Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380017238.01.T01 | XP_013461811.1 | 93.6 | 375 | 20 | 1 | 1 | 375 | 1 | 371 | 0 | 647 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380017238.01.T01 | Q9C652 | 53.922 | 204 | 83 | 4 | 5 | 201 | 1 | 200 | 2.69E-64 | 211 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380017238.01.T01 | A0A072V2H9 | 93.600 | 375 | 20 | 1 | 1 | 375 | 1 | 371 | 0.0 | 647 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180000209.01 | MsG0380017238.01 | 0.843365 | 1.465394e-58 | 2.287635e-55 |
MsG0180000210.01 | MsG0380017238.01 | 0.818110 | 2.325026e-52 | 1.724679e-49 |
MsG0180000503.01 | MsG0380017238.01 | 0.808644 | 2.798238e-50 | 1.608530e-47 |
MsG0180000777.01 | MsG0380017238.01 | 0.829359 | 5.381013e-55 | 5.495143e-52 |
MsG0180001141.01 | MsG0380017238.01 | 0.847598 | 1.045249e-59 | 1.867353e-56 |
MsG0180001886.01 | MsG0380017238.01 | 0.831917 | 1.272197e-55 | 1.400434e-52 |
MsG0180002547.01 | MsG0380017238.01 | 0.806784 | 6.951889e-50 | 3.806867e-47 |
MsG0180003854.01 | MsG0380017238.01 | 0.802472 | 5.520353e-49 | 2.706495e-46 |
MsG0180003952.01 | MsG0380017238.01 | 0.801419 | 9.085422e-49 | 4.336734e-46 |
MsG0180004389.01 | MsG0380017238.01 | 0.818632 | 1.771762e-52 | 1.333284e-49 |
MsG0180004465.01 | MsG0380017238.01 | 0.810296 | 1.237197e-50 | 7.429355e-48 |
MsG0180004509.01 | MsG0380017238.01 | 0.806598 | 7.611461e-50 | 4.148096e-47 |
MsG0180004765.01 | MsG0380017238.01 | 0.820244 | 7.597334e-53 | 5.979153e-50 |
MsG0180005050.01 | MsG0380017238.01 | 0.801756 | 7.746993e-49 | 3.729406e-46 |
MsG0180005250.01 | MsG0380017238.01 | 0.801828 | 7.490669e-49 | 3.612771e-46 |
MsG0180005990.01 | MsG0380017238.01 | 0.810847 | 9.404284e-51 | 5.731143e-48 |
MsG0180005993.01 | MsG0380017238.01 | 0.849434 | 3.240989e-60 | 6.143199e-57 |
MsG0280006405.01 | MsG0380017238.01 | 0.809424 | 1.905050e-50 | 1.118131e-47 |
MsG0280006422.01 | MsG0380017238.01 | 0.814580 | 1.432944e-51 | 9.651942e-49 |
MsG0280010722.01 | MsG0380017238.01 | 0.826975 | 2.019954e-54 | 1.923879e-51 |
MsG0280010778.01 | MsG0380017238.01 | 0.825171 | 5.421288e-54 | 4.904317e-51 |
MsG0280010980.01 | MsG0380017238.01 | 0.811403 | 7.125878e-51 | 4.406992e-48 |
MsG0280011109.01 | MsG0380017238.01 | 0.822400 | 2.417184e-53 | 2.021150e-50 |
MsG0380011609.01 | MsG0380017238.01 | 0.815009 | 1.151154e-51 | 7.844356e-49 |
MsG0380012460.01 | MsG0380017238.01 | 0.815458 | 9.149977e-52 | 6.312189e-49 |
MsG0380013178.01 | MsG0380017238.01 | 0.809214 | 2.113835e-50 | 1.233719e-47 |
MsG0380014173.01 | MsG0380017238.01 | 0.847643 | 1.015658e-59 | 1.817161e-56 |
MsG0380014248.01 | MsG0380017238.01 | 0.807599 | 4.672057e-50 | 2.613013e-47 |
MsG0380014277.01 | MsG0380017238.01 | 0.805096 | 1.574135e-49 | 8.255113e-47 |
MsG0380014296.01 | MsG0380017238.01 | 0.802829 | 4.658119e-49 | 2.304827e-46 |
MsG0380014537.01 | MsG0380017238.01 | 0.801799 | 7.593123e-49 | 3.659438e-46 |
MsG0380014647.01 | MsG0380017238.01 | 0.803303 | 3.718423e-49 | 1.862039e-46 |
MsG0380015164.01 | MsG0380017238.01 | 0.834225 | 3.389242e-56 | 3.996225e-53 |
MsG0380015440.01 | MsG0380017238.01 | 0.837851 | 4.071985e-57 | 5.357552e-54 |
MsG0380015555.01 | MsG0380017238.01 | 0.831004 | 2.134561e-55 | 2.286761e-52 |
MsG0380015778.01 | MsG0380017238.01 | 0.803968 | 2.705893e-49 | 1.378454e-46 |
MsG0380016067.01 | MsG0380017238.01 | 0.809702 | 1.660269e-50 | 9.816739e-48 |
MsG0380016133.01 | MsG0380017238.01 | 0.816060 | 6.717670e-52 | 4.711223e-49 |
MsG0380016970.01 | MsG0380017238.01 | 0.815539 | 8.779709e-52 | 6.069983e-49 |
MsG0380017238.01 | MsG0380017543.01 | 0.812458 | 4.196972e-51 | 2.670062e-48 |
MsG0380017238.01 | MsG0380017680.01 | 0.804173 | 2.452508e-49 | 1.255940e-46 |
MsG0380017238.01 | MsG0480018163.01 | 0.828283 | 9.797785e-55 | 9.694379e-52 |
MsG0380017238.01 | MsG0480019416.01 | 0.801482 | 8.819472e-49 | 4.216565e-46 |
MsG0380017238.01 | MsG0480020447.01 | 0.813251 | 2.813129e-51 | 1.827675e-48 |
MsG0380017238.01 | MsG0480021215.01 | 0.804581 | 2.017028e-49 | 1.043819e-46 |
MsG0380017238.01 | MsG0480021451.01 | 0.805163 | 1.523904e-49 | 8.005563e-47 |
MsG0380017238.01 | MsG0480021452.01 | 0.820706 | 5.953405e-53 | 4.745598e-50 |
MsG0380017238.01 | MsG0480021465.01 | 0.808439 | 3.095371e-50 | 1.769977e-47 |
MsG0380017238.01 | MsG0480021558.01 | 0.805814 | 1.112993e-49 | 5.945635e-47 |
MsG0380017238.01 | MsG0480021750.01 | 0.849746 | 2.653848e-60 | 5.081566e-57 |
MsG0380017238.01 | MsG0480021994.01 | 0.808421 | 3.122300e-50 | 1.784514e-47 |
MsG0380017238.01 | MsG0480022164.01 | 0.840776 | 7.093619e-58 | 1.021095e-54 |
MsG0380017238.01 | MsG0480022222.01 | 0.829986 | 3.786855e-55 | 3.938072e-52 |
MsG0380017238.01 | MsG0480022696.01 | 0.818346 | 2.056492e-52 | 1.535553e-49 |
MsG0380017238.01 | MsG0480022711.01 | 0.824612 | 7.345254e-54 | 6.539783e-51 |
MsG0380017238.01 | MsG0480022750.01 | 0.804187 | 2.436279e-49 | 1.248055e-46 |
MsG0380017238.01 | MsG0480022795.01 | 0.820103 | 8.185652e-53 | 6.417832e-50 |
MsG0380017238.01 | MsG0480022985.01 | 0.829437 | 5.150967e-55 | 5.271629e-52 |
MsG0380017238.01 | MsG0480023943.01 | 0.841223 | 5.412726e-58 | 7.899553e-55 |
MsG0380017238.01 | MsG0480023994.01 | 0.816940 | 4.266595e-52 | 3.065318e-49 |
MsG0380017238.01 | MsG0580024197.01 | 0.829754 | 4.312328e-55 | 4.454979e-52 |
MsG0380017238.01 | MsG0580024390.01 | 0.805011 | 1.640105e-49 | 8.582302e-47 |
MsG0380017238.01 | MsG0580024495.01 | 0.804406 | 2.193238e-49 | 1.129871e-46 |
MsG0380017238.01 | MsG0580025135.01 | 0.805034 | 1.621888e-49 | 8.491982e-47 |
