAGTTGCTGAA+GGG + Chr8:3781871-3781890 MsG0880042108.01.T01:three_prime_UTR 35.0%
TTTCTTATAATAAGGACCGG+AGG - Chr8:3785154-3785173 None:intergenic 35.0%
TTTGACTCCTCTTCTCATTA+TGG - Chr8:3785584-3785603 None:intergenic 35.0%
! AAAAGGTGTAACGTACTAAC+CGG - Chr8:3780081-3780100 None:intergenic 35.0%
! AGGAAAAGCACATTACTCTA+AGG - Chr8:3781521-3781540 None:intergenic 35.0%
! CAAGTGCATATGATTTTCTG+AGG - Chr8:3786873-3786892 None:intergenic 35.0%
! CAATTTCTGGGTTGAGTTTA+TGG - Chr8:3787990-3788009 None:intergenic 35.0%
! CCTTACTGTGATTTTTATCG+AGG + Chr8:3783587-3783606 MsG0880042108.01.T01:three_prime_UTR 35.0%
! CTATTGGTAATAGAGTAGAC+CGG - Chr8:3784845-3784864 None:intergenic 35.0%
! GAAGAAAGGAACACTTGTTT+TGG - Chr8:3780011-3780030 None:intergenic 35.0%
! GAGTTCTCCAAATCCAATTT+TGG - Chr8:3782812-3782831 None:intergenic 35.0%
! GTTTGGTTTAAGATAAGAGG+AGG - Chr8:3782052-3782071 None:intergenic 35.0%
! TACTGTGATTTTTATCGAGG+AGG + Chr8:3783590-3783609 MsG0880042108.01.T01:three_prime_UTR 35.0%
! TTATGGCATAGGACACTTTT+CGG + Chr8:3784053-3784072 MsG0880042108.01.T02:intron 35.0%
! TTCCGCTCATTTGCTTTATT+AGG + Chr8:3786523-3786542 MsG0880042108.01.T02:intron 35.0%
! TTGAAGGGGAAAACTTTTGA+AGG + Chr8:3784248-3784267 MsG0880042108.01.T02:intron 35.0%
! TTTAAAACCACGATCCACAA+GGG - Chr8:3783153-3783172 None:intergenic 35.0%
! TTTTTGCTTCCCCTCAAATT+GGG + Chr8:3781977-3781996 MsG0880042108.01.T01:three_prime_UTR 35.0%
!! AAATGAGCTTTTGTTGTCAC+TGG - Chr8:3787797-3787816 None:intergenic 35.0%
!! AATGAGCTTTTGTTGTCACT+GGG - Chr8:3787796-3787815 None:intergenic 35.0%
!! CTGTGTTGTGATTTGGATTT+TGG + Chr8:3784219-3784238 MsG0880042108.01.T02:intron 35.0%
!! GAATCCTGTGTTTGCTTTTA+GGG + Chr8:3781844-3781863 MsG0880042108.01.T01:three_prime_UTR 35.0%
!! GGATGAGAAGGATTTGTTTT+TGG + Chr8:3782481-3782500 MsG0880042108.01.T01:intron 35.0%
!! GTAGTGTTGTTTGATTGATG+AGG + Chr8:3782675-3782694 MsG0880042108.01.T01:intron 35.0%
!! GTTGTGATTTGGATTTTGGA+GGG + Chr8:3784223-3784242 MsG0880042108.01.T02:intron 35.0%
!! TGAATCCTGTGTTTGCTTTT+AGG + Chr8:3781843-3781862 MsG0880042108.01.T01:three_prime_UTR 35.0%
!! TGTAAACTTTTTCTGTTGGG+CGG + Chr8:3782458-3782477 MsG0880042108.01.T01:intron 35.0%
!! TGTTGTGATTTGGATTTTGG+AGG + Chr8:3784222-3784241 MsG0880042108.01.T02:intron 35.0%
!!! AATTTTTAAGACAGGGGGAT+GGG + Chr8:3781927-3781946 MsG0880042108.01.T01:three_prime_UTR 35.0%
!!! AGAAGGATTTGTTTTTGGGA+AGG + Chr8:3782486-3782505 MsG0880042108.01.T01:intron 35.0%
!!! GATCTTATGTTTTGGCATGT+TGG + Chr8:3780989-3781008 MsG0880042108.01.T01:intron 35.0%
!!! GGTTCAATTTTTAAGACAGG+GGG + Chr8:3781922-3781941 MsG0880042108.01.T01:three_prime_UTR 35.0%
!!! GTTTTTTGGTCATGGAATAG+AGG - Chr8:3783918-3783937 None:intergenic 35.0%
