AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0202090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0202090 MtrunA17_Chr2g0299001 94.397 928 27 1 1 903 1 928 0.0 1793
Msa0202090 MtrunA17_Chr7g0219851 46.954 952 433 15 1 898 3 936 0.0 797
Msa0202090 MtrunA17_Chr5g0404741 34.829 936 509 27 1 880 1 891 4.78e-139 437
Msa0202090 MtrunA17_Chr5g0409971 30.932 944 575 24 1 900 1 911 3.31e-111 364
Msa0202090 MtrunA17_Chr3g0081391 29.718 959 579 29 1 899 1 924 9.40e-108 355
Msa0202090 MtrunA17_Chr3g0081211 29.106 962 580 29 1 899 1 923 4.36e-107 353
Msa0202090 MtrunA17_Chr5g0410021 31.375 953 556 32 1 900 1 908 3.35e-106 350
Msa0202090 MtrunA17_Chr3g0100961 28.662 949 590 24 1 903 1 908 5.04e-106 349
Msa0202090 MtrunA17_Chr5g0410001 30.137 949 566 29 6 900 5 910 7.59e-106 349
Msa0202090 MtrunA17_Chr5g0410031 29.990 957 571 31 1 900 1 915 1.64e-104 346
Msa0202090 MtrunA17_Chr3g0101321 28.917 951 577 28 1 898 1 905 5.82e-103 341
Msa0202090 MtrunA17_Chr3g0080601 29.205 969 584 25 1 903 1 933 7.63e-103 342
Msa0202090 MtrunA17_Chr3g0081341 29.845 965 569 30 1 899 66 988 7.74e-103 343
Msa0202090 MtrunA17_Chr4g0037421 29.448 961 542 30 1 870 38 953 1.20e-102 342
Msa0202090 MtrunA17_Chr5g0409991 29.661 944 582 27 1 900 1 906 1.77e-102 340
Msa0202090 MtrunA17_Chr3g0100831 29.206 945 578 28 1 896 1 903 1.71e-101 337
Msa0202090 MtrunA17_Chr3g0080791 29.240 961 580 27 1 899 1 923 3.93e-101 337
Msa0202090 MtrunA17_Chr3g0080741 27.871 958 590 25 1 894 1 921 1.22e-100 335
Msa0202090 MtrunA17_Chr3g0094301 28.972 963 583 24 1 900 1 925 3.55e-100 334
Msa0202090 MtrunA17_Chr7g0229761 28.972 963 583 24 1 900 1 925 3.55e-100 334
Msa0202090 MtrunA17_Chr3g0112511 28.830 940 579 26 1 894 1 896 6.02e-100 333
Msa0202090 MtrunA17_Chr1g0151481 27.831 945 603 26 1 893 1 918 1.19e-99 333
Msa0202090 MtrunA17_Chr3g0101331 27.784 943 571 27 1 872 1 904 3.59e-98 328
Msa0202090 MtrunA17_Chr3g0080771 28.202 968 595 27 1 903 1 933 9.31e-97 325
Msa0202090 MtrunA17_Chr3g0081191 28.721 954 591 28 1 899 1 920 1.97e-96 324
Msa0202090 MtrunA17_Chr3g0080751 28.054 966 589 29 1 900 1 926 4.11e-95 320
Msa0202090 MtrunA17_Chr1g0189351 27.974 908 556 23 1 845 1 873 3.34e-94 318
Msa0202090 MtrunA17_Chr3g0080731 29.167 960 585 27 1 900 1 925 1.30e-92 313
Msa0202090 MtrunA17_Chr3g0081371 26.468 971 589 22 3 899 11 930 8.61e-91 308
Msa0202090 MtrunA17_Chr3g0081361 27.273 957 595 26 5 899 13 930 8.21e-90 306
Msa0202090 MtrunA17_Chr3g0101011 28.812 892 538 28 26 855 34 890 1.04e-88 303
Msa0202090 MtrunA17_Chr3g0101271 28.432 925 561 26 21 894 8 882 1.40e-86 296
Msa0202090 MtrunA17_Chr3g0101241 28.432 925 561 26 21 894 8 882 2.79e-86 295
Msa0202090 MtrunA17_Chr3g0081181 27.330 955 591 25 1 899 1 908 2.34e-83 288
Msa0202090 MtrunA17_Chr3g0100971 27.720 772 472 24 1 725 1 733 1.89e-81 278
Msa0202090 MtrunA17_Chr3g0080631 26.618 958 555 28 1 894 1 874 8.36e-81 280
Msa0202090 MtrunA17_Chr3g0101181 27.563 907 529 28 44 875 54 907 7.85e-78 272
Msa0202090 MtrunA17_Chr1g0197241 28.211 911 540 28 26 872 672 1532 1.01e-77 277
Msa0202090 MtrunA17_Chr3g0101231 27.754 944 560 28 26 897 34 927 1.51e-76 268
Msa0202090 MtrunA17_Chr3g0101221 27.748 937 567 26 26 896 28 920 4.44e-76 267
Msa0202090 MtrunA17_Chr3g0100761 27.073 772 437 24 1 725 1 693 4.12e-74 257
Msa0202090 MtrunA17_Chr3g0100801 26.999 863 485 27 6 817 3 771 4.41e-74 259
Msa0202090 MtrunA17_Chr3g0100851 26.884 796 511 21 106 869 1 757 8.75e-74 258
Msa0202090 MtrunA17_Chr1g0197201 27.390 931 542 27 26 872 464 1344 1.32e-71 258
Msa0202090 MtrunA17_Chr3g0101201 26.738 935 584 27 17 894 26 916 2.21e-69 248
Msa0202090 MtrunA17_Chr3g0101251 27.302 923 544 27 26 894 29 878 3.93e-68 244
Msa0202090 MtrunA17_Chr3g0100681 29.967 604 358 18 189 758 10 582 2.60e-66 233
Msa0202090 MtrunA17_Chr3g0084351 28.693 589 354 16 65 622 1 554 1.22e-64 227
Msa0202090 MtrunA17_Chr1g0164391 29.577 710 388 24 31 689 40 688 4.17e-64 235
Msa0202090 MtrunA17_Chr3g0080721 27.561 693 424 20 253 900 2 661 4.32e-64 229
Msa0202090 MtrunA17_Chr3g0089961 27.374 895 526 33 31 852 41 884 2.82e-63 230
Msa0202090 MtrunA17_Chr7g0248221 26.372 929 538 32 10 893 14 841 4.69e-63 229
Msa0202090 MtrunA17_Chr3g0101391 29.776 581 359 15 320 880 30 581 5.92e-63 223
Msa0202090 MtrunA17_Chr3g0086161 26.484 910 548 33 28 875 32 882 6.32e-63 231
Msa0202090 MtrunA17_Chr3g0082311 29.313 713 385 26 31 689 40 687 6.40e-63 231
Msa0202090 MtrunA17_Chr3g0086221 27.173 909 537 34 31 875 35 882 1.76e-62 230
Msa0202090 MtrunA17_Chr1g0169901 26.986 919 550 34 1 851 6 871 9.13e-62 227
Msa0202090 MtrunA17_Chr3g0089871 26.477 982 575 36 9 893 14 945 1.54e-61 228
Msa0202090 MtrunA17_Chr3g0089421 29.050 716 419 23 31 705 41 708 4.89e-61 226
Msa0202090 MtrunA17_Chr3g0089651 29.149 717 413 23 34 705 44 710 4.76e-60 223
Msa0202090 MtrunA17_Chr3g0082131 29.513 698 410 21 42 701 50 703 6.44e-60 222
Msa0202090 MtrunA17_Chr3g0089541 28.992 714 417 23 34 705 44 709 7.25e-60 222
Msa0202090 MtrunA17_Chr3g0092241 27.397 949 516 40 31 872 41 923 8.89e-60 221
Msa0202090 MtrunA17_Chr2g0309721 28.670 722 409 26 31 705 41 703 1.19e-59 222
Msa0202090 MtrunA17_Chr3g0087701 28.222 900 532 36 28 869 32 875 1.78e-59 221
Msa0202090 MtrunA17_Chr3g0089991 28.392 715 421 23 34 705 44 710 2.04e-59 221
Msa0202090 MtrunA17_Chr5g0446611 27.816 870 504 36 31 831 41 855 2.33e-59 218
Msa0202090 MtrunA17_Chr3g0080651 29.333 600 370 17 324 900 272 840 3.65e-59 218
Msa0202090 MtrunA17_Chr3g0080651 29.333 225 143 5 1 212 4 225 8.35e-18 89.0
Msa0202090 MtrunA17_Chr3g0089811 27.894 717 420 24 31 703 41 704 4.93e-59 220
Msa0202090 MtrunA17_Chr4g0025391 26.605 966 569 36 1 888 6 909 6.62e-59 219
Msa0202090 MtrunA17_Chr3g0089761 27.388 869 521 31 47 851 57 879 6.87e-59 219
Msa0202090 MtrunA17_Chr1g0164611 28.672 708 407 23 42 699 52 711 7.35e-59 218
Msa0202090 MtrunA17_Chr3g0086181 26.497 902 555 31 28 875 32 879 7.36e-59 217
Msa0202090 MtrunA17_Chr3g0100731 28.338 674 404 21 271 903 35 670 1.08e-58 213
Msa0202090 MtrunA17_Chr1g0155321 26.898 922 532 35 1 853 1 849 1.66e-58 217
Msa0202090 MtrunA17_Chr3g0089501 28.056 720 413 26 32 703 40 702 2.77e-58 215
Msa0202090 MtrunA17_Chr3g0089781 26.344 949 526 35 31 872 41 923 2.84e-58 216
Msa0202090 MtrunA17_Chr3g0092261 25.934 937 546 32 30 872 85 967 2.98e-58 218
Msa0202090 MtrunA17_Chr3g0089911 27.970 665 387 22 30 655 40 651 4.71e-58 211
Msa0202090 MtrunA17_Chr3g0084031 27.973 883 523 36 31 852 42 872 7.21e-58 216
Msa0202090 MtrunA17_Chr3g0091081 27.408 872 498 34 34 831 44 854 1.10e-57 216
Msa0202090 MtrunA17_Chr3g0090691 27.097 930 516 38 42 870 52 920 1.22e-57 215
Msa0202090 MtrunA17_Chr5g0433771 25.810 926 566 32 10 899 14 854 1.24e-57 213
Msa0202090 MtrunA17_Chr3g0089591 28.345 695 398 24 31 680 41 680 2.03e-57 215
Msa0202090 MtrunA17_Chr3g0089471 28.327 759 413 30 32 705 42 754 2.94e-57 214
Msa0202090 MtrunA17_Chr3g0084051 29.010 879 514 37 31 852 40 865 3.00e-57 214
Msa0202090 MtrunA17_Chr3g0085651 26.415 901 551 29 28 869 32 879 5.13e-57 214
Msa0202090 MtrunA17_Chr3g0090651 27.184 927 512 39 45 869 55 920 5.64e-57 212
Msa0202090 MtrunA17_Chr3g0082101 28.367 698 370 22 42 699 52 659 5.83e-57 212