MsG0380017238.01 | MsG0580025448.01 | 0.808283 | 3.341310e-50 | 1.902802e-47 |
MsG0380017238.01 | MsG0580025587.01 | 0.808825 | 2.559796e-50 | 1.478496e-47 |
MsG0380017238.01 | MsG0580026086.01 | 0.822588 | 2.186533e-53 | 1.838124e-50 |
MsG0380017238.01 | MsG0580026137.01 | 0.809491 | 1.843362e-50 | 1.083802e-47 |
MsG0380017238.01 | MsG0580026340.01 | 0.803713 | 3.056929e-49 | 1.547026e-46 |
MsG0380017238.01 | MsG0680030320.01 | 0.848867 | 4.662195e-60 | 8.676279e-57 |
MsG0380017238.01 | MsG0680030413.01 | 0.858516 | 7.806456e-63 | 1.997577e-59 |
MsG0380017238.01 | MsG0680030415.01 | 0.810710 | 1.006801e-50 | 6.113255e-48 |
MsG0380017238.01 | MsG0680030882.01 | 0.806835 | 6.780802e-50 | 3.718233e-47 |
MsG0380017238.01 | MsG0680031468.01 | 0.812177 | 4.834942e-51 | 3.052560e-48 |
MsG0380017238.01 | MsG0680031646.01 | 0.821006 | 5.079585e-53 | 4.083618e-50 |
MsG0380017238.01 | MsG0680034230.01 | 0.806206 | 9.205441e-50 | 4.967303e-47 |
MsG0380017238.01 | MsG0780036146.01 | 0.828184 | 1.035410e-54 | 1.021577e-51 |
MsG0380017238.01 | MsG0780039144.01 | 0.870076 | 1.917842e-66 | 7.363572e-63 |
MsG0380017238.01 | MsG0780040445.01 | 0.800585 | 1.345049e-48 | 6.286326e-46 |
MsG0380017238.01 | MsG0780040545.01 | 0.822783 | 1.969137e-53 | 1.664457e-50 |
MsG0380017238.01 | MsG0780040888.01 | 0.809585 | 1.759332e-50 | 1.037055e-47 |
MsG0380017238.01 | MsG0880042518.01 | 0.831310 | 1.795210e-55 | 1.940655e-52 |
MsG0380017238.01 | MsG0880043454.01 | 0.838405 | 2.931957e-57 | 3.923100e-54 |
MsG0380017238.01 | MsG0880044728.01 | 0.826014 | 3.423023e-54 | 3.171724e-51 |
MsG0380017238.01 | MsG0880045111.01 | 0.829905 | 3.961870e-55 | 4.110838e-52 |
MsG0380017238.01 | MsG0880045145.01 | 0.808596 | 2.865632e-50 | 1.645231e-47 |
MsG0380017238.01 | MsG0880045362.01 | 0.825950 | 3.543671e-54 | 3.277667e-51 |
MsG0380017238.01 | MsG0880045535.01 | 0.838577 | 2.648239e-57 | 3.562134e-54 |
MsG0380017238.01 | MsG0880045555.01 | -0.803563 | 3.283457e-49 | 1.655439e-46 |
MsG0380017238.01 | MsG0880045613.01 | 0.803275 | 3.767639e-49 | 1.885395e-46 |
MsG0380017238.01 | MsG0880045736.01 | 0.840601 | 7.883698e-58 | 1.128593e-54 |
MsG0380017238.01 | MsG0880045937.01 | 0.849958 | 2.314048e-60 | 4.462365e-57 |
MsG0380017238.01 | MsG0880046458.01 | 0.833646 | 4.732417e-56 | 5.483860e-53 |
MsG0380017238.01 | MsG0880046631.01 | 0.809251 | 2.075077e-50 | 1.212323e-47 |
MsG0380017238.01 | MsG0880047052.01 | 0.815326 | 9.792313e-52 | 6.730446e-49 |
MsG0380017238.01 | MsG0880047427.01 | 0.812262 | 4.632721e-51 | 2.931751e-48 |
MsG0380017238.01 | MsG0880047473.01 | 0.805192 | 1.503315e-49 | 7.903075e-47 |
MsG0380017238.01 | MsG0880047764.01 | 0.823975 | 1.036917e-53 | 9.064838e-51 |
MsG0280006593.01 | MsG0380017238.01 | 0.832468 | 9.290898e-56 | 1.039370e-52 |
MsG0280006678.01 | MsG0380017238.01 | 0.808279 | 3.348300e-50 | 1.906596e-47 |
MsG0280007088.01 | MsG0380017238.01 | 0.815519 | 8.870864e-52 | 6.129757e-49 |
MsG0280007727.01 | MsG0380017238.01 | 0.815661 | 8.246567e-52 | 5.720569e-49 |
MsG0280007955.01 | MsG0380017238.01 | 0.825516 | 4.493019e-54 | 4.104279e-51 |
MsG0280009395.01 | MsG0380017238.01 | -0.829468 | 5.061135e-55 | 5.184414e-52 |
MsG0280010233.01 | MsG0380017238.01 | 0.839646 | 1.399122e-57 | 1.944451e-54 |
MsG0280010434.01 | MsG0380017238.01 | 0.855754 | 5.100850e-62 | 1.190176e-58 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380017238.01.T01 | MTR_3g103420 | 93.600 | 375 | 20 | 1 | 1 | 375 | 1 | 371 | 0.0 | 647 |
MsG0380017238.01.T01 | MTR_1g073690 | 53.769 | 199 | 85 | 3 | 5 | 202 | 1 | 193 | 6.21e-61 | 203 |
MsG0380017238.01.T01 | MTR_3g055990 | 53.061 | 196 | 81 | 3 | 5 | 200 | 1 | 185 | 8.33e-59 | 198 |
MsG0380017238.01.T01 | MTR_3g055990 | 53.061 | 196 | 81 | 3 | 5 | 200 | 1 | 185 | 9.28e-59 | 198 |
MsG0380017238.01.T01 | MTR_2g026180 | 52.332 | 193 | 83 | 3 | 8 | 200 | 2 | 185 | 3.12e-57 | 194 |
MsG0380017238.01.T01 | MTR_5g097580 | 51.020 | 196 | 85 | 3 | 5 | 200 | 1 | 185 | 4.27e-56 | 191 |
MsG0380017238.01.T01 | MTR_5g097580 | 51.020 | 196 | 85 | 3 | 5 | 200 | 1 | 185 | 5.66e-56 | 191 |
MsG0380017238.01.T01 | MTR_6g004810 | 39.175 | 194 | 94 | 3 | 11 | 203 | 46 | 216 | 2.72e-42 | 152 |
MsG0380017238.01.T01 | MTR_3g082650 | 35.079 | 191 | 100 | 4 | 11 | 200 | 19 | 186 | 1.06e-34 | 131 |
MsG0380017238.01.T01 | MTR_2g026180 | 54.622 | 119 | 49 | 2 | 82 | 200 | 2 | 115 | 1.00e-33 | 129 |
MsG0380017238.01.T01 | MTR_2g026180 | 35.366 | 82 | 48 | 2 | 11 | 91 | 37 | 114 | 9.25e-11 | 63.2 |
MsG0380017238.01.T01 | MTR_5g017280 | 31.500 | 200 | 113 | 3 | 8 | 207 | 2 | 177 | 1.86e-25 | 106 |
MsG0380017238.01.T01 | MTR_5g017280 | 30.275 | 218 | 113 | 4 | 11 | 198 | 93 | 301 | 1.75e-23 | 100 |
MsG0380017238.01.T01 | MTR_5g017280 | 31.500 | 200 | 113 | 3 | 8 | 207 | 2 | 177 | 2.98e-25 | 105 |
MsG0380017238.01.T01 | MTR_5g017280 | 30.275 | 218 | 113 | 4 | 11 | 198 | 93 | 301 | 2.97e-23 | 100 |
MsG0380017238.01.T01 | MTR_4g088010 | 28.044 | 271 | 144 | 10 | 6 | 267 | 72 | 300 | 5.38e-19 | 87.8 |
MsG0380017238.01.T01 | MTR_3g084040 | 36.047 | 86 | 55 | 0 | 116 | 201 | 31 | 116 | 2.90e-13 | 67.0 |
MsG0380017238.01.T01 | MTR_8g463890 | 24.479 | 192 | 126 | 4 | 6 | 197 | 69 | 241 | 5.59e-13 | 70.5 |
MsG0380017238.01.T01 | MTR_7g117495 | 41.667 | 84 | 44 | 2 | 6 | 88 | 14 | 93 | 6.80e-13 | 68.6 |
MsG0380017238.01.T01 | MTR_7g117495 | 41.667 | 84 | 44 | 2 | 6 | 88 | 14 | 93 | 8.37e-13 | 68.2 |
MsG0380017238.01.T01 | MTR_3g092490 | 42.857 | 84 | 43 | 2 | 6 | 88 | 22 | 101 | 2.91e-12 | 65.1 |
MsG0380017238.01.T01 | MTR_7g107580 | 23.684 | 266 | 159 | 7 | 6 | 270 | 12 | 234 | 3.96e-12 | 67.8 |
