AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0430640


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0430640 MtrunA17_Chr3g0134551 99.233 391 2 1 1 391 1 390 0.0 806
Msa0430640 MtrunA17_Chr3g0082001 98.977 391 3 1 1 391 1 390 0.0 805
Msa0430640 MtrunA17_Chr3g0134561 83.632 391 63 1 1 391 1 390 0.0 704
Msa0430640 MtrunA17_Chr3g0134571 81.698 377 68 1 15 391 3 378 0.0 655
Msa0430640 MtrunA17_Chr1g0152831 72.751 389 105 1 1 389 34 421 0.0 603
Msa0430640 MtrunA17_Chr1g0152811 69.821 391 115 2 1 391 38 425 0.0 574
Msa0430640 MtrunA17_Chr1g0152791 71.014 207 59 1 185 391 2 207 2.82e-107 314
Msa0430640 MtrunA17_Chr4g0036961 43.351 376 194 9 27 391 5 372 9.47e-98 296
Msa0430640 MtrunA17_Chr4g0068121 42.593 378 190 9 29 391 7 372 4.43e-96 291
Msa0430640 MtrunA17_Chr4g0068141 41.799 378 193 9 29 391 7 372 1.44e-95 290
Msa0430640 MtrunA17_Chr3g0104611 41.602 387 197 13 21 391 4 377 6.19e-88 271
Msa0430640 MtrunA17_Chr1g0152801 64.000 125 45 0 69 193 10 134 4.84e-53 172
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0430640 AT4G24220.1 71.355 391 109 3 1 391 1 388 0.0 595
Msa0430640 AT4G24220.2 71.100 391 109 3 1 391 1 387 0.0 593
Msa0430640 AT5G58750.2 39.370 381 204 15 27 391 8 377 9.08e-75 237
Msa0430640 AT5G58750.1 39.370 381 204 15 27 391 16 385 1.40e-74 237

Find 130 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCGCCGTCCACGACCTTCT+TGG 0.232378 3_2:-82547838 Msa0430640:CDS
TGATTGCAGAGCAACATATT+TGG 0.240104 3_2:-82547259 Msa0430640:CDS
CATAGACCACTTCTCATCTT+TGG 0.251994 3_2:-82547422 Msa0430640:CDS
CAATTTGGGATTGAGGAGTA+TGG 0.252856 3_2:-82547143 Msa0430640:CDS
CGCTTATCAATTGGATTGAT+AGG 0.266346 3_2:-82546899 Msa0430640:CDS
GGCGGTAGATGGAAGGTTTA+TGG 0.274823 3_2:-82547866 Msa0430640:CDS
TTGTGTTAAGCATGTGTATT+TGG 0.282705 3_2:+82548223 None:intergenic
TGGGTTAACTATGCTGGTTT+AGG 0.327901 3_2:-82546530 Msa0430640:three_prime_UTR
CTAAGAATTCGCTTATCAAT+TGG 0.335150 3_2:-82546908 Msa0430640:CDS
GGTGTTCCGTTGAGATTTCC+AGG 0.337111 3_2:-82547329 Msa0430640:CDS
GCTACGTTCTGGAAGCTTCT+TGG 0.337550 3_2:+82547959 None:intergenic
TGGTGGTGGTCTGGTGCTAT+TGG 0.337632 3_2:-82548120 Msa0430640:CDS
CATAATGCTTGCCGCCGGTT+TGG 0.342780 3_2:+82547597 None:intergenic
TGGTTTGCAGATGCTTGTTT+TGG 0.344545 3_2:-82546996 Msa0430640:CDS
ATCGGTGAGGACGGAGAGTT+TGG 0.345552 3_2:+82547754 None:intergenic
GTTGGGCCCTTTGAGTCTTT+CGG 0.351274 3_2:-82547575 Msa0430640:CDS
AGTTTGGTGGTGGCGTCGTT+TGG 0.353505 3_2:+82547770 None:intergenic
TGTGAAGGAGAATGGGTTGC+AGG 0.353550 3_2:-82547048 Msa0430640:CDS
AGGTTATCGCGGAACAATTT+GGG 0.354578 3_2:-82547157 Msa0430640:CDS
TGGCGGAGATTCGGAGCGTT+TGG 0.356685 3_2:+82547629 None:intergenic
CACAGAGGATATGCCGCGTT+TGG 0.358706 3_2:-82547525 Msa0430640:CDS
GATTGCAGAGCAACATATTT+GGG 0.360846 3_2:-82547258 Msa0430640:CDS
TACTTTGCAGCAGAAGAAAC+TGG 0.363069 3_2:-82547996 Msa0430640:intron
AAGGTTATCGCGGAACAATT+TGG 0.372868 3_2:-82547158 Msa0430640:CDS
AATGCTTCATTCTTAGCATA+AGG 0.374853 3_2:+82547224 None:intergenic
TACTAATAATGTTGTTGTAC+TGG 0.376077 3_2:-82546694 Msa0430640:three_prime_UTR
GCTTTAGTCGTTGGCGTAAC+CGG 0.384069 3_2:-82547938 Msa0430640:CDS
TGAAGGATAAGGGTCCTGTT+TGG 0.400714 3_2:-82547079 Msa0430640:CDS
GAAATAAGAAAGTGACAAGT+AGG 0.402102 3_2:+82548181 None:intergenic
CAGACACACCAGGCGGTAGA+TGG 0.403455 3_2:-82547877 Msa0430640:CDS
CTAGTTCCATTACATTAGAA+TGG 0.413783 3_2:-82546630 Msa0430640:three_prime_UTR
TTTATTTGGGTTAACTATGC+TGG 0.423780 3_2:-82546536 Msa0430640:three_prime_UTR
TAGTTCCATTACATTAGAAT+GGG 0.423923 3_2:-82546629 Msa0430640:three_prime_UTR
CGCGGAACAATTTGGGATTG+AGG 0.428110 3_2:-82547150 Msa0430640:CDS
GGCGGAGATTCGGAGCGTTT+GGG 0.432770 3_2:+82547630 None:intergenic
TTCCAGGGACTAAGTTAGCT+TGG 0.433800 3_2:-82547313 Msa0430640:CDS
TCCAGGGACTAAGTTAGCTT+GGG 0.436133 3_2:-82547312 Msa0430640:CDS
TTCACAATCTCATCCCAAAC+AGG 0.445292 3_2:+82547065 None:intergenic
AGGTCCTCGTTTGAAGTTAA+CGG 0.445908 3_2:-82547108 Msa0430640:CDS
ACTATGAGCTGGTGGTGGTC+TGG 0.446263 3_2:-82548129 Msa0430640:CDS
ATTGAGACATGGCGGAGATT+CGG 0.455047 3_2:+82547620 None:intergenic
CCTCTGTGTATGGTGGTTCA+TGG 0.459034 3_2:+82547540 None:intergenic
CACATGTCTTCTACGTCTGT+TGG 0.460960 3_2:-82547727 Msa0430640:CDS
ACATGTCTTCTACGTCTGTT+GGG 0.463524 3_2:-82547726 Msa0430640:CDS
AACGGAGTTGATGAAGGATA+AGG 0.464931 3_2:-82547090 Msa0430640:CDS
GAAGGATAAGGGTCCTGTTT+GGG 0.466201 3_2:-82547078 Msa0430640:CDS
CGCCGGTTTGGATTGAGACA+TGG 0.468188 3_2:+82547609 None:intergenic
TCACATTGGATGTATTCTAC+AGG 0.469825 3_2:+82547803 None:intergenic
