AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180002459.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002459.01.T01 MTR_1g050760 75.628 398 30 4 24 356 42 437 0.0 566
MsG0180002459.01.T01 MTR_1g050760 80.556 324 26 3 68 356 1 322 0.0 504
MsG0180002459.01.T01 MTR_4g120880 47.273 110 56 2 73 181 163 271 4.62e-24 100
MsG0180002459.01.T01 MTR_4g120880 47.273 110 56 2 73 181 163 271 5.03e-24 101
MsG0180002459.01.T01 MTR_4g067300 46.552 116 62 0 73 188 136 251 3.00e-23 100
MsG0180002459.01.T01 MTR_1g475240 34.574 188 114 5 72 253 591 775 6.71e-22 97.8
MsG0180002459.01.T01 MTR_1g075190 34.574 188 114 5 72 253 591 775 6.71e-22 97.8
MsG0180002459.01.T01 MTR_6g004480 53.333 105 49 0 81 185 123 227 1.92e-20 93.2
MsG0180002459.01.T01 MTR_4g126140 44.304 79 44 0 106 184 586 664 1.96e-14 75.1
MsG0180002459.01.T01 MTR_6g008410 33.813 139 86 4 56 193 505 638 3.74e-14 74.3
MsG0180002459.01.T01 MTR_6g084410 35.088 114 73 1 72 184 582 695 7.53e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002459.01.T01 AT3G25440 47.573 309 135 8 67 354 70 372 4.48e-75 237
MsG0180002459.01.T01 AT3G25440 47.573 309 135 8 67 354 134 436 1.42e-74 238
MsG0180002459.01.T01 AT3G25440 47.552 286 123 8 90 354 2 281 7.13e-70 220
MsG0180002459.01.T01 AT3G25440 47.552 286 123 8 90 354 2 281 7.13e-70 220
MsG0180002459.01.T01 AT3G25440 47.552 286 123 8 90 354 2 281 7.13e-70 220
MsG0180002459.01.T01 AT2G28480 42.537 134 73 1 59 188 109 242 5.31e-25 104
MsG0180002459.01.T01 AT4G13070 46.018 113 60 1 73 184 145 257 8.03e-24 100
MsG0180002459.01.T01 AT3G27550 49.524 105 53 0 81 185 119 223 1.06e-19 90.9
MsG0180002459.01.T01 AT3G27550 49.524 105 53 0 81 185 63 167 1.35e-19 90.1
MsG0180002459.01.T01 AT3G27550 49.524 105 53 0 81 185 63 167 1.35e-19 90.1
MsG0180002459.01.T01 AT3G23070 35.669 157 89 4 72 221 599 750 1.43e-19 90.9
MsG0180002459.01.T01 AT4G14510 36.296 135 85 1 51 184 605 739 1.21e-18 87.8
MsG0180002459.01.T01 AT4G29750 38.053 113 66 2 72 184 613 721 1.13e-15 79.0
MsG0180002459.01.T01 AT4G29750 38.053 113 66 2 72 184 613 721 1.43e-15 78.6
MsG0180002459.01.T01 AT3G18390 35.965 114 72 1 72 184 614 727 1.64e-14 75.5
MsG0180002459.01.T01 AT3G01370 33.028 109 72 1 77 184 545 653 1.94e-12 68.9

Find 60 sgRNAs with CRISPR-Local

Find 331 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTCACTTTGTCACTTATT+TGG 0.094749 1:+38646299 None:intergenic
GGAGGAGAAACCTCTTTATT+TGG 0.187927 1:-38646098 MsG0180002459.01.T01:CDS
TCATGATTATACTTCGAAAA+TGG 0.229572 1:+38648948 None:intergenic
TTCGAGCTCTTGCTCGAGTT+TGG 0.272822 1:+38646380 None:intergenic
CTGGTCAACTTTATCAAACT+TGG 0.294449 1:+38645964 None:intergenic
TCGAGCTCTTGCTCGAGTTT+GGG 0.335338 1:+38646381 None:intergenic
AGATTCAGATACAGAGGATT+TGG 0.340696 1:-38646125 MsG0180002459.01.T01:CDS
GGCACATATGGACTCTGATT+TGG 0.341724 1:-38646185 MsG0180002459.01.T01:CDS
CTTTATCTAGTTTCTCTAGT+TGG 0.373283 1:+38646251 None:intergenic
CTCGGAGGATGAGGCACATA+TGG 0.401335 1:-38646197 MsG0180002459.01.T01:CDS
ATGCAGCACGTAGGAAAATC+TGG 0.421146 1:+38645945 None:intergenic
ACTGAGCTGGCAAGATTGAC+TGG 0.443729 1:-38647331 MsG0180002459.01.T01:CDS
TAAATTCCTCTTCTTCCAAC+TGG 0.446845 1:+38647454 None:intergenic
TTAAATTCGTCCAAATAAAG+AGG 0.451757 1:+38646088 None:intergenic
TTCGAAGTATAATCATGATA+AGG 0.457159 1:-38648943 MsG0180002459.01.T01:CDS
GACATCACCATCAAATCCTT+AGG 0.461609 1:+38648909 None:intergenic
TAGAAGGAAGGTTCAATTGA+TGG 0.466408 1:+38649009 None:intergenic
CCTACTCGTGTAGAAGTAGA+AGG 0.468381 1:+38648993 None:intergenic
AGAACAACCTAAGGATTTGA+TGG 0.478976 1:-38648916 MsG0180002459.01.T01:CDS
TGGAGATTTGAAACACTACT+TGG 0.485963 1:+38646271 None:intergenic
AACGACGAGGAGAAAATTGA+AGG 0.494552 1:-38648880 MsG0180002459.01.T01:CDS
CAACGGTTGCTCGGAGGATG+AGG 0.494561 1:-38646206 MsG0180002459.01.T01:CDS
ATTGTTTCTGATGATTCTGT+AGG 0.503591 1:+38647553 None:intergenic
GTATCTCCATCACTTTGCTC+AGG 0.513495 1:+38646058 None:intergenic
GCGTCAATATCTCAGGATCA+TGG 0.513687 1:+38647530 None:intergenic
TAAGGAGATTGCCACTGAGC+TGG 0.515928 1:-38647344 MsG0180002459.01.T01:CDS
TCTTCTGGCGTCAATATCTC+AGG 0.519559 1:+38647523 None:intergenic
CAGAATCGTTGTTGTTGTTG+TGG 0.520175 1:-38651153 MsG0180002459.01.T01:CDS
AGATACAGAGGATTTGGTAA+AGG 0.527087 1:-38646119 MsG0180002459.01.T01:CDS
TGGTCAACTTTATCAAACTT+GGG 0.527911 1:+38645965 None:intergenic
CTAGAGAAACTAGATAAAGT+TGG 0.528664 1:-38646247 MsG0180002459.01.T01:CDS
TAATGATAACAACGGTTGCT+CGG 0.533853 1:-38646215 MsG0180002459.01.T01:CDS