Msa0202090 MtrunA17_Chr3g0090141 26.161 883 528 31 40 851 50 879 6.01e-57 213
Msa0202090 MtrunA17_Chr3g0089601 27.069 894 525 35 31 851 39 878 6.37e-57 211
Msa0202090 MtrunA17_Chr3g0085331 27.549 922 543 39 10 858 18 887 8.91e-57 213
Msa0202090 MtrunA17_Chr3g0086151 25.892 869 514 29 28 858 32 808 9.74e-57 211
Msa0202090 MtrunA17_Chr2g0282991 26.570 892 526 35 31 852 41 873 1.16e-56 213
Msa0202090 MtrunA17_Chr3g0085501 27.970 926 550 37 10 869 18 892 1.20e-56 212
Msa0202090 MtrunA17_Chr3g0089251 28.255 722 411 27 31 703 70 733 1.79e-56 212
Msa0202090 MtrunA17_Chr5g0429961 28.155 927 536 33 1 867 1 857 2.59e-56 210
Msa0202090 MtrunA17_Chr7g0257541 24.705 931 567 29 12 896 18 860 3.78e-56 209
Msa0202090 MtrunA17_Chr3g0082791 27.894 864 527 33 45 858 56 873 4.13e-56 210
Msa0202090 MtrunA17_Chr5g0431051 28.244 917 526 33 1 851 1 851 4.83e-56 209
Msa0202090 MtrunA17_Chr3g0089211 28.116 722 412 27 31 703 88 751 5.00e-56 211
Msa0202090 MtrunA17_Chr3g0082391 28.571 714 416 25 31 700 40 703 6.03e-56 207
Msa0202090 MtrunA17_Chr3g0091061 26.310 935 518 37 42 870 52 921 1.01e-55 209
Msa0202090 MtrunA17_Chr3g0082351 28.947 722 388 29 34 700 43 694 1.48e-55 209
Msa0202090 MtrunA17_Chr1g0164581 28.448 696 396 19 42 701 50 679 3.19e-55 208
Msa0202090 MtrunA17_Chr3g0086621 25.943 875 506 31 28 858 32 808 4.06e-55 207
Msa0202090 MtrunA17_Chr5g0430141 27.519 923 529 30 1 851 1 855 5.67e-55 206
Msa0202090 MtrunA17_Chr1g0189551 26.872 681 414 23 10 657 42 671 7.70e-55 205
Msa0202090 MtrunA17_Chr3g0087581 28.270 711 423 25 28 703 32 690 8.12e-55 206
Msa0202090 MtrunA17_Chr1g0155991 26.316 931 557 31 1 870 1 863 1.02e-54 206
Msa0202090 MtrunA17_Chr2g0316291 26.078 928 559 31 5 855 9 886 1.06e-54 206
Msa0202090 MtrunA17_Chr6g0484551 27.334 889 487 32 31 890 41 799 1.23e-54 204
Msa0202090 MtrunA17_Chr3g0085561 28.004 932 520 40 10 869 18 870 2.78e-54 204
Msa0202090 MtrunA17_Chr5g0430721 26.501 966 560 35 1 888 42 935 3.19e-54 204
Msa0202090 MtrunA17_Chr3g0084971 28.103 701 426 19 28 699 38 689 3.68e-54 205
Msa0202090 MtrunA17_Chr3g0087841 25.897 892 537 32 31 851 41 879 2.20e-53 202
Msa0202090 MtrunA17_Chr5g0430951 26.812 690 417 20 1 659 1 633 2.22e-53 201
Msa0202090 MtrunA17_Chr5g0430291 26.499 917 545 33 1 851 1 854 3.49e-53 201
Msa0202090 MtrunA17_Chr6g0467961 26.136 704 443 20 1 682 1 649 4.32e-53 199
Msa0202090 MtrunA17_Chr8g0338621 27.136 667 405 23 24 655 28 648 4.68e-53 196
Msa0202090 MtrunA17_Chr6g0471941 27.622 677 410 22 10 655 14 641 5.14e-53 200
Msa0202090 MtrunA17_Chr3g0082871 27.973 740 420 30 8 699 6 680 1.94e-52 196
Msa0202090 MtrunA17_Chr4g0027251 26.316 931 531 34 1 851 1 856 2.48e-52 198
Msa0202090 MtrunA17_Chr3g0084081 26.745 931 563 35 31 895 40 917 3.94e-52 198
Msa0202090 MtrunA17_Chr3g0087541 27.535 937 549 35 10 868 18 902 5.00e-52 198
Msa0202090 MtrunA17_Chr3g0085471 27.380 935 556 39 1 870 5 881 6.27e-52 198
Msa0202090 MtrunA17_Chr3g0082321 28.655 684 373 26 31 689 40 633 7.42e-52 195
Msa0202090 MtrunA17_Chr3g0085451 27.412 912 509 37 27 869 35 862 8.18e-52 197
Msa0202090 MtrunA17_Chr7g0248531 27.159 880 508 35 42 851 50 866 1.30e-51 196
Msa0202090 MtrunA17_Chr8g0348931 24.521 991 585 34 9 893 14 947 1.48e-51 196
Msa0202090 MtrunA17_Chr5g0430581 25.407 921 569 30 1 869 1 855 2.12e-51 195
Msa0202090 MtrunA17_Chr6g0468451 25.821 914 556 32 1 855 1 851 2.24e-51 196
Msa0202090 MtrunA17_Chr7g0257221 25.107 932 563 30 12 896 16 859 4.89e-51 193
Msa0202090 MtrunA17_Chr5g0430511 26.157 929 537 33 1 853 1 856 6.50e-51 194
Msa0202090 MtrunA17_Chr5g0430641 26.872 908 548 35 1 851 1 849 1.69e-50 192
Msa0202090 MtrunA17_Chr1g0164631 27.440 707 414 24 42 699 51 707 2.21e-50 192
Msa0202090 MtrunA17_Chr5g0414181 25.188 933 570 30 1 869 1 869 2.99e-50 192
Msa0202090 MtrunA17_Chr5g0429951 26.475 695 412 21 1 657 1 634 6.01e-50 191
Msa0202090 MtrunA17_Chr3g0113791 26.201 874 512 30 43 851 51 856 6.43e-50 191
Msa0202090 MtrunA17_Chr7g0244231 25.641 936 520 33 1 851 1 845 7.94e-50 191
Msa0202090 MtrunA17_Chr5g0430621 25.671 931 558 32 1 867 1 861 8.82e-50 191
Msa0202090 MtrunA17_Chr6g0468121 25.035 723 464 18 1 699 1 669 2.43e-49 189
Msa0202090 MtrunA17_Chr3g0113481 28.277 679 381 25 43 682 51 662 2.91e-49 187
Msa0202090 MtrunA17_Chr8g0338391 25.735 680 418 21 10 655 14 640 3.99e-49 188
Msa0202090 MtrunA17_Chr2g0299091 24.619 918 570 34 34 875 10 881 4.80e-49 188
Msa0202090 MtrunA17_Chr3g0090371 25.539 881 535 30 40 851 50 878 6.23e-49 188
Msa0202090 MtrunA17_Chr8g0352831 25.615 691 419 20 45 686 55 699 9.06e-49 188
Msa0202090 MtrunA17_Chr3g0090401 25.884 877 518 33 40 851 261 1070 1.04e-48 188
Msa0202090 MtrunA17_Chr8g0337891 27.187 640 393 21 24 634 28 623 2.91e-48 184
Msa0202090 MtrunA17_Chr6g0475491 27.063 521 321 14 10 498 14 507 3.46e-48 184
Msa0202090 MtrunA17_Chr7g0257201 24.732 934 564 28 12 896 16 859 4.09e-48 184
Msa0202090 MtrunA17_Chr3g0082811 27.945 730 430 30 9 699 8 680 4.41e-48 184
Msa0202090 MtrunA17_Chr8g0355411 26.458 703 431 26 10 679 16 665 5.63e-48 184
Msa0202090 MtrunA17_Chr7g0221481 25.000 880 521 31 28 858 32 821 6.69e-48 184
Msa0202090 MtrunA17_Chr4g0051651 26.596 658 397 24 26 632 48 670 7.11e-48 181
Msa0202090 MtrunA17_Chr3g0082891 26.029 899 528 34 9 867 8 809 8.63e-48 183
Msa0202090 MtrunA17_Chr3g0082881 27.596 732 428 28 10 699 9 680 1.31e-47 183
Msa0202090 MtrunA17_Chr6g0467911 25.388 709 448 22 1 682 1 655 2.87e-47 181
Msa0202090 MtrunA17_Chr2g0299121 25.274 914 569 35 34 875 36 907 2.92e-47 183
Msa0202090 MtrunA17_Chr3g0090431 27.975 790 442 30 133 851 18 751 3.12e-47 182
Msa0202090 MtrunA17_Chr6g0468101 26.126 666 400 20 1 631 1 609 6.61e-47 182
Msa0202090 MtrunA17_Chr3g0085131 26.293 909 517 39 31 853 36 877 6.66e-47 182
Msa0202090 MtrunA17_Chr8g0338261 27.035 651 380 20 24 633 28 624 6.99e-47 181
Msa0202090 MtrunA17_Chr3g0086091 27.876 739 412 28 198 869 1 685 7.07e-47 181
Msa0202090 MtrunA17_Chr5g0414311 26.840 693 426 22 1 657 1 648 7.42e-47 182
Msa0202090 MtrunA17_Chr5g0417301 25.841 654 372 21 1 633 1 562 1.11e-46 176
Msa0202090 MtrunA17_Chr7g0248431 27.186 526 324 17 10 501 14 514 1.14e-46 176
Msa0202090 MtrunA17_Chr5g0430441 26.301 692 420 22 1 659 1 635 1.50e-46 180
Msa0202090 MtrunA17_Chr8g0346831 26.404 659 411 22 26 655 30 643 2.79e-46 179
Msa0202090 MtrunA17_Chr8g0352861 24.226 937 533 36 31 865 41 902 3.12e-46 180
Msa0202090 MtrunA17_Chr3g0123111 23.548 947 573 31 1 873 1 870 6.90e-46 179
Msa0202090 MtrunA17_Chr3g0083621 24.668 904 542 29 31 853 44 889 1.26e-45 178
Msa0202090 MtrunA17_Chr3g0083721 26.081 763 427 26 165 853 122 821 1.57e-45 177
Msa0202090 MtrunA17_Chr6g0470081 25.952 709 450 19 1 685 1 658 1.57e-45 177
Msa0202090 MtrunA17_Chr7g0257191 25.253 891 534 33 25 869 29 833 2.96e-45 176
Msa0202090 MtrunA17_Chr3g0085521 26.269 906 531 39 32 869 36 872 3.51e-45 176
Msa0202090 MtrunA17_Chr2g0299101 25.086 869 539 32 34 833 36 861 3.61e-45 176
Msa0202090 MtrunA17_Chr6g0470011 25.637 706 450 19 1 682 1 655 6.66e-45 176
Msa0202090 MtrunA17_Chr8g0338671 30.502 518 290 17 154 642 39 515 1.60e-44 170
Msa0202090 MtrunA17_Chr2g0299151 24.834 902 552 31 31 865 40 882 1.62e-44 174
Msa0202090 MtrunA17_Chr3g0089931 27.218 496 276 18 34 495 44 488 3.39e-44 168