CGCGGCATATCCTCTGTGTA+TGG 0.472110 3_2:+82547530 None:intergenic
ACCGGCGGCAAGCATTATGT+TGG 0.479546 3_2:-82547593 Msa0430640:CDS
TACAGTATGATGAATATCAT+TGG 0.480772 3_2:-82547389 Msa0430640:CDS
TGAACCCCATTCTAATGTAA+TGG 0.485889 3_2:+82546624 None:intergenic
CGCTGCAATTTGTAAGCATG+AGG 0.489083 3_2:-82547351 Msa0430640:CDS
ATGATATTCATCATACTGTA+AGG 0.490885 3_2:+82547392 None:intergenic
CGCCATGTCTCAATCCAAAC+CGG 0.492347 3_2:-82547611 Msa0430640:CDS
GAAGTTAACGGAGTTGATGA+AGG 0.493606 3_2:-82547096 Msa0430640:CDS
CCAAGAAGGTCGTGGACGGC+GGG 0.494278 3_2:+82547838 None:intergenic
CTCAGCAACTTCTTCCAGCT+TGG 0.494428 3_2:+82547022 None:intergenic
TGGTGCTATTGGTGCTGCCA+AGG 0.502349 3_2:-82548109 Msa0430640:intron
CCGGCGGCAAGCATTATGTT+GGG 0.504932 3_2:-82547592 Msa0430640:CDS
AATTTGGGATTGAGGAGTAT+GGG 0.506197 3_2:-82547142 Msa0430640:CDS
GATGAGATTGTGAAGGAGAA+TGG 0.506930 3_2:-82547056 Msa0430640:CDS
GAGGCTGTTGCCGACGATGC+CGG 0.508074 3_2:+82547919 None:intergenic
AGGCACAATCTTGTAAGCTC+TGG 0.514865 3_2:+82546875 None:intergenic
TGGGTTGCAGGTTACCAAGC+TGG 0.516759 3_2:-82547036 Msa0430640:CDS
CAGAACGTAGCTTTAGTCGT+TGG 0.524219 3_2:-82547947 Msa0430640:CDS
AATTGCAGCGTAAACACAAA+TGG 0.531807 3_2:+82547364 None:intergenic
TCCCAAGCTAACTTAGTCCC+TGG 0.532880 3_2:+82547311 None:intergenic
TCCAAGAAGGTCGTGGACGG+CGG 0.533828 3_2:+82547837 None:intergenic
GAAGAAACAGGGAAGAAAGA+AGG 0.534377 3_2:-82547461 Msa0430640:CDS
GATCTTGCCGAAAGACTCAA+AGG 0.535462 3_2:+82547568 None:intergenic
ATGAACAAGTCGAAAGAGCA+TGG 0.537267 3_2:-82546951 Msa0430640:CDS
TAGGTGGAAGCAATTGTGGA+AGG 0.541878 3_2:-82547177 Msa0430640:CDS
ACGGAGTTGATGAAGGATAA+GGG 0.545911 3_2:-82547089 Msa0430640:CDS
CCCAACATAATGCTTGCCGC+CGG 0.546768 3_2:+82547592 None:intergenic
GGTGGTGGCGTCGTTTGGAT+CGG 0.550033 3_2:+82547775 None:intergenic
ATGAGATTGTGAAGGAGAAT+GGG 0.554010 3_2:-82547055 Msa0430640:CDS
TCTGAATCTCAACTATGAGC+TGG 0.557759 3_2:-82548140 Msa0430640:exon
GCAACATATTTGGGCTGCAG+TGG 0.558473 3_2:-82547249 Msa0430640:CDS
AGCTTGGGAGAATTACTACA+TGG 0.558994 3_2:-82547297 Msa0430640:CDS
TAAACCTTCCATCTACCGCC+TGG 0.566038 3_2:+82547869 None:intergenic
ACTAATAATGTTGTTGTACT+GGG 0.569247 3_2:-82546693 Msa0430640:three_prime_UTR
CAACGACTAAAGCTACGTTC+TGG 0.570536 3_2:+82547948 None:intergenic
AAAGTAGAACGATACTAAGT+CGG 0.570557 3_2:+82546827 None:intergenic
GGTGAGGACGGAGAGTTTGG+TGG 0.571288 3_2:+82547757 None:intergenic
GAGTATGGGTTCGACGAGGA+AGG 0.571764 3_2:-82547128 Msa0430640:CDS
GAAGCATTCAACTGTAGCAA+TGG 0.576833 3_2:-82547209 Msa0430640:CDS
CGTTCCAAGAAGGTCGTGGA+CGG 0.577568 3_2:+82547834 None:intergenic
CACATTGGATGTATTCTACA+GGG 0.581072 3_2:+82547804 None:intergenic
GGGTGATCTGCGTTCCAAGA+AGG 0.581217 3_2:+82547824 None:intergenic
GAAAATCCAAAGATGAGAAG+TGG 0.581784 3_2:+82547416 None:intergenic
GGAAGAAAGAAGGTGTGAGT+TGG 0.582552 3_2:-82547451 Msa0430640:CDS
GAGGACGGAGAGTTTGGTGG+TGG 0.585930 3_2:+82547760 None:intergenic
TCTAGAATAAGTAAGATTCG+AGG 0.585976 3_2:-82546779 Msa0430640:three_prime_UTR
CTAGAATAAGTAAGATTCGA+GGG 0.586889 3_2:-82546778 Msa0430640:three_prime_UTR
ATGTGTGACATCGGTGAGGA+CGG 0.593339 3_2:+82547745 None:intergenic
ATCTTGCCGAAAGACTCAAA+GGG 0.602975 3_2:+82547569 None:intergenic
CCGCCTGGTGTGTCTGCTAG+AGG 0.604279 3_2:+82547884 None:intergenic
TCTGCGTTCCAAGAAGGTCG+TGG 0.605244 3_2:+82547830 None:intergenic
AAATAAGAAAGTGACAAGTA+GGG 0.606029 3_2:+82548182 None:intergenic
GTTGGCGTAACCGGCATCGT+CGG 0.606475 3_2:-82547929 Msa0430640:CDS
TCTCAACTATGAGCTGGTGG+TGG 0.607226 3_2:-82548134 Msa0430640:exon
GGCATATCCTCTGTGTATGG+TGG 0.613508 3_2:+82547533 None:intergenic
GTGTTCCGTTGAGATTTCCA+GGG 0.614181 3_2:-82547328 Msa0430640:CDS
TTACCTCTAGCAGACACACC+AGG 0.617707 3_2:-82547887 Msa0430640:CDS
TTAGTCCCTGGAAATCTCAA+CGG 0.621975 3_2:+82547323 None:intergenic
CACACCAGGCGGTAGATGGA+AGG 0.626092 3_2:-82547873 Msa0430640:CDS
TGAACAAGTCGAAAGAGCAT+GGG 0.628727 3_2:-82546950 Msa0430640:CDS
AGTTCCATTACATTAGAATG+GGG 0.629086 3_2:-82546628 Msa0430640:three_prime_UTR
ATTCGATATTCACTCACTCA+AGG 0.633093 3_2:+82546855 None:intergenic
GAATCTCAACTATGAGCTGG+TGG 0.639383 3_2:-82548137 Msa0430640:exon
TGGAAGAAGTTGCTGAGTGG+TGG 0.642132 3_2:-82547016 Msa0430640:CDS
GCAGAAAACTGTGAAATGAA+CGG 0.646850 3_2:-82547686 Msa0430640:CDS
GCTGCAATTTGTAAGCATGA+GGG 0.652717 3_2:-82547350 Msa0430640:CDS
GTAGAAGACATGTGTGACAT+CGG 0.655764 3_2:+82547736 None:intergenic
TTGGATCGGTGATGTCACAT+TGG 0.663773 3_2:+82547789 None:intergenic
GCAATTGTGGAAGGTTATCG+CGG 0.668471 3_2:-82547168 Msa0430640:CDS
CATGTCTCAATCCAAACCGG+CGG 0.688004 3_2:-82547608 Msa0430640:CDS