TACAGAGGATTTGGTAAAGG+AGG 0.540667 1:-38646116 MsG0180002459.01.T01:CDS
TATGTGCCAGTTGGAAGAAG+AGG 0.545414 1:-38647460 MsG0180002459.01.T01:CDS
TTGACTGGAGGTATAGTGCT+TGG 0.552204 1:-38647316 MsG0180002459.01.T01:CDS
ATGGAGTTGAATGAAAACTT+AGG 0.559747 1:+38648967 None:intergenic
CCTTCTACTTCTACACGAGT+AGG 0.569886 1:-38648993 MsG0180002459.01.T01:CDS
TAAGGTCGTAGAACAACCTA+AGG 0.588611 1:-38648925 MsG0180002459.01.T01:CDS
GCATGTTCAAAATTACACCT+TGG 0.591409 1:+38647431 None:intergenic
ACGACGAGGAGAAAATTGAA+GGG 0.594388 1:-38648879 MsG0180002459.01.T01:CDS
TGAGACAGATTCAGATACAG+AGG 0.595778 1:-38646131 MsG0180002459.01.T01:CDS
AAGTAACACAGAAGCAGCTG+AGG 0.599302 1:-38646326 MsG0180002459.01.T01:CDS
TTGTTGTGGTCATGAGGCGG+AGG 0.610691 1:-38651139 MsG0180002459.01.T01:CDS
CTCGTGTAGAAGTAGAAGGA+AGG 0.614601 1:+38648997 None:intergenic
ACATCAAACTTTGCAAGTGG+TGG 0.616673 1:-38647392 MsG0180002459.01.T01:CDS
AGTGCTTGGCATTCATGAAG+AGG 0.621574 1:-38647302 MsG0180002459.01.T01:CDS
TTGTTGTTGTTGTGGTCATG+AGG 0.621998 1:-38651145 MsG0180002459.01.T01:CDS
GAAACATCAAACTTTGCAAG+TGG 0.622225 1:-38647395 MsG0180002459.01.T01:CDS
TTGTTGTTGTGGTCATGAGG+CGG 0.631919 1:-38651142 MsG0180002459.01.T01:CDS
GGGATGGCCTCCGCGCTGTG+AGG 0.644794 1:-38646413 MsG0180002459.01.T01:CDS
TTTAAAATGATGCAGCACGT+AGG 0.656277 1:+38645936 None:intergenic
AGTAACACAGAAGCAGCTGA+GGG 0.657144 1:-38646325 MsG0180002459.01.T01:CDS
GGAAGAAGAGGAATTTACCA+AGG 0.659024 1:-38647448 MsG0180002459.01.T01:CDS
AGTCAATCTTGCCAGCTCAG+TGG 0.683540 1:+38647333 None:intergenic
TGATAACAACGGTTGCTCGG+AGG 0.692533 1:-38646212 MsG0180002459.01.T01:CDS
TATATCTCCTCACAGCGCGG+AGG 0.707405 1:+38646406 None:intergenic
GAGCTGGCAAGATTGACTGG+AGG 0.723328 1:-38647328 MsG0180002459.01.T01:CDS
GAATATATCTCCTCACAGCG+CGG 0.729557 1:+38646403 None:intergenic
TGATGTCAAAAGTAACGACG+AGG 0.760579 1:-38648893 MsG0180002459.01.T01:CDS
GCAATGTTTAATGATAACAA+CGG 0.770118 1:-38646223 MsG0180002459.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTATTATAAAAAAAATT+AGG - Chr1:38646621-38646640 MsG0180002459.01.T01:intron 0.0%
!!! AATTTTTTTTATAATAAATT+AGG + Chr1:38646621-38646640 None:intergenic 0.0%
!! TTATATATAATAATCATTTC+AGG - Chr1:38648005-38648024 MsG0180002459.01.T01:intron 10.0%
!!! AATATGAAATCTTTAAAATA+AGG + Chr1:38648474-38648493 None:intergenic 10.0%
!!! AATTTTATACAAGTTATTAA+AGG - Chr1:38648343-38648362 MsG0180002459.01.T01:intron 10.0%
!!! ACACTTTTTTTTTTTTTTTT+TGG - Chr1:38646319-38646338 MsG0180002459.01.T01:CDS 10.0%
!!! ATTGTAATTTTATAACTTTT+AGG + Chr1:38649145-38649164 None:intergenic 10.0%
!!! TACTTTTTGTTTTTAAATTA+CGG + Chr1:38648568-38648549 None:intergenic 10.0%
!! ATCACTAATTAAAAAGAATA+AGG + Chr1:38647029-38647048 None:intergenic 15.0%
!! ATTGGATAAATCAAAATATA+GGG - Chr1:38650684-38650703 MsG0180002459.01.T01:intron 15.0%
!! TATAAGTATCTAATCTTAAA+TGG - Chr1:38649114-38649133 MsG0180002459.01.T01:intron 15.0%
!!! AAAAAATGGTCTATTTTTTT+TGG - Chr1:38646998-38647017 MsG0180002459.01.T01:intron 15.0%
!!! ATTTCATATTTTTACTCTTA+GGG - Chr1:38648484-38648503 MsG0180002459.01.T01:intron 15.0%
!!! ATTTTTATTTTTCCAAAAGA+AGG + Chr1:38650344-38650363 MsG0180002461.01.T01:intron 15.0%
!!! ATTTTTTTAGTTTGCATTTA+AGG + Chr1:38646780-38646799 None:intergenic 15.0%
!!! CATTTTTTTCATTATTTCAA+AGG + Chr1:38646986-38647005 None:intergenic 15.0%
!!! CTTTGAAATAATGAAAAAAA+TGG - Chr1:38646984-38647003 MsG0180002459.01.T01:intron 15.0%
!!! CTTTTGGAAAAATAAAAATT+TGG - Chr1:38650345-38650364 MsG0180002459.01.T01:intron 15.0%
!!! TTTAACTCTCATTTATTTTT+GGG + Chr1:38646579-38646598 None:intergenic 15.0%
!!! TTTTAACTCTCATTTATTTT+TGG + Chr1:38646580-38646599 None:intergenic 15.0%
!!! TTTTTATTTTTCCAAAAGAA+GGG + Chr1:38650343-38650362 MsG0180002461.01.T01:intron 15.0%
!! AAAATGAAGATGAATAGAAA+AGG - Chr1:38646146-38646165 MsG0180002459.01.T01:CDS 20.0%
!! AAATTTCTTCATACTATTCT+AGG - Chr1:38650000-38650019 MsG0180002459.01.T01:intron 20.0%
!! AGTATGAAAAAGTTCAAAAT+TGG + Chr1:38650603-38650622 MsG0180002461.01.T01:intron 20.0%
!! ATAAGTCACTATTTAATCAT+AGG - Chr1:38647390-38647409 MsG0180002459.01.T01:CDS 20.0%
!! ATACTTATAAGTTAATTCGT+AGG + Chr1:38646898-38646917 None:intergenic 20.0%
!! ATATATTCCAAGTTTCAAAA+TGG - Chr1:38646038-38646057 MsG0180002459.01.T01:CDS 20.0%
!! CATTGGATAAATCAAAATAT+AGG - Chr1:38650683-38650702 MsG0180002459.01.T01:intron 20.0%
!! TGTGAATAAAAAAACAGATT+TGG - Chr1:38649954-38649973 MsG0180002459.01.T01:intron 20.0%
!!! ACACTTTTTCTTCTTAAAAA+TGG - Chr1:38649617-38649636 MsG0180002459.01.T01:intron 20.0%