MsG0380017238.01.T01 | MTR_3g092490 | 42.857 | 84 | 43 | 2 | 6 | 88 | 22 | 101 | 5.05e-12 | 65.9 |
MsG0380017238.01.T01 | MTR_3g092490 | 42.857 | 84 | 43 | 2 | 6 | 88 | 22 | 101 | 5.44e-12 | 65.9 |
MsG0380017238.01.T01 | MTR_7g013730 | 44.706 | 85 | 41 | 2 | 10 | 92 | 40 | 120 | 1.00e-11 | 65.1 |
MsG0380017238.01.T01 | MTR_7g107580 | 23.684 | 266 | 158 | 8 | 6 | 270 | 12 | 233 | 1.10e-11 | 66.2 |
MsG0380017238.01.T01 | MTR_4g109540 | 42.169 | 83 | 42 | 2 | 11 | 91 | 43 | 121 | 2.12e-11 | 64.3 |
MsG0380017238.01.T01 | MTR_1g019150 | 26.217 | 267 | 158 | 13 | 12 | 266 | 213 | 452 | 2.60e-11 | 65.5 |
MsG0380017238.01.T01 | MTR_4g035310 | 37.333 | 75 | 47 | 0 | 122 | 196 | 17 | 91 | 2.65e-11 | 63.9 |
MsG0380017238.01.T01 | MTR_4g122650 | 27.717 | 184 | 98 | 6 | 10 | 188 | 88 | 241 | 2.79e-11 | 65.5 |
MsG0380017238.01.T01 | MTR_4g035310 | 37.333 | 75 | 47 | 0 | 122 | 196 | 17 | 91 | 3.03e-11 | 63.9 |
MsG0380017238.01.T01 | MTR_4g104470 | 28.780 | 205 | 116 | 7 | 2 | 199 | 114 | 295 | 3.24e-11 | 63.9 |
MsG0380017238.01.T01 | MTR_1g064230 | 29.648 | 199 | 130 | 5 | 7 | 199 | 81 | 275 | 4.05e-11 | 63.5 |
MsG0380017238.01.T01 | MTR_7g088140 | 22.396 | 192 | 141 | 3 | 6 | 197 | 123 | 306 | 4.39e-11 | 64.7 |
MsG0380017238.01.T01 | MTR_3g027140 | 27.461 | 193 | 115 | 7 | 11 | 196 | 61 | 235 | 5.48e-11 | 62.4 |
MsG0380017238.01.T01 | MTR_3g075500 | 27.500 | 200 | 124 | 6 | 8 | 202 | 107 | 290 | 7.89e-11 | 62.8 |
MsG0380017238.01.T01 | MTR_7g088140 | 22.396 | 192 | 141 | 3 | 6 | 197 | 123 | 306 | 9.68e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380017238.01.T01 | AT1G58470 | 53.922 | 204 | 83 | 4 | 5 | 201 | 1 | 200 | 2.74e-65 | 211 |
MsG0380017238.01.T01 | AT1G58470 | 53.922 | 204 | 83 | 4 | 5 | 201 | 1 | 200 | 2.74e-65 | 211 |
MsG0380017238.01.T01 | AT4G14300 | 52.764 | 199 | 85 | 3 | 5 | 202 | 1 | 191 | 2.52e-62 | 205 |
MsG0380017238.01.T01 | AT4G14300 | 52.764 | 199 | 85 | 3 | 5 | 202 | 1 | 191 | 2.52e-62 | 205 |
MsG0380017238.01.T01 | AT4G26650 | 52.153 | 209 | 80 | 5 | 1 | 200 | 1 | 198 | 8.35e-59 | 197 |
MsG0380017238.01.T01 | AT4G26650 | 52.736 | 201 | 77 | 4 | 7 | 200 | 12 | 201 | 1.78e-58 | 196 |
MsG0380017238.01.T01 | AT2G33410 | 49.000 | 200 | 91 | 4 | 5 | 202 | 1 | 191 | 2.90e-58 | 194 |
MsG0380017238.01.T01 | AT3G07810 | 51.531 | 196 | 86 | 2 | 5 | 200 | 1 | 187 | 6.03e-58 | 196 |
MsG0380017238.01.T01 | AT5G55550 | 47.479 | 238 | 106 | 6 | 5 | 233 | 1 | 228 | 6.11e-58 | 195 |
MsG0380017238.01.T01 | AT5G55550 | 47.479 | 238 | 106 | 6 | 5 | 233 | 1 | 228 | 6.11e-58 | 195 |
MsG0380017238.01.T01 | AT5G55550 | 47.479 | 238 | 106 | 6 | 5 | 233 | 1 | 228 | 6.11e-58 | 195 |
MsG0380017238.01.T01 | AT5G55550 | 47.479 | 238 | 106 | 6 | 5 | 233 | 1 | 228 | 6.11e-58 | 195 |
MsG0380017238.01.T01 | AT5G55550 | 47.479 | 238 | 106 | 6 | 5 | 233 | 1 | 228 | 6.11e-58 | 195 |
MsG0380017238.01.T01 | AT3G07810 | 51.531 | 196 | 86 | 2 | 5 | 200 | 1 | 187 | 6.22e-58 | 196 |
MsG0380017238.01.T01 | AT5G55550 | 47.479 | 238 | 106 | 6 | 5 | 233 | 1 | 228 | 8.81e-58 | 195 |
MsG0380017238.01.T01 | AT5G55550 | 47.479 | 238 | 106 | 6 | 5 | 233 | 1 | 228 | 8.81e-58 | 195 |
MsG0380017238.01.T01 | AT5G55550 | 47.479 | 238 | 106 | 6 | 5 | 233 | 1 | 228 | 8.81e-58 | 195 |
MsG0380017238.01.T01 | AT5G55550 | 47.479 | 238 | 106 | 6 | 5 | 233 | 1 | 228 | 8.81e-58 | 195 |
MsG0380017238.01.T01 | AT5G47620 | 45.909 | 220 | 91 | 4 | 5 | 211 | 1 | 205 | 1.77e-51 | 177 |
MsG0380017238.01.T01 | AT5G47620 | 45.909 | 220 | 91 | 4 | 5 | 211 | 1 | 205 | 1.77e-51 | 177 |
MsG0380017238.01.T01 | AT5G47620 | 45.909 | 220 | 91 | 4 | 5 | 211 | 1 | 205 | 1.77e-51 | 177 |
MsG0380017238.01.T01 | AT5G55550 | 38.488 | 291 | 101 | 7 | 5 | 233 | 1 | 275 | 2.22e-49 | 173 |
MsG0380017238.01.T01 | AT5G55550 | 38.488 | 291 | 101 | 7 | 5 | 233 | 1 | 275 | 4.39e-49 | 173 |
MsG0380017238.01.T01 | AT5G47620 | 41.736 | 242 | 91 | 5 | 5 | 211 | 1 | 227 | 1.23e-46 | 165 |
MsG0380017238.01.T01 | AT5G40490 | 40.933 | 193 | 90 | 4 | 11 | 202 | 43 | 212 | 1.38e-39 | 145 |
MsG0380017238.01.T01 | AT1G17640 | 41.327 | 196 | 94 | 3 | 11 | 205 | 67 | 242 | 1.28e-38 | 142 |
MsG0380017238.01.T01 | AT1G17640 | 41.327 | 196 | 94 | 3 | 11 | 205 | 67 | 242 | 1.28e-38 | 142 |
MsG0380017238.01.T01 | AT1G17640 | 41.327 | 196 | 94 | 3 | 11 | 205 | 67 | 242 | 1.28e-38 | 142 |
MsG0380017238.01.T01 | AT3G13224 | 36.979 | 192 | 99 | 3 | 10 | 200 | 19 | 189 | 5.19e-38 | 140 |
MsG0380017238.01.T01 | AT3G13224 | 37.173 | 191 | 98 | 3 | 11 | 200 | 11 | 180 | 8.63e-38 | 139 |
MsG0380017238.01.T01 | AT3G13224 | 44.048 | 84 | 46 | 1 | 116 | 199 | 5 | 87 | 4.16e-16 | 79.3 |
MsG0380017238.01.T01 | AT5G40490 | 40.000 | 175 | 85 | 3 | 29 | 202 | 40 | 195 | 1.35e-34 | 132 |
MsG0380017238.01.T01 | AT5G40490 | 39.506 | 81 | 47 | 2 | 128 | 208 | 32 | 110 | 4.44e-11 | 64.3 |
MsG0380017238.01.T01 | AT3G13224 | 37.870 | 169 | 84 | 2 | 11 | 179 | 20 | 167 | 1.06e-33 | 125 |
MsG0380017238.01.T01 | AT3G13224 | 46.154 | 78 | 41 | 1 | 122 | 199 | 20 | 96 | 3.29e-15 | 74.7 |
MsG0380017238.01.T01 | AT5G47620 | 44.737 | 152 | 60 | 3 | 73 | 211 | 5 | 145 | 4.24e-30 | 119 |
MsG0380017238.01.T01 | AT5G47620 | 33.673 | 98 | 58 | 3 | 7 | 103 | 43 | 134 | 2.62e-11 | 65.1 |
MsG0380017238.01.T01 | AT4G36960 | 35.938 | 192 | 99 | 3 | 11 | 202 | 4 | 171 | 3.15e-29 | 117 |
MsG0380017238.01.T01 | AT4G36960 | 27.049 | 244 | 129 | 4 | 11 | 211 | 92 | 329 | 2.48e-17 | 83.2 |
MsG0380017238.01.T01 | AT4G36960 | 35.938 | 192 | 99 | 3 | 11 | 202 | 4 | 171 | 3.15e-29 | 117 |
MsG0380017238.01.T01 | AT4G36960 | 27.049 | 244 | 129 | 4 | 11 | 211 | 92 | 329 | 2.48e-17 | 83.2 |