TGTTTGGGATGAGATTGTGA+AGG 0.709911 3_2:-82547063 Msa0430640:CDS
AACTCCGTTAACTTCAAACG+AGG 0.714416 3_2:+82547104 None:intergenic
CGGTTTGGATTGAGACATGG+CGG 0.724287 3_2:+82547612 None:intergenic
AGACATGTGTGACATCGGTG+AGG 0.731634 3_2:+82547741 None:intergenic
GTAATGGAACTAGATAGCTG+AGG 0.734207 3_2:+82546640 None:intergenic
AAATTATGATAATCCAAACG+CGG 0.735231 3_2:+82547512 None:intergenic
AGCTGGAAGAAGTTGCTGAG+TGG 0.740024 3_2:-82547019 Msa0430640:CDS
TGAGGAGTATGGGTTCGACG+AGG 0.754785 3_2:-82547132 Msa0430640:CDS
CCTCTAGCAGACACACCAGG+CGG 0.761004 3_2:-82547884 Msa0430640:CDS
CGTTTGGGATAACTGCAGTG+AGG 0.764252 3_2:+82547645 None:intergenic
CCATGAACCACCATACACAG+AGG 0.767776 3_2:-82547540 Msa0430640:CDS
CTAGAGGTAAAATTTCAGCG+AGG 0.788343 3_2:+82547900 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATATACATATAGATTT+GGG + chr3_2:82546522-82546541 None:intergenic 10.0%
!! TAAAAACTTGTAAATTTATT+TGG - chr3_2:82548217-82548236 Msa0430640:five_prime_UTR 10.0%
!! AAAAACTTGTAAATTTATTT+GGG - chr3_2:82548218-82548237 Msa0430640:five_prime_UTR 10.0%
!!! TTTTATATACATATAGATTT+GGG + chr3_2:82546522-82546541 None:intergenic 10.0%
!! TAAAAACTTGTAAATTTATT+TGG - chr3_2:82548217-82548236 Msa0430640:five_prime_UTR 10.0%
!! AAAAACTTGTAAATTTATTT+GGG - chr3_2:82548218-82548237 Msa0430640:five_prime_UTR 10.0%
!!! GTTTTATATACATATAGATT+TGG + chr3_2:82546523-82546542 None:intergenic 15.0%
!! CATTATCAATAATTAAAACT+AGG + chr3_2:82546739-82546758 None:intergenic 15.0%
!!! GTTTTATATACATATAGATT+TGG + chr3_2:82546523-82546542 None:intergenic 15.0%
!! CATTATCAATAATTAAAACT+AGG + chr3_2:82546739-82546758 None:intergenic 15.0%
! AAATAAGAAAGTGACAAGTA+GGG + chr3_2:82546588-82546607 None:intergenic 25.0%
! GAAATTAAGATAGTATACCT+TGG + chr3_2:82546678-82546697 None:intergenic 25.0%
! AAAAGAAGAAGAAGAAGAAA+GGG + chr3_2:82546700-82546719 None:intergenic 25.0%
! AAAAAGAAGAAGAAGAAGAA+AGG + chr3_2:82546701-82546720 None:intergenic 25.0%
! AAATTATGATAATCCAAACG+CGG + chr3_2:82547258-82547277 None:intergenic 25.0%
!!! ATGTTTTGTTTGAAGAAACA+GGG - chr3_2:82547295-82547314 Msa0430640:CDS 25.0%
! ATGATATTCATCATACTGTA+AGG + chr3_2:82547378-82547397 None:intergenic 25.0%
! TACAGTATGATGAATATCAT+TGG - chr3_2:82547378-82547397 Msa0430640:CDS 25.0%
! TACTAATAATGTTGTTGTAC+TGG - chr3_2:82548073-82548092 Msa0430640:intron 25.0%
! ACTAATAATGTTGTTGTACT+GGG - chr3_2:82548074-82548093 Msa0430640:intron 25.0%
! TAGTTCCATTACATTAGAAT+GGG - chr3_2:82548138-82548157 Msa0430640:exon 25.0%
! AAATAAGAAAGTGACAAGTA+GGG + chr3_2:82546588-82546607 None:intergenic 25.0%
! GAAATTAAGATAGTATACCT+TGG + chr3_2:82546678-82546697 None:intergenic 25.0%
! AAAAGAAGAAGAAGAAGAAA+GGG + chr3_2:82546700-82546719 None:intergenic 25.0%
! AAAAAGAAGAAGAAGAAGAA+AGG + chr3_2:82546701-82546720 None:intergenic 25.0%
! AAATTATGATAATCCAAACG+CGG + chr3_2:82547258-82547277 None:intergenic 25.0%
!!! ATGTTTTGTTTGAAGAAACA+GGG - chr3_2:82547295-82547314 Msa0430640:CDS 25.0%
! ATGATATTCATCATACTGTA+AGG + chr3_2:82547378-82547397 None:intergenic 25.0%
! TACAGTATGATGAATATCAT+TGG - chr3_2:82547378-82547397 Msa0430640:CDS 25.0%
! TACTAATAATGTTGTTGTAC+TGG - chr3_2:82548073-82548092 Msa0430640:intron 25.0%
! ACTAATAATGTTGTTGTACT+GGG - chr3_2:82548074-82548093 Msa0430640:intron 25.0%
! TAGTTCCATTACATTAGAAT+GGG - chr3_2:82548138-82548157 Msa0430640:exon 25.0%
TTGTGTTAAGCATGTGTATT+TGG + chr3_2:82546547-82546566 None:intergenic 30.0%
GAAATAAGAAAGTGACAAGT+AGG + chr3_2:82546589-82546608 None:intergenic 30.0%
!!! GATGTTTTGTTTGAAGAAAC+AGG - chr3_2:82547294-82547313 Msa0430640:CDS 30.0%
AATGCTTCATTCTTAGCATA+AGG + chr3_2:82547546-82547565 None:intergenic 30.0%
CTAAGAATTCGCTTATCAAT+TGG - chr3_2:82547859-82547878 Msa0430640:CDS 30.0%
AAAGTAGAACGATACTAAGT+CGG + chr3_2:82547943-82547962 None:intergenic 30.0%
! TCTAGAATAAGTAAGATTCG+AGG - chr3_2:82547988-82548007 Msa0430640:CDS 30.0%
CTAGAATAAGTAAGATTCGA+GGG - chr3_2:82547989-82548008 Msa0430640:CDS 30.0%
CTAGTTCCATTACATTAGAA+TGG - chr3_2:82548137-82548156 Msa0430640:exon 30.0%
AGTTCCATTACATTAGAATG+GGG - chr3_2:82548139-82548158 Msa0430640:exon 30.0%
! TTTATTTGGGTTAACTATGC+TGG - chr3_2:82548231-82548250 Msa0430640:five_prime_UTR 30.0%
TACATATAGATTTGGGTAGA+TGG + chr3_2:82546515-82546534 None:intergenic 30.0%
TTGTGTTAAGCATGTGTATT+TGG + chr3_2:82546547-82546566 None:intergenic 30.0%
GAAATAAGAAAGTGACAAGT+AGG + chr3_2:82546589-82546608 None:intergenic 30.0%
!!! GATGTTTTGTTTGAAGAAAC+AGG - chr3_2:82547294-82547313 Msa0430640:CDS 30.0%
AATGCTTCATTCTTAGCATA+AGG + chr3_2:82547546-82547565 None:intergenic 30.0%