Msa0202090 MtrunA17_Chr6g0468151 24.017 712 456 17 1 682 1 657 3.55e-44 173
Msa0202090 MtrunA17_Chr5g0415471 25.827 937 573 32 1 873 1 879 4.51e-44 173
Msa0202090 MtrunA17_Chr1g0197181 30.636 519 289 18 409 872 3 505 6.79e-44 167
Msa0202090 MtrunA17_Chr1g0169951 25.419 716 454 21 5 679 9 685 8.12e-44 170
Msa0202090 MtrunA17_Chr1g0147141 26.599 891 522 34 30 852 53 879 8.66e-44 172
Msa0202090 MtrunA17_Chr6g0468021 25.641 702 449 19 1 682 1 649 1.37e-43 171
Msa0202090 MtrunA17_Chr3g0086741 26.962 879 517 36 32 858 36 841 1.61e-43 170
Msa0202090 MtrunA17_Chr3g0085091 25.780 737 449 28 4 699 13 692 1.91e-43 171
Msa0202090 MtrunA17_Chr4g0009781 26.604 748 446 27 5 703 9 702 1.98e-43 171
Msa0202090 MtrunA17_Chr3g0091041 28.270 474 276 16 45 495 55 487 3.41e-43 165
Msa0202090 MtrunA17_Chr3g0078361 28.875 471 265 13 195 625 1 441 6.29e-43 162
Msa0202090 MtrunA17_Chr8g0338361 29.845 516 295 18 150 637 17 493 8.00e-43 164
Msa0202090 MtrunA17_Chr3g0085931 25.354 706 450 20 1 682 1 653 8.23e-43 169
Msa0202090 MtrunA17_Chr5g0415551 29.352 586 315 21 134 682 13 536 1.43e-42 166
Msa0202090 MtrunA17_Chr3g0089431 27.824 478 278 13 9 446 14 464 3.07e-42 161
Msa0202090 MtrunA17_Chr3g0083751 24.701 919 543 31 33 865 44 899 3.42e-42 167
Msa0202090 MtrunA17_Chr3g0101211 26.818 440 261 12 195 610 1 403 6.22e-42 158
Msa0202090 MtrunA17_Chr1g0189271 29.787 329 193 7 162 465 8 323 9.45e-42 155
Msa0202090 MtrunA17_Chr3g0080871 26.952 794 478 28 138 870 129 881 1.26e-41 165
Msa0202090 MtrunA17_Chr3g0085111 26.483 725 448 25 9 699 14 687 1.28e-41 165
Msa0202090 MtrunA17_Chr4g0020501 25.960 651 368 22 45 663 10 578 2.56e-41 164
Msa0202090 MtrunA17_Chr3g0087731 27.510 727 430 29 198 887 1 667 7.81e-41 162
Msa0202090 MtrunA17_Chr6g0468271 23.830 705 457 21 1 682 1 648 2.46e-40 161
Msa0202090 MtrunA17_Chr5g0414231 26.226 530 326 15 1 496 1 499 3.17e-40 155
Msa0202090 MtrunA17_Chr4g0008461 27.657 781 456 31 165 870 131 877 3.33e-40 161
Msa0202090 MtrunA17_Chr3g0085171 25.829 724 448 27 10 699 8 676 4.06e-40 160
Msa0202090 MtrunA17_Chr8g0338251 26.220 656 394 20 10 633 14 611 6.35e-40 158
Msa0202090 MtrunA17_Chr5g0415511 23.596 712 464 20 1 677 1 667 1.44e-39 157
Msa0202090 MtrunA17_Chr7g0218941 24.465 654 386 22 24 633 28 617 2.20e-39 158
Msa0202090 MtrunA17_Chr3g0085751 24.947 942 564 37 2 869 3 875 2.91e-39 158
Msa0202090 MtrunA17_Chr6g0468331 23.726 687 430 22 1 633 1 647 7.28e-39 155
Msa0202090 MtrunA17_Chr6g0468341 25.049 511 326 12 1 489 1 476 8.12e-39 156
Msa0202090 MtrunA17_Chr3g0091011 24.469 895 525 38 4 858 13 796 9.23e-39 156
Msa0202090 MtrunA17_Chr6g0470021 27.338 556 331 15 154 682 36 545 1.74e-38 154
Msa0202090 MtrunA17_Chr8g0352211 25.266 657 405 20 24 646 1028 1632 2.55e-38 155
Msa0202090 MtrunA17_Chr1g0159111 28.597 549 340 21 164 679 152 681 4.00e-38 154
Msa0202090 MtrunA17_Chr5g0430331 26.840 462 275 10 1 432 1 429 7.63e-38 147
Msa0202090 MtrunA17_Chr1g0168901 25.571 919 511 37 31 870 40 864 1.60e-37 152
Msa0202090 MtrunA17_Chr5g0414201 24.348 690 437 19 1 657 1 638 6.39e-37 150
Msa0202090 MtrunA17_Chr4g0010201 25.764 753 454 25 1 702 1 699 1.17e-36 149
Msa0202090 MtrunA17_Chr4g0071021 26.569 478 271 13 1 445 1 431 1.68e-36 143
Msa0202090 MtrunA17_Chr4g0010251 25.575 739 451 25 5 699 9 692 2.23e-36 148
Msa0202090 MtrunA17_Chr4g0010261 26.197 752 453 27 1 702 1 700 3.02e-36 148
Msa0202090 MtrunA17_Chr4g0048421 27.320 571 358 18 164 702 151 696 3.49e-36 147
Msa0202090 MtrunA17_Chr8g0356251 25.650 885 459 39 94 869 125 919 4.32e-36 148
Msa0202090 MtrunA17_Chr3g0085161 27.931 580 325 24 158 699 26 550 1.17e-35 146
Msa0202090 MtrunA17_Chr4g0048471 27.615 478 280 16 180 619 41 490 5.36e-35 143
Msa0202090 MtrunA17_Chr6g0456131 26.977 708 405 29 24 682 27 671 6.75e-35 144
Msa0202090 MtrunA17_Chr3g0085551 28.364 550 324 20 181 699 66 576 7.46e-35 142
Msa0202090 MtrunA17_Chr4g0010221 25.901 749 448 29 5 703 9 700 8.86e-35 143
Msa0202090 MtrunA17_Chr3g0084061 25.485 722 428 27 26 699 38 697 3.14e-34 142
Msa0202090 MtrunA17_Chr8g0351821 24.524 473 300 11 1 445 1 444 7.67e-34 136
Msa0202090 MtrunA17_Chr3g0085801 25.339 663 415 23 10 631 18 641 1.50e-33 139
Msa0202090 MtrunA17_Chr6g0456121 25.787 667 382 26 25 655 32 621 4.82e-33 137
Msa0202090 MtrunA17_Chr3g0100701 28.631 482 297 16 426 893 282 730 5.26e-33 137
Msa0202090 MtrunA17_Chr3g0100701 24.125 257 185 3 1 248 1 256 3.40e-22 102
Msa0202090 MtrunA17_Chr6g0478721 26.937 568 355 23 164 698 69 609 8.87e-32 133
Msa0202090 MtrunA17_Chr3g0113781 25.894 699 405 27 216 851 3 651 1.58e-31 132
Msa0202090 MtrunA17_Chr3g0083681 24.528 795 460 32 153 870 140 871 3.24e-31 132
Msa0202090 MtrunA17_Chr5g0430901 23.197 957 549 34 1 867 1 861 5.52e-31 130
Msa0202090 MtrunA17_Chr3g0100781 25.294 340 226 7 1 325 1 327 5.82e-31 125
Msa0202090 MtrunA17_Chr5g0413811 27.485 684 400 24 259 896 33 666 7.65e-30 126
Msa0202090 MtrunA17_Chr2g0299141 27.650 434 253 16 298 696 7 414 4.63e-29 121
Msa0202090 MtrunA17_Chr3g0083591 23.735 889 504 34 61 870 66 859 1.13e-28 124
Msa0202090 MtrunA17_Chr3g0084811 24.275 828 486 34 121 870 280 1044 4.22e-28 122
Msa0202090 MtrunA17_Chr3g0091971 24.010 783 440 29 151 870 133 823 6.54e-28 121
Msa0202090 MtrunA17_Chr6g0468111 25.745 470 274 12 189 657 73 468 1.53e-27 117
Msa0202090 MtrunA17_Chr1g0149071 24.473 474 257 16 249 706 26 414 2.58e-27 116
Msa0202090 MtrunA17_Chr2g0282981 28.610 367 206 13 31 365 41 383 4.21e-27 115
Msa0202090 MtrunA17_Chr8g0338861 27.586 377 223 12 305 659 7 355 7.00e-27 117
Msa0202090 MtrunA17_Chr3g0083641 23.858 876 501 35 93 870 65 872 1.95e-26 117
Msa0202090 MtrunA17_Chr3g0085701 27.273 451 249 16 28 440 29 438 1.31e-25 114
Msa0202090 MtrunA17_Chr2g0323691 24.423 954 535 43 5 872 11 864 1.71e-25 114
Msa0202090 MtrunA17_Chr1g0189321 29.762 252 152 8 386 633 6 236 1.84e-25 106
Msa0202090 MtrunA17_Chr5g0414171 22.334 497 302 12 1 490 1 420 2.05e-25 110
Msa0202090 MtrunA17_Chr2g0309151 27.442 430 258 15 272 679 58 455 4.01e-25 110
Msa0202090 MtrunA17_Chr1g0167981 25.000 604 345 26 139 701 142 678 7.10e-25 112
Msa0202090 MtrunA17_Chr5g0410401 25.509 737 430 33 189 855 46 733 7.81e-25 111
Msa0202090 MtrunA17_Chr3g0082381 29.254 335 175 15 23 329 29 329 8.71e-25 106
Msa0202090 MtrunA17_Chr3g0100791 26.651 439 287 12 451 876 7 423 2.13e-24 107
Msa0202090 MtrunA17_Chr8g0360991 26.066 610 371 28 189 759 173 741 7.10e-24 108
Msa0202090 MtrunA17_Chr1g0146241 23.377 847 518 32 46 829 42 820 1.02e-23 108
Msa0202090 MtrunA17_Chr5g0417251 27.751 418 251 12 259 657 22 407 1.90e-23 106
Msa0202090 MtrunA17_Chr7g0248411 26.970 330 193 12 67 362 5 320 2.13e-23 102
Msa0202090 MtrunA17_Chr5g0444301 27.350 468 298 15 419 869 2 444 3.45e-23 103
Msa0202090 MtrunA17_Chr2g0308491 30.078 256 142 9 189 422 17 257 4.09e-23 99.8
Msa0202090 MtrunA17_Chr3g0086071 29.721 323 197 10 385 701 5 303 4.62e-23 105
Msa0202090 MtrunA17_Chr6g0469991 25.840 387 244 11 1 363 1 368 5.48e-23 102
Msa0202090 MtrunA17_Chr7g0255401 25.377 729 421 32 163 829 91 758 1.08e-22 105
Msa0202090 MtrunA17_Chr7g0255111 25.581 516 305 20 188 657 178 660 3.39e-22 103
Msa0202090 MtrunA17_Chr3g0087301 22.943 401 263 11 1 371 1 385 8.70e-22 102