!!! TTTTAAAACCACGATCCACA+AGG - Chr8:3783154-3783173 None:intergenic 35.0%
!!! TTTTTTGACATGCAGACAAG+AGG + Chr8:3783363-3783382 MsG0880042108.01.T01:intron 35.0%
AAAAACCACCAAATGACAGG+GGG - Chr8:3787198-3787217 None:intergenic 40.0%
AAAACGGTGAGAGAAGTTGA+GGG - Chr8:3780054-3780073 None:intergenic 40.0%
AAAGAATAAGGCCCTAGGAT+TGG - Chr8:3780763-3780782 None:intergenic 40.0%
AAGAAGGAGTGAATCATGTC+TGG + Chr8:3780196-3780215 MsG0880042108.01.T01:exon 40.0%
AATTGGGTTTGGCAAGTTCA+AGG - Chr8:3781431-3781450 None:intergenic 40.0%
ACAATGTAACAGAAGGCTCA+CGG - Chr8:3782932-3782951 None:intergenic 40.0%
ACATGAGAATTGTATGGTGG+AGG + Chr8:3784627-3784646 MsG0880042108.01.T02:intron 40.0%
AGCAAAAAGTAGTCTAGGAG+GGG - Chr8:3781965-3781984 None:intergenic 40.0%
AGCTCAAATAAGCCAATCCT+AGG + Chr8:3780748-3780767 MsG0880042108.01.T01:intron 40.0%
AGGAATCTTCTAATGGCAAG+GGG - Chr8:3787256-3787275 None:intergenic 40.0%
AGGTTTATGTTGGGAAGAAG+AGG - Chr8:3787506-3787525 None:intergenic 40.0%
ATAGCTTCCTCTACAGTTTC+CGG - Chr8:3782388-3782407 None:intergenic 40.0%
ATATTCACTTAGGGTCGGTT+AGG - Chr8:3780470-3780489 None:intergenic 40.0%
ATCAGGTTACAACCGTATAG+AGG - Chr8:3783090-3783109 None:intergenic 40.0%
ATTATAGGAGTGACGCAGAA+CGG - Chr8:3785939-3785958 None:intergenic 40.0%
CAAATGAGCGGGGAAAAATT+AGG - Chr8:3786305-3786324 None:intergenic 40.0%
CAAGCGGATAGGAATGAAAT+TGG - Chr8:3786387-3786406 None:intergenic 40.0%
CAAGGAATCTTCTAATGGCA+AGG - Chr8:3787258-3787277 None:intergenic 40.0%
CAGCGAACTAAACACTCATA+TGG + Chr8:3785389-3785408 MsG0880042108.01.T02:intron 40.0%
CCAAAAAACCACCAAATGAC+AGG - Chr8:3787201-3787220 None:intergenic 40.0%
CCAATCTCCATAATGAGAAG+AGG + Chr8:3785574-3785593 MsG0880042108.01.T02:intron 40.0%
CCTAATAAAGCAAATGAGCG+GGG - Chr8:3786315-3786334 None:intergenic 40.0%
CCTCTTCTCATTATGGAGAT+TGG - Chr8:3785577-3785596 None:intergenic 40.0%
CGTACTAACCGGAATCAAAA+CGG - Chr8:3780070-3780089 None:intergenic 40.0%
CTTGCCATTAGAAGATTCCT+TGG + Chr8:3787256-3787275 MsG0880042108.01.T02:intron 40.0%
GAACCATGGATACATTTGTC+CGG + Chr8:3784823-3784842 MsG0880042108.01.T02:intron 40.0%
GAAGCAAAAAGTAGTCTAGG+AGG - Chr8:3781967-3781986 None:intergenic 40.0%
GCGAACTAAACACTCATATG+GGG + Chr8:3785391-3785410 MsG0880042108.01.T02:intron 40.0%
GCTCAAATAAGCCAATCCTA+GGG + Chr8:3780749-3780768 MsG0880042108.01.T01:intron 40.0%
GGTTTATGTTGGGAAGAAGA+GGG - Chr8:3787505-3787524 None:intergenic 40.0%
GTACAACTTTATACTCCCTC+CGG + Chr8:3785135-3785154 MsG0880042108.01.T02:intron 40.0%
GTTCTCCCACCTCATTAATA+AGG - Chr8:3784924-3784943 None:intergenic 40.0%
GTTCTGTGATGTACTGTAAG+TGG + Chr8:3783488-3783507 MsG0880042108.01.T01:three_prime_UTR 40.0%
GTTTAGTTGAGAGTTGCTGA+AGG + Chr8:3781870-3781889 MsG0880042108.01.T01:three_prime_UTR 40.0%
TAAGGCTCTGTGTTGTGATT+TGG + Chr8:3784212-3784231 MsG0880042108.01.T02:intron 40.0%