CTAAGAATTCGCTTATCAAT+TGG - chr3_2:82547859-82547878 Msa0430640:CDS 30.0%
AAAGTAGAACGATACTAAGT+CGG + chr3_2:82547943-82547962 None:intergenic 30.0%
! TCTAGAATAAGTAAGATTCG+AGG - chr3_2:82547988-82548007 Msa0430640:CDS 30.0%
CTAGAATAAGTAAGATTCGA+GGG - chr3_2:82547989-82548008 Msa0430640:CDS 30.0%
CTAGTTCCATTACATTAGAA+TGG - chr3_2:82548137-82548156 Msa0430640:exon 30.0%
AGTTCCATTACATTAGAATG+GGG - chr3_2:82548139-82548158 Msa0430640:exon 30.0%
! TTTATTTGGGTTAACTATGC+TGG - chr3_2:82548231-82548250 Msa0430640:five_prime_UTR 30.0%
CACATTGGATGTATTCTACA+GGG + chr3_2:82546966-82546985 None:intergenic 35.0%
TCACATTGGATGTATTCTAC+AGG + chr3_2:82546967-82546986 None:intergenic 35.0%
! CATTTCACAGTTTTCTGCTT+CGG + chr3_2:82547079-82547098 None:intergenic 35.0%
GCAGAAAACTGTGAAATGAA+CGG - chr3_2:82547081-82547100 Msa0430640:CDS 35.0%
GAAAATCCAAAGATGAGAAG+TGG + chr3_2:82547354-82547373 None:intergenic 35.0%
AATTGCAGCGTAAACACAAA+TGG + chr3_2:82547406-82547425 None:intergenic 35.0%
TGATTGCAGAGCAACATATT+TGG - chr3_2:82547508-82547527 Msa0430640:CDS 35.0%
GATTGCAGAGCAACATATTT+GGG - chr3_2:82547509-82547528 Msa0430640:CDS 35.0%
!! GTAGCAATGGTGATGTTTTT+AGG - chr3_2:82547571-82547590 Msa0430640:CDS 35.0%
!!! TTTTTAGGTGGAAGCAATTG+TGG - chr3_2:82547586-82547605 Msa0430640:CDS 35.0%
! AATTTGGGATTGAGGAGTAT+GGG - chr3_2:82547625-82547644 Msa0430640:CDS 35.0%
ATGAGATTGTGAAGGAGAAT+GGG - chr3_2:82547712-82547731 Msa0430640:CDS 35.0%
!!! ATGCTTGTTTTGGAGGTAAT+GGG - chr3_2:82547781-82547800 Msa0430640:CDS 35.0%
!!! TTTTGGAGGTAATGGGTTTA+CGG - chr3_2:82547788-82547807 Msa0430640:CDS 35.0%
CGCTTATCAATTGGATTGAT+AGG - chr3_2:82547868-82547887 Msa0430640:CDS 35.0%
ATTCGATATTCACTCACTCA+AGG + chr3_2:82547915-82547934 None:intergenic 35.0%
TGAACCCCATTCTAATGTAA+TGG + chr3_2:82548146-82548165 None:intergenic 35.0%
CACATTGGATGTATTCTACA+GGG + chr3_2:82546966-82546985 None:intergenic 35.0%
TCACATTGGATGTATTCTAC+AGG + chr3_2:82546967-82546986 None:intergenic 35.0%
! CATTTCACAGTTTTCTGCTT+CGG + chr3_2:82547079-82547098 None:intergenic 35.0%
GCAGAAAACTGTGAAATGAA+CGG - chr3_2:82547081-82547100 Msa0430640:CDS 35.0%
GAAAATCCAAAGATGAGAAG+TGG + chr3_2:82547354-82547373 None:intergenic 35.0%
AATTGCAGCGTAAACACAAA+TGG + chr3_2:82547406-82547425 None:intergenic 35.0%
TGATTGCAGAGCAACATATT+TGG - chr3_2:82547508-82547527 Msa0430640:CDS 35.0%
GATTGCAGAGCAACATATTT+GGG - chr3_2:82547509-82547528 Msa0430640:CDS 35.0%
!! GTAGCAATGGTGATGTTTTT+AGG - chr3_2:82547571-82547590 Msa0430640:CDS 35.0%
!!! TTTTTAGGTGGAAGCAATTG+TGG - chr3_2:82547586-82547605 Msa0430640:CDS 35.0%
! AATTTGGGATTGAGGAGTAT+GGG - chr3_2:82547625-82547644 Msa0430640:CDS 35.0%
ATGAGATTGTGAAGGAGAAT+GGG - chr3_2:82547712-82547731 Msa0430640:CDS 35.0%
!!! ATGCTTGTTTTGGAGGTAAT+GGG - chr3_2:82547781-82547800 Msa0430640:CDS 35.0%
!!! TTTTGGAGGTAATGGGTTTA+CGG - chr3_2:82547788-82547807 Msa0430640:CDS 35.0%
CGCTTATCAATTGGATTGAT+AGG - chr3_2:82547868-82547887 Msa0430640:CDS 35.0%
ATTCGATATTCACTCACTCA+AGG + chr3_2:82547915-82547934 None:intergenic 35.0%
TGAACCCCATTCTAATGTAA+TGG + chr3_2:82548146-82548165 None:intergenic 35.0%
TCTGAATCTCAACTATGAGC+TGG - chr3_2:82546627-82546646 Msa0430640:three_prime_UTR 40.0%
TACTTTGCAGCAGAAGAAAC+TGG - chr3_2:82546771-82546790 Msa0430640:three_prime_UTR 40.0%
CTAGAGGTAAAATTTCAGCG+AGG + chr3_2:82546870-82546889 None:intergenic 40.0%
GTAGAAGACATGTGTGACAT+CGG + chr3_2:82547034-82547053 None:intergenic 40.0%
ACATGTCTTCTACGTCTGTT+GGG - chr3_2:82547041-82547060 Msa0430640:CDS 40.0%
ATCTTGCCGAAAGACTCAAA+GGG + chr3_2:82547201-82547220 None:intergenic 40.0%
GAAGAAACAGGGAAGAAAGA+AGG - chr3_2:82547306-82547325 Msa0430640:CDS 40.0%
CATAGACCACTTCTCATCTT+TGG - chr3_2:82547345-82547364 Msa0430640:CDS 40.0%
GCTGCAATTTGTAAGCATGA+GGG - chr3_2:82547417-82547436 Msa0430640:CDS 40.0%
TTAGTCCCTGGAAATCTCAA+CGG + chr3_2:82547447-82547466 None:intergenic 40.0%
AGCTTGGGAGAATTACTACA+TGG - chr3_2:82547470-82547489 Msa0430640:CDS 40.0%
! GAAGCATTCAACTGTAGCAA+TGG - chr3_2:82547558-82547577 Msa0430640:CDS 40.0%
!!! GCAATGGTGATGTTTTTAGG+TGG - chr3_2:82547574-82547593 Msa0430640:CDS 40.0%
AAGGTTATCGCGGAACAATT+TGG - chr3_2:82547609-82547628 Msa0430640:CDS 40.0%
AGGTTATCGCGGAACAATTT+GGG - chr3_2:82547610-82547629 Msa0430640:CDS 40.0%
! CAATTTGGGATTGAGGAGTA+TGG - chr3_2:82547624-82547643 Msa0430640:CDS 40.0%
! AGGTCCTCGTTTGAAGTTAA+CGG - chr3_2:82547659-82547678 Msa0430640:CDS 40.0%
AACTCCGTTAACTTCAAACG+AGG + chr3_2:82547666-82547685 None:intergenic 40.0%