Msa0202090 MtrunA17_Chr6g0468401 25.076 331 226 8 1 327 1 313 9.17e-22 97.8
Msa0202090 MtrunA17_Chr5g0414291 24.331 411 261 13 1 377 1 395 1.18e-21 99.0
Msa0202090 MtrunA17_Chr1g0189281 28.916 332 214 8 550 865 48 373 1.70e-21 97.8
Msa0202090 MtrunA17_Chr3g0107181 25.749 501 297 18 189 657 157 614 2.81e-21 100
Msa0202090 MtrunA17_Chr5g0416571 24.269 342 198 8 1 329 1 294 3.09e-21 96.3
Msa0202090 MtrunA17_Chr5g0410351 25.633 632 347 26 307 855 275 866 3.24e-21 100
Msa0202090 MtrunA17_Chr7g0257551 26.012 346 204 9 154 461 79 410 3.55e-21 97.4
Msa0202090 MtrunA17_Chr5g0410161 25.405 555 303 20 189 701 329 814 4.31e-21 99.8
Msa0202090 MtrunA17_Chr3g0082371 28.402 338 191 11 356 689 1 291 5.20e-21 97.4
Msa0202090 MtrunA17_Chr8g0355071 28.136 295 168 11 209 479 27 301 6.92e-21 94.4
Msa0202090 MtrunA17_Chr3g0096721 26.367 512 304 20 179 661 160 627 7.72e-21 99.0
Msa0202090 MtrunA17_Chr6g0474571 23.352 895 519 37 27 854 36 830 8.40e-21 99.4
Msa0202090 MtrunA17_Chr7g0229751 25.141 533 299 20 189 685 120 588 8.59e-21 98.6
Msa0202090 MtrunA17_Chr1g0172141 24.218 735 414 32 190 852 175 838 4.06e-20 96.7
Msa0202090 MtrunA17_Chr3g0101421 28.163 245 150 6 1 227 1 237 4.12e-20 91.7
Msa0202090 MtrunA17_Chr1g0164011 22.781 935 528 39 27 872 36 865 5.85e-20 96.3
Msa0202090 MtrunA17_Chr1g0174511 23.087 745 453 29 190 872 175 861 1.35e-19 95.1
Msa0202090 MtrunA17_Chr1g0163791 22.672 741 461 27 190 872 175 861 3.80e-19 93.6
Msa0202090 MtrunA17_Chr1g0197191 25.352 355 210 12 38 365 1 327 6.20e-19 89.4
Msa0202090 MtrunA17_Chr3g0091961 24.818 411 248 15 316 714 22 383 9.29e-19 89.7
Msa0202090 MtrunA17_Chr1g0163891 24.416 770 463 30 142 852 143 852 9.75e-19 92.4
Msa0202090 MtrunA17_Chr8g0359881 21.997 741 412 30 27 701 36 676 1.14e-18 91.3
Msa0202090 MtrunA17_Chr6g0468201 27.273 286 176 6 397 682 3 256 1.26e-18 91.3
Msa0202090 MtrunA17_Chr3g0105571 25.478 471 289 18 189 633 119 553 2.23e-18 90.1
Msa0202090 MtrunA17_Chr1g0172111 23.810 735 403 36 27 701 36 673 2.26e-18 90.5
Msa0202090 MtrunA17_Chr3g0100721 26.906 223 148 4 1 213 1 218 5.73e-18 84.0
Msa0202090 MtrunA17_Chr3g0101361 29.630 270 163 9 26 273 36 300 5.82e-18 89.0
Msa0202090 MtrunA17_Chr3g0101361 25.102 490 300 15 448 894 299 764 7.87e-18 88.6
Msa0202090 MtrunA17_Chr1g0172271 24.199 562 315 25 190 698 176 679 6.28e-18 89.0
Msa0202090 MtrunA17_Chr3g0105521 23.640 478 298 16 179 633 46 479 9.29e-18 89.0
Msa0202090 MtrunA17_Chr1g0172051 23.153 907 513 43 27 852 36 839 1.04e-17 89.0
Msa0202090 MtrunA17_Chr3g0096821 25.845 503 299 19 189 657 163 625 1.18e-17 88.6
Msa0202090 MtrunA17_Chr1g0169941 26.054 261 151 8 263 501 45 285 1.57e-17 85.1
Msa0202090 MtrunA17_Chr1g0170881 22.826 736 413 32 27 701 36 677 2.00e-17 88.2
Msa0202090 MtrunA17_Chr3g0100261 22.889 533 315 16 183 657 167 661 3.03e-17 87.4
Msa0202090 MtrunA17_Chr3g0105551 26.524 328 194 11 189 493 165 468 3.10e-17 87.4
Msa0202090 MtrunA17_Chr4g0010491 25.499 451 279 13 1 422 1 423 6.07e-17 84.3
Msa0202090 MtrunA17_Chr1g0153981 26.220 328 208 10 189 502 205 512 6.48e-17 85.9
Msa0202090 MtrunA17_Chr3g0101341 27.344 256 130 6 23 242 1 236 6.53e-17 82.0
Msa0202090 MtrunA17_Chr8g0342641 23.853 763 453 29 163 879 186 866 6.60e-17 86.3
Msa0202090 MtrunA17_Chr4g0010711 24.440 491 250 21 166 619 696 1102 7.11e-17 86.3
Msa0202090 MtrunA17_Chr8g0363851 25.186 806 452 35 160 869 2 752 7.20e-17 85.9
Msa0202090 MtrunA17_Chr2g0298291 27.758 281 149 11 163 419 192 442 1.77e-16 84.7
Msa0202090 MtrunA17_Chr1g0163931 22.055 730 436 27 190 852 176 839 1.79e-16 85.1
Msa0202090 MtrunA17_Chr3g0085421 30.660 212 124 8 121 320 45 245 2.02e-16 80.1
Msa0202090 MtrunA17_Chr3g0105481 23.933 539 329 18 189 682 119 621 2.21e-16 84.7
Msa0202090 MtrunA17_Chr3g0096971 30.723 166 84 5 271 412 16 174 2.81e-16 77.8
Msa0202090 MtrunA17_Chr3g0101351 30.000 260 127 11 17 242 28 266 3.22e-16 80.1
Msa0202090 MtrunA17_Chr1g0163761 21.528 720 443 27 27 698 36 681 3.41e-16 84.0
Msa0202090 MtrunA17_Chr2g0299131 27.155 232 128 8 161 363 1 220 3.41e-16 78.6
Msa0202090 MtrunA17_Chr6g0470001 28.522 291 172 8 397 682 3 262 3.50e-16 83.2
Msa0202090 MtrunA17_Chr1g0160951 24.800 500 301 22 189 657 69 524 3.65e-16 84.0
Msa0202090 MtrunA17_Chr3g0085721 24.084 382 230 14 29 387 33 377 5.31e-16 80.9
Msa0202090 MtrunA17_Chr3g0105621 26.844 339 196 13 179 493 112 422 5.73e-16 82.0
Msa0202090 MtrunA17_Chr7g0257261 23.913 230 163 3 5 226 9 234 6.21e-16 79.3
Msa0202090 MtrunA17_Chr7g0257251 32.593 135 84 2 340 474 41 168 7.57e-16 76.6
Msa0202090 MtrunA17_Chr8g0338681 32.075 212 100 8 272 457 47 240 7.80e-16 78.2
Msa0202090 MtrunA17_Chr5g0410261 25.000 564 328 25 343 851 358 881 1.05e-15 82.0
Msa0202090 MtrunA17_Chr3g0085731 27.252 433 228 21 101 493 121 506 2.13e-15 81.3
Msa0202090 MtrunA17_Chr3g0081201 29.808 208 140 3 698 899 2 209 2.22e-15 76.6
Msa0202090 MtrunA17_Chr6g0475721 23.333 630 341 28 106 672 104 654 2.51e-15 80.5
Msa0202090 MtrunA17_Chr5g0443761 23.150 527 311 18 189 657 33 523 2.54e-15 80.9
Msa0202090 MtrunA17_Chr8g0344071 33.835 133 87 1 744 876 1017 1148 3.44e-15 80.5
Msa0202090 MtrunA17_Chr7g0220981 25.342 292 172 8 189 456 55 324 4.82e-15 78.6
Msa0202090 MtrunA17_Chr3g0080701 30.734 218 136 8 1 204 1 217 4.97e-15 75.9
Msa0202090 MtrunA17_Chr5g0439121 24.380 484 278 21 189 619 173 621 9.49e-15 79.3
Msa0202090 MtrunA17_Chr8g0338981 25.310 565 282 23 183 710 202 663 1.01e-14 79.0
Msa0202090 MtrunA17_Chr8g0392511 27.178 287 173 11 430 703 1 264 1.06e-14 76.6
Msa0202090 MtrunA17_Chr3g0108821 25.449 334 203 13 179 492 161 468 1.13e-14 79.0
Msa0202090 MtrunA17_Chr5g0414911 22.869 704 414 28 188 829 180 816 1.65e-14 78.6
Msa0202090 MtrunA17_Chr3g0101171 32.727 110 69 1 407 516 5 109 2.36e-14 70.1
Msa0202090 MtrunA17_Chr4g0005591 24.247 598 325 22 161 704 250 773 3.09e-14 77.4
Msa0202090 MtrunA17_Chr7g0221061 22.314 605 367 20 114 655 204 768 3.32e-14 77.0
Msa0202090 MtrunA17_Chr4g0009041 22.078 693 375 28 73 689 627 1230 3.42e-14 77.4
Msa0202090 MtrunA17_Chr1g0163861 24.022 358 205 15 190 518 176 495 3.71e-14 76.6
Msa0202090 MtrunA17_Chr3g0108811 25.150 334 200 13 181 492 175 480 4.54e-14 77.0
Msa0202090 MtrunA17_Chr8g0343671 26.761 284 152 10 165 419 229 485 5.62e-14 76.6
Msa0202090 MtrunA17_Chr3g0102271 22.903 751 454 30 151 869 182 839 5.68e-14 76.6
Msa0202090 MtrunA17_Chr7g0255681 27.402 281 149 12 166 417 691 945 6.75e-14 76.6
Msa0202090 MtrunA17_Chr7g0255681 23.721 430 229 21 111 493 1123 1500 3.00e-13 74.3
Msa0202090 MtrunA17_Chr7g0255681 26.214 309 170 14 145 417 157 443 2.46e-11 68.2
Msa0202090 MtrunA17_Chr3g0091861 25.648 347 210 12 169 493 92 412 6.89e-14 76.6
Msa0202090 MtrunA17_Chr6g0468361 26.403 303 195 7 397 699 3 277 8.13e-14 75.1
Msa0202090 MtrunA17_Chr1g0153991 21.922 593 342 23 200 700 213 776 1.32e-13 75.1
Msa0202090 MtrunA17_Chr4g0005291 27.322 366 193 18 104 431 181 511 1.32e-13 75.5
Msa0202090 MtrunA17_Chr1g0163831 24.390 328 199 13 190 496 175 474 1.45e-13 74.3
Msa0202090 MtrunA17_Chr6g0468191 22.870 223 163 5 1 222 1 215 1.49e-13 72.0
Msa0202090 MtrunA17_Chr8g0392521 27.083 288 177 10 45 317 21 290 1.67e-13 72.8
Msa0202090 MtrunA17_Chr3g0084361 28.226 248 161 5 673 903 5 252 1.97e-13 71.6