MsG0380017238.01.T01 | AT5G50250 | 29.231 | 195 | 116 | 5 | 8 | 199 | 111 | 286 | 1.68e-16 | 79.7 |
MsG0380017238.01.T01 | AT3G15010 | 25.628 | 199 | 127 | 6 | 1 | 197 | 64 | 243 | 9.27e-16 | 78.6 |
MsG0380017238.01.T01 | AT3G15010 | 25.628 | 199 | 127 | 6 | 1 | 197 | 64 | 243 | 9.27e-16 | 78.6 |
MsG0380017238.01.T01 | AT4G24770 | 28.358 | 201 | 122 | 5 | 2 | 199 | 142 | 323 | 7.68e-15 | 75.1 |
MsG0380017238.01.T01 | AT4G24770 | 28.358 | 201 | 122 | 5 | 2 | 199 | 142 | 323 | 7.68e-15 | 75.1 |
MsG0380017238.01.T01 | AT3G52380 | 31.217 | 189 | 110 | 7 | 8 | 192 | 114 | 286 | 9.12e-13 | 68.9 |
MsG0380017238.01.T01 | AT3G23830 | 39.506 | 81 | 48 | 1 | 120 | 199 | 34 | 114 | 4.00e-12 | 63.5 |
MsG0380017238.01.T01 | AT3G23830 | 42.353 | 85 | 43 | 2 | 10 | 92 | 35 | 115 | 5.80e-11 | 60.5 |
MsG0380017238.01.T01 | AT3G23830 | 39.506 | 81 | 48 | 1 | 120 | 199 | 34 | 114 | 4.00e-12 | 63.5 |
MsG0380017238.01.T01 | AT3G23830 | 42.353 | 85 | 43 | 2 | 10 | 92 | 35 | 115 | 5.80e-11 | 60.5 |
MsG0380017238.01.T01 | AT5G53720 | 41.026 | 78 | 46 | 0 | 119 | 196 | 7 | 84 | 6.18e-12 | 62.0 |
MsG0380017238.01.T01 | AT1G03457 | 27.461 | 193 | 121 | 6 | 6 | 198 | 8 | 181 | 7.38e-12 | 67.0 |
MsG0380017238.01.T01 | AT3G54770 | 33.333 | 117 | 68 | 3 | 6 | 116 | 13 | 125 | 8.24e-12 | 65.5 |
MsG0380017238.01.T01 | AT3G54770 | 33.333 | 117 | 68 | 3 | 6 | 116 | 13 | 125 | 9.96e-12 | 65.1 |
MsG0380017238.01.T01 | AT2G37220 | 28.061 | 196 | 130 | 5 | 11 | 199 | 92 | 283 | 3.50e-11 | 63.9 |
MsG0380017238.01.T01 | AT3G16380 | 25.830 | 271 | 164 | 12 | 6 | 269 | 198 | 438 | 3.94e-11 | 64.7 |
MsG0380017238.01.T01 | AT5G04280 | 40.698 | 86 | 50 | 1 | 122 | 206 | 8 | 93 | 5.89e-11 | 63.5 |
Find 130 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCAATTGATTTGGGGATTT+AGG | 0.140816 | 3:+93865848 | MsG0380017238.01.T01:five_prime_UTR |
ATGCAAAACGTCACCGTATT+TGG | 0.184645 | 3:-93865990 | None:intergenic |
CAAGATACCCATCTTATTCT+TGG | 0.209187 | 3:+93866103 | MsG0380017238.01.T01:CDS |
TCAATTGATTTGGGGATTTA+GGG | 0.262100 | 3:+93865849 | MsG0380017238.01.T01:five_prime_UTR |
TGGTAAAATATGTTTGAAAA+TGG | 0.268523 | 3:-93865970 | None:intergenic |
TAGGTAGTGGTGCCGGAAAT+TGG | 0.271241 | 3:+93867017 | MsG0380017238.01.T01:CDS |
CAGCTCCATCAGATGTTTAT+AGG | 0.291134 | 3:+93866885 | MsG0380017238.01.T01:CDS |
CAGTGCCATGAATTTCAAAA+TGG | 0.298628 | 3:+93865880 | MsG0380017238.01.T01:exon |
TGTTGTAGCTGTTCACTTCT+CGG | 0.300233 | 3:-93866338 | None:intergenic |
CAGATGTTTATAGGAACTTA+TGG | 0.312353 | 3:+93866894 | MsG0380017238.01.T01:CDS |
AAAATCAATTACAGAATAGA+AGG | 0.320623 | 3:+93866360 | MsG0380017238.01.T01:CDS |
GTATATACCTACATAAATTA+AGG | 0.327121 | 3:-93867220 | None:intergenic |
TACGGGTGGGTATGGGTATG+GGG | 0.336881 | 3:+93866850 | MsG0380017238.01.T01:CDS |
CCTACTAGTGATGGAGTATA+TGG | 0.341321 | 3:+93866794 | MsG0380017238.01.T01:CDS |
GGTGGTAGTGTTGGAATAGT+AGG | 0.365653 | 3:+93866998 | MsG0380017238.01.T01:CDS |
AGGTAGTGGTGCCGGAAATT+GGG | 0.368504 | 3:+93867018 | MsG0380017238.01.T01:CDS |
ACTCGAATCCCTAGAGGTTT+CGG | 0.378798 | 3:+93866037 | MsG0380017238.01.T01:CDS |
CTACGGGTGGGTATGGGTAT+GGG | 0.381893 | 3:+93866849 | MsG0380017238.01.T01:CDS |
CCTACGGGTGGGTATGGGTA+TGG | 0.383326 | 3:+93866848 | MsG0380017238.01.T01:CDS |
TGGTACCCTACGGGTGGGTA+TGG | 0.397098 | 3:+93866842 | MsG0380017238.01.T01:CDS |
GAAGCTTTAGGAACAGAGTA+AGG | 0.397178 | 3:+93865822 | MsG0380017238.01.T01:five_prime_UTR |
GCTACTTGTCTTGTTTGCTA+TGG | 0.399105 | 3:+93867347 | MsG0380017238.01.T01:three_prime_UTR |
ATAAGATATAAGAGTGATAG+AGG | 0.401002 | 3:+93866701 | MsG0380017238.01.T01:CDS |
AAGAGGTACTTTGAGAGGTT+TGG | 0.403952 | 3:+93866482 | MsG0380017238.01.T01:CDS |
AATGTGGGAATGAACATATT+AGG | 0.405130 | 3:+93866405 | MsG0380017238.01.T01:CDS |
ACAAATCCATTGACAATATG+AGG | 0.410512 | 3:-93867088 | None:intergenic |
AGATTATCAGTAGAGGATTC+AGG | 0.416082 | 3:+93867370 | MsG0380017238.01.T01:three_prime_UTR |
GACCAGCCTCATATTGTCAA+TGG | 0.418491 | 3:+93867082 | MsG0380017238.01.T01:CDS |
ACAGTAAAGTATGAAGCTTT+AGG | 0.422918 | 3:+93865810 | MsG0380017238.01.T01:five_prime_UTR |
GCTGTATATAGGTAGAAGTT+AGG | 0.446414 | 3:+93866306 | MsG0380017238.01.T01:intron |
ATGGTGTAATAGCTTGTCAT+TGG | 0.446916 | 3:+93867293 | MsG0380017238.01.T01:three_prime_UTR |
TTACCTTTGCCTACTAGTGA+TGG | 0.454799 | 3:+93866785 | MsG0380017238.01.T01:CDS |
AACTGATGTCGTGGTGATGC+AGG | 0.456579 | 3:+93866511 | MsG0380017238.01.T01:CDS |
ACGGGTGGGTATGGGTATGG+GGG | 0.458994 | 3:+93866851 | MsG0380017238.01.T01:CDS |
GTAGGCAGGTGGAGGTTAAG+AGG | 0.461437 | 3:+93866633 | MsG0380017238.01.T01:CDS |
TATGGTGGGCAAATGGTAAC+TGG | 0.461446 | 3:+93866917 | MsG0380017238.01.T01:CDS |
ATTTGTTGCAGACCCAAGAA+TGG | 0.463173 | 3:-93867050 | None:intergenic |
TACATGCTGACTGCTGCATC+TGG | 0.470442 | 3:+93867240 | MsG0380017238.01.T01:three_prime_UTR |
AGAGGGCAGTTCCGAGGGAG+GGG | 0.471408 | 3:+93866651 | MsG0380017238.01.T01:CDS |
GAATAAGATGGGTATCTTGA+AGG | 0.478134 | 3:-93866099 | None:intergenic |
CTATGGTTGTTGGTACCCTA+CGG | 0.479004 | 3:+93866832 | MsG0380017238.01.T01:CDS |
AGGGAACATGTTTCCTGCCA+TGG | 0.485899 | 3:+93866757 | MsG0380017238.01.T01:CDS |
GGTACCCTACGGGTGGGTAT+GGG | 0.489172 | 3:+93866843 | MsG0380017238.01.T01:CDS |
TCATGACTTGAATGGTAGGC+AGG | 0.489984 | 3:+93866619 | MsG0380017238.01.T01:CDS |
AGTTTAAGAGGTACTTTGAG+AGG | 0.492503 | 3:+93866477 | MsG0380017238.01.T01:CDS |
CTTATGGTATGGTGGGCAAA+TGG | 0.494724 | 3:+93866910 | MsG0380017238.01.T01:CDS |
TGGTCCTCAGGCTTATCATC+AGG | 0.495120 | 3:+93866937 | MsG0380017238.01.T01:CDS |
GTAACGAAACCGAAACCTCT+AGG | 0.497010 | 3:-93866046 | None:intergenic |