!! GAAGTTAACGGAGTTGATGA+AGG - chr3_2:82547671-82547690 Msa0430640:CDS 40.0%
!! AACGGAGTTGATGAAGGATA+AGG - chr3_2:82547677-82547696 Msa0430640:CDS 40.0%
!! ACGGAGTTGATGAAGGATAA+GGG - chr3_2:82547678-82547697 Msa0430640:CDS 40.0%
TTCACAATCTCATCCCAAAC+AGG + chr3_2:82547705-82547724 None:intergenic 40.0%
! TGTTTGGGATGAGATTGTGA+AGG - chr3_2:82547704-82547723 Msa0430640:CDS 40.0%
GATGAGATTGTGAAGGAGAA+TGG - chr3_2:82547711-82547730 Msa0430640:CDS 40.0%
!! TGGTTTGCAGATGCTTGTTT+TGG - chr3_2:82547771-82547790 Msa0430640:CDS 40.0%
!!! TTTGCAGATGCTTGTTTTGG+AGG - chr3_2:82547774-82547793 Msa0430640:CDS 40.0%
!!! GATGCTTGTTTTGGAGGTAA+TGG - chr3_2:82547780-82547799 Msa0430640:CDS 40.0%
ATGAACAAGTCGAAAGAGCA+TGG - chr3_2:82547816-82547835 Msa0430640:CDS 40.0%
! TGAACAAGTCGAAAGAGCAT+GGG - chr3_2:82547817-82547836 Msa0430640:CDS 40.0%
!! TCGAAAGAGCATGGGTTTTT+GGG - chr3_2:82547825-82547844 Msa0430640:CDS 40.0%
! GTAATGGAACTAGATAGCTG+AGG + chr3_2:82548130-82548149 None:intergenic 40.0%
!! TGGGTTAACTATGCTGGTTT+AGG - chr3_2:82548237-82548256 Msa0430640:five_prime_UTR 40.0%
TCTGAATCTCAACTATGAGC+TGG - chr3_2:82546627-82546646 Msa0430640:three_prime_UTR 40.0%
TACTTTGCAGCAGAAGAAAC+TGG - chr3_2:82546771-82546790 Msa0430640:three_prime_UTR 40.0%
CTAGAGGTAAAATTTCAGCG+AGG + chr3_2:82546870-82546889 None:intergenic 40.0%
GTAGAAGACATGTGTGACAT+CGG + chr3_2:82547034-82547053 None:intergenic 40.0%
ACATGTCTTCTACGTCTGTT+GGG - chr3_2:82547041-82547060 Msa0430640:CDS 40.0%
ATCTTGCCGAAAGACTCAAA+GGG + chr3_2:82547201-82547220 None:intergenic 40.0%
GAAGAAACAGGGAAGAAAGA+AGG - chr3_2:82547306-82547325 Msa0430640:CDS 40.0%
CATAGACCACTTCTCATCTT+TGG - chr3_2:82547345-82547364 Msa0430640:CDS 40.0%
GCTGCAATTTGTAAGCATGA+GGG - chr3_2:82547417-82547436 Msa0430640:CDS 40.0%
TTAGTCCCTGGAAATCTCAA+CGG + chr3_2:82547447-82547466 None:intergenic 40.0%
AGCTTGGGAGAATTACTACA+TGG - chr3_2:82547470-82547489 Msa0430640:CDS 40.0%
! GAAGCATTCAACTGTAGCAA+TGG - chr3_2:82547558-82547577 Msa0430640:CDS 40.0%
!!! GCAATGGTGATGTTTTTAGG+TGG - chr3_2:82547574-82547593 Msa0430640:CDS 40.0%
AAGGTTATCGCGGAACAATT+TGG - chr3_2:82547609-82547628 Msa0430640:CDS 40.0%
AGGTTATCGCGGAACAATTT+GGG - chr3_2:82547610-82547629 Msa0430640:CDS 40.0%
! CAATTTGGGATTGAGGAGTA+TGG - chr3_2:82547624-82547643 Msa0430640:CDS 40.0%
! AGGTCCTCGTTTGAAGTTAA+CGG - chr3_2:82547659-82547678 Msa0430640:CDS 40.0%
AACTCCGTTAACTTCAAACG+AGG + chr3_2:82547666-82547685 None:intergenic 40.0%
!! GAAGTTAACGGAGTTGATGA+AGG - chr3_2:82547671-82547690 Msa0430640:CDS 40.0%
!! AACGGAGTTGATGAAGGATA+AGG - chr3_2:82547677-82547696 Msa0430640:CDS 40.0%
!! ACGGAGTTGATGAAGGATAA+GGG - chr3_2:82547678-82547697 Msa0430640:CDS 40.0%
TTCACAATCTCATCCCAAAC+AGG + chr3_2:82547705-82547724 None:intergenic 40.0%
! TGTTTGGGATGAGATTGTGA+AGG - chr3_2:82547704-82547723 Msa0430640:CDS 40.0%
GATGAGATTGTGAAGGAGAA+TGG - chr3_2:82547711-82547730 Msa0430640:CDS 40.0%
!! TGGTTTGCAGATGCTTGTTT+TGG - chr3_2:82547771-82547790 Msa0430640:CDS 40.0%
!!! TTTGCAGATGCTTGTTTTGG+AGG - chr3_2:82547774-82547793 Msa0430640:CDS 40.0%
!!! GATGCTTGTTTTGGAGGTAA+TGG - chr3_2:82547780-82547799 Msa0430640:CDS 40.0%
ATGAACAAGTCGAAAGAGCA+TGG - chr3_2:82547816-82547835 Msa0430640:CDS 40.0%
! TGAACAAGTCGAAAGAGCAT+GGG - chr3_2:82547817-82547836 Msa0430640:CDS 40.0%
!! TCGAAAGAGCATGGGTTTTT+GGG - chr3_2:82547825-82547844 Msa0430640:CDS 40.0%
! GTAATGGAACTAGATAGCTG+AGG + chr3_2:82548130-82548149 None:intergenic 40.0%
!! TGGGTTAACTATGCTGGTTT+AGG - chr3_2:82548237-82548256 Msa0430640:five_prime_UTR 40.0%
GAATCTCAACTATGAGCTGG+TGG - chr3_2:82546630-82546649 Msa0430640:three_prime_UTR 45.0%
CAACGACTAAAGCTACGTTC+TGG + chr3_2:82546822-82546841 None:intergenic 45.0%
!! CAGAACGTAGCTTTAGTCGT+TGG - chr3_2:82546820-82546839 Msa0430640:three_prime_UTR 45.0%
TTGGATCGGTGATGTCACAT+TGG + chr3_2:82546981-82547000 None:intergenic 45.0%
CACATGTCTTCTACGTCTGT+TGG - chr3_2:82547040-82547059 Msa0430640:CDS 45.0%
! TCACAGTTTTCTGCTTCGGT+GGG + chr3_2:82547075-82547094 None:intergenic 45.0%
! TTCACAGTTTTCTGCTTCGG+TGG + chr3_2:82547076-82547095 None:intergenic 45.0%
! ATTGAGACATGGCGGAGATT+CGG + chr3_2:82547150-82547169 None:intergenic 45.0%
GATCTTGCCGAAAGACTCAA+AGG + chr3_2:82547202-82547221 None:intergenic 45.0%
! GGAAGAAAGAAGGTGTGAGT+TGG - chr3_2:82547316-82547335 Msa0430640:CDS 45.0%
CGCTGCAATTTGTAAGCATG+AGG - chr3_2:82547416-82547435 Msa0430640:CDS 45.0%
GTGTTCCGTTGAGATTTCCA+GGG - chr3_2:82547439-82547458 Msa0430640:CDS 45.0%
TTCCAGGGACTAAGTTAGCT+TGG - chr3_2:82547454-82547473 Msa0430640:CDS 45.0%