!!! CACTTTTTCTTCTTAAAAAT+GGG - Chr1:38649618-38649637 MsG0180002459.01.T01:intron 20.0%
!!! GAATTATTTCTTTCTAATGT+AGG - Chr1:38649494-38649513 MsG0180002459.01.T01:intron 20.0%
!!! GATTTCATATTTTTACTCTT+AGG - Chr1:38648483-38648502 MsG0180002459.01.T01:intron 20.0%
!!! TTAAAATAAGGTGTTAAAGT+AGG + Chr1:38648462-38648481 None:intergenic 20.0%
! AAACACGATACAATTAGAAA+TGG + Chr1:38650372-38650391 MsG0180002461.01.T01:intron 25.0%
! AACAATGGTTAATGTTATCT+TGG - Chr1:38648936-38648955 MsG0180002459.01.T01:CDS 25.0%
! AACTTGTAGATAGAAATTCT+AGG + Chr1:38649033-38649052 None:intergenic 25.0%
! AAGTGAAATTTATTGACAAG+CGG + Chr1:38647862-38647881 None:intergenic 25.0%
! AATTGAATTGCCTTATGATA+TGG - Chr1:38647183-38647202 MsG0180002459.01.T01:intron 25.0%
! ACAACTTTATCAATAGACTA+AGG + Chr1:38648745-38648764 None:intergenic 25.0%
! AGATTAGATACTTATATCAG+AGG + Chr1:38649110-38649129 None:intergenic 25.0%
! AGTATCTAATCTTAAATGGA+AGG - Chr1:38649118-38649137 MsG0180002459.01.T01:intron 25.0%
! ATATACCATATATAGATCCA+AGG + Chr1:38650515-38650534 MsG0180002461.01.T01:intron 25.0%
! ATGAATAGAAAAGGTGAAAA+GGG - Chr1:38646155-38646174 MsG0180002459.01.T01:CDS 25.0%
! CAACTTTATCAATAGACTAA+GGG + Chr1:38648744-38648763 None:intergenic 25.0%
! CAAGTGATGTTCATAAATTA+AGG - Chr1:38647597-38647616 MsG0180002459.01.T01:CDS 25.0%
! GAGATAAAAACCAAAAATGA+TGG + Chr1:38649354-38649373 None:intergenic 25.0%
! GATAAATCAAAATATAGGGA+TGG - Chr1:38650688-38650707 MsG0180002459.01.T01:intron 25.0%
! GCAATGTTTAATGATAACAA+CGG - Chr1:38650894-38650913 MsG0180002459.01.T01:intron 25.0%
! GGAATATATGTTTGTTTACA+GGG + Chr1:38646027-38646046 None:intergenic 25.0%
! TCATGATTATACTTCGAAAA+TGG + Chr1:38648172-38648191 None:intergenic 25.0%
! TCGAAAAATAGTGATGTATT+TGG - Chr1:38650220-38650239 MsG0180002459.01.T01:intron 25.0%
! TGGAATATATGTTTGTTTAC+AGG + Chr1:38646028-38646047 None:intergenic 25.0%
! TGTTATTGACAGAATATCAA+TGG + Chr1:38650119-38650138 None:intergenic 25.0%
! TTAAATTCGTCCAAATAAAG+AGG + Chr1:38651032-38651051 MsG0180002461.01.T01:intron 25.0%
! TTATAACAGAAATATCAAGC+AGG + Chr1:38649257-38649276 None:intergenic 25.0%
! TTCGAAGTATAATCATGATA+AGG - Chr1:38648174-38648193 MsG0180002459.01.T01:intron 25.0%
! TTTATCAGCTTAAATGACAA+TGG + Chr1:38650153-38650172 None:intergenic 25.0%
!! AAAAAAGAAGAAGAGAGTTT+TGG - Chr1:38647728-38647747 MsG0180002459.01.T01:intron 25.0%
!! ATCAATTTAAGGTGACATTT+AGG + Chr1:38647546-38647565 None:intergenic 25.0%
!! ATCATACAACTCTAAAAACA+TGG - Chr1:38651112-38651131 MsG0180002459.01.T01:intron 25.0%
!! ATTTTTACTGTCCTTTTTGA+AGG - Chr1:38649002-38649021 MsG0180002459.01.T01:CDS 25.0%
!! TAAGGAATTTAAACTTTTGC+AGG + Chr1:38646762-38646781 None:intergenic 25.0%
!! TCAATTTAAGGTGACATTTA+GGG + Chr1:38647545-38647564 None:intergenic 25.0%
!! TGAAATAAATACCTTGTTTG+CGG + Chr1:38647918-38647937 None:intergenic 25.0%
!! TGACAGCTTTGATTTAATAA+TGG + Chr1:38649300-38649319 None:intergenic 25.0%
!! TGGTTGTTTCAACAAATAAA+TGG - Chr1:38646058-38646077 MsG0180002459.01.T01:CDS 25.0%
!! TGTTACATAAGCAATTTTGA+AGG + Chr1:38647976-38647995 None:intergenic 25.0%
!!! GAAAGTACTAGATCTTATAT+AGG - Chr1:38647299-38647318 MsG0180002459.01.T01:CDS 25.0%
AACATAAAAACATGTGAGAG+AGG - Chr1:38647146-38647165 MsG0180002459.01.T01:intron 30.0%
AAGGAAGAAGAATTTCCTTA+TGG + Chr1:38647517-38647536 None:intergenic 30.0%
AATAAAATGAGAGTAACCCA+AGG + Chr1:38650659-38650678 MsG0180002461.01.T01:intron 30.0%
ACATAAAAACATGTGAGAGA+GGG - Chr1:38647147-38647166 MsG0180002459.01.T01:intron 30.0%
AGAAGAAGAAAGAGTTTCAA+AGG - Chr1:38648304-38648323 MsG0180002459.01.T01:intron 30.0%
AGATTAGCATTTGGGAAAAT+TGG - Chr1:38650036-38650055 MsG0180002459.01.T01:intron 30.0%
AGGAAGAAGAATTTCCTTAT+GGG + Chr1:38647516-38647535 None:intergenic 30.0%
AGGACAATAATAATGTACAG+AGG - Chr1:38649835-38649854 MsG0180002459.01.T01:intron 30.0%
ATAGCATTTATTTGCAACCT+TGG - Chr1:38650495-38650514 MsG0180002459.01.T01:intron 30.0%
ATAGCCTTTGTGTAAAAATC+AGG - Chr1:38648802-38648821 MsG0180002459.01.T01:intron 30.0%
ATCTATTGTAAGGCTTAAGA+GGG + Chr1:38647463-38647482 None:intergenic 30.0%
ATGGAGTTGAATGAAAACTT+AGG + Chr1:38648153-38648172 None:intergenic 30.0%
ATTGCATACAATACACCAAA+TGG - Chr1:38648830-38648849 MsG0180002459.01.T01:intron 30.0%
ATTTCTTTCTAATGTAGGCT+CGG - Chr1:38649499-38649518 MsG0180002459.01.T01:intron 30.0%
CGAAGCAATCTTTATTGTTT+GGG + Chr1:38650417-38650436 MsG0180002461.01.T01:intron 30.0%
CTAGAGAAACTAGATAAAGT+TGG - Chr1:38650870-38650889 MsG0180002459.01.T01:intron 30.0%