TCCCTTCACAAATTCGGTTT+AGG + Chr8:3782248-3782267 MsG0880042108.01.T01:intron 40.0%
TCTCCTATCTGCAACAAAAG+GGG + Chr8:3783744-3783763 MsG0880042108.01.T02:intron 40.0%
TCTCCTATCTGCATCAAATG+GGG + Chr8:3783704-3783723 MsG0880042108.01.T01:three_prime_UTR 40.0%
TCTTTCCCTCTTTGCGAATT+GGG - Chr8:3784431-3784450 None:intergenic 40.0%
TGCTATGGTTCCATCTATCA+AGG + Chr8:3782408-3782427 MsG0880042108.01.T01:three_prime_UTR 40.0%
TGCTTATAATAGTGACCGGA+GGG + Chr8:3786198-3786217 MsG0880042108.01.T02:intron 40.0%
TGCTTATAATAGTGACCGGA+TGG - Chr8:3786217-3786198 None:intergenic 40.0%
TGTAGAGGAAGCTATTGCTA+TGG + Chr8:3782393-3782412 MsG0880042108.01.T01:three_prime_UTR 40.0%
TTAATGAAAAGAGGAGGCAG+AGG + Chr8:3785457-3785476 MsG0880042108.01.T02:intron 40.0%
TTAGTTGAGAGTTGCTGAAG+GGG + Chr8:3781872-3781891 MsG0880042108.01.T01:three_prime_UTR 40.0%
TTCTTACAATAAGGACCGGA+AGG + Chr8:3785270-3785289 MsG0880042108.01.T02:intron 40.0%
TTCTTTCCCTCTTTGCGAAT+TGG - Chr8:3784432-3784451 None:intergenic 40.0%
TTGAAAGAAAGGGCTCATGA+GGG - Chr8:3788147-3788166 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG + Chr8:3786197-3786216 MsG0880042108.01.T02:intron 40.0%
TTTGAAAGAAAGGGCTCATG+AGG - Chr8:3788148-3788167 None:intergenic 40.0%
TTTGGTCATGGAATAGAGGT+TGG - Chr8:3783914-3783933 None:intergenic 40.0%
! ACTGGACAAATTTGCTTAGG+TGG + Chr8:3787301-3787320 MsG0880042108.01.T02:intron 40.0%
! CAGCATCAGGATTTTTGTAG+CGG - Chr8:3781596-3781615 None:intergenic 40.0%
! CTTTTTGCTTCCCCTCAAAT+TGG + Chr8:3781976-3781995 MsG0880042108.01.T01:three_prime_UTR 40.0%
! GACACTTTTCGGTTTATGTC+AGG + Chr8:3784064-3784083 MsG0880042108.01.T02:intron 40.0%
! GCACTTGGTTCTCTCTAATA+TGG + Chr8:3786886-3786905 MsG0880042108.01.T02:intron 40.0%
! GTGACTGGACAAATTTGCTT+AGG + Chr8:3787298-3787317 MsG0880042108.01.T02:intron 40.0%
! GTTCATCAGCTCAATTTTGG+AGG - Chr8:3781639-3781658 None:intergenic 40.0%
! TCTGGCTTAATGAAAAGAGG+AGG + Chr8:3785451-3785470 MsG0880042108.01.T02:intron 40.0%
! TGGGTTCATCAGCTCAATTT+TGG - Chr8:3781642-3781661 None:intergenic 40.0%
! TTGTGTTGTTGATAGAGGGA+AGG - Chr8:3787731-3787750 None:intergenic 40.0%
! TTTTGCTTCCCCTCAAATTG+GGG + Chr8:3781978-3781997 MsG0880042108.01.T01:three_prime_UTR 40.0%
!! GGTGTTGCTTTGATTAGTTG+TGG + Chr8:3780892-3780911 MsG0880042108.01.T01:intron 40.0%
!! GTAAACTTTTTCTGTTGGGC+GGG + Chr8:3782459-3782478 MsG0880042108.01.T01:intron 40.0%
!! TAAACTTTTTCTGTTGGGCG+GGG + Chr8:3782460-3782479 MsG0880042108.01.T01:intron 40.0%
!! TGGATTTTGGAGGGTTTTGA+AGG + Chr8:3784232-3784251 MsG0880042108.01.T02:intron 40.0%
!! TTTTGCTAGGGGCGTAAAAA+TGG - Chr8:3781268-3781287 None:intergenic 40.0%
!!! ATGGCCAAGTTTTTTGGTCA+TGG - Chr8:3783926-3783945 None:intergenic 40.0%