! TCCAGGGACTAAGTTAGCTT+GGG - chr3_2:82547455-82547474 Msa0430640:CDS 45.0%
TAGGTGGAAGCAATTGTGGA+AGG - chr3_2:82547590-82547609 Msa0430640:CDS 45.0%
GCAATTGTGGAAGGTTATCG+CGG - chr3_2:82547599-82547618 Msa0430640:CDS 45.0%
TGAAGGATAAGGGTCCTGTT+TGG - chr3_2:82547688-82547707 Msa0430640:CDS 45.0%
GAAGGATAAGGGTCCTGTTT+GGG - chr3_2:82547689-82547708 Msa0430640:CDS 45.0%
!! GTCGAAAGAGCATGGGTTTT+TGG - chr3_2:82547824-82547843 Msa0430640:CDS 45.0%
!!! AGCATGGGTTTTTGGGATTC+AGG - chr3_2:82547832-82547851 Msa0430640:CDS 45.0%
AGGCACAATCTTGTAAGCTC+TGG + chr3_2:82547895-82547914 None:intergenic 45.0%
GAATCTCAACTATGAGCTGG+TGG - chr3_2:82546630-82546649 Msa0430640:three_prime_UTR 45.0%
CAACGACTAAAGCTACGTTC+TGG + chr3_2:82546822-82546841 None:intergenic 45.0%
!! CAGAACGTAGCTTTAGTCGT+TGG - chr3_2:82546820-82546839 Msa0430640:three_prime_UTR 45.0%
TTGGATCGGTGATGTCACAT+TGG + chr3_2:82546981-82547000 None:intergenic 45.0%
CACATGTCTTCTACGTCTGT+TGG - chr3_2:82547040-82547059 Msa0430640:CDS 45.0%
! TCACAGTTTTCTGCTTCGGT+GGG + chr3_2:82547075-82547094 None:intergenic 45.0%
! TTCACAGTTTTCTGCTTCGG+TGG + chr3_2:82547076-82547095 None:intergenic 45.0%
! ATTGAGACATGGCGGAGATT+CGG + chr3_2:82547150-82547169 None:intergenic 45.0%
GATCTTGCCGAAAGACTCAA+AGG + chr3_2:82547202-82547221 None:intergenic 45.0%
! GGAAGAAAGAAGGTGTGAGT+TGG - chr3_2:82547316-82547335 Msa0430640:CDS 45.0%
CGCTGCAATTTGTAAGCATG+AGG - chr3_2:82547416-82547435 Msa0430640:CDS 45.0%
GTGTTCCGTTGAGATTTCCA+GGG - chr3_2:82547439-82547458 Msa0430640:CDS 45.0%
TTCCAGGGACTAAGTTAGCT+TGG - chr3_2:82547454-82547473 Msa0430640:CDS 45.0%
! TCCAGGGACTAAGTTAGCTT+GGG - chr3_2:82547455-82547474 Msa0430640:CDS 45.0%
TAGGTGGAAGCAATTGTGGA+AGG - chr3_2:82547590-82547609 Msa0430640:CDS 45.0%
GCAATTGTGGAAGGTTATCG+CGG - chr3_2:82547599-82547618 Msa0430640:CDS 45.0%
TGAAGGATAAGGGTCCTGTT+TGG - chr3_2:82547688-82547707 Msa0430640:CDS 45.0%
GAAGGATAAGGGTCCTGTTT+GGG - chr3_2:82547689-82547708 Msa0430640:CDS 45.0%
!! GTCGAAAGAGCATGGGTTTT+TGG - chr3_2:82547824-82547843 Msa0430640:CDS 45.0%
!!! AGCATGGGTTTTTGGGATTC+AGG - chr3_2:82547832-82547851 Msa0430640:CDS 45.0%
AGGCACAATCTTGTAAGCTC+TGG + chr3_2:82547895-82547914 None:intergenic 45.0%
!! TAAAAAATAATAATCATAAT+AGG + chr3_2:82548178-82548197 None:intergenic 5.0%
!! TAAAAAATAATAATCATAAT+AGG + chr3_2:82548178-82548197 None:intergenic 5.0%
TCTCAACTATGAGCTGGTGG+TGG - chr3_2:82546633-82546652 Msa0430640:three_prime_UTR 50.0%
!! GCTACGTTCTGGAAGCTTCT+TGG + chr3_2:82546811-82546830 None:intergenic 50.0%
GCTTTAGTCGTTGGCGTAAC+CGG - chr3_2:82546829-82546848 Msa0430640:three_prime_UTR 50.0%
TTACCTCTAGCAGACACACC+AGG - chr3_2:82546880-82546899 Msa0430640:CDS 50.0%
TAAACCTTCCATCTACCGCC+TGG + chr3_2:82546901-82546920 None:intergenic 50.0%
GGCGGTAGATGGAAGGTTTA+TGG - chr3_2:82546901-82546920 Msa0430640:CDS 50.0%
ATGTGTGACATCGGTGAGGA+CGG + chr3_2:82547025-82547044 None:intergenic 50.0%
AGACATGTGTGACATCGGTG+AGG + chr3_2:82547029-82547048 None:intergenic 50.0%
! AGTTTTCTGCTTCGGTGGGA+CGG + chr3_2:82547071-82547090 None:intergenic 50.0%
! CGTTTGGGATAACTGCAGTG+AGG + chr3_2:82547125-82547144 None:intergenic 50.0%
! CGGTTTGGATTGAGACATGG+CGG + chr3_2:82547158-82547177 None:intergenic 50.0%
CGCCATGTCTCAATCCAAAC+CGG - chr3_2:82547156-82547175 Msa0430640:CDS 50.0%
CATGTCTCAATCCAAACCGG+CGG - chr3_2:82547159-82547178 Msa0430640:CDS 50.0%
GTTGGGCCCTTTGAGTCTTT+CGG - chr3_2:82547192-82547211 Msa0430640:CDS 50.0%
CCTCTGTGTATGGTGGTTCA+TGG + chr3_2:82547230-82547249 None:intergenic 50.0%
CCATGAACCACCATACACAG+AGG - chr3_2:82547227-82547246 Msa0430640:CDS 50.0%
GGCATATCCTCTGTGTATGG+TGG + chr3_2:82547237-82547256 None:intergenic 50.0%
GGTGTTCCGTTGAGATTTCC+AGG - chr3_2:82547438-82547457 Msa0430640:CDS 50.0%
TCCCAAGCTAACTTAGTCCC+TGG + chr3_2:82547459-82547478 None:intergenic 50.0%
GCAACATATTTGGGCTGCAG+TGG - chr3_2:82547518-82547537 Msa0430640:CDS 50.0%
! CGCGGAACAATTTGGGATTG+AGG - chr3_2:82547617-82547636 Msa0430640:CDS 50.0%
!! TGTGAAGGAGAATGGGTTGC+AGG - chr3_2:82547719-82547738 Msa0430640:CDS 50.0%
CTCAGCAACTTCTTCCAGCT+TGG + chr3_2:82547748-82547767 None:intergenic 50.0%
AGCTGGAAGAAGTTGCTGAG+TGG - chr3_2:82547748-82547767 Msa0430640:CDS 50.0%
TGGAAGAAGTTGCTGAGTGG+TGG - chr3_2:82547751-82547770 Msa0430640:CDS 50.0%
TCTCAACTATGAGCTGGTGG+TGG - chr3_2:82546633-82546652 Msa0430640:three_prime_UTR 50.0%
!! GCTACGTTCTGGAAGCTTCT+TGG + chr3_2:82546811-82546830 None:intergenic 50.0%
GCTTTAGTCGTTGGCGTAAC+CGG - chr3_2:82546829-82546848 Msa0430640:three_prime_UTR 50.0%