CTATAATTAACACATTGCAG+AGG + Chr1:38650479-38650498 MsG0180002461.01.T01:intron 30.0%
CTTGAACTATGTTATATGCA+AGG - Chr1:38648069-38648088 MsG0180002459.01.T01:intron 30.0%
GATGAATAGAAAAGGTGAAA+AGG - Chr1:38646154-38646173 MsG0180002459.01.T01:CDS 30.0%
GCGAATTTATCCATATCATA+AGG + Chr1:38647196-38647215 None:intergenic 30.0%
GGACAATAATAATGTACAGA+GGG - Chr1:38649836-38649855 MsG0180002459.01.T01:intron 30.0%
TAAAAGGAAGAAGATGCAAA+GGG + Chr1:38650320-38650339 MsG0180002461.01.T01:intron 30.0%
TATGTTTGTTTACAGGGTTA+TGG + Chr1:38646021-38646040 None:intergenic 30.0%
TATTGTTTGGGCAATCTTTA+GGG + Chr1:38650405-38650424 MsG0180002461.01.T01:intron 30.0%
TCAACTCTTCAATTCTTAAG+AGG + Chr1:38647244-38647263 None:intergenic 30.0%
TGAATAGAAAAGGTGAAAAG+GGG - Chr1:38646156-38646175 MsG0180002459.01.T01:CDS 30.0%
TGGTCAACTTTATCAAACTT+GGG + Chr1:38651155-38651174 MsG0180002461.01.T01:intron 30.0%
TTATGAACATCACTTGTGTA+AGG + Chr1:38647593-38647612 None:intergenic 30.0%
TTATTGTTTGGGCAATCTTT+AGG + Chr1:38650406-38650425 MsG0180002461.01.T01:intron 30.0%
TTGCAGGATAGAATTCTATA+AGG + Chr1:38646746-38646765 None:intergenic 30.0%
TTTAGTGCAACTGATATTCT+TGG - Chr1:38648888-38648907 MsG0180002459.01.T01:CDS 30.0%
! AAGTAGCGTTTGAAAACTTT+TGG - Chr1:38646924-38646943 MsG0180002459.01.T01:intron 30.0%
! ACATTTACTTGCTAATGACT+TGG + Chr1:38647657-38647676 None:intergenic 30.0%
! AGCTTTGATTTAATAATGGC+AGG + Chr1:38649296-38649315 None:intergenic 30.0%
! ATAAGGTACTAAACATGATG+TGG + Chr1:38646729-38646748 None:intergenic 30.0%
! ATTAAAGGTACACTCTCTTT+AGG - Chr1:38648358-38648377 MsG0180002459.01.T01:intron 30.0%
! ATTCTTAAGAGGTTTTCTTC+TGG + Chr1:38647233-38647252 None:intergenic 30.0%
! ATTTTCCCAAATGCTAATCT+TGG + Chr1:38650036-38650055 None:intergenic 30.0%
! CTTTATCTAGTTTCTCTAGT+TGG + Chr1:38650869-38650888 MsG0180002461.01.T01:CDS 30.0%
! TAAGGGATTGATGAACTTTT+GGG - Chr1:38647427-38647446 MsG0180002459.01.T01:CDS 30.0%
! TATCTTGGTTTCTTTTGTCT+TGG - Chr1:38648951-38648970 MsG0180002459.01.T01:CDS 30.0%
! TTAAGGGATTGATGAACTTT+TGG - Chr1:38647426-38647445 MsG0180002459.01.T01:CDS 30.0%
! TTTTCCAAAAGAAGGGTAAA+AGG + Chr1:38650336-38650355 MsG0180002461.01.T01:intron 30.0%
! TTTTCCCAAATGCTAATCTT+GGG + Chr1:38650035-38650054 None:intergenic 30.0%
! TTTTGAACATGCATCTACAT+TGG - Chr1:38649697-38649716 MsG0180002459.01.T01:intron 30.0%
!! AAACCAAAAATGATGGATCT+TGG + Chr1:38649347-38649366 None:intergenic 30.0%
!! AAGAAGAAAAAGTGTTCTTC+TGG + Chr1:38649612-38649631 None:intergenic 30.0%
!! ATTGTTTCTGATGATTCTGT+AGG + Chr1:38649567-38649586 None:intergenic 30.0%
!! GAAAACTTTTGGAGACATAA+GGG - Chr1:38646935-38646954 MsG0180002459.01.T01:intron 30.0%
!! GCACATAATTTTTGCTTTTC+AGG + Chr1:38649644-38649663 None:intergenic 30.0%
!! GTCAAGCATTGATCAATTTA+AGG + Chr1:38647557-38647576 None:intergenic 30.0%
!! TGAAAACTTTTGGAGACATA+AGG - Chr1:38646934-38646953 MsG0180002459.01.T01:intron 30.0%
!! TTTACACAAAGGCTATTTCT+AGG + Chr1:38648798-38648817 None:intergenic 30.0%
!!! AAATTTTGAAACACCAACTC+AGG + Chr1:38649986-38650005 None:intergenic 30.0%
!!! ATTTGGTGTGTTTTAAGAGA+TGG - Chr1:38650237-38650256 MsG0180002459.01.T01:intron 30.0%
!!! GAAACAACCATTTTGAAACT+TGG + Chr1:38646048-38646067 None:intergenic 30.0%
!!! TTTTGAAGTTTGTGTAGATC+AGG - Chr1:38649167-38649186 MsG0180002459.01.T01:intron 30.0%
!!! TTTTTTGTCCAGTAGTCTAA+TGG - Chr1:38646414-38646433 MsG0180002459.01.T01:CDS 30.0%
AACAGAAATATCAAGCAGGA+AGG + Chr1:38649253-38649272 None:intergenic 35.0%
AAGTTCATCAATCCCTTAAG+AGG + Chr1:38647425-38647444 None:intergenic 35.0%
ACACATTATGTGTAGAGAAG+TGG - Chr1:38646447-38646466 MsG0180002459.01.T01:intron 35.0%
ACATCACTTGTGTAAGGTTA+AGG + Chr1:38647587-38647606 None:intergenic 35.0%
ACATTATGTGTAGAGAAGTG+GGG - Chr1:38646449-38646468 MsG0180002459.01.T01:intron 35.0%
ACTTGGATTCAACTATACTG+TGG + Chr1:38647640-38647659 None:intergenic 35.0%
AGAACAACCTAAGGATTTGA+TGG - Chr1:38648201-38648220 MsG0180002459.01.T01:intron 35.0%
AGATTCAGATACAGAGGATT+TGG - Chr1:38650992-38651011 MsG0180002459.01.T01:intron 35.0%
AGCAAAAATTATGTGCCAGT+TGG - Chr1:38649648-38649667 MsG0180002459.01.T01:intron 35.0%
AGGATAGTCATTCCTCTTAA+GGG - Chr1:38647410-38647429 MsG0180002459.01.T01:CDS 35.0%
AGGGAAAAATCAATCAATCG+AGG + Chr1:38646252-38646271 None:intergenic 35.0%
ATTAACACATTGCAGAGGTT+AGG + Chr1:38650474-38650493 MsG0180002461.01.T01:intron 35.0%
ATTCCCCAAGATTAGCATTT+GGG - Chr1:38650028-38650047 MsG0180002459.01.T01:intron 35.0%
CACATTATGTGTAGAGAAGT+GGG - Chr1:38646448-38646467 MsG0180002459.01.T01:intron 35.0%