!!! ATTGCACTGACTCCTTTTCA+AGG + Chr8:3786840-3786859 MsG0880042108.01.T02:intron 40.0%
!!! CAATTTTTAAGACAGGGGGA+TGG + Chr8:3781926-3781945 MsG0880042108.01.T01:three_prime_UTR 40.0%
!!! CCTGTCATTTGGTGGTTTTT+TGG + Chr8:3787198-3787217 MsG0880042108.01.T02:intron 40.0%
!!! GATTTGTTTTTGGGAAGGAG+TGG + Chr8:3782491-3782510 MsG0880042108.01.T01:intron 40.0%
!!! GATTTTGGAGGGTTTTGAAG+GGG + Chr8:3784234-3784253 MsG0880042108.01.T02:intron 40.0%
!!! GGATTTTGGAGGGTTTTGAA+GGG + Chr8:3784233-3784252 MsG0880042108.01.T02:intron 40.0%
!!! TTCTCTCACCGTTTTGATTC+CGG + Chr8:3780059-3780078 MsG0880042108.01.T01:five_prime_UTR 40.0%
AAAACCACCAAATGACAGGG+GGG - Chr8:3787197-3787216 None:intergenic 45.0%
AACGCCGCTGAACTCAAAAT+CGG + Chr8:3780232-3780251 MsG0880042108.01.T01:CDS 45.0%
AATGAGGTGGCACTTTGACT+TGG + Chr8:3787345-3787364 MsG0880042108.01.T02:intron 45.0%
ACAAGTGTTCCTTTCTTCCC+AGG + Chr8:3780013-3780032 MsG0880042108.01.T01:five_prime_UTR 45.0%
ACACCAGCATCTACTCATTC+AGG - Chr8:3785521-3785540 None:intergenic 45.0%
AGACCGGACAAATGTATCCA+TGG - Chr8:3784829-3784848 None:intergenic 45.0%
AGTGACGCAGAACGGAAAAA+AGG - Chr8:3785931-3785950 None:intergenic 45.0%
ATATTACGTAGGGGTCCGTT+TGG - Chr8:3782108-3782127 None:intergenic 45.0%
ATCCAAATCCCCCCAATTTG+AGG - Chr8:3781991-3782010 None:intergenic 45.0%
ATTCAAGCCAAACAGAACGC+AGG - Chr8:3780325-3780344 None:intergenic 45.0%
CAAAACGGTGAGAGAAGTTG+AGG - Chr8:3780055-3780074 None:intergenic 45.0%
CAATGTAACAGAAGGCTCAC+GGG - Chr8:3782931-3782950 None:intergenic 45.0%
CACAACCCAATTCGCAAAGA+GGG + Chr8:3784423-3784442 MsG0880042108.01.T02:intron 45.0%
CACCAGCATCTACTCATTCA+GGG - Chr8:3785520-3785539 None:intergenic 45.0%
CCACAACCAACATGTGAGAT+AGG - Chr8:3783209-3783228 None:intergenic 45.0%
CGAACTTGTCTAACAGCATC+AGG - Chr8:3781609-3781628 None:intergenic 45.0%
CGAGGAGGATTTGATAGAGA+TGG + Chr8:3783605-3783624 MsG0880042108.01.T01:three_prime_UTR 45.0%
CTCCTATCTGCAACAAAAGG+GGG + Chr8:3783745-3783764 MsG0880042108.01.T02:intron 45.0%
CTCCTATCTGCATCAAATGG+GGG + Chr8:3783705-3783724 MsG0880042108.01.T01:three_prime_UTR 45.0%
GAAGAAGGGGAGGGAAATAA+AGG + Chr8:3782569-3782588 MsG0880042108.01.T01:intron 45.0%
GAGAAGAGGAGGGAATCATA+AGG - Chr8:3787849-3787868 None:intergenic 45.0%
GAGGTCGATACTATCTAGCA+GGG + Chr8:3782694-3782713 MsG0880042108.01.T01:intron 45.0%
GCAGCTTCACACAACTCAAT+AGG - Chr8:3783277-3783296 None:intergenic 45.0%
GCTATCAGGGTTCAAAACCA+AGG - Chr8:3787276-3787295 None:intergenic 45.0%
GCTGAACTCAAAATCGGAGA+CGG + Chr8:3780238-3780257 MsG0880042108.01.T01:CDS 45.0%
GGAATCTTCTAATGGCAAGG+GGG - Chr8:3787255-3787274 None:intergenic 45.0%
GGGGAAGCAAAAAGTAGTCT+AGG - Chr8:3781970-3781989 None:intergenic 45.0%
GTGAATCATGTCTGGAGAAG+AGG + Chr8:3780204-3780223 MsG0880042108.01.T01:exon 45.0%