GGTTAAGAGGGCAGTTCCGA+GGG | 0.504393 | 3:+93866646 | MsG0380017238.01.T01:CDS |
GGTAGTGGTGCCGGAAATTG+GGG | 0.509354 | 3:+93867019 | MsG0380017238.01.T01:CDS |
CCATCTTATTCTTGGACGAA+AGG | 0.510048 | 3:+93866111 | MsG0380017238.01.T01:CDS |
GCTATAGTGGTTACGAATGT+GGG | 0.511670 | 3:+93866390 | MsG0380017238.01.T01:CDS |
TGGTGTAATAGCTTGTCATT+GGG | 0.511964 | 3:+93867294 | MsG0380017238.01.T01:three_prime_UTR |
TGTCTGTGGAAGAGTTTAAG+AGG | 0.514084 | 3:+93866465 | MsG0380017238.01.T01:CDS |
TTCAATATGCCATCGCCTCA+TGG | 0.514604 | 3:+93867115 | MsG0380017238.01.T01:CDS |
TGTTGAGCCTTAATTTATGT+AGG | 0.515660 | 3:+93867213 | MsG0380017238.01.T01:three_prime_UTR |
CCTTTCGTCCAAGAATAAGA+TGG | 0.515929 | 3:-93866111 | None:intergenic |
CGTAGGGTACCAACAACCAT+AGG | 0.517439 | 3:-93866831 | None:intergenic |
CATGGTGTAAAGCAGATTGT+TGG | 0.518341 | 3:+93867133 | MsG0380017238.01.T01:CDS |
TGAGGCGATGGCATATTGAA+TGG | 0.519793 | 3:-93867112 | None:intergenic |
GCAAATGGTAACTGGTCCTC+AGG | 0.523351 | 3:+93866925 | MsG0380017238.01.T01:CDS |
GATCAAATCCCTATGGTTGT+TGG | 0.523642 | 3:+93866822 | MsG0380017238.01.T01:CDS |
TCTTCCACAGACATATTAGT+AGG | 0.524280 | 3:-93866455 | None:intergenic |
CCATATACTCCATCACTAGT+AGG | 0.526921 | 3:-93866794 | None:intergenic |
AGCTATAGTGGTTACGAATG+TGG | 0.527900 | 3:+93866389 | MsG0380017238.01.T01:CDS |
GAATCAACATTCCCCTCCCT+CGG | 0.539260 | 3:-93866662 | None:intergenic |
CGGGTGGGTATGGGTATGGG+GGG | 0.541423 | 3:+93866852 | MsG0380017238.01.T01:CDS |
CATATTTATGACACATAGAA+AGG | 0.543908 | 3:-93867317 | None:intergenic |
TAGGCAGGTGGAGGTTAAGA+GGG | 0.544226 | 3:+93866634 | MsG0380017238.01.T01:CDS |
AATAAGATGGGTATCTTGAA+GGG | 0.544817 | 3:-93866098 | None:intergenic |
TATAGGAACTTATGGTATGG+TGG | 0.545556 | 3:+93866902 | MsG0380017238.01.T01:CDS |
ATGGCAGGAAACATGTTCCC+TGG | 0.546559 | 3:-93866755 | None:intergenic |
ACATGTTCCCTGGACTAGAA+TGG | 0.547477 | 3:-93866745 | None:intergenic |
AAGTTCCTATAAACATCTGA+TGG | 0.548675 | 3:-93866890 | None:intergenic |
GAGGGGAATGTTGATTCTGA+GGG | 0.551220 | 3:+93866668 | MsG0380017238.01.T01:CDS |
TCAGTATATTCTTTCCTACA+TGG | 0.551410 | 3:+93867274 | MsG0380017238.01.T01:three_prime_UTR |
AAGCTTTAGGAACAGAGTAA+GGG | 0.551449 | 3:+93865823 | MsG0380017238.01.T01:five_prime_UTR |
ATAGGAACTTATGGTATGGT+GGG | 0.551798 | 3:+93866903 | MsG0380017238.01.T01:CDS |
ATCCATTGACAATATGAGGC+TGG | 0.552395 | 3:-93867084 | None:intergenic |
GTTTATAGGAACTTATGGTA+TGG | 0.554821 | 3:+93866899 | MsG0380017238.01.T01:CDS |
CTTTCGTCCAAGAATAAGAT+GGG | 0.555266 | 3:-93866110 | None:intergenic |
AAAGGTAAAGGAGCCATGGC+AGG | 0.555428 | 3:-93866770 | None:intergenic |
AATGCCACCGACGAAGAGCT+TGG | 0.555484 | 3:-93865915 | None:intergenic |
TATGGTTGTTGGTACCCTAC+GGG | 0.556496 | 3:+93866833 | MsG0380017238.01.T01:CDS |
AGTGATGGAGTATATGGATA+CGG | 0.560073 | 3:+93866800 | MsG0380017238.01.T01:CDS |
AGGCAAAGGTAAAGGAGCCA+TGG | 0.560567 | 3:-93866774 | None:intergenic |
TCACTAGTAGGCAAAGGTAA+AGG | 0.562957 | 3:-93866782 | None:intergenic |
TGCTTTACACCATGAGGCGA+TGG | 0.564045 | 3:-93867124 | None:intergenic |
AAGAGGGCAGTTCCGAGGGA+GGG | 0.564061 | 3:+93866650 | MsG0380017238.01.T01:CDS |
CTTGAATGGTAGGCAGGTGG+AGG | 0.564078 | 3:+93866625 | MsG0380017238.01.T01:CDS |
AAATCAATTACAGAATAGAA+GGG | 0.576562 | 3:+93866361 | MsG0380017238.01.T01:CDS |
TAAGAGGGCAGTTCCGAGGG+AGG | 0.576798 | 3:+93866649 | MsG0380017238.01.T01:CDS |
GGAGGGGAATGTTGATTCTG+AGG | 0.578456 | 3:+93866667 | MsG0380017238.01.T01:CDS |
ATAGTGTAACTCATAGGCCG+AGG | 0.580477 | 3:+93866534 | MsG0380017238.01.T01:CDS |
ATGTCAAGTGTTGTATATGT+AGG | 0.581727 | 3:+93866977 | MsG0380017238.01.T01:CDS |
TAACGAAACCGAAACCTCTA+GGG | 0.582846 | 3:-93866045 | None:intergenic |
TGAAATCTCCAGTTGACATA+CGG | 0.586693 | 3:+93867183 | MsG0380017238.01.T01:exon |
GGTTGTTGGTACCCTACGGG+TGG | 0.587178 | 3:+93866836 | MsG0380017238.01.T01:CDS |
GGAATAGTAGGTAGTGGTGC+CGG | 0.589920 | 3:+93867010 | MsG0380017238.01.T01:CDS |
AGGTTAAGAGGGCAGTTCCG+AGG | 0.593306 | 3:+93866645 | MsG0380017238.01.T01:CDS |
AATCAATTACAGAATAGAAG+GGG | 0.594063 | 3:+93866362 | MsG0380017238.01.T01:CDS |
GATAAAGCCAAGCTCTTCGT+CGG | 0.601660 | 3:+93865908 | MsG0380017238.01.T01:CDS |
TGCAGGATAGTGTAACTCAT+AGG | 0.602760 | 3:+93866528 | MsG0380017238.01.T01:CDS |
GCTATGGAGATTATCAGTAG+AGG | 0.610993 | 3:+93867363 | MsG0380017238.01.T01:three_prime_UTR |
TAGTGTAACTCATAGGCCGA+GGG | 0.612340 | 3:+93866535 | MsG0380017238.01.T01:CDS |
GGATACGGATCAAATCCCTA+TGG | 0.612447 | 3:+93866815 | MsG0380017238.01.T01:CDS |
CTTGACATAACATTAGCGTA+AGG | 0.614433 | 3:-93866962 | None:intergenic |
TGCTGCATCTGGTCTATGAA+AGG | 0.614634 | 3:+93867251 | MsG0380017238.01.T01:three_prime_UTR |
GTAGGGTACCAACAACCATA+GGG | 0.623021 | 3:-93866830 | None:intergenic |
GTATATGTAGGTGGTAGTGT+TGG | 0.626577 | 3:+93866989 | MsG0380017238.01.T01:CDS |
GTTGTTGGTACCCTACGGGT+GGG | 0.634108 | 3:+93866837 | MsG0380017238.01.T01:CDS |
ACTCCATCACTAGTAGGCAA+AGG | 0.634270 | 3:-93866788 | None:intergenic |
CCATACCCATACCCACCCGT+AGG | 0.634708 | 3:-93866848 | None:intergenic |
TGACTTGAATGGTAGGCAGG+TGG | 0.636473 | 3:+93866622 | MsG0380017238.01.T01:CDS |
CTCTAGGGATTCGAGTGGTG+CGG | 0.637732 | 3:-93866030 | None:intergenic |
CATACCCATACCCACCCGTA+GGG | 0.641911 | 3:-93866847 | None:intergenic |
CGCACCACTCGAATCCCTAG+AGG | 0.642133 | 3:+93866031 | MsG0380017238.01.T01:CDS |
TTTACCTACTAATATGTCTG+TGG | 0.643857 | 3:+93866451 | MsG0380017238.01.T01:CDS |
AGTGTTGGAATAGTAGGTAG+TGG | 0.645738 | 3:+93867004 | MsG0380017238.01.T01:CDS |
AAAGCCAAGCTCTTCGTCGG+TGG | 0.645926 | 3:+93865911 | MsG0380017238.01.T01:CDS |