CATCTATTGTAAGGCTTAAG+AGG + Chr1:38647464-38647483 None:intergenic 35.0%
CTCTTAAGCCTTACAATAGA+TGG - Chr1:38647462-38647481 MsG0180002459.01.T01:CDS 35.0%
CTGGTCAACTTTATCAAACT+TGG + Chr1:38651156-38651175 MsG0180002461.01.T01:intron 35.0%
GAAACATCAAACTTTGCAAG+TGG - Chr1:38649722-38649741 MsG0180002459.01.T01:intron 35.0%
GAATAGAAAAGGTGAAAAGG+GGG - Chr1:38646157-38646176 MsG0180002459.01.T01:CDS 35.0%
GATCATGACCATCTATTGTA+AGG + Chr1:38647473-38647492 None:intergenic 35.0%
GCATGTTCAAAATTACACCT+TGG + Chr1:38649689-38649708 None:intergenic 35.0%
GCGAAGCAATCTTTATTGTT+TGG + Chr1:38650418-38650437 MsG0180002461.01.T01:intron 35.0%
GGGAAAAATCAATCAATCGA+GGG + Chr1:38646251-38646270 None:intergenic 35.0%
GTAAAAGGAAGAAGATGCAA+AGG + Chr1:38650321-38650340 MsG0180002461.01.T01:intron 35.0%
TAAATTCCTCTTCTTCCAAC+TGG + Chr1:38649666-38649685 None:intergenic 35.0%
TAATGATAACAACGGTTGCT+CGG - Chr1:38650902-38650921 MsG0180002459.01.T01:intron 35.0%
TAATGCTGAACTTTCCCATA+AGG - Chr1:38647499-38647518 MsG0180002459.01.T01:CDS 35.0%
TAGAAGGAAGGTTCAATTGA+TGG + Chr1:38648111-38648130 None:intergenic 35.0%
TAGGATAGTCATTCCTCTTA+AGG - Chr1:38647409-38647428 MsG0180002459.01.T01:CDS 35.0%
TGCAACCTTGGATCTATATA+TGG - Chr1:38650507-38650526 MsG0180002459.01.T01:intron 35.0%
TGGTGTATTGTATGCAATCT+TGG + Chr1:38648828-38648847 None:intergenic 35.0%
TTAGATACAACTCTCACAGT+CGG - Chr1:38650175-38650194 MsG0180002459.01.T01:intron 35.0%
TTTCCCAAATGCTAATCTTG+GGG + Chr1:38650034-38650053 None:intergenic 35.0%
! AAACGAAGTACCTTCTTTCT+TGG + Chr1:38649913-38649932 None:intergenic 35.0%
! AACGAAGTACCTTCTTTCTT+GGG + Chr1:38649912-38649931 None:intergenic 35.0%
! AATTTTCCTGAGCAAAGTGA+TGG - Chr1:38651053-38651072 MsG0180002459.01.T01:intron 35.0%
! ACACCAAGATCCATCATTTT+TGG - Chr1:38649341-38649360 MsG0180002459.01.T01:intron 35.0%
! ACGAGTAAGTTTAGGATTTG+AGG - Chr1:38646183-38646202 MsG0180002459.01.T01:CDS 35.0%
! AGATACAGAGGATTTGGTAA+AGG - Chr1:38650998-38651017 MsG0180002459.01.T01:intron 35.0%
! ATTTAAGGTGACATTTAGGG+TGG + Chr1:38647542-38647561 None:intergenic 35.0%
! CACTCACTTTGTCACTTATT+TGG + Chr1:38650821-38650840 MsG0180002461.01.T01:CDS 35.0%
! CGAGTAAGTTTAGGATTTGA+GGG - Chr1:38646184-38646203 MsG0180002459.01.T01:CDS 35.0%
! CTCTCATTTTATTCAGGCAT+TGG - Chr1:38650666-38650685 MsG0180002459.01.T01:intron 35.0%
! GGGTTACTCTCATTTTATTC+AGG - Chr1:38650660-38650679 MsG0180002459.01.T01:intron 35.0%
! GTCTATACGAGTACTTGTTA+TGG + Chr1:38649231-38649250 None:intergenic 35.0%
! TACTAGGGATAATTTGTGCA+GGG + Chr1:38646497-38646516 None:intergenic 35.0%
! TCTTCCTTTTACCCTTCTTT+TGG - Chr1:38650329-38650348 MsG0180002459.01.T01:intron 35.0%
! TGGAGATACAGATGATTTTG+AGG - Chr1:38651073-38651092 MsG0180002459.01.T01:intron 35.0%
! TGGAGATTTGAAACACTACT+TGG + Chr1:38650849-38650868 MsG0180002461.01.T01:CDS 35.0%
! TTGGCCTGATTTTTACACAA+AGG + Chr1:38648809-38648828 None:intergenic 35.0%
! TTTAAGGTGACATTTAGGGT+GGG + Chr1:38647541-38647560 None:intergenic 35.0%
! TTTTTACTCTTAGGGTGTGT+TGG - Chr1:38648492-38648511 MsG0180002459.01.T01:intron 35.0%
!! AAGAAAGAAGGTACTTCGTT+TGG - Chr1:38649912-38649931 MsG0180002459.01.T01:intron 35.0%
AAAAACATGTGAGAGAGGGA+CGG - Chr1:38647151-38647170 MsG0180002459.01.T01:intron 40.0%
AAACAAAACGACGAGAGAAG+AGG + Chr1:38646272-38646291 None:intergenic 40.0%
AAATGCTAGTGTCTCAGTGT+GGG - Chr1:38648381-38648400 MsG0180002459.01.T01:intron 40.0%
AACAAAACGACGAGAGAAGA+GGG + Chr1:38646271-38646290 None:intergenic 40.0%
AACGACGAGGAGAAAATTGA+AGG - Chr1:38648237-38648256 MsG0180002459.01.T01:intron 40.0%
AAGTTGTTGTCACGTCTGAA+AGG - Chr1:38648758-38648777 MsG0180002459.01.T01:intron 40.0%
AATTAAGGCGTGCATTCACA+AGG - Chr1:38647612-38647631 MsG0180002459.01.T01:intron 40.0%
ACAAGCCAAGAACAACTAAC+CGG + Chr1:38649199-38649218 None:intergenic 40.0%
ACATCAAACTTTGCAAGTGG+TGG - Chr1:38649725-38649744 MsG0180002459.01.T01:intron 40.0%
ACCATTGTTTATCCTCTTGC+TGG + Chr1:38648925-38648944 None:intergenic 40.0%
ACGACGAGGAGAAAATTGAA+GGG - Chr1:38648238-38648257 MsG0180002459.01.T01:intron 40.0%
AGGGAAAAAGAGCTGTTGTA+AGG - Chr1:38648257-38648276 MsG0180002459.01.T01:intron 40.0%
ATCTAGACGAGACTAGACAA+CGG + Chr1:38647706-38647725 None:intergenic 40.0%
CATTCCCCAAGATTAGCATT+TGG - Chr1:38650027-38650046 MsG0180002459.01.T01:intron 40.0%
GAAAAAGAGCTGTTGTAAGG+TGG - Chr1:38648260-38648279 MsG0180002459.01.T01:intron 40.0%
GAAAGATATCTTCCAGCAAG+AGG - Chr1:38648910-38648929 MsG0180002459.01.T01:CDS 40.0%
GACATCACCATCAAATCCTT+AGG + Chr1:38648211-38648230 None:intergenic 40.0%