TAGCTTCCTCTACAGTTTCC+GGG - Chr8:3782387-3782406 None:intergenic 45.0%
TCACAACCCAATTCGCAAAG+AGG + Chr8:3784422-3784441 MsG0880042108.01.T02:intron 45.0%
TCCAAAAAGCTCCTCCAAAC+TGG - Chr8:3785484-3785503 None:intergenic 45.0%
TCCAAATCCCCCCAATTTGA+GGG - Chr8:3781990-3782009 None:intergenic 45.0%
TCCTATCTGCAACAAAAGGG+GGG + Chr8:3783746-3783765 MsG0880042108.01.T02:intron 45.0%
TCCTATCTGCATCAAATGGG+GGG + Chr8:3783706-3783725 MsG0880042108.01.T01:three_prime_UTR 45.0%
TCTCCCTTCGTTGAACCAAA+CGG + Chr8:3782090-3782109 MsG0880042108.01.T01:three_prime_UTR 45.0%
TGAGATCACAGTACACACAC+CGG + Chr8:3783785-3783804 MsG0880042108.01.T02:intron 45.0%
TGAGGGTGACATCCTTGAAA+AGG - Chr8:3786855-3786874 None:intergenic 45.0%
TGAGGTCGATACTATCTAGC+AGG + Chr8:3782693-3782712 MsG0880042108.01.T01:intron 45.0%
TGTCCAGTCACATGCTATCA+GGG - Chr8:3787289-3787308 None:intergenic 45.0%
TGTTAGAACTTCTCTCCCCA+TGG - Chr8:3785553-3785572 None:intergenic 45.0%
TTAGTTGTGGCCTATCACTG+TGG + Chr8:3780905-3780924 MsG0880042108.01.T01:intron 45.0%
TTATTGCAGCTGTGTGTCCT+AGG + Chr8:3782352-3782371 MsG0880042108.01.T01:intron 45.0%
TTCAAGCCAAACAGAACGCA+GGG - Chr8:3780324-3780343 None:intergenic 45.0%
TTCTTTCCCTGCGTTCTGTT+TGG + Chr8:3780315-3780334 MsG0880042108.01.T01:intron 45.0%
TTGACATGCAGACAAGAGGA+CGG + Chr8:3783367-3783386 MsG0880042108.01.T01:intron 45.0%
TTGTCCAGTCACATGCTATC+AGG - Chr8:3787290-3787309 None:intergenic 45.0%
TTTGCTTCCCCTCAAATTGG+GGG + Chr8:3781979-3781998 MsG0880042108.01.T01:three_prime_UTR 45.0%
! ACCAGTTTGGAGGAGCTTTT+TGG + Chr8:3785480-3785499 MsG0880042108.01.T02:intron 45.0%
! CCCCGCTCATTTGCTTTATT+AGG + Chr8:3786312-3786331 MsG0880042108.01.T02:intron 45.0%
! CCTATCTCACATGTTGGTTG+TGG + Chr8:3783206-3783225 MsG0880042108.01.T01:intron 45.0%
! GAAGTATTCTTGCACCCTTG+TGG + Chr8:3783136-3783155 MsG0880042108.01.T01:intron 45.0%
! GGTTTTTGTGACGTTCACCT+GGG - Chr8:3780033-3780052 None:intergenic 45.0%
! TCATTCAGGGCATCCTTGAT+GGG - Chr8:3785507-3785526 None:intergenic 45.0%
! TTGCGAATTGGGTTGTGAAG+CGG - Chr8:3784420-3784439 None:intergenic 45.0%
!! CTGGTGTTGTTGAATGCCAT+GGG + Chr8:3785534-3785553 MsG0880042108.01.T02:intron 45.0%
!! GTGGGATCTACTGATTCTAC+TGG - Chr8:3785072-3785091 None:intergenic 45.0%
!! TGGTGTTGTTGAATGCCATG+GGG + Chr8:3785535-3785554 MsG0880042108.01.T02:intron 45.0%
!!! GTCTCCGATTTTGAGTTCAG+CGG - Chr8:3780239-3780258 None:intergenic 45.0%
!! AAAAAAATTTCTTAAAAAAA+AGG - Chr8:3786608-3786627 None:intergenic 5.0%
!! AAAAAATTTCTTAAAAAAAA+GGG - Chr8:3786607-3786626 None:intergenic 5.0%
!!! AAAAAATTTCTTTTTTTTTA+TGG + Chr8:3785994-3786013 MsG0880042108.01.T02:intron 5.0%
!!! TAATTAATATTTTCATTAAT+TGG - Chr8:3784714-3784733 None:intergenic 5.0%
!!! TTTTAATAAAGAAATTTAAA+TGG - Chr8:3787402-3787421 None:intergenic 5.0%