Msa0202090 MtrunA17_Chr5g0402671 22.309 511 310 19 29 503 36 495 2.04e-13 74.7
Msa0202090 MtrunA17_Chr3g0108151 24.848 330 201 12 189 492 169 477 2.48e-13 74.7
Msa0202090 MtrunA17_Chr6g0455211 23.050 577 309 24 161 705 223 696 2.69e-13 74.3
Msa0202090 MtrunA17_Chr2g0299881 25.596 629 355 27 134 687 165 755 4.02e-13 73.9
Msa0202090 MtrunA17_Chr7g0223531 29.050 358 182 19 161 493 192 502 5.27e-13 73.6
Msa0202090 MtrunA17_Chr5g0402771 23.958 384 239 16 151 506 147 505 5.96e-13 73.2
Msa0202090 MtrunA17_Chr3g0107621 25.143 350 214 12 174 501 157 480 6.06e-13 72.4
Msa0202090 MtrunA17_Chr8g0343631 26.644 289 146 11 165 419 206 462 6.15e-13 73.2
Msa0202090 MtrunA17_Chr6g0455131 23.810 567 303 26 189 703 293 782 6.44e-13 73.2
Msa0202090 MtrunA17_Chr1g0164091 22.025 731 432 32 27 701 36 684 7.29e-13 72.8
Msa0202090 MtrunA17_Chr6g0480311 22.771 628 354 26 166 712 185 762 7.56e-13 72.8
Msa0202090 MtrunA17_Chr3g0085541 27.809 356 184 18 163 493 198 505 7.80e-13 72.4
Msa0202090 MtrunA17_Chr3g0114401 26.243 362 188 19 161 493 62 373 8.61e-13 72.0
Msa0202090 MtrunA17_Chr5g0420331 24.503 604 309 29 161 703 182 699 8.71e-13 72.8
Msa0202090 MtrunA17_Chr3g0097031 25.148 338 204 14 179 492 110 422 1.31e-12 71.6
Msa0202090 MtrunA17_Chr8g0338901 26.283 487 252 20 182 639 223 631 1.37e-12 72.0
Msa0202090 MtrunA17_Chr7g0257601 24.519 208 148 4 20 223 24 226 1.56e-12 68.2
Msa0202090 MtrunA17_Chr2g0299841 25.206 607 349 27 151 679 219 798 1.60e-12 71.6
Msa0202090 MtrunA17_Chr1g0172171 22.286 525 308 26 27 518 36 493 2.17e-12 70.9
Msa0202090 MtrunA17_Chr3g0102281 22.721 735 439 28 165 865 195 834 2.89e-12 70.9
Msa0202090 MtrunA17_Chr6g0455191 22.796 658 369 29 79 705 411 960 4.54e-12 70.5
Msa0202090 MtrunA17_Chr7g0223931 22.691 498 309 17 195 657 1 457 4.88e-12 69.7
Msa0202090 MtrunA17_Chr3g0102171 22.463 739 444 29 165 869 195 838 5.78e-12 70.1
Msa0202090 MtrunA17_Chr6g0454821 23.888 427 226 18 189 588 250 604 6.98e-12 69.7
Msa0202090 MtrunA17_Chr2g0313591 22.021 940 558 36 1 870 7 841 7.03e-12 69.7
Msa0202090 MtrunA17_Chr4g0009171 24.054 370 205 14 161 502 904 1225 7.92e-12 69.7
Msa0202090 MtrunA17_Chr7g0221171 25.784 287 154 10 189 441 229 490 8.96e-12 69.3
Msa0202090 MtrunA17_Chr5g0402721 23.913 368 225 17 162 503 145 483 9.97e-12 68.9
Msa0202090 MtrunA17_Chr6g0454971 25.069 363 191 16 161 493 221 532 1.01e-11 69.3
Msa0202090 MtrunA17_Chr4g0005871 23.632 457 249 16 161 589 306 690 1.12e-11 68.9
Msa0202090 MtrunA17_Chr3g0081941 22.459 797 462 36 189 898 165 892 1.37e-11 68.9
Msa0202090 MtrunA17_Chr2g0299811 24.696 575 344 25 151 660 25 575 1.53e-11 68.6
Msa0202090 MtrunA17_Chr8g0372681 25.049 515 283 25 188 659 213 667 1.60e-11 68.6
Msa0202090 MtrunA17_Chr3g0108011 24.624 532 317 23 179 663 197 691 1.62e-11 68.6
Msa0202090 MtrunA17_Chr4g0005891 22.635 592 335 25 161 703 221 738 2.08e-11 68.2
Msa0202090 MtrunA17_Chr3g0097641 25.763 295 178 10 181 455 137 410 2.25e-11 68.2
Msa0202090 MtrunA17_Chr3g0107961 24.528 318 197 12 195 492 1 295 2.39e-11 67.0
Msa0202090 MtrunA17_Chr3g0081841 27.014 211 128 6 159 348 4 209 2.48e-11 67.0
Msa0202090 MtrunA17_Chr5g0415481 26.754 228 146 5 430 657 6 212 2.71e-11 67.0
Msa0202090 MtrunA17_Chr2g0313481 21.546 427 263 16 23 419 25 409 2.89e-11 67.8
Msa0202090 MtrunA17_Chr1g0189511 28.659 164 104 5 337 496 7 161 3.24e-11 65.1
Msa0202090 MtrunA17_Chr8g0343611 26.761 284 152 11 165 419 21 277 3.67e-11 66.6
Msa0202090 MtrunA17_Chr5g0420341 24.826 576 312 26 161 685 182 687 3.75e-11 67.4
Msa0202090 MtrunA17_Chr5g0430531 27.660 235 139 9 161 374 183 407 3.85e-11 66.2
Msa0202090 MtrunA17_Chr7g0234891 26.006 323 175 16 138 419 64 363 4.70e-11 65.9
Msa0202090 MtrunA17_Chr6g0455221 23.836 537 278 22 184 680 209 654 5.01e-11 67.0
Msa0202090 MtrunA17_Chr4g0005391 26.531 294 162 13 165 431 235 501 5.53e-11 66.6
Msa0202090 MtrunA17_Chr5g0402681 24.235 392 247 17 136 503 117 482 5.64e-11 66.6
Msa0202090 MtrunA17_Chr8g0342131 23.387 496 288 22 188 648 218 656 5.81e-11 66.6
Msa0202090 MtrunA17_Chr8g0343801 25.356 351 194 16 166 493 192 497 6.04e-11 66.2
Msa0202090 MtrunA17_Chr2g0299791 25.429 641 358 29 134 698 161 757 7.82e-11 66.2
Msa0202090 MtrunA17_Chr6g0454951 22.976 457 252 17 161 589 267 651 9.70e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0202090 AT1G50180.1 37.566 945 458 19 1 902 1 856 0.0 580
Msa0202090 AT5G35450.2 35.646 937 527 21 1 902 1 896 2.70e-172 523
Msa0202090 AT5G35450.1 35.646 937 527 21 1 902 1 896 2.70e-172 523
Msa0202090 AT1G53350.1 34.741 947 533 19 1 903 1 906 5.41e-167 510
Msa0202090 AT5G43470.3 35.775 942 530 20 1 902 1 907 1.06e-166 509
Msa0202090 AT5G43470.2 35.775 942 530 20 1 902 1 907 1.06e-166 509
Msa0202090 AT5G43470.4 35.775 942 530 20 1 902 1 907 1.06e-166 509
Msa0202090 AT5G43470.1 35.775 942 530 20 1 902 1 907 1.06e-166 509
Msa0202090 AT1G58400.3 34.076 942 540 19 1 898 1 905 1.45e-165 506
Msa0202090 AT1G58400.2 34.076 942 540 19 1 898 1 905 1.45e-165 506
Msa0202090 AT5G48620.6 35.132 945 532 20 1 902 1 907 7.90e-165 504
Msa0202090 AT5G48620.1 35.132 945 532 20 1 902 1 907 7.90e-165 504
Msa0202090 AT5G48620.4 35.132 945 532 20 1 902 1 907 7.90e-165 504
Msa0202090 AT5G48620.2 35.132 945 532 20 1 902 1 907 7.90e-165 504
Msa0202090 AT5G48620.3 35.132 945 532 20 1 902 1 907 7.90e-165 504
Msa0202090 AT5G48620.5 35.132 945 532 20 1 902 1 907 7.90e-165 504
Msa0202090 AT1G58400.1 33.981 927 551 18 1 898 1 895 1.17e-162 498
Msa0202090 AT1G58390.1 35.069 941 528 22 1 898 1 901 1.76e-162 498
Msa0202090 AT1G58390.2 35.069 941 528 22 1 898 1 901 1.76e-162 498
Msa0202090 AT1G58410.1 35.408 932 527 22 5 898 3 897 7.25e-157 483
Msa0202090 AT1G58410.4 35.408 932 527 22 5 898 3 897 7.25e-157 483
Msa0202090 AT1G58410.2 35.408 932 527 22 5 898 3 897 7.25e-157 483
Msa0202090 AT1G59780.2 34.157 931 534 18 1 900 1 883 6.17e-154 476
Msa0202090 AT1G59780.1 34.157 931 534 18 1 900 6 888 9.24e-154 476
Msa0202090 AT1G59218.1 35.347 894 516 20 1 857 1 869 1.98e-147 463
Msa0202090 AT1G59218.1 27.978 361 182 12 602 898 702 1048 4.06e-21 100
Msa0202090 AT1G59218.2 35.347 894 516 20 1 857 1 869 1.98e-147 463
Msa0202090 AT1G59218.2 27.978 361 182 12 602 898 702 1048 4.06e-21 100
Msa0202090 AT1G59218.3 35.347 894 516 20 1 857 1 869 1.98e-147 463
Msa0202090 AT1G59218.3 27.978 361 182 12 602 898 702 1048 4.06e-21 100
Msa0202090 AT1G58848.1 35.347 894 516 20 1 857 1 869 1.98e-147 463
Msa0202090 AT1G58848.1 27.978 361 182 12 602 898 702 1048 4.06e-21 100
Msa0202090 AT1G58848.2 35.347 894 516 20 1 857 1 869 1.98e-147 463
Msa0202090 AT1G58848.2 27.978 361 182 12 602 898 702 1048 4.06e-21 100
Msa0202090 AT1G59124.2 35.050 893 512 19 1 857 1 861 1.73e-140 444
Msa0202090 AT1G59124.2 38.776 147 86 2 754 900 855 997 2.35e-22 103
Msa0202090 AT1G58807.1 35.050 893 512 19 1 857 1 861 1.73e-140 444
Msa0202090 AT1G58807.1 38.776 147 86 2 754 900 855 997 2.35e-22 103
Msa0202090 AT1G58410.3 33.620 931 513 21 5 898 3 865 3.24e-139 436
Msa0202090 AT1G59124.1 35.074 881 504 20 1 845 1 849 1.56e-138 434
Msa0202090 AT1G58807.2 35.074 881 504 20 1 845 1 849 1.56e-138 434
Msa0202090 AT1G58602.2 34.365 905 508 20 1 857 1 867 3.55e-132 425