GGAAGAAGAGGAATTTACCA+AGG - Chr1:38649669-38649688 MsG0180002459.01.T01:intron 40.0%
GGAGGAGAAACCTCTTTATT+TGG - Chr1:38651019-38651038 MsG0180002459.01.T01:intron 40.0%
GGGTAAGTTACTGTGAATTG+AGG - Chr1:38646204-38646223 MsG0180002459.01.T01:CDS 40.0%
GTACTCTTAGAACACTTCGA+TGG - Chr1:38649083-38649102 MsG0180002459.01.T01:intron 40.0%
GTTTCAAAGGATGACAACAG+AGG - Chr1:38648317-38648336 MsG0180002459.01.T01:intron 40.0%
TAAGAAAGTGGTAGAGGAGT+AGG + Chr1:38647890-38647909 None:intergenic 40.0%
TAAGGTCGTAGAACAACCTA+AGG - Chr1:38648192-38648211 MsG0180002459.01.T01:intron 40.0%
TACAACCCATGGATACATGA+CGG + Chr1:38650083-38650102 None:intergenic 40.0%
TACCAACTGAGCTACACTTA+CGG - Chr1:38646519-38646538 MsG0180002459.01.T01:intron 40.0%
TATATGCAAGGTTTATGCCC+AGG - Chr1:38648081-38648100 MsG0180002459.01.T01:intron 40.0%
TCCAGCAAGAGGATAAACAA+TGG - Chr1:38648921-38648940 MsG0180002459.01.T01:CDS 40.0%
TGAGACAGATTCAGATACAG+AGG - Chr1:38650986-38651005 MsG0180002459.01.T01:intron 40.0%
TGATGTCAAAAGTAACGACG+AGG - Chr1:38648224-38648243 MsG0180002459.01.T01:intron 40.0%
TGTGTTTGGATGGAGGATTT+AGG + Chr1:38648721-38648740 None:intergenic 40.0%
TTGAGCAAGAATACAACCCA+TGG + Chr1:38650094-38650113 None:intergenic 40.0%
TTTGGATGGAGGATTTAGGA+GGG + Chr1:38648717-38648736 None:intergenic 40.0%
! ACTAGGGATAATTTGTGCAG+GGG + Chr1:38646496-38646515 None:intergenic 40.0%
! AGTTTAGAGTGGAGGCAAAT+AGG + Chr1:38650444-38650463 MsG0180002461.01.T01:intron 40.0%
! ATTTTCAGCAGAGGAGGTTA+AGG - Chr1:38649755-38649774 MsG0180002459.01.T01:intron 40.0%
! CAATAGACTAAGGGTGTGTT+TGG + Chr1:38648735-38648754 None:intergenic 40.0%
! CAGAATCGTTGTTGTTGTTG+TGG - Chr1:38645964-38645983 MsG0180002459.01.T01:CDS 40.0%
! CTACTAGGGATAATTTGTGC+AGG + Chr1:38646498-38646517 None:intergenic 40.0%
! GCAAGTGTCTGAAACTAGAA+AGG + Chr1:38648438-38648457 None:intergenic 40.0%
! TACAGAGGATTTGGTAAAGG+AGG - Chr1:38651001-38651020 MsG0180002459.01.T01:intron 40.0%
! TCTAGGATCGACCTTCAAAA+AGG + Chr1:38649016-38649035 None:intergenic 40.0%
! TGGAGACATAAGGGTATGTT+TGG - Chr1:38646944-38646963 MsG0180002459.01.T01:intron 40.0%
! TTGTTGTTGTTGTGGTCATG+AGG - Chr1:38645972-38645991 MsG0180002459.01.T01:CDS 40.0%
! TTTTCTCTCTTCTCAACGTC+AGG + Chr1:38647761-38647780 None:intergenic 40.0%
!! AATGATGGATCTTGGTGTGA+TGG + Chr1:38649339-38649358 None:intergenic 40.0%
!! GATTTGGAGTTTTCCTGAGT+TGG - Chr1:38649970-38649989 MsG0180002459.01.T01:intron 40.0%
!! GGATTGATGAACTTTTGGGT+TGG - Chr1:38647431-38647450 MsG0180002459.01.T01:CDS 40.0%
AAGTAACACAGAAGCAGCTG+AGG - Chr1:38650791-38650810 MsG0180002459.01.T01:intron 45.0%
ACATTGCAGAGGTTAGGCAA+GGG + Chr1:38650468-38650487 MsG0180002461.01.T01:intron 45.0%
ACCAACTGAGCTACACTTAC+GGG - Chr1:38646520-38646539 MsG0180002459.01.T01:intron 45.0%
ACTAAAGCTCCTGCATATGC+AGG + Chr1:38648874-38648893 None:intergenic 45.0%
AGTAACACAGAAGCAGCTGA+GGG - Chr1:38650792-38650811 MsG0180002459.01.T01:intron 45.0%
AGTCACTCTCCCAAGAAAGA+AGG - Chr1:38649900-38649919 MsG0180002459.01.T01:intron 45.0%
AGTGCTTGGCATTCATGAAG+AGG - Chr1:38649815-38649834 MsG0180002459.01.T01:intron 45.0%
AGTTCTCACTGTCTCTCCTT+GGG - Chr1:38650640-38650659 MsG0180002459.01.T01:intron 45.0%
ATGCAGCACGTAGGAAAATC+TGG + Chr1:38651175-38651194 MsG0180002461.01.T01:intron 45.0%
CAAATGGTGAGACCTCTTCT+CGG - Chr1:38648846-38648865 MsG0180002459.01.T01:intron 45.0%
CCTACTCGTGTAGAAGTAGA+AGG + Chr1:38648127-38648146 None:intergenic 45.0%
CCTTCTACTTCTACACGAGT+AGG - Chr1:38648124-38648143 MsG0180002459.01.T01:intron 45.0%
CGTGGAGACATTATCTCTGT+TGG + Chr1:38649880-38649899 None:intergenic 45.0%
CTAAAGCTCCTGCATATGCA+GGG + Chr1:38648873-38648892 None:intergenic 45.0%
CTCGTGTAGAAGTAGAAGGA+AGG + Chr1:38648123-38648142 None:intergenic 45.0%
CTTAGGGTGTGTTGGATTGA+GGG - Chr1:38648500-38648519 MsG0180002459.01.T01:intron 45.0%
GAAATGCTAGTGTCTCAGTG+TGG - Chr1:38648380-38648399 MsG0180002459.01.T01:intron 45.0%
GAATATATCTCCTCACAGCG+CGG + Chr1:38650717-38650736 MsG0180002461.01.T01:intron 45.0%
GAATCCAGCCATTAGACTAC+TGG + Chr1:38646425-38646444 None:intergenic 45.0%
GACGCGTTTGATGCATCAAA+CGG - Chr1:38647677-38647696 MsG0180002459.01.T01:intron 45.0%
GCGAAGTAAGAAAGTGGTAG+AGG + Chr1:38647896-38647915 None:intergenic 45.0%
GCGTCAATATCTCAGGATCA+TGG + Chr1:38649590-38649609 None:intergenic 45.0%
GGAGACATTATCTCTGTTGG+TGG + Chr1:38649877-38649896 None:intergenic 45.0%
GGCACATATGGACTCTGATT+TGG - Chr1:38650932-38650951 MsG0180002459.01.T01:intron 45.0%