AAAGGGCTCATGAGGGATTG+AGG - Chr8:3788140-3788159 None:intergenic 50.0%
AGAGGGAATCGATGGAGAAG+AGG - Chr8:3787863-3787882 None:intergenic 50.0%
ATTGGGGGGATTTGGATGTG+AGG + Chr8:3781994-3782013 MsG0880042108.01.T01:three_prime_UTR 50.0%
CACTTAGGGTCGGTTAGGTA+AGG - Chr8:3780465-3780484 None:intergenic 50.0%
CCAAATCCCCCCAATTTGAG+GGG - Chr8:3781989-3782008 None:intergenic 50.0%
CCTATCACTGTGGTCCTATC+AGG + Chr8:3780915-3780934 MsG0880042108.01.T01:intron 50.0%
CCTGATAGGACCACAGTGAT+AGG - Chr8:3780918-3780937 None:intergenic 50.0%
CGGACCCTAAAAGCAAACAC+AGG - Chr8:3781851-3781870 None:intergenic 50.0%
GAACCCTGATAGCATGTGAC+TGG + Chr8:3787283-3787302 MsG0880042108.01.T02:intron 50.0%
GGAATCGATGGAGAAGAGGA+GGG - Chr8:3787859-3787878 None:intergenic 50.0%
GGGTGTCCTGGAAAAGAGAA+GGG - Chr8:3787485-3787504 None:intergenic 50.0%
TCCTGGAAAAGAGAAGGGAG+AGG - Chr8:3787480-3787499 None:intergenic 50.0%
TCTTTGCCCGGAAACTGTAG+AGG + Chr8:3782378-3782397 MsG0880042108.01.T01:three_prime_UTR 50.0%
TGACATGCAGACAAGAGGAC+GGG + Chr8:3783368-3783387 MsG0880042108.01.T01:intron 50.0%
TGACGTTCACCTGGGAAGAA+AGG - Chr8:3780025-3780044 None:intergenic 50.0%
TGCATGAGACTGTGTGTGGT+AGG + Chr8:3783635-3783654 MsG0880042108.01.T01:three_prime_UTR 50.0%
TGCCCTGAATGAGTAGATGC+TGG + Chr8:3785515-3785534 MsG0880042108.01.T02:intron 50.0%
TGGAAAAGAGAAGGGAGAGG+TGG - Chr8:3787477-3787496 None:intergenic 50.0%
TGTCCTAGGCAATCTTTGCC+CGG + Chr8:3782366-3782385 MsG0880042108.01.T01:three_prime_UTR 50.0%
TTGAGAGTTGCTGAAGGGGA+GGG + Chr8:3781876-3781895 MsG0880042108.01.T01:three_prime_UTR 50.0%
TTGCTTCCCCTCAAATTGGG+GGG + Chr8:3781980-3781999 MsG0880042108.01.T01:three_prime_UTR 50.0%
TTTCCGGGCAAAGATTGCCT+AGG - Chr8:3782372-3782391 None:intergenic 50.0%
! ACCTCTCCCTTCTCTTTTCC+AGG + Chr8:3787476-3787495 MsG0880042108.01.T02:intron 50.0%
! AGGGTGTCCTGGAAAAGAGA+AGG - Chr8:3787486-3787505 None:intergenic 50.0%
! CTCATTCAGGGCATCCTTGA+TGG - Chr8:3785508-3785527 None:intergenic 50.0%
! GCTTTTACCCCCCTGTCATT+TGG + Chr8:3787187-3787206 MsG0880042108.01.T02:intron 50.0%
! GGAGCTTTTTGGACCCATCA+AGG + Chr8:3785491-3785510 MsG0880042108.01.T02:intron 50.0%
! GGGTTTTTGTGACGTTCACC+TGG - Chr8:3780034-3780053 None:intergenic 50.0%
! GGTCCGTTTGGTTCAACGAA+GGG - Chr8:3782096-3782115 None:intergenic 50.0%
! TGGGAAGGAGTGGTGATGTT+AGG + Chr8:3782501-3782520 MsG0880042108.01.T01:intron 50.0%
! TTTAAGACAGGGGGATGGGA+GGG + Chr8:3781931-3781950 MsG0880042108.01.T01:three_prime_UTR 50.0%
! TTTACCCCCCTGTCATTTGG+TGG + Chr8:3787190-3787209 MsG0880042108.01.T02:intron 50.0%
!! GCTGGTGTTGTTGAATGCCA+TGG + Chr8:3785533-3785552 MsG0880042108.01.T02:intron 50.0%
!!! TTTTAAGACAGGGGGATGGG+AGG + Chr8:3781930-3781949 MsG0880042108.01.T01:three_prime_UTR 50.0%