Msa0202090 AT1G58602.2 30.409 342 192 15 564 898 834 1136 7.98e-18 89.4
Msa0202090 AT1G58602.1 34.365 905 508 20 1 857 1 867 3.55e-132 425
Msa0202090 AT1G58602.1 30.409 342 192 15 564 898 834 1136 7.98e-18 89.4
Msa0202090 AT1G10920.1 35.238 735 392 20 130 815 1 700 2.95e-115 369
Msa0202090 AT1G10920.2 35.238 735 392 20 130 815 1 700 2.95e-115 369
Msa0202090 AT1G10920.4 35.238 735 392 20 130 815 1 700 2.95e-115 369
Msa0202090 AT1G59620.2 33.628 791 431 21 145 898 6 739 1.32e-108 352
Msa0202090 AT3G46710.1 31.362 896 526 27 1 859 1 844 1.91e-108 354
Msa0202090 AT3G46530.1 31.982 888 515 25 1 859 1 828 3.23e-106 348
Msa0202090 AT3G46730.1 31.793 909 502 27 1 859 1 841 1.96e-100 333
Msa0202090 AT1G10920.5 35.986 553 287 14 307 815 1 530 2.54e-78 265
Msa0202090 AT1G10920.3 35.986 553 287 14 307 815 1 530 2.54e-78 265
Msa0202090 AT3G07040.1 26.371 948 607 29 1 896 1 909 7.56e-77 270
Msa0202090 AT3G50950.2 26.357 903 541 32 1 852 1 830 4.82e-67 241
Msa0202090 AT3G50950.1 26.357 903 541 32 1 852 1 830 4.82e-67 241
Msa0202090 AT3G14470.1 25.493 710 441 21 31 701 39 699 5.88e-43 170
Msa0202090 AT3G14470.2 25.493 710 441 21 31 701 39 699 5.88e-43 170
Msa0202090 AT3G14460.1 24.672 916 524 37 31 851 36 880 2.93e-41 165
Msa0202090 AT1G12220.1 22.384 688 433 21 7 653 12 639 4.41e-30 128
Msa0202090 AT1G12220.2 22.384 688 433 21 7 653 12 639 4.41e-30 128
Msa0202090 AT1G12280.1 26.559 497 309 18 161 633 153 617 8.37e-30 127
Msa0202090 AT4G26090.1 26.273 609 355 24 130 703 123 672 9.86e-30 127
Msa0202090 AT1G12220.3 25.610 492 315 15 186 653 54 518 1.63e-29 126
Msa0202090 AT1G63350.4 22.864 866 553 26 7 833 10 799 5.87e-29 125
Msa0202090 AT5G43730.4 26.182 550 326 19 166 679 154 659 8.13e-29 124
Msa0202090 AT5G43730.1 26.182 550 326 19 166 679 154 659 8.13e-29 124
Msa0202090 AT5G43730.3 26.182 550 326 19 166 679 154 659 8.13e-29 124
Msa0202090 AT5G43730.2 26.182 550 326 19 166 679 154 659 8.13e-29 124
Msa0202090 AT5G43730.5 26.182 550 326 19 166 679 154 659 8.13e-29 124
Msa0202090 AT5G63020.1 25.000 772 440 32 189 896 176 872 8.51e-29 124
Msa0202090 AT1G61180.1 27.178 482 276 19 186 633 171 611 1.05e-26 117
Msa0202090 AT1G61300.1 27.409 467 260 19 189 619 63 486 1.05e-26 117
Msa0202090 AT1G61180.2 26.721 494 287 19 186 645 171 623 1.21e-26 117
Msa0202090 AT1G61190.1 23.178 686 395 27 7 633 3 615 2.12e-26 117
Msa0202090 AT1G61190.2 23.178 686 395 27 7 633 3 615 3.40e-26 116
Msa0202090 AT1G61190.3 23.178 686 395 27 7 633 3 615 3.40e-26 116
Msa0202090 AT4G27190.1 25.524 525 315 22 190 679 167 650 4.65e-26 115
Msa0202090 AT1G63350.1 22.822 907 559 29 7 855 10 833 7.48e-26 115
Msa0202090 AT1G63350.3 22.822 907 559 29 7 855 10 833 8.01e-26 115
Msa0202090 AT1G63350.2 22.822 907 559 29 7 855 10 833 8.01e-26 115
Msa0202090 AT1G61310.1 26.749 486 284 17 186 633 173 624 9.61e-26 114
Msa0202090 AT4G27220.1 26.638 473 280 22 190 633 137 571 1.08e-25 114
Msa0202090 AT4G27220.2 26.638 473 280 22 190 633 145 579 1.28e-25 114
Msa0202090 AT1G61190.4 22.861 678 382 26 7 633 3 590 1.95e-25 114
Msa0202090 AT1G61300.2 27.015 459 247 19 189 619 63 461 2.28e-25 113
Msa0202090 AT1G51480.1 25.709 529 323 19 184 679 170 661 6.19e-25 112
Msa0202090 AT5G47250.1 24.286 490 310 16 188 652 177 630 2.07e-24 110
Msa0202090 AT4G10780.2 25.000 500 314 17 161 633 150 615 3.57e-24 109
Msa0202090 AT4G10780.1 25.000 500 314 17 161 633 150 615 4.12e-24 109
Msa0202090 AT1G12210.1 24.444 495 322 14 161 633 153 617 8.41e-24 108
Msa0202090 AT1G12210.3 24.444 495 322 14 161 633 111 575 8.68e-24 108
Msa0202090 AT1G12210.2 24.444 495 322 14 161 633 111 575 8.68e-24 108
Msa0202090 AT1G63360.1 26.287 719 403 30 199 855 184 837 2.55e-23 107
Msa0202090 AT1G63360.2 26.287 719 403 30 199 855 149 802 2.98e-23 106
Msa0202090 AT1G62630.1 22.642 954 597 34 7 899 10 883 5.36e-23 105
Msa0202090 AT5G05400.1 23.165 613 376 24 65 633 43 604 5.76e-23 105
Msa0202090 AT1G27180.3 24.535 807 481 32 155 888 190 941 1.07e-22 105
Msa0202090 AT5G05400.2 25.210 476 283 19 186 633 5 435 1.10e-22 104
Msa0202090 AT5G05400.3 25.210 476 283 19 186 633 5 435 1.10e-22 104
Msa0202090 AT1G27180.5 24.535 807 481 32 155 888 188 939 1.14e-22 105
Msa0202090 AT1G27180.8 24.535 807 481 32 155 888 188 939 1.14e-22 105
Msa0202090 AT1G15890.1 21.850 508 314 16 24 495 22 482 1.29e-22 104
Msa0202090 AT1G27180.2 24.535 807 481 32 155 888 190 941 1.41e-22 105
Msa0202090 AT1G27180.1 24.535 807 481 32 155 888 352 1103 1.52e-22 105
Msa0202090 AT1G27180.7 24.535 807 481 32 155 888 14 765 1.66e-22 104
Msa0202090 AT1G27180.6 24.535 807 481 32 155 888 14 765 1.66e-22 104
Msa0202090 AT1G27180.4 24.535 807 481 32 155 888 14 765 1.66e-22 104
Msa0202090 AT1G12290.1 25.635 394 236 13 125 493 124 485 5.89e-21 99.4
Msa0202090 AT1G12290.4 25.635 394 236 13 125 493 82 443 6.40e-21 99.4
Msa0202090 AT1G12290.3 25.635 394 236 13 125 493 82 443 6.40e-21 99.4
Msa0202090 AT1G12290.2 25.635 394 236 13 125 493 82 443 6.40e-21 99.4
Msa0202090 AT1G15890.2 26.140 329 201 10 188 495 15 322 1.32e-20 97.8
Msa0202090 AT1G27170.1 24.837 765 435 31 161 869 185 865 8.95e-20 95.9
Msa0202090 AT1G27170.2 24.837 765 435 31 161 869 185 865 1.04e-19 95.9
Msa0202090 AT1G12280.2 23.790 496 291 18 161 633 115 546 4.44e-18 90.1
Msa0202090 AT5G47260.1 25.458 491 308 17 190 660 172 624 2.44e-17 87.8
Msa0202090 AT5G46260.1 23.289 760 433 31 163 864 180 847 1.50e-13 75.5
Msa0202090 AT2G14080.2 24.121 796 438 36 175 895 113 817 1.87e-13 75.5
Msa0202090 AT2G14080.1 24.121 796 438 36 175 895 246 950 2.00e-13 75.1
Msa0202090 AT1G69550.1 33.447 293 166 12 580 856 934 1213 7.17e-13 73.6
Msa0202090 AT1G69550.1 29.907 321 190 10 580 869 886 1202 1.26e-12 72.8
Msa0202090 AT1G33560.1 26.235 324 179 12 189 495 188 468 4.29e-12 70.5
Msa0202090 AT5G66910.1 22.781 597 340 25 165 676 172 732 1.72e-11 68.6
Msa0202090 AT1G52660.2 23.913 230 144 7 162 371 138 356 1.94e-11 67.4
Msa0202090 AT1G52660.1 23.913 230 144 7 162 371 138 356 2.04e-11 67.4
Msa0202090 AT3G15700.2 23.810 231 143 8 162 371 138 356 5.64e-11 65.9
Msa0202090 AT3G15700.1 23.881 268 158 10 128 371 111 356 5.92e-11 65.9

Find 153 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGCAAAATTGTTGCTATT+TGG 0.157710 2_1:-24102004 Msa0202090:CDS
TTTAAATTTCCTATTGAATT+TGG 0.169236 2_1:+24099554 None:intergenic
TGGAGAAGCTACCAAATTTA+AGG 0.178671 2_1:-24099055 Msa0202090:CDS
ACTAACCAATTTAAGAAAAT+TGG 0.182414 2_1:-24099327 Msa0202090:CDS
CAGCACAGAGATGGAGAAAT+TGG 0.191096 2_1:-24100410 Msa0202090:CDS
CCATGTTCTTATAAGCTTCT+TGG 0.197850 2_1:+24100129 None:intergenic
GTGCAAAATTGTTGCTATTT+GGG 0.221241 2_1:-24102003 Msa0202090:CDS
GGAAAATTACCTAAAGAAAT+TGG 0.229038 2_1:-24099632 Msa0202090:CDS
AACTCAAGCAACCTTAAATT+TGG 0.242420 2_1:+24099044 None:intergenic
TTAGACTTAGAAACCTTAAA+TGG 0.244428 2_1:+24099600 None:intergenic
TTTGGTTGATAACAACAATA+AGG 0.254986 2_1:-24102027 Msa0202090:CDS
TTGAAGATATCGCCATAATT+AGG 0.265050 2_1:+24099293 None:intergenic
TCCATGTTTCCTATGACATT+TGG 0.275517 2_1:+24099482 None:intergenic
GGTTGTGGAAGATTACTTAT+TGG 0.285305 2_1:+24099152 None:intergenic
GATGAAGCTGTGTTCTTATA+TGG 0.287208 2_1:-24102506 Msa0202090:CDS
AAGTTGATGCTATCATTTCT+AGG 0.289311 2_1:-24102217 Msa0202090:CDS