TTACCTCTAGCAGACACACC+AGG - chr3_2:82546880-82546899 Msa0430640:CDS 50.0%
TAAACCTTCCATCTACCGCC+TGG + chr3_2:82546901-82546920 None:intergenic 50.0%
GGCGGTAGATGGAAGGTTTA+TGG - chr3_2:82546901-82546920 Msa0430640:CDS 50.0%
ATGTGTGACATCGGTGAGGA+CGG + chr3_2:82547025-82547044 None:intergenic 50.0%
AGACATGTGTGACATCGGTG+AGG + chr3_2:82547029-82547048 None:intergenic 50.0%
! AGTTTTCTGCTTCGGTGGGA+CGG + chr3_2:82547071-82547090 None:intergenic 50.0%
! CGTTTGGGATAACTGCAGTG+AGG + chr3_2:82547125-82547144 None:intergenic 50.0%
! CGGTTTGGATTGAGACATGG+CGG + chr3_2:82547158-82547177 None:intergenic 50.0%
CGCCATGTCTCAATCCAAAC+CGG - chr3_2:82547156-82547175 Msa0430640:CDS 50.0%
CATGTCTCAATCCAAACCGG+CGG - chr3_2:82547159-82547178 Msa0430640:CDS 50.0%
GTTGGGCCCTTTGAGTCTTT+CGG - chr3_2:82547192-82547211 Msa0430640:CDS 50.0%
CCTCTGTGTATGGTGGTTCA+TGG + chr3_2:82547230-82547249 None:intergenic 50.0%
CCATGAACCACCATACACAG+AGG - chr3_2:82547227-82547246 Msa0430640:CDS 50.0%
GGCATATCCTCTGTGTATGG+TGG + chr3_2:82547237-82547256 None:intergenic 50.0%
GGTGTTCCGTTGAGATTTCC+AGG - chr3_2:82547438-82547457 Msa0430640:CDS 50.0%
TCCCAAGCTAACTTAGTCCC+TGG + chr3_2:82547459-82547478 None:intergenic 50.0%
GCAACATATTTGGGCTGCAG+TGG - chr3_2:82547518-82547537 Msa0430640:CDS 50.0%
! CGCGGAACAATTTGGGATTG+AGG - chr3_2:82547617-82547636 Msa0430640:CDS 50.0%
!! TGTGAAGGAGAATGGGTTGC+AGG - chr3_2:82547719-82547738 Msa0430640:CDS 50.0%
CTCAGCAACTTCTTCCAGCT+TGG + chr3_2:82547748-82547767 None:intergenic 50.0%
AGCTGGAAGAAGTTGCTGAG+TGG - chr3_2:82547748-82547767 Msa0430640:CDS 50.0%
TGGAAGAAGTTGCTGAGTGG+TGG - chr3_2:82547751-82547770 Msa0430640:CDS 50.0%
!! ACTATGAGCTGGTGGTGGTC+TGG - chr3_2:82546638-82546657 Msa0430640:three_prime_UTR 55.0%
!! TGGTGGTGGTCTGGTGCTAT+TGG - chr3_2:82546647-82546666 Msa0430640:three_prime_UTR 55.0%
!! TGGTGCTATTGGTGCTGCCA+AGG - chr3_2:82546658-82546677 Msa0430640:three_prime_UTR 55.0%
CGTTCCAAGAAGGTCGTGGA+CGG + chr3_2:82546936-82546955 None:intergenic 55.0%
TCTGCGTTCCAAGAAGGTCG+TGG + chr3_2:82546940-82546959 None:intergenic 55.0%
GGGTGATCTGCGTTCCAAGA+AGG + chr3_2:82546946-82546965 None:intergenic 55.0%
!! AGTTTGGTGGTGGCGTCGTT+TGG + chr3_2:82547000-82547019 None:intergenic 55.0%
ATCGGTGAGGACGGAGAGTT+TGG + chr3_2:82547016-82547035 None:intergenic 55.0%
!! CGCCGGTTTGGATTGAGACA+TGG + chr3_2:82547161-82547180 None:intergenic 55.0%
! CATAATGCTTGCCGCCGGTT+TGG + chr3_2:82547173-82547192 None:intergenic 55.0%
ACCGGCGGCAAGCATTATGT+TGG - chr3_2:82547174-82547193 Msa0430640:CDS 55.0%
CCCAACATAATGCTTGCCGC+CGG + chr3_2:82547178-82547197 None:intergenic 55.0%
CCGGCGGCAAGCATTATGTT+GGG - chr3_2:82547175-82547194 Msa0430640:CDS 55.0%
CGCGGCATATCCTCTGTGTA+TGG + chr3_2:82547240-82547259 None:intergenic 55.0%
CACAGAGGATATGCCGCGTT+TGG - chr3_2:82547242-82547261 Msa0430640:CDS 55.0%
! TGAGGAGTATGGGTTCGACG+AGG - chr3_2:82547635-82547654 Msa0430640:CDS 55.0%
GAGTATGGGTTCGACGAGGA+AGG - chr3_2:82547639-82547658 Msa0430640:CDS 55.0%
TGGGTTGCAGGTTACCAAGC+TGG - chr3_2:82547731-82547750 Msa0430640:CDS 55.0%
!! ACTATGAGCTGGTGGTGGTC+TGG - chr3_2:82546638-82546657 Msa0430640:three_prime_UTR 55.0%
!! TGGTGGTGGTCTGGTGCTAT+TGG - chr3_2:82546647-82546666 Msa0430640:three_prime_UTR 55.0%
!! TGGTGCTATTGGTGCTGCCA+AGG - chr3_2:82546658-82546677 Msa0430640:three_prime_UTR 55.0%
CGTTCCAAGAAGGTCGTGGA+CGG + chr3_2:82546936-82546955 None:intergenic 55.0%
TCTGCGTTCCAAGAAGGTCG+TGG + chr3_2:82546940-82546959 None:intergenic 55.0%
GGGTGATCTGCGTTCCAAGA+AGG + chr3_2:82546946-82546965 None:intergenic 55.0%
!! AGTTTGGTGGTGGCGTCGTT+TGG + chr3_2:82547000-82547019 None:intergenic 55.0%
ATCGGTGAGGACGGAGAGTT+TGG + chr3_2:82547016-82547035 None:intergenic 55.0%
!! CGCCGGTTTGGATTGAGACA+TGG + chr3_2:82547161-82547180 None:intergenic 55.0%
! CATAATGCTTGCCGCCGGTT+TGG + chr3_2:82547173-82547192 None:intergenic 55.0%
ACCGGCGGCAAGCATTATGT+TGG - chr3_2:82547174-82547193 Msa0430640:CDS 55.0%
CCCAACATAATGCTTGCCGC+CGG + chr3_2:82547178-82547197 None:intergenic 55.0%
CCGGCGGCAAGCATTATGTT+GGG - chr3_2:82547175-82547194 Msa0430640:CDS 55.0%
CGCGGCATATCCTCTGTGTA+TGG + chr3_2:82547240-82547259 None:intergenic 55.0%
CACAGAGGATATGCCGCGTT+TGG - chr3_2:82547242-82547261 Msa0430640:CDS 55.0%
! TGAGGAGTATGGGTTCGACG+AGG - chr3_2:82547635-82547654 Msa0430640:CDS 55.0%
GAGTATGGGTTCGACGAGGA+AGG - chr3_2:82547639-82547658 Msa0430640:CDS 55.0%
TGGGTTGCAGGTTACCAAGC+TGG - chr3_2:82547731-82547750 Msa0430640:CDS 55.0%
GTTGGCGTAACCGGCATCGT+CGG - chr3_2:82546838-82546857 Msa0430640:three_prime_UTR 60.0%