ATCAATTACAGAATAGAAGG+GGG | 0.646771 | 3:+93866363 | MsG0380017238.01.T01:CDS |
TGGTCGAATAACTGATGTCG+TGG | 0.654008 | 3:+93866502 | MsG0380017238.01.T01:CDS |
TCAAGTGTTGTATATGTAGG+TGG | 0.672547 | 3:+93866980 | MsG0380017238.01.T01:CDS |
ACAATCTGCTTTACACCATG+AGG | 0.677423 | 3:-93867130 | None:intergenic |
GTGTAACTCATAGGCCGAGG+GGG | 0.683925 | 3:+93866537 | MsG0380017238.01.T01:CDS |
GGCACCTGATGATAAGCCTG+AGG | 0.693812 | 3:-93866941 | None:intergenic |
GACAAGCTATTACACCATGT+AGG | 0.699063 | 3:-93867288 | None:intergenic |
AGTGTAACTCATAGGCCGAG+GGG | 0.715312 | 3:+93866536 | MsG0380017238.01.T01:CDS |
GAAACCTCTAGGGATTCGAG+TGG | 0.734748 | 3:-93866035 | None:intergenic |
GTAGTGGTGCCGGAAATTGG+GGG | 0.748996 | 3:+93867020 | MsG0380017238.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAGTGAAAACAAAAAATTA+AGG | - | Chr3:93866181-93866200 | None:intergenic | 15.0% |
!! | AAAATCAATTACAGAATAGA+AGG | + | Chr3:93866360-93866379 | MsG0380017238.01.T01:CDS | 20.0% |
!! | AAATCAATTACAGAATAGAA+GGG | + | Chr3:93866361-93866380 | MsG0380017238.01.T01:CDS | 20.0% |
!! | GTATATACCTACATAAATTA+AGG | - | Chr3:93867223-93867242 | None:intergenic | 20.0% |
!! | TGAAAACAAAAAATTAAGGA+AGG | - | Chr3:93866177-93866196 | None:intergenic | 20.0% |
!! | TGGTAAAATATGTTTGAAAA+TGG | - | Chr3:93865973-93865992 | None:intergenic | 20.0% |
!!! | CAAACATATTTTACCAAATA+CGG | + | Chr3:93865977-93865996 | MsG0380017238.01.T01:CDS | 20.0% |
! | AATCAATTACAGAATAGAAG+GGG | + | Chr3:93866362-93866381 | MsG0380017238.01.T01:CDS | 25.0% |
! | ATAAGATATAAGAGTGATAG+AGG | + | Chr3:93866701-93866720 | MsG0380017238.01.T01:CDS | 25.0% |
! | ATGAAACAAAGAAATGAAGA+AGG | - | Chr3:93866148-93866167 | None:intergenic | 25.0% |
! | CATATTTATGACACATAGAA+AGG | - | Chr3:93867320-93867339 | None:intergenic | 25.0% |
! | GTAAATTGTGTTTGTTTGAT+TGG | + | Chr3:93866273-93866292 | MsG0380017238.01.T01:intron | 25.0% |
!!! | AGAATCCATTTTGAAATTCA+TGG | - | Chr3:93865888-93865907 | None:intergenic | 25.0% |
!!! | TAAGGGTTTTCAATTGATTT+GGG | + | Chr3:93865840-93865859 | MsG0380017238.01.T01:five_prime_UTR | 25.0% |
AAGTTCCTATAAACATCTGA+TGG | - | Chr3:93866893-93866912 | None:intergenic | 30.0% | |
AATAAGATGGGTATCTTGAA+GGG | - | Chr3:93866101-93866120 | None:intergenic | 30.0% | |
AATGTGGGAATGAACATATT+AGG | + | Chr3:93866405-93866424 | MsG0380017238.01.T01:CDS | 30.0% | |
ACAAATCCATTGACAATATG+AGG | - | Chr3:93867091-93867110 | None:intergenic | 30.0% | |
ACAGTAAAGTATGAAGCTTT+AGG | + | Chr3:93865810-93865829 | MsG0380017238.01.T01:five_prime_UTR | 30.0% | |
ATCAATTACAGAATAGAAGG+GGG | + | Chr3:93866363-93866382 | MsG0380017238.01.T01:CDS | 30.0% | |
CAGATGTTTATAGGAACTTA+TGG | + | Chr3:93866894-93866913 | MsG0380017238.01.T01:CDS | 30.0% | |
GTTTATAGGAACTTATGGTA+TGG | + | Chr3:93866899-93866918 | MsG0380017238.01.T01:CDS | 30.0% | |
TCAGTATATTCTTTCCTACA+TGG | + | Chr3:93867274-93867293 | MsG0380017238.01.T01:three_prime_UTR | 30.0% | |
TGTTGAGCCTTAATTTATGT+AGG | + | Chr3:93867213-93867232 | MsG0380017238.01.T01:three_prime_UTR | 30.0% | |
TTTACCTACTAATATGTCTG+TGG | + | Chr3:93866451-93866470 | MsG0380017238.01.T01:CDS | 30.0% | |
! | ACAAGTTTTCATGACTTGAA+TGG | + | Chr3:93866611-93866630 | MsG0380017238.01.T01:CDS | 30.0% |
! | ACTAAGAAGATTTTTGTTGG+TGG | + | Chr3:93866428-93866447 | MsG0380017238.01.T01:CDS | 30.0% |
! | AGGACTAAGAAGATTTTTGT+TGG | + | Chr3:93866425-93866444 | MsG0380017238.01.T01:CDS | 30.0% |
! | ATGTCAAGTGTTGTATATGT+AGG | + | Chr3:93866977-93866996 | MsG0380017238.01.T01:CDS | 30.0% |
! | GTAAGGGTTTTCAATTGATT+TGG | + | Chr3:93865839-93865858 | MsG0380017238.01.T01:five_prime_UTR | 30.0% |
!! | TACTTTTGATTCTGAAGACT+CGG | + | Chr3:93866571-93866590 | MsG0380017238.01.T01:CDS | 30.0% |
!! | TCAATTGATTTGGGGATTTA+GGG | + | Chr3:93865849-93865868 | MsG0380017238.01.T01:five_prime_UTR | 30.0% |
!! | TGTTTGTTTGATTGGTTTCA+TGG | + | Chr3:93866281-93866300 | MsG0380017238.01.T01:intron | 30.0% |
!! | TTCAATTGATTTGGGGATTT+AGG | + | Chr3:93865848-93865867 | MsG0380017238.01.T01:five_prime_UTR | 30.0% |
!!! | AAGGGTTTTCAATTGATTTG+GGG | + | Chr3:93865841-93865860 | MsG0380017238.01.T01:five_prime_UTR | 30.0% |
!!! | TCAAGTTTTAAAGGAAGCAA+TGG | + | Chr3:93867160-93867179 | MsG0380017238.01.T01:CDS | 30.0% |
AGATTATCAGTAGAGGATTC+AGG | + | Chr3:93867370-93867389 | MsG0380017238.01.T01:three_prime_UTR | 35.0% | |
ATAGGAACTTATGGTATGGT+GGG | + | Chr3:93866903-93866922 | MsG0380017238.01.T01:CDS | 35.0% | |
CAAGATACCCATCTTATTCT+TGG | + | Chr3:93866103-93866122 | MsG0380017238.01.T01:CDS | 35.0% | |
CAGTGCCATGAATTTCAAAA+TGG | + | Chr3:93865880-93865899 | MsG0380017238.01.T01:exon | 35.0% | |
CTTGACATAACATTAGCGTA+AGG | - | Chr3:93866965-93866984 | None:intergenic | 35.0% | |
CTTTCGTCCAAGAATAAGAT+GGG | - | Chr3:93866113-93866132 | None:intergenic | 35.0% | |
GAATAAGATGGGTATCTTGA+AGG | - | Chr3:93866102-93866121 | None:intergenic | 35.0% | |
GCTGTATATAGGTAGAAGTT+AGG | + | Chr3:93866306-93866325 | MsG0380017238.01.T01:intron | 35.0% | |
GTTTCATGGTTGCTGTATAT+AGG | + | Chr3:93866295-93866314 | MsG0380017238.01.T01:intron | 35.0% | |
TATAGGAACTTATGGTATGG+TGG | + | Chr3:93866902-93866921 | MsG0380017238.01.T01:CDS | 35.0% | |
TCTTCCACAGACATATTAGT+AGG | - | Chr3:93866458-93866477 | None:intergenic | 35.0% | |
TGAAATCTCCAGTTGACATA+CGG | + | Chr3:93867183-93867202 | MsG0380017238.01.T01:exon | 35.0% | |
TTATTCTTGGACGAAAGGTT+CGG | + | Chr3:93866116-93866135 | MsG0380017238.01.T01:intron | 35.0% | |
! | AACTTTTACCGTATGTCAAC+TGG | - | Chr3:93867194-93867213 | None:intergenic | 35.0% |
! | AGTGATGGAGTATATGGATA+CGG | + | Chr3:93866800-93866819 | MsG0380017238.01.T01:CDS | 35.0% |