GTTATTGAAGAGGATATAAT+TGG 0.295396 2_1:-24102083 Msa0202090:CDS
ATGCCATTGCCACATGATTC+AGG 0.297499 2_1:+24099437 None:intergenic
CTTACAAACCTAATCTCTTC+TGG 0.298260 2_1:+24098846 None:intergenic
TTTGACATTGAATTCCTTCC+AGG 0.301272 2_1:+24099657 None:intergenic
AGTTCAACATGTTCCATCTT+TGG 0.301787 2_1:-24098742 Msa0202090:CDS
GTAATAGATGATCCTAATTA+TGG 0.302008 2_1:-24099305 Msa0202090:CDS
ATTGTCAAGCAAGGGATGTT+TGG 0.308954 2_1:-24101878 Msa0202090:CDS
TGTAAGTAGTCTTAAGGATT+TGG 0.313377 2_1:-24098829 Msa0202090:CDS
TGAAAATGATGTTAATGTTT+TGG 0.316818 2_1:-24102057 Msa0202090:CDS
TGGTAGTTCTTGATGATATT+TGG 0.317404 2_1:-24101737 Msa0202090:CDS
TAATCTTGAACAGTGGAAAT+TGG 0.318464 2_1:-24098934 Msa0202090:CDS
AAGCTCAAATTACAAGGTTC+TGG 0.323575 2_1:-24099104 Msa0202090:CDS
TCTTCTCTTAACTCTTTAGA+AGG 0.327774 2_1:+24101828 None:intergenic
AAAGGCAAAGAACAACTTCT+AGG 0.334187 2_1:-24100253 Msa0202090:CDS
TAGTCCTCCAAGGACAATTA+TGG 0.334714 2_1:+24100348 None:intergenic
ATTTGGGGTATGGGAGGTTT+AGG 0.340855 2_1:-24101987 Msa0202090:CDS
CATTGAAAGGTGTATGATTC+AGG 0.342115 2_1:-24100017 Msa0202090:CDS
AATTTCCTGTGAGTAGGTCT+AGG 0.350092 2_1:+24099519 None:intergenic
AAGATGAATCTCTCAAGAAT+TGG 0.362537 2_1:-24102400 Msa0202090:CDS
AAAATCTTAGAACTGAATTA+AGG 0.363148 2_1:-24102466 Msa0202090:CDS
ATGTGTAGCTTGTAAAGATT+AGG 0.369893 2_1:+24099182 None:intergenic
AGCTTCTCCAATGTTGTCAT+TGG 0.374532 2_1:+24099068 None:intergenic
TAGGTTTGTAAGTAGTCTTA+AGG 0.378343 2_1:-24098835 Msa0202090:CDS
TGTACTGTGAAGTCTACTAT+TGG 0.382435 2_1:+24102551 None:intergenic
GAGGGACCTATGTGTGTCTA+AGG 0.384852 2_1:-24099939 Msa0202090:CDS
ACAGACAATGATCTCTCATT+TGG 0.384962 2_1:+24101678 None:intergenic
TTGGTTGATAACAACAATAA+GGG 0.386472 2_1:-24102026 Msa0202090:CDS
TTGTCAAGCAAGGGATGTTT+GGG 0.386630 2_1:-24101877 Msa0202090:CDS
CTTTACAAGCTACACATAGA+AGG 0.389908 2_1:-24099176 Msa0202090:CDS
GGAAGGAATTCAATGTCAAA+TGG 0.396938 2_1:-24099654 Msa0202090:CDS
ACCAGTCGGTCTTGCTTTCG+AGG 0.397973 2_1:+24099859 None:intergenic
CCTCTAGCCATAATTGTCCT+TGG 0.399980 2_1:-24100355 Msa0202090:CDS
AGGTTGTTCCAGAAGAGATT+AGG 0.402664 2_1:-24098854 Msa0202090:CDS
TTCTTGACATTATTGATTCG+AGG 0.404713 2_1:-24099901 Msa0202090:CDS
AATTGTTGCTATTTGGGGTA+TGG 0.405179 2_1:-24101997 Msa0202090:CDS
GATGAACTGCCAAATTCAAT+AGG 0.406712 2_1:-24099563 Msa0202090:CDS
GTGGTTGAAAAGAGTTCAAC+AGG 0.424214 2_1:-24099995 Msa0202090:CDS
TCAGTTCTTGATGTTTCTGC+AGG 0.428328 2_1:-24099209 Msa0202090:CDS
ACCTGTCATGTTTCTTCTTG+AGG 0.429591 2_1:+24102310 None:intergenic
ATATTTGGAGTGTAGGTACT+TGG 0.430947 2_1:-24101722 Msa0202090:CDS
TATATCATAGTACTAAAGTT+AGG 0.435471 2_1:-24101941 Msa0202090:CDS
TTTACATCACATTTCTCAGC+AGG 0.435836 2_1:+24099362 None:intergenic
TGTGACTATTAGAATTAGAA+TGG 0.438087 2_1:-24098708 Msa0202090:exon
TCAAGTGGAGAAGAAGTGTT+TGG 0.444195 2_1:-24101757 Msa0202090:CDS
TTTAGAATTAAGCTTGAGAA+AGG 0.445137 2_1:-24098783 Msa0202090:CDS
ATTGTTGCTATTTGGGGTAT+GGG 0.445735 2_1:-24101996 Msa0202090:CDS
GTTCAAATACCAAATGTCAT+AGG 0.447234 2_1:-24099491 Msa0202090:CDS
TGTGAAGTCTACTATTGGTT+TGG 0.450445 2_1:+24102556 None:intergenic
GATTGCGTTATATCTTGATC+AGG 0.455140 2_1:-24099825 Msa0202090:CDS
TACCGAGGTTGCAATGCATA+TGG 0.458242 2_1:-24101622 Msa0202090:CDS
GGAGAAATTGGGAAGAGAAA+TGG 0.458704 2_1:-24100398 Msa0202090:CDS
TAGAACTGAATTAAGGATGA+TGG 0.459901 2_1:-24102459 Msa0202090:CDS
CTTGATGATATTTGGAGTGT+AGG 0.459939 2_1:-24101729 Msa0202090:CDS
GGTTTGTTTCAATTATCAAC+AGG 0.462586 2_1:-24102268 Msa0202090:CDS
GAAGGAATTCAATGTCAAAT+GGG 0.473678 2_1:-24099653 Msa0202090:CDS
GAGAGATCATTGTCTGTTGT+TGG 0.473772 2_1:-24101672 Msa0202090:CDS
ATTTCCTGTGAGTAGGTCTA+GGG 0.476168 2_1:+24099520 None:intergenic
TTAATAGAAATTCATCAAGT+AGG 0.479719 2_1:-24102245 Msa0202090:CDS
CTTGCTAAGCTCAAATTACA+AGG 0.481139 2_1:-24099110 Msa0202090:CDS
CAAATGGTTTGTTCAAGCAA+AGG 0.482538 2_1:-24098996 Msa0202090:CDS
AGAGAAATGGTTGGAAGATG+TGG 0.493518 2_1:-24100385 Msa0202090:CDS
TTCAAATTGTACTAAGCTTG+AGG 0.496396 2_1:-24098874 Msa0202090:CDS
GTAAAATATTGCTTACTACT+AGG 0.498548 2_1:-24101647 Msa0202090:CDS
CCAAGAAGCTTATAAGAACA+TGG 0.501642 2_1:-24100129 Msa0202090:CDS
AAAGGTGCTATGTGTTGTCT+TGG 0.502380 2_1:-24098909 Msa0202090:CDS
CAGGGAAATGTGCTAAGTGT+AGG 0.502512 2_1:+24100170 None:intergenic
CAGTAACGAAATACCAAAGA+TGG 0.502701 2_1:+24098729 None:intergenic
AAGGCAAAGAACAACTTCTA+GGG 0.505301 2_1:-24100252 Msa0202090:CDS
GTACCTTAAACAGAATCAAA+AGG 0.505988 2_1:-24102289 Msa0202090:CDS
TGTGTAGCTTGTAAAGATTA+GGG 0.506181 2_1:+24099183 None:intergenic
ATCCATATGCATTGCAACCT+CGG 0.512899 2_1:+24101620 None:intergenic
CTCTAGAATCAGCACAGAGA+TGG 0.514558 2_1:-24100419 Msa0202090:CDS
TTACTCTCATGTTATTGAAG+AGG 0.514888 2_1:-24102093 Msa0202090:CDS
GTTGCTATTTGGGGTATGGG+AGG 0.515124 2_1:-24101993 Msa0202090:CDS
CAATGACTCGAGGTAGTTGA+AGG 0.515631 2_1:+24099256 None:intergenic
AGCACAGAGATGGAGAAATT+GGG 0.517105 2_1:-24100409 Msa0202090:CDS
CTCCAATGTTGTCATTGGAT+CGG 0.517193 2_1:+24099073 None:intergenic
GATGAAATTTGGCTTGGTTG+TGG 0.518296 2_1:+24099137 None:intergenic
CGAGGAAGCTCTCGAGGACG+TGG 0.520660 2_1:-24100062 Msa0202090:CDS
GAGAGCTTCCTCGCCATCTC+CGG 0.524602 2_1:+24100072 None:intergenic
TGCAAAATTGTTGCTATTTG+GGG 0.531848 2_1:-24102002 Msa0202090:CDS
ACCTCGAAAGCAAGACCGAC+TGG 0.536869 2_1:-24099860 Msa0202090:CDS
AGAATTAAGCTTGAGAAAGG+TGG 0.537079 2_1:-24098780 Msa0202090:CDS
AAAGCTTTATCAAGTTCAAG+TGG 0.544394 2_1:-24101772 Msa0202090:CDS
CAGTTCTTGATGTTTCTGCA+GGG 0.550243 2_1:-24099208 Msa0202090:CDS
AAACAGCTAGGTTAACTGAA+TGG 0.550430 2_1:-24099730 Msa0202090:CDS
ACTTGGAATAATCTGAGTCC+TGG 0.551278 2_1:-24101705 Msa0202090:CDS
AGCAGAGTATAGACCTAAGA+TGG 0.551372 2_1:+24099762 None:intergenic
TCGGTTCAAAATGCCGGAGA+TGG 0.551468 2_1:-24100085 Msa0202090:CDS
CTACCTGAATCATGTGGCAA+TGG 0.556177 2_1:-24099440 Msa0202090:CDS
TCATACCTAAGAAAAGCAAA+AGG 0.559116 2_1:-24100271 Msa0202090:CDS
GTGTCCCATTCATAAAATGT+TGG 0.559240 2_1:+24100313 None:intergenic
ACCAAATGTCATAGGAAACA+TGG 0.561387 2_1:-24099483 Msa0202090:CDS
CTAGCCATAATTGTCCTTGG+AGG 0.564148 2_1:-24100352 Msa0202090:CDS
ATATCGTCGGTTCAAAATGC+CGG 0.570177 2_1:-24100091 Msa0202090:CDS
GATCTCTCATTTGGAAAACC+AGG 0.572260 2_1:+24101687 None:intergenic
CAAGCAAGGGATGTTTGGGA+AGG 0.572879 2_1:-24101873 Msa0202090:CDS
TGCCGATCCAATGACAACAT+TGG 0.575633 2_1:-24099075 Msa0202090:CDS
TATCACAACATTGTCAAGCA+AGG 0.576092 2_1:-24101887 Msa0202090:CDS
GAACAGTGGAAATTGGAGAA+AGG 0.576290 2_1:-24098927 Msa0202090:CDS
ATTTGTCTAATCTTGAACAG+TGG 0.577756 2_1:-24098941 Msa0202090:CDS
ACTTGACTGAACTCATTGAA+AGG 0.580887 2_1:-24100030 Msa0202090:CDS
AAGGTGCTATGTGTTGTCTT+GGG 0.583724 2_1:-24098908 Msa0202090:CDS
AGATGGCGAGGAAGCTCTCG+AGG 0.584245 2_1:-24100068 Msa0202090:CDS
AAGCAAGGGATGTTTGGGAA+GGG 0.586598 2_1:-24101872 Msa0202090:CDS
TTTACAAGCTACACATAGAA+GGG 0.591616 2_1:-24099175 Msa0202090:CDS
TTCAAATGCATAATCTCATG+AGG 0.592093 2_1:-24099958 Msa0202090:CDS
GAAATGGTTGGAAGATGTGG+AGG 0.592701 2_1:-24100382 Msa0202090:CDS
ATCACAACATTGTCAAGCAA+GGG 0.595856 2_1:-24101886 Msa0202090:CDS
GACCGACTGGTAAAGTTCGA+CGG 0.598671 2_1:-24099847 Msa0202090:CDS
GAAGCATCAAGTTCAATACA+TGG 0.601163 2_1:-24102140 Msa0202090:CDS
GGCAGAAGGTATCATATCGT+CGG 0.604361 2_1:-24100104 Msa0202090:CDS