GTATCTCCATCACTTTGCTC+AGG + Chr1:38651062-38651081 MsG0180002461.01.T01:intron 45.0%
GTGTGTTGGATTGAGGGTTT+AGG - Chr1:38648506-38648525 MsG0180002459.01.T01:intron 45.0%
GTTGGATTGAGGGTTTAGGA+GGG - Chr1:38648510-38648529 MsG0180002459.01.T01:intron 45.0%
GTTTGGATGGAGGATTTAGG+AGG + Chr1:38648718-38648737 None:intergenic 45.0%
TAGAGTGGAGGCAAATAGGA+AGG + Chr1:38650440-38650459 MsG0180002461.01.T01:intron 45.0%
TAGGCAAGGGAAGTTTAGAG+TGG + Chr1:38650455-38650474 MsG0180002461.01.T01:intron 45.0%
TAGTTCTCACTGTCTCTCCT+TGG - Chr1:38650639-38650658 MsG0180002459.01.T01:intron 45.0%
TATGTGCCAGTTGGAAGAAG+AGG - Chr1:38649657-38649676 MsG0180002459.01.T01:intron 45.0%
TCTTAGGGTGTGTTGGATTG+AGG - Chr1:38648499-38648518 MsG0180002459.01.T01:intron 45.0%
TCTTCTGGCGTCAATATCTC+AGG + Chr1:38649597-38649616 None:intergenic 45.0%
TGACGAGAGAGAGAGAGAAA+TGG - Chr1:38647816-38647835 MsG0180002459.01.T01:intron 45.0%
TGTTGGATTGAGGGTTTAGG+AGG - Chr1:38648509-38648528 MsG0180002459.01.T01:intron 45.0%
TTCTTACTTCGCCGCAAACA+AGG - Chr1:38647904-38647923 MsG0180002459.01.T01:intron 45.0%
TTGGATGGAGGATTTAGGAG+GGG + Chr1:38648716-38648735 None:intergenic 45.0%
TTGGATTGAGGGTTTAGGAG+GGG - Chr1:38648511-38648530 MsG0180002459.01.T01:intron 45.0%
TTGTCCAGTAGTCTAATGGC+TGG - Chr1:38646418-38646437 MsG0180002459.01.T01:intron 45.0%
TTTCGCCGTCATGTATCCAT+GGG - Chr1:38650075-38650094 MsG0180002459.01.T01:intron 45.0%
TTTGCGGCGAAGTAAGAAAG+TGG + Chr1:38647902-38647921 None:intergenic 45.0%
! AGACTAAGGGTGTGTTTGGA+TGG + Chr1:38648731-38648750 None:intergenic 45.0%
! GAAGACATTTTCAGCAGAGG+AGG - Chr1:38649749-38649768 MsG0180002459.01.T01:intron 45.0%
! GGTGAAGACATTTTCAGCAG+AGG - Chr1:38649746-38649765 MsG0180002459.01.T01:intron 45.0%
! TTGACTGGAGGTATAGTGCT+TGG - Chr1:38649801-38649820 MsG0180002459.01.T01:intron 45.0%
! TTGTTGTTGTGGTCATGAGG+CGG - Chr1:38645975-38645994 MsG0180002459.01.T01:CDS 45.0%
! TTTTCGCCGTCATGTATCCA+TGG - Chr1:38650074-38650093 MsG0180002459.01.T01:intron 45.0%
!! AGCTCAGTTGGTAGCTACTA+GGG + Chr1:38646512-38646531 None:intergenic 45.0%
!! GTTCAATTGATGGCGTTCCT+GGG + Chr1:38648101-38648120 None:intergenic 45.0%
!! TAGCTCAGTTGGTAGCTACT+AGG + Chr1:38646513-38646532 None:intergenic 45.0%
ACTGAGCTGGCAAGATTGAC+TGG - Chr1:38649786-38649805 MsG0180002459.01.T01:intron 50.0%
AGAGAGAGAGAGAAATGGCG+TGG - Chr1:38647821-38647840 MsG0180002459.01.T01:intron 50.0%
AGTCAATCTTGCCAGCTCAG+TGG + Chr1:38649787-38649806 None:intergenic 50.0%
ATGGAGGATTTAGGAGGGGA+AGG + Chr1:38648712-38648731 None:intergenic 50.0%
ATTGAGGGTTTAGGAGGGGA+GGG - Chr1:38648515-38648534 MsG0180002459.01.T01:intron 50.0%
CACATTGCAGAGGTTAGGCA+AGG + Chr1:38650469-38650488 MsG0180002461.01.T01:intron 50.0%
CGAGAAGAGGTCTCACCATT+TGG + Chr1:38648848-38648867 None:intergenic 50.0%
GTAGAGAAGTGGGGAATTCG+AGG - Chr1:38646458-38646477 MsG0180002459.01.T01:intron 50.0%
TAAGGAGATTGCCACTGAGC+TGG - Chr1:38649773-38649792 MsG0180002459.01.T01:intron 50.0%
TCCCGTAAGTGTAGCTCAGT+TGG + Chr1:38646524-38646543 None:intergenic 50.0%
TCGAGCTCTTGCTCGAGTTT+GGG + Chr1:38650739-38650758 MsG0180002461.01.T01:intron 50.0%
TGATAACAACGGTTGCTCGG+AGG - Chr1:38650905-38650924 MsG0180002459.01.T01:intron 50.0%
TGGAGGATTTAGGAGGGGAA+GGG + Chr1:38648711-38648730 None:intergenic 50.0%
TGTGTAGATCAGGTTAGCGC+CGG - Chr1:38649177-38649196 MsG0180002459.01.T01:intron 50.0%
TTCGAGCTCTTGCTCGAGTT+TGG + Chr1:38650740-38650759 MsG0180002461.01.T01:intron 50.0%
TTTCTTGGGAGAGTGACTCG+TGG + Chr1:38649898-38649917 None:intergenic 50.0%
! CTAAGGGTGTGTTTGGATGG+AGG + Chr1:38648728-38648747 None:intergenic 50.0%
! GATAATTTGTGCAGGGGCTG+GGG + Chr1:38646490-38646509 None:intergenic 50.0%
! GCAAGGGAAGTTTAGAGTGG+AGG + Chr1:38650452-38650471 MsG0180002461.01.T01:intron 50.0%
! GGATAATTTGTGCAGGGGCT+GGG + Chr1:38646491-38646510 None:intergenic 50.0%
! GGGGGCATACGAGTAAGTTT+AGG - Chr1:38646175-38646194 MsG0180002459.01.T01:CDS 50.0%
! GGTGACATTTAGGGTGGGTA+AGG + Chr1:38647536-38647555 None:intergenic 50.0%
!! GGTTCAATTGATGGCGTTCC+TGG + Chr1:38648102-38648121 None:intergenic 50.0%
!! TAGCGCCGGTTAGTTGTTCT+TGG - Chr1:38649191-38649210 MsG0180002459.01.T01:intron 50.0%
AGGATTTAGGAGGGGAAGGG+AGG + Chr1:38648708-38648727 None:intergenic 55.0%
CATATGCAGGGTCCGAGAAG+AGG + Chr1:38648861-38648880 None:intergenic 55.0%
CTCGGAGGATGAGGCACATA+TGG - Chr1:38650920-38650939 MsG0180002459.01.T01:intron 55.0%
GAGAGAGAGAAATGGCGTGG+AGG - Chr1:38647824-38647843 MsG0180002459.01.T01:intron 55.0%
GAGCTGGCAAGATTGACTGG+AGG - Chr1:38649789-38649808 MsG0180002459.01.T01:intron 55.0%