AGAAAACTCGTGCGACGCAC+GGG + Chr8:3786685-3786704 MsG0880042108.01.T02:intron 55.0%
ATGGCGAGAGAGGGAATCGA+TGG - Chr8:3787871-3787890 None:intergenic 55.0%
CCCCTCAAATTGGGGGGATT+TGG + Chr8:3781986-3782005 MsG0880042108.01.T01:three_prime_UTR 55.0%
GAGAAAACTCGTGCGACGCA+CGG + Chr8:3786684-3786703 MsG0880042108.01.T02:intron 55.0%
GCCCCCCATTTGATGCAGAT+AGG - Chr8:3783710-3783729 None:intergenic 55.0%
GGGAATCGATGGAGAAGAGG+AGG - Chr8:3787860-3787879 None:intergenic 55.0%
GTGGTGCATGAGACTGTGTG+TGG + Chr8:3783631-3783650 MsG0880042108.01.T01:three_prime_UTR 55.0%
GTTGAGAGTTGCTGAAGGGG+AGG + Chr8:3781875-3781894 MsG0880042108.01.T01:three_prime_UTR 55.0%
TCTTGCACCCTTGTGGATCG+TGG + Chr8:3783143-3783162 MsG0880042108.01.T01:intron 55.0%
TGAGAGTTGCTGAAGGGGAG+GGG + Chr8:3781877-3781896 MsG0880042108.01.T01:three_prime_UTR 55.0%
! CGAATTGGGTTGTGAAGCGG+AGG - Chr8:3784417-3784436 None:intergenic 55.0%
! GCCCCCCTTTTGTTGCAGAT+AGG - Chr8:3783750-3783769 None:intergenic 55.0%
! GGGTCCGTTTGGTTCAACGA+AGG - Chr8:3782097-3782116 None:intergenic 55.0%
!! TTGGGAAGAAGAGGGTGTCC+TGG - Chr8:3787497-3787516 None:intergenic 55.0%
GAGGAGGCAGAGGACCAGTT+TGG + Chr8:3785467-3785486 MsG0880042108.01.T02:intron 60.0%
GAGGCAGAGGACCAGTTTGG+AGG + Chr8:3785470-3785489 MsG0880042108.01.T02:intron 60.0%
TCTGTTGGGCGGGGATGAGA+AGG + Chr8:3782469-3782488 MsG0880042108.01.T01:intron 60.0%
! GCAGACAAGAGGACGGGCTC+AGG + Chr8:3783374-3783393 MsG0880042108.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 3780006 3788347 3780006 ID=MsG0880042108.01;Name=MsG0880042108.01
Chr8 mRNA 3780006 3783741 3780006 ID=MsG0880042108.01.T01;Parent=MsG0880042108.01;Name=MsG0880042108.01.T01;_AED=0.38;_eAED=0.38;_QI=93|1|1|1|0.5|0.28|7|960|85
Chr8 exon 3780006 3780080 3780006 ID=MsG0880042108.01.T01:exon:1616;Parent=MsG0880042108.01.T01
Chr8 exon 3780193 3780259 3780193 ID=MsG0880042108.01.T01:exon:1617;Parent=MsG0880042108.01.T01
Chr8 exon 3781098 3781206 3781098 ID=MsG0880042108.01.T01:exon:1618;Parent=MsG0880042108.01.T01
Chr8 exon 3781554 3781718 3781554 ID=MsG0880042108.01.T01:exon:1619;Parent=MsG0880042108.01.T01
Chr8 exon 3781773 3782234 3781773 ID=MsG0880042108.01.T01:exon:1620;Parent=MsG0880042108.01.T01
Chr8 exon 3782361 3782429 3782361 ID=MsG0880042108.01.T01:exon:1621;Parent=MsG0880042108.01.T01
Chr8 exon 3783378 3783741 3783378 ID=MsG0880042108.01.T01:exon:1622;Parent=MsG0880042108.01.T01
Chr8 five_prime_UTR 3780006 3780080 3780006 ID=MsG0880042108.01.T01:five_prime_utr;Parent=MsG0880042108.01.T01
Chr8 five_prime_UTR 3780193 3780210 3780193 ID=MsG0880042108.01.T01:five_prime_utr;Parent=MsG0880042108.01.T01
Chr8 CDS 3780211 3780259 3780211 ID=MsG0880042108.01.T01:cds;Parent=MsG0880042108.01.T01
Chr8 CDS 3781098 3781206 3781098 ID=MsG0880042108.01.T01:cds;Parent=MsG0880042108.01.T01