! | ATGGTGTAATAGCTTGTCAT+TGG | + | Chr3:93867293-93867312 | MsG0380017238.01.T01:three_prime_UTR | 35.0% |
! | GTTTTCATGACTTGAATGGT+AGG | + | Chr3:93866615-93866634 | MsG0380017238.01.T01:CDS | 35.0% |
! | TCAAGTGTTGTATATGTAGG+TGG | + | Chr3:93866980-93866999 | MsG0380017238.01.T01:CDS | 35.0% |
! | TGGTGTAATAGCTTGTCATT+GGG | + | Chr3:93867294-93867313 | MsG0380017238.01.T01:three_prime_UTR | 35.0% |
!! | AAGCTTTAGGAACAGAGTAA+GGG | + | Chr3:93865823-93865842 | MsG0380017238.01.T01:five_prime_UTR | 35.0% |
!! | AGTTTAAGAGGTACTTTGAG+AGG | + | Chr3:93866477-93866496 | MsG0380017238.01.T01:CDS | 35.0% |
ACAATCTGCTTTACACCATG+AGG | - | Chr3:93867133-93867152 | None:intergenic | 40.0% | |
AGCTATAGTGGTTACGAATG+TGG | + | Chr3:93866389-93866408 | MsG0380017238.01.T01:CDS | 40.0% | |
ATCCATTGACAATATGAGGC+TGG | - | Chr3:93867087-93867106 | None:intergenic | 40.0% | |
ATGCAAAACGTCACCGTATT+TGG | - | Chr3:93865993-93866012 | None:intergenic | 40.0% | |
CAGCTCCATCAGATGTTTAT+AGG | + | Chr3:93866885-93866904 | MsG0380017238.01.T01:CDS | 40.0% | |
CATGGTGTAAAGCAGATTGT+TGG | + | Chr3:93867133-93867152 | MsG0380017238.01.T01:CDS | 40.0% | |
CCATATACTCCATCACTAGT+AGG | - | Chr3:93866797-93866816 | None:intergenic | 40.0% | |
CCATCTTATTCTTGGACGAA+AGG | + | Chr3:93866111-93866130 | MsG0380017238.01.T01:CDS | 40.0% | |
CCTTTCGTCCAAGAATAAGA+TGG | - | Chr3:93866114-93866133 | None:intergenic | 40.0% | |
GACAAGCTATTACACCATGT+AGG | - | Chr3:93867291-93867310 | None:intergenic | 40.0% | |
GATCAAATCCCTATGGTTGT+TGG | + | Chr3:93866822-93866841 | MsG0380017238.01.T01:CDS | 40.0% | |
GCTATAGTGGTTACGAATGT+GGG | + | Chr3:93866390-93866409 | MsG0380017238.01.T01:CDS | 40.0% | |
GCTATGGAGATTATCAGTAG+AGG | + | Chr3:93867363-93867382 | MsG0380017238.01.T01:three_prime_UTR | 40.0% | |
TAACGAAACCGAAACCTCTA+GGG | - | Chr3:93866048-93866067 | None:intergenic | 40.0% | |
TCACTAGTAGGCAAAGGTAA+AGG | - | Chr3:93866785-93866804 | None:intergenic | 40.0% | |
TGCAGGATAGTGTAACTCAT+AGG | + | Chr3:93866528-93866547 | MsG0380017238.01.T01:CDS | 40.0% | |
TGTCTGTGGAAGAGTTTAAG+AGG | + | Chr3:93866465-93866484 | MsG0380017238.01.T01:CDS | 40.0% | |
TGTTGTAGCTGTTCACTTCT+CGG | - | Chr3:93866341-93866360 | None:intergenic | 40.0% | |
TTACCTTTGCCTACTAGTGA+TGG | + | Chr3:93866785-93866804 | MsG0380017238.01.T01:CDS | 40.0% | |
! | AGTGTTGGAATAGTAGGTAG+TGG | + | Chr3:93867004-93867023 | MsG0380017238.01.T01:CDS | 40.0% |
! | AGTTTTCACCATTCTAGTCC+AGG | + | Chr3:93866737-93866756 | MsG0380017238.01.T01:CDS | 40.0% |
! | ATTTGTTGCAGACCCAAGAA+TGG | - | Chr3:93867053-93867072 | None:intergenic | 40.0% |
! | CCTACTAGTGATGGAGTATA+TGG | + | Chr3:93866794-93866813 | MsG0380017238.01.T01:CDS | 40.0% |
! | GTATATGTAGGTGGTAGTGT+TGG | + | Chr3:93866989-93867008 | MsG0380017238.01.T01:CDS | 40.0% |
! | GTTTTCACCATTCTAGTCCA+GGG | + | Chr3:93866738-93866757 | MsG0380017238.01.T01:CDS | 40.0% |
!! | AAGAGGTACTTTGAGAGGTT+TGG | + | Chr3:93866482-93866501 | MsG0380017238.01.T01:CDS | 40.0% |
!! | GAAGCTTTAGGAACAGAGTA+AGG | + | Chr3:93865822-93865841 | MsG0380017238.01.T01:five_prime_UTR | 40.0% |
!! | GCTACTTGTCTTGTTTGCTA+TGG | + | Chr3:93867347-93867366 | MsG0380017238.01.T01:three_prime_UTR | 40.0% |
!! | GTTGGCGCTTCAAGTTTTAA+AGG | + | Chr3:93867151-93867170 | MsG0380017238.01.T01:CDS | 40.0% |
ACTCCATCACTAGTAGGCAA+AGG | - | Chr3:93866791-93866810 | None:intergenic | 45.0% | |
ACTCGAATCCCTAGAGGTTT+CGG | + | Chr3:93866037-93866056 | MsG0380017238.01.T01:CDS | 45.0% | |
AGAAGGGGGAATAGCTATAG+TGG | + | Chr3:93866377-93866396 | MsG0380017238.01.T01:CDS | 45.0% | |
ATAGTGTAACTCATAGGCCG+AGG | + | Chr3:93866534-93866553 | MsG0380017238.01.T01:CDS | 45.0% | |
CTATGGTTGTTGGTACCCTA+CGG | + | Chr3:93866832-93866851 | MsG0380017238.01.T01:CDS | 45.0% | |
GACCAGCCTCATATTGTCAA+TGG | + | Chr3:93867082-93867101 | MsG0380017238.01.T01:CDS | 45.0% | |
GATAAAGCCAAGCTCTTCGT+CGG | + | Chr3:93865908-93865927 | MsG0380017238.01.T01:CDS | 45.0% | |
GGAATTGTACCCCCAATTTC+CGG | - | Chr3:93867032-93867051 | None:intergenic | 45.0% | |
GGATACGGATCAAATCCCTA+TGG | + | Chr3:93866815-93866834 | MsG0380017238.01.T01:CDS | 45.0% | |
GTAACGAAACCGAAACCTCT+AGG | - | Chr3:93866049-93866068 | None:intergenic | 45.0% | |
GTAATAAACCCAAACCCCCT+CGG | - | Chr3:93866554-93866573 | None:intergenic | 45.0% | |
TAGTGTAACTCATAGGCCGA+GGG | + | Chr3:93866535-93866554 | MsG0380017238.01.T01:CDS | 45.0% | |
TATGGTTGTTGGTACCCTAC+GGG | + | Chr3:93866833-93866852 | MsG0380017238.01.T01:CDS | 45.0% | |
TCATGACTTGAATGGTAGGC+AGG | + | Chr3:93866619-93866638 | MsG0380017238.01.T01:CDS | 45.0% | |
TGAGGCGATGGCATATTGAA+TGG | - | Chr3:93867115-93867134 | None:intergenic | 45.0% | |
TGCTGCATCTGGTCTATGAA+AGG | + | Chr3:93867251-93867270 | MsG0380017238.01.T01:three_prime_UTR | 45.0% | |
TGGTCGAATAACTGATGTCG+TGG | + | Chr3:93866502-93866521 | MsG0380017238.01.T01:CDS | 45.0% | |
TTCAATATGCCATCGCCTCA+TGG | + | Chr3:93867115-93867134 | MsG0380017238.01.T01:CDS | 45.0% | |
! | ACATGTTCCCTGGACTAGAA+TGG | - | Chr3:93866748-93866767 | None:intergenic | 45.0% |
! | GGGGGTACAATTCCATTCTT+GGG | + | Chr3:93867038-93867057 | MsG0380017238.01.T01:CDS | 45.0% |
! | GGTGGTAGTGTTGGAATAGT+AGG | + | Chr3:93866998-93867017 | MsG0380017238.01.T01:CDS | 45.0% |
! | GTAGGGTACCAACAACCATA+GGG | - | Chr3:93866833-93866852 | None:intergenic | 45.0% |
! | TGGGGGTACAATTCCATTCT+TGG | + | Chr3:93867037-93867056 | MsG0380017238.01.T01:CDS | 45.0% |
!! | CTTATGGTATGGTGGGCAAA+TGG | + | Chr3:93866910-93866929 | MsG0380017238.01.T01:CDS | 45.0% |