GATTGAGGGTTTAGGAGGGG+AGG - Chr1:38648514-38648533 MsG0180002459.01.T01:intron 55.0%
GATTTAGGAGGGGAAGGGAG+GGG + Chr1:38648706-38648725 None:intergenic 55.0%
GGATTTAGGAGGGGAAGGGA+GGG + Chr1:38648707-38648726 None:intergenic 55.0%
TATATCTCCTCACAGCGCGG+AGG + Chr1:38650714-38650733 MsG0180002461.01.T01:intron 55.0%
TTCTCGGACCCTGCATATGC+AGG - Chr1:38648862-38648881 MsG0180002459.01.T01:intron 55.0%
TTGTTGTGGTCATGAGGCGG+AGG - Chr1:38645978-38645997 MsG0180002459.01.T01:CDS 55.0%
! GGGATAATTTGTGCAGGGGC+TGG + Chr1:38646492-38646511 None:intergenic 55.0%
AGGGTTTAGGAGGGGAGGGA+GGG - Chr1:38648519-38648538 MsG0180002459.01.T01:intron 60.0%
CAACGGTTGCTCGGAGGATG+AGG - Chr1:38650911-38650930 MsG0180002459.01.T01:intron 60.0%
CTCTCTCTCGTCACGCCCCA+CGG + Chr1:38647809-38647828 None:intergenic 65.0%
GAGGGTTTAGGAGGGGAGGG+AGG - Chr1:38648518-38648537 MsG0180002459.01.T01:intron 65.0%
GGGTTTAGGAGGGGAGGGAG+GGG - Chr1:38648520-38648539 MsG0180002459.01.T01:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG + Chr1:38648702-38648721 None:intergenic 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG + Chr1:38648703-38648722 None:intergenic 65.0%
TTAGGAGGGGAGGGAGGGGA+GGG - Chr1:38648524-38648543 MsG0180002459.01.T01:intron 65.0%
TTTAGGAGGGGAGGGAGGGG+AGG - Chr1:38648523-38648542 MsG0180002459.01.T01:intron 65.0%
AGTCTCTGCCTCCACCGCCG+TGG - Chr1:38647789-38647808 MsG0180002459.01.T01:intron 70.0%
GTCTCTGCCTCCACCGCCGT+GGG - Chr1:38647790-38647809 MsG0180002459.01.T01:intron 70.0%
TCTCTCGTCACGCCCCACGG+CGG + Chr1:38647806-38647825 None:intergenic 70.0%
TCTCTGCCTCCACCGCCGTG+GGG - Chr1:38647791-38647810 MsG0180002459.01.T01:intron 70.0%
GGGATGGCCTCCGCGCTGTG+AGG - Chr1:38650704-38650723 MsG0180002459.01.T01:intron 75.0%
! CTCGTCACGCCCCACGGCGG+TGG + Chr1:38647803-38647822 None:intergenic 80.0%
! GTCACGCCCCACGGCGGTGG+AGG + Chr1:38647800-38647819 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 38645937 38651202 38645937 ID=MsG0180002459.01;Name=MsG0180002459.01
Chr1 mRNA 38645937 38651202 38645937 ID=MsG0180002459.01.T01;Parent=MsG0180002459.01;Name=MsG0180002459.01.T01;_AED=0.46;_eAED=0.49;_QI=0|0|0|0.75|1|1|4|0|356
Chr1 exon 38651134 38651202 38651134 ID=MsG0180002459.01.T01:exon:12685;Parent=MsG0180002459.01.T01
Chr1 exon 38648866 38649036 38648866 ID=MsG0180002459.01.T01:exon:12686;Parent=MsG0180002459.01.T01
Chr1 exon 38647291 38647623 38647291 ID=MsG0180002459.01.T01:exon:12687;Parent=MsG0180002459.01.T01
Chr1 exon 38645937 38646434 38645937 ID=MsG0180002459.01.T01:exon:12688;Parent=MsG0180002459.01.T01
Chr1 CDS 38651134 38651202 38651134 ID=MsG0180002459.01.T01:cds;Parent=MsG0180002459.01.T01
Chr1 CDS 38648866 38649036 38648866 ID=MsG0180002459.01.T01:cds;Parent=MsG0180002459.01.T01
Chr1 CDS 38647291 38647623 38647291 ID=MsG0180002459.01.T01:cds;Parent=MsG0180002459.01.T01
Chr1 CDS 38645937 38646434 38645937 ID=MsG0180002459.01.T01:cds;Parent=MsG0180002459.01.T01
Gene Sequence

>MsG0180002459.01.T01

ATGCAGGAGCAGCAGCAGCAGCATCAGCAGAATCGTTGTTGTTGTTGTGGTCATGAGGCGGAGGAGACTGAACGCCATCAATTGAACCTTCCTTCTACTTCTACACGAGTAGGATGCCTAAGTTTTCATTCAACTCCATTTTCGAAGTATAATCATGATAAGGTCGTAGAACAACCTAAGGATTTGATGGTGATGTCAAAAGTAACGACGAGGAGAAAATTGAAGGGAAAAAGAGCTGTTGCTCGGAAAAAAGAAGAGAGACTTCGCGAAGCTCTGAAGAAGATTGAGCCTACAGAATCATCAGAAACAATCCATGATCCTGAGATATTGACGCCAGAAGAACACTTTTTCTTCTTAAAAATGGGCCTGAAAAGCAAAAATTATGTGCCAGTTGGAAGAAGAGGAATTTACCAAGGTGTAATTTTGAACATGCATCTACATTGGAAGAAACATCAAACTTTGCAAGTGGTGGTGAAGACATTTTCAGCAGAGGAGGTTAAGGAGATTGCCACTGAGCTGGCAAGATTGACTGGAGGTATAGTGCTTGGCATTCATGAAGAGGACAATAATAATGGATGGCCTCCGCGCTGTGAGGAGATATATTCCCAAACTCGAGCAAGAGCTCGAAATCTTCGAGCACAACTTCAAAGCACAGCTGAAAGTAACACAGAAGCAGCTGAGGGAATCCAAATAAGTGACAAAGTGAGTGTTGAACCAAGTAGTGTTTCAAATCTCCAACTAGAGAAACTAGATAAAGTTGGTGCAATGTTTAATGATAACAACGGTTGCTCGGAGGATGAGGCACATATGGACTCTGATTTGGATTCATATTCTGATAAATTATCAGACATCTTTGAGACAGATTCAGATACAGAGGATTTGGTAAAGGAGGAGAAACCTCTTTATTTGGACGAATTTAATAATTTTCCTGAGCAAAGTGATGGAGATACAGATGATTTTGAGGAGCATCTGCAACAGATATCATACAACTCTAAAAACATGGAAAAAGATGCTGACTTGCCCAAGTTTGATAAAGTTGACCAGATTTTCCTACGTGCTGCATCATTTTAA

Protein sequence

>MsG0180002459.01.T01

MQEQQQQHQQNRCCCCGHEAEETERHQLNLPSTSTRVGCLSFHSTPFSKYNHDKVVEQPKDLMVMSKVTTRRKLKGKRAVARKKEERLREALKKIEPTESSETIHDPEILTPEEHFFFLKMGLKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVVKTFSAEEVKEIATELARLTGGIVLGIHEEDNNNGWPPRCEEIYSQTRARARNLRAQLQSTAESNTEAAEGIQISDKVSVEPSSVSNLQLEKLDKVGAMFNDNNGCSEDEAHMDSDLDSYSDKLSDIFETDSDTEDLVKEEKPLYLDEFNNFPEQSDGDTDDFEEHLQQISYNSKNMEKDADLPKFDKVDQIFLRAASF*