Chr8 CDS 3781554 3781653 3781554 ID=MsG0880042108.01.T01:cds;Parent=MsG0880042108.01.T01
Chr8 three_prime_UTR 3781654 3781718 3781654 ID=MsG0880042108.01.T01:three_prime_utr;Parent=MsG0880042108.01.T01
Chr8 three_prime_UTR 3781773 3782234 3781773 ID=MsG0880042108.01.T01:three_prime_utr;Parent=MsG0880042108.01.T01
Chr8 three_prime_UTR 3782361 3782429 3782361 ID=MsG0880042108.01.T01:three_prime_utr;Parent=MsG0880042108.01.T01
Chr8 three_prime_UTR 3783378 3783741 3783378 ID=MsG0880042108.01.T01:three_prime_utr;Parent=MsG0880042108.01.T01
Chr8 mRNA 3781750 3788347 3781750 ID=MsG0880042108.01.T02;Parent=MsG0880042108.01;Name=MsG0880042108.01.T02;_AED=0.47;_eAED=0.85;_QI=0|0.25|0|1|0.25|0.4|5|0|127
Chr8 exon 3781750 3781766 3781750 ID=MsG0880042108.01.T02:exon:1623;Parent=MsG0880042108.01.T02
Chr8 exon 3781937 3782015 3781937 ID=MsG0880042108.01.T02:exon:1624;Parent=MsG0880042108.01.T02
Chr8 exon 3782178 3782234 3782178 ID=MsG0880042108.01.T02:exon:1625;Parent=MsG0880042108.01.T02
Chr8 exon 3782361 3782458 3782361 ID=MsG0880042108.01.T02:exon:1626;Parent=MsG0880042108.01.T02
Chr8 exon 3788215 3788347 3788215 ID=MsG0880042108.01.T02:exon:1627;Parent=MsG0880042108.01.T02
Chr8 CDS 3781750 3781766 3781750 ID=MsG0880042108.01.T02:cds;Parent=MsG0880042108.01.T02
Chr8 CDS 3781937 3782015 3781937 ID=MsG0880042108.01.T02:cds;Parent=MsG0880042108.01.T02
Chr8 CDS 3782178 3782234 3782178 ID=MsG0880042108.01.T02:cds;Parent=MsG0880042108.01.T02
Chr8 CDS 3782361 3782458 3782361 ID=MsG0880042108.01.T02:cds;Parent=MsG0880042108.01.T02
Chr8 CDS 3788215 3788347 3788215 ID=MsG0880042108.01.T02:cds;Parent=MsG0880042108.01.T02
Gene Sequence

>MsG0880042108.01.T01

ATGTCTGGAGAAGAGGAAGAAAACGCCGCTGAACTCAAAATCGGAGACGAGTTTTTGAAAGCAAAGTGCTTGATGAACTGTGAAGTTTCATTAATTCTGGAGCACAAATATGAGCAGCTTCAGCAGTCGTCTGATGATGCCATGAATCAAGTTTCTCAGGTATTTGAAAAGTCATTGCAGTATGTGAAACGTTTCAGCCGCTACAAAAATCCTGATGCTGTTAGACAAGTTCGAGAGTATCCTCCAAAATTGAGCTGA

>MsG0880042108.01.T02

ATGAAAATTGTGTTGGGACAGGGGGATGGGAGGGAATCAAAACCCCTCCTAGACTACTTTTTGCTTCCCCTCAAATTGGGGGGATTTGGATGTGAGATTGTGATCTTAACTGGCTTAAGAATTCTCGCTAGATATCAGTTGGCTGAATTTGAGCTGTGTGTCCTAGGCAATCTTTGCCCGGAAACTGTAGAGGAAGCTATTGCTATGGTTCCATCTATCAAGGTAGAAATAATTTGCTTCTCCTTCTTTCTAGATTGGGAAGACAAGATATTTGAGGAAATTGATGATTTTGATGAATCTGAGAAATCTGGAGATTTGAAAATTTTAGGGGTTTCTAAAATTGTTGATTATGAGAAATTTGGAATTGGATTGAAGAAGGCATAA

Protein sequence

>MsG0880042108.01.T01

MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQSSDDAMNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREYPPKLS*

>MsG0880042108.01.T02

MKIVLGQGDGRESKPLLDYFLLPLKLGGFGCEIVILTGLRILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKVEIICFSFFLDWEDKIFEEIDDFDESEKSGDLKILGVSKIVDYEKFGIGLKKA*