CCTCTAGCAGACACACCAGG+CGG - chr3_2:82546883-82546902 Msa0430640:CDS 60.0%
CAGACACACCAGGCGGTAGA+TGG - chr3_2:82546890-82546909 Msa0430640:CDS 60.0%
CACACCAGGCGGTAGATGGA+AGG - chr3_2:82546894-82546913 Msa0430640:CDS 60.0%
TCCAAGAAGGTCGTGGACGG+CGG + chr3_2:82546933-82546952 None:intergenic 60.0%
! GGTGGTGGCGTCGTTTGGAT+CGG + chr3_2:82546995-82547014 None:intergenic 60.0%
! GAGGACGGAGAGTTTGGTGG+TGG + chr3_2:82547010-82547029 None:intergenic 60.0%
GGTGAGGACGGAGAGTTTGG+TGG + chr3_2:82547013-82547032 None:intergenic 60.0%
! GGCGGAGATTCGGAGCGTTT+GGG + chr3_2:82547140-82547159 None:intergenic 60.0%
! TGGCGGAGATTCGGAGCGTT+TGG + chr3_2:82547141-82547160 None:intergenic 60.0%
GTTGGCGTAACCGGCATCGT+CGG - chr3_2:82546838-82546857 Msa0430640:three_prime_UTR 60.0%
CCTCTAGCAGACACACCAGG+CGG - chr3_2:82546883-82546902 Msa0430640:CDS 60.0%
CAGACACACCAGGCGGTAGA+TGG - chr3_2:82546890-82546909 Msa0430640:CDS 60.0%
CACACCAGGCGGTAGATGGA+AGG - chr3_2:82546894-82546913 Msa0430640:CDS 60.0%
TCCAAGAAGGTCGTGGACGG+CGG + chr3_2:82546933-82546952 None:intergenic 60.0%
! GGTGGTGGCGTCGTTTGGAT+CGG + chr3_2:82546995-82547014 None:intergenic 60.0%
! GAGGACGGAGAGTTTGGTGG+TGG + chr3_2:82547010-82547029 None:intergenic 60.0%
GGTGAGGACGGAGAGTTTGG+TGG + chr3_2:82547013-82547032 None:intergenic 60.0%
! GGCGGAGATTCGGAGCGTTT+GGG + chr3_2:82547140-82547159 None:intergenic 60.0%
! TGGCGGAGATTCGGAGCGTT+TGG + chr3_2:82547141-82547160 None:intergenic 60.0%
GAGGCTGTTGCCGACGATGC+CGG + chr3_2:82546851-82546870 None:intergenic 65.0%
CCGCCTGGTGTGTCTGCTAG+AGG + chr3_2:82546886-82546905 None:intergenic 65.0%
CCAAGAAGGTCGTGGACGGC+GGG + chr3_2:82546932-82546951 None:intergenic 65.0%
GAGGCTGTTGCCGACGATGC+CGG + chr3_2:82546851-82546870 None:intergenic 65.0%
CCGCCTGGTGTGTCTGCTAG+AGG + chr3_2:82546886-82546905 None:intergenic 65.0%
CCAAGAAGGTCGTGGACGGC+GGG + chr3_2:82546932-82546951 None:intergenic 65.0%
CCCGCCGTCCACGACCTTCT+TGG - chr3_2:82546929-82546948 Msa0430640:CDS 70.0%
CCCGCCGTCCACGACCTTCT+TGG - chr3_2:82546929-82546948 Msa0430640:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 82546513 82548276 82546513 ID=Msa0430640;Name=Msa0430640
chr3_2 mRNA 82546513 82548276 82546513 ID=Msa0430640-mRNA-1;Parent=Msa0430640;Name=Msa0430640-mRNA-1;_AED=0.00;_eAED=0.00;_QI=128|1|0.5|1|1|1|2|359|391
chr3_2 exon 82546513 82548008 82546513 ID=Msa0430640-mRNA-1:exon:22913;Parent=Msa0430640-mRNA-1
chr3_2 exon 82548110 82548276 82548110 ID=Msa0430640-mRNA-1:exon:22912;Parent=Msa0430640-mRNA-1
chr3_2 five_prime_UTR 82548149 82548276 82548149 ID=Msa0430640-mRNA-1:five_prime_utr;Parent=Msa0430640-mRNA-1
chr3_2 CDS 82548110 82548148 82548110 ID=Msa0430640-mRNA-1:cds;Parent=Msa0430640-mRNA-1
chr3_2 CDS 82546872 82548008 82546872 ID=Msa0430640-mRNA-1:cds;Parent=Msa0430640-mRNA-1
chr3_2 three_prime_UTR 82546513 82546871 82546513 ID=Msa0430640-mRNA-1:three_prime_utr;Parent=Msa0430640-mRNA-1
Gene Sequence

>Msa0430640

ATGAGCTGGTGGTGGTCTGGTGCTATTGGTGCTGCCAAGCAGAAGAAACTGGATGAAGATGAAGCACCAAGAAGCTTCCAGAACGTAGCTTTAGTCGTTGGCGTAACCGGCATCGTCGGCAACAGCCTCGCTGAAATTTTACCTCTAGCAGACACACCAGGCGGTAGATGGAAGGTTTATGGCGTTGCCCGCCGTCCACGACCTTCTTGGAACGCAGATCACCCTGTAGAATACATCCAATGTGACATCACCGATCCAAACGACGCCACCACCAAACTCTCCGTCCTCACCGATGTCACACATGTCTTCTACGTCTGTTGGGCTAGCCGTCCCACCGAAGCAGAAAACTGTGAAATGAACGGCGCTATGCTCAAAAACGTCCTCACTGCAGTTATCCCAAACGCTCCGAATCTCCGCCATGTCTCAATCCAAACCGGCGGCAAGCATTATGTTGGGCCCTTTGAGTCTTTCGGCAAGATCAAGTACCATGAACCACCATACACAGAGGATATGCCGCGTTTGGATTATCATAATTTCTATTATACACTTGAAGATGTTTTGTTTGAAGAAACAGGGAAGAAAGAAGGTGTGAGTTGGTCTGTTCATAGACCACTTCTCATCTTTGGATTTTCACCTTACAGTATGATGAATATCATTGGCACCATTTGTGTTTACGCTGCAATTTGTAAGCATGAGGGTGTTCCGTTGAGATTTCCAGGGACTAAGTTAGCTTGGGAGAATTACTACATGGCTTCTGATGCAGATTTGATTGCAGAGCAACATATTTGGGCTGCAGTGGATCCTTATGCTAAGAATGAAGCATTCAACTGTAGCAATGGTGATGTTTTTAGGTGGAAGCAATTGTGGAAGGTTATCGCGGAACAATTTGGGATTGAGGAGTATGGGTTCGACGAGGAAGGTCCTCGTTTGAAGTTAACGGAGTTGATGAAGGATAAGGGTCCTGTTTGGGATGAGATTGTGAAGGAGAATGGGTTGCAGGTTACCAAGCTGGAAGAAGTTGCTGAGTGGTGGTTTGCAGATGCTTGTTTTGGAGGTAATGGGTTTACGGATAGCATGAACAAGTCGAAAGAGCATGGGTTTTTGGGATTCAGGAACACTAAGAATTCGCTTATCAATTGGATTGATAGGACCAGAGCTTACAAGATTGTGCCTTGA

Protein sequence

>Msa0430640

MSWWWSGAIGAAKQKKLDEDEAPRSFQNVALVVGVTGIVGNSLAEILPLADTPGGRWKVYGVARRPRPSWNADHPVEYIQCDITDPNDATTKLSVLTDVTHVFYVCWASRPTEAENCEMNGAMLKNVLTAVIPNAPNLRHVSIQTGGKHYVGPFESFGKIKYHEPPYTEDMPRLDYHNFYYTLEDVLFEETGKKEGVSWSVHRPLLIFGFSPYSMMNIIGTICVYAAICKHEGVPLRFPGTKLAWENYYMASDADLIAEQHIWAAVDPYAKNEAFNCSNGDVFRWKQLWKVIAEQFGIEEYGFDEEGPRLKLTELMKDKGPVWDEIVKENGLQVTKLEEVAEWWFADACFGGNGFTDSMNKSKEHGFLGFRNTKNSLINWIDRTRAYKIVP*