!! | GAGGGGAATGTTGATTCTGA+GGG | + | Chr3:93866668-93866687 | MsG0380017238.01.T01:CDS | 45.0% |
!! | TATGGTGGGCAAATGGTAAC+TGG | + | Chr3:93866917-93866936 | MsG0380017238.01.T01:CDS | 45.0% |
AAAGGTAAAGGAGCCATGGC+AGG | - | Chr3:93866773-93866792 | None:intergenic | 50.0% | |
AGGCAAAGGTAAAGGAGCCA+TGG | - | Chr3:93866777-93866796 | None:intergenic | 50.0% | |
AGGGAACATGTTTCCTGCCA+TGG | + | Chr3:93866757-93866776 | MsG0380017238.01.T01:CDS | 50.0% | |
AGTGTAACTCATAGGCCGAG+GGG | + | Chr3:93866536-93866555 | MsG0380017238.01.T01:CDS | 50.0% | |
ATGGCAGGAAACATGTTCCC+TGG | - | Chr3:93866758-93866777 | None:intergenic | 50.0% | |
GAATCAACATTCCCCTCCCT+CGG | - | Chr3:93866665-93866684 | None:intergenic | 50.0% | |
GCAAATGGTAACTGGTCCTC+AGG | + | Chr3:93866925-93866944 | MsG0380017238.01.T01:CDS | 50.0% | |
TAGGCAGGTGGAGGTTAAGA+GGG | + | Chr3:93866634-93866653 | MsG0380017238.01.T01:CDS | 50.0% | |
TGACTTGAATGGTAGGCAGG+TGG | + | Chr3:93866622-93866641 | MsG0380017238.01.T01:CDS | 50.0% | |
TGCTTTACACCATGAGGCGA+TGG | - | Chr3:93867127-93867146 | None:intergenic | 50.0% | |
TGGTCCTCAGGCTTATCATC+AGG | + | Chr3:93866937-93866956 | MsG0380017238.01.T01:CDS | 50.0% | |
! | AACTGATGTCGTGGTGATGC+AGG | + | Chr3:93866511-93866530 | MsG0380017238.01.T01:CDS | 50.0% |
! | AGGTAGTGGTGCCGGAAATT+GGG | + | Chr3:93867018-93867037 | MsG0380017238.01.T01:CDS | 50.0% |
! | CGTAGGGTACCAACAACCAT+AGG | - | Chr3:93866834-93866853 | None:intergenic | 50.0% |
! | GAAACCTCTAGGGATTCGAG+TGG | - | Chr3:93866038-93866057 | None:intergenic | 50.0% |
! | GGAATAGTAGGTAGTGGTGC+CGG | + | Chr3:93867010-93867029 | MsG0380017238.01.T01:CDS | 50.0% |
! | TACATGCTGACTGCTGCATC+TGG | + | Chr3:93867240-93867259 | MsG0380017238.01.T01:three_prime_UTR | 50.0% |
! | TAGGTAGTGGTGCCGGAAAT+TGG | + | Chr3:93867017-93867036 | MsG0380017238.01.T01:CDS | 50.0% |
!! | GGAGGGGAATGTTGATTCTG+AGG | + | Chr3:93866667-93866686 | MsG0380017238.01.T01:CDS | 50.0% |
AAAGCCAAGCTCTTCGTCGG+TGG | + | Chr3:93865911-93865930 | MsG0380017238.01.T01:CDS | 55.0% | |
AATGCCACCGACGAAGAGCT+TGG | - | Chr3:93865918-93865937 | None:intergenic | 55.0% | |
AGGTTAAGAGGGCAGTTCCG+AGG | + | Chr3:93866645-93866664 | MsG0380017238.01.T01:CDS | 55.0% | |
CATACCCATACCCACCCGTA+GGG | - | Chr3:93866850-93866869 | None:intergenic | 55.0% | |
CTACGGGTGGGTATGGGTAT+GGG | + | Chr3:93866849-93866868 | MsG0380017238.01.T01:CDS | 55.0% | |
CTTGAATGGTAGGCAGGTGG+AGG | + | Chr3:93866625-93866644 | MsG0380017238.01.T01:CDS | 55.0% | |
GGCACCTGATGATAAGCCTG+AGG | - | Chr3:93866944-93866963 | None:intergenic | 55.0% | |
GGTTAAGAGGGCAGTTCCGA+GGG | + | Chr3:93866646-93866665 | MsG0380017238.01.T01:CDS | 55.0% | |
GTAGGCAGGTGGAGGTTAAG+AGG | + | Chr3:93866633-93866652 | MsG0380017238.01.T01:CDS | 55.0% | |
GTGTAACTCATAGGCCGAGG+GGG | + | Chr3:93866537-93866556 | MsG0380017238.01.T01:CDS | 55.0% | |
GTTGTTGGTACCCTACGGGT+GGG | + | Chr3:93866837-93866856 | MsG0380017238.01.T01:CDS | 55.0% | |
TACGGGTGGGTATGGGTATG+GGG | + | Chr3:93866850-93866869 | MsG0380017238.01.T01:CDS | 55.0% | |
! | CTCTAGGGATTCGAGTGGTG+CGG | - | Chr3:93866033-93866052 | None:intergenic | 55.0% |
! | GGTAGTGGTGCCGGAAATTG+GGG | + | Chr3:93867019-93867038 | MsG0380017238.01.T01:CDS | 55.0% |
! | GTAGTGGTGCCGGAAATTGG+GGG | + | Chr3:93867020-93867039 | MsG0380017238.01.T01:CDS | 55.0% |
AAGAGGGCAGTTCCGAGGGA+GGG | + | Chr3:93866650-93866669 | MsG0380017238.01.T01:CDS | 60.0% | |
ACGGGTGGGTATGGGTATGG+GGG | + | Chr3:93866851-93866870 | MsG0380017238.01.T01:CDS | 60.0% | |
ACTCATAGGCCGAGGGGGTT+TGG | + | Chr3:93866542-93866561 | MsG0380017238.01.T01:CDS | 60.0% | |
CCATACCCATACCCACCCGT+AGG | - | Chr3:93866851-93866870 | None:intergenic | 60.0% | |
CCTACGGGTGGGTATGGGTA+TGG | + | Chr3:93866848-93866867 | MsG0380017238.01.T01:CDS | 60.0% | |
CGCACCACTCGAATCCCTAG+AGG | + | Chr3:93866031-93866050 | MsG0380017238.01.T01:CDS | 60.0% | |
CTCATAGGCCGAGGGGGTTT+GGG | + | Chr3:93866543-93866562 | MsG0380017238.01.T01:CDS | 60.0% | |
GGGTATGGGTATGGGGGGAA+TGG | + | Chr3:93866857-93866876 | MsG0380017238.01.T01:CDS | 60.0% | |
GGTACCCTACGGGTGGGTAT+GGG | + | Chr3:93866843-93866862 | MsG0380017238.01.T01:CDS | 60.0% | |
GGTTGTTGGTACCCTACGGG+TGG | + | Chr3:93866836-93866855 | MsG0380017238.01.T01:CDS | 60.0% | |
TAAGAGGGCAGTTCCGAGGG+AGG | + | Chr3:93866649-93866668 | MsG0380017238.01.T01:CDS | 60.0% | |
TGGTACCCTACGGGTGGGTA+TGG | + | Chr3:93866842-93866861 | MsG0380017238.01.T01:CDS | 60.0% | |
AGAGGGCAGTTCCGAGGGAG+GGG | + | Chr3:93866651-93866670 | MsG0380017238.01.T01:CDS | 65.0% | |
CGGGTGGGTATGGGTATGGG+GGG | + | Chr3:93866852-93866871 | MsG0380017238.01.T01:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 93865781 | 93867441 | 93865781 | ID=MsG0380017238.01;Name=MsG0380017238.01 |
Chr3 | mRNA | 93865781 | 93867441 | 93865781 | ID=MsG0380017238.01.T01;Parent=MsG0380017238.01;Name=MsG0380017238.01.T01;_AED=0.22;_eAED=0.22;_QI=106|1|1|1|1|1|2|243|375 |
Chr3 | exon | 93865781 | 93866132 | 93865781 | ID=MsG0380017238.01.T01:exon:1460;Parent=MsG0380017238.01.T01 |
Chr3 | exon | 93866317 | 93867441 | 93866317 | ID=MsG0380017238.01.T01:exon:1461;Parent=MsG0380017238.01.T01 |
Chr3 | five_prime_UTR | 93865781 | 93865886 | 93865781 | ID=MsG0380017238.01.T01:five_prime_utr;Parent=MsG0380017238.01.T01 |
Chr3 | CDS | 93865887 | 93866132 | 93865887 | ID=MsG0380017238.01.T01:cds;Parent=MsG0380017238.01.T01 |
Chr3 | CDS | 93866317 | 93867198 | 93866317 | ID=MsG0380017238.01.T01:cds;Parent=MsG0380017238.01.T01 |
Chr3 | three_prime_UTR | 93867199 | 93867441 | 93867199 | ID=MsG0380017238.01.T01:three_prime_utr;Parent=MsG0380017238.01.T01 |
Gene Sequence |
Protein sequence |