GCCTCAAGAAGAAACATGAC+AGG 0.606493 2_1:-24102311 Msa0202090:CDS
TGTGCTAAGTGTAGGAAACA+TGG 0.606586 2_1:+24100178 None:intergenic
TTGAAAAGAGTTCAACAGGA+AGG 0.610893 2_1:-24099991 Msa0202090:CDS
TCAAAATGCCGGAGATGGCG+AGG 0.611665 2_1:-24100080 Msa0202090:CDS
CTGTTGAATTTCCTGTGAGT+AGG 0.613153 2_1:+24099513 None:intergenic
CCAAGGACAATTATGGCTAG+AGG 0.616051 2_1:+24100355 None:intergenic
ATAAGAACATGGGTGGCAGA+AGG 0.618647 2_1:-24100118 Msa0202090:CDS
CATATGCCTTAGACACACAT+AGG 0.618725 2_1:+24099933 None:intergenic
TGGTTGATAACAACAATAAG+GGG 0.624247 2_1:-24102025 Msa0202090:CDS
GTATAGACCTAAGATGGTGA+TGG 0.624948 2_1:+24099768 None:intergenic
TTACATCACATTTCTCAGCA+GGG 0.631765 2_1:+24099363 None:intergenic
CAAGAAGCTTATAAGAACAT+GGG 0.637261 2_1:-24100128 Msa0202090:CDS
ATCCGTCGAACTTTACCAGT+CGG 0.640307 2_1:+24099845 None:intergenic
AAATTGGGAAGAGAAATGGT+TGG 0.645592 2_1:-24100394 Msa0202090:CDS
AGGCAAAGAACAACTTCTAG+GGG 0.649700 2_1:-24100251 Msa0202090:CDS
AAGCATCAAGTTCAATACAT+GGG 0.652598 2_1:-24102139 Msa0202090:CDS
TTGATGCTAATAGTCCTCCA+AGG 0.661256 2_1:+24100338 None:intergenic
TCAAATGCATAATCTCATGA+GGG 0.667768 2_1:-24099957 Msa0202090:CDS
CAAACCCTAGACCTACTCAC+AGG 0.672651 2_1:-24099524 Msa0202090:CDS
GAAGCTTATAAGAACATGGG+TGG 0.672770 2_1:-24100125 Msa0202090:CDS
TTATATCTACCTGAATCATG+TGG 0.680093 2_1:-24099446 Msa0202090:CDS
TAACGTAAAACAATGACTCG+AGG 0.683079 2_1:+24099246 None:intergenic
AAAACAAGTGACCTTAACTG+AGG 0.692869 2_1:+24098969 None:intergenic
GCTTACTACTAGGAATACCG+AGG 0.704421 2_1:-24101637 Msa0202090:CDS
TGAAAGGTGTATGATTCAGG+TGG 0.706745 2_1:-24100014 Msa0202090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACAAAAAGTTTAAAAACTTT+TGG - chr2_1:24098977-24098996 Msa0202090:CDS 15.0%
!!! TTATTTTTGTTTCATTTGAA+TGG - chr2_1:24100567-24100586 Msa0202090:intron 15.0%
!!! AAATCATATATTTTATTCCT+TGG + chr2_1:24100600-24100619 None:intergenic 15.0%
!!! TAAAATATATGATTTGTGTA+TGG - chr2_1:24100605-24100624 Msa0202090:intron 15.0%
!! TTTAAATTTCCTATTGAATT+TGG + chr2_1:24101608-24101627 None:intergenic 15.0%
!!! TATTACCAATTTTCTTAAAT+TGG + chr2_1:24101840-24101859 None:intergenic 15.0%
!!! TAAAATGTAAATTTTCATTC+TGG + chr2_1:24102562-24102581 None:intergenic 15.0%
!! AAAATCTTAGAACTGAATTA+AGG - chr2_1:24098693-24098712 Msa0202090:three_prime_UTR 20.0%
!! TTAATAGAAATTCATCAAGT+AGG - chr2_1:24098914-24098933 Msa0202090:CDS 20.0%
!! TTTGGTATAAAAAGTGAAAT+AGG - chr2_1:24098995-24099014 Msa0202090:CDS 20.0%
!!! TGAAAATGATGTTAATGTTT+TGG - chr2_1:24099102-24099121 Msa0202090:CDS 20.0%
!! TATATCATAGTACTAAAGTT+AGG - chr2_1:24099218-24099237 Msa0202090:CDS 20.0%
!! GAAACAAAAATAACTTTCTT+AGG + chr2_1:24100560-24100579 None:intergenic 20.0%
!! CAAATTTCAATAATTCAACT+TGG + chr2_1:24100681-24100700 None:intergenic 20.0%
!! ACTAACCAATTTAAGAAAAT+TGG - chr2_1:24101832-24101851 Msa0202090:CDS 20.0%
!!! TTTCTTGTTACATTATTTTG+AGG - chr2_1:24102524-24102543 Msa0202090:CDS 20.0%
!!! AAACCTTTTGATTCTGTTTA+AGG + chr2_1:24098876-24098895 None:intergenic 25.0%
! GTTATTGAAGAGGATATAAT+TGG - chr2_1:24099076-24099095 Msa0202090:CDS 25.0%
!!! TTTGGTTGATAACAACAATA+AGG - chr2_1:24099132-24099151 Msa0202090:CDS 25.0%
!!! TTGGTTGATAACAACAATAA+GGG - chr2_1:24099133-24099152 Msa0202090:CDS 25.0%
! GTAAAATATTGCTTACTACT+AGG - chr2_1:24099512-24099531 Msa0202090:CDS 25.0%
!! AGATTTAGACTTTGTTTGAT+TGG - chr2_1:24099674-24099693 Msa0202090:CDS 25.0%
! AATGTCTAAATCTACATACA+CGG + chr2_1:24099795-24099814 None:intergenic 25.0%
! ATGTAGATTTAGACATTGTT+TGG - chr2_1:24099798-24099817 Msa0202090:CDS 25.0%
! ATTCTATGAAAAATAAGAGC+AGG + chr2_1:24100134-24100153 None:intergenic 25.0%
!!! TTATGATTTTTCCGCTTTTA+TGG + chr2_1:24100208-24100227 None:intergenic 25.0%
! CTAGAAAATAACTGAAAATC+TGG + chr2_1:24100234-24100253 None:intergenic 25.0%
! TAATGGTATGACTTAAATAG+TGG + chr2_1:24100366-24100385 None:intergenic 25.0%
! ACTATTTAAGTCATACCATT+AGG - chr2_1:24100365-24100384 Msa0202090:CDS 25.0%
! CTATTCCATAATTGGTAAAA+GGG + chr2_1:24100644-24100663 None:intergenic 25.0%
! TGTAAAACCTATTCCATAAT+TGG + chr2_1:24100652-24100671 None:intergenic 25.0%
!! AAAGCCAACATTTTATGAAT+GGG - chr2_1:24100842-24100861 Msa0202090:intron 25.0%
!!! AAACATGGTTTTAATTGGTA+AGG + chr2_1:24100969-24100988 None:intergenic 25.0%
!! TTTGTATCTCTAAGTTTTCA+GGG + chr2_1:24101010-24101029 None:intergenic 25.0%
!!! GATGGTTTTTTAAATGTCTA+GGG + chr2_1:24101376-24101395 None:intergenic 25.0%
!!! TGATGGTTTTTTAAATGTCT+AGG + chr2_1:24101377-24101396 None:intergenic 25.0%
! GGAAAATTACCTAAAGAAAT+TGG - chr2_1:24101527-24101546 Msa0202090:intron 25.0%
! ATCAAAAAGCCAATTTCTTT+AGG + chr2_1:24101539-24101558 None:intergenic 25.0%
! TTAGACTTAGAAACCTTAAA+TGG + chr2_1:24101562-24101581 None:intergenic 25.0%
! ATAGGAAACATGGAAAAATT+GGG - chr2_1:24101686-24101705 Msa0202090:CDS 25.0%
! GTAATAGATGATCCTAATTA+TGG - chr2_1:24101854-24101873 Msa0202090:CDS 25.0%
!!! TAGCAAGTTTTGATGAAATT+TGG + chr2_1:24102036-24102055 None:intergenic 25.0%
!!! TTACAGCTTGATTCATTTTT+AGG - chr2_1:24102136-24102155 Msa0202090:CDS 25.0%
!!! TTCATTTTTAGGAAAGCAAA+TGG - chr2_1:24102147-24102166 Msa0202090:CDS 25.0%
!! TTTAGAATTAAGCTTGAGAA+AGG - chr2_1:24102376-24102395 Msa0202090:CDS 25.0%
! TGTGACTATTAGAATTAGAA+TGG - chr2_1:24102451-24102470 Msa0202090:CDS 25.0%
TAGAACTGAATTAAGGATGA+TGG - chr2_1:24098700-24098719 Msa0202090:exon 30.0%
AAGATGAATCTCTCAAGAAT+TGG - chr2_1:24098759-24098778 Msa0202090:CDS 30.0%
GTACCTTAAACAGAATCAAA+AGG - chr2_1:24098870-24098889 Msa0202090:CDS 30.0%
! GGTTTGTTTCAATTATCAAC+AGG - chr2_1:24098891-24098910 Msa0202090:CDS 30.0%
!! AAGTTGATGCTATCATTTCT+AGG - chr2_1:24098942-24098961 Msa0202090:CDS 30.0%
AAGCATCAAGTTCAATACAT+GGG - chr2_1:24099020-24099039 Msa0202090:CDS 30.0%
TTACTCTCATGTTATTGAAG+AGG - chr2_1:24099066-24099085 Msa0202090:CDS 30.0%
!!! TAATGTTTTGGAGTCATGTT+TGG - chr2_1:24099114-24099133 Msa0202090:CDS 30.0%
!! TGGTTGATAACAACAATAAG+GGG - chr2_1:24099134-24099153 Msa0202090:CDS 30.0%
!! GTGCAAAATTGTTGCTATTT+GGG - chr2_1:24099156-24099175 Msa0202090:CDS 30.0%
!! TGCAAAATTGTTGCTATTTG+GGG - chr2_1:24099157-24099176 Msa0202090:CDS 30.0%
AGGTTTAGGAAAAACAACAT+TGG - chr2_1:24099186-24099205 Msa0202090:CDS 30.0%
!! AAAATTTTGAGAGCTTAGCT+TGG - chr2_1:24099242-24099261 Msa0202090:CDS 30.0%
!! AAATTTTGAGAGCTTAGCTT+GGG - chr2_1:24099243-24099262 Msa0202090:CDS 30.0%
TCTTCTCTTAACTCTTTAGA+AGG + chr2_1:24099334-24099353 None:intergenic 30.0%
! AAAGCTTTATCAAGTTCAAG+TGG - chr2_1:24099387-24099406 Msa0202090:CDS 30.0%
! TGGTAGTTCTTGATGATATT+TGG - chr2_1:24099422-24099441 Msa0202090:CDS 30.0%
AAAGTCTAAATCTTCATACC+TGG + chr2_1:24099667-24099686 None:intergenic 30.0%
ATGTCTAAATCTACATACAC+GGG + chr2_1:24099794-24099813 None:intergenic 30.0%
AAGATATCCCAAAGAGTTTA+TGG - chr2_1:24099871-24099890 Msa0202090:CDS 30.0%
AGTTCATAGAAGAAATGAGT+TGG - chr2_1:24100097-24100116 Msa0202090:CDS 30.0%
AAATGAAGTACACAAAGTGT+AGG + chr2_1:24100262-24100281 None:intergenic 30.0%
! TCATCTTTAAGAAACCAAAC+CGG - chr2_1:24100308-24100327 Msa0202090:CDS 30.0%
ACATCTATCACATTACAATC+CGG + chr2_1:24100330-24100349 None:intergenic 30.0%
ACTTTCTTAGGTCATTTGTT+AGG + chr2_1:24100548-24100567 None:intergenic 30.0%
CCTATTCCATAATTGGTAAA+AGG + chr2_1:24100645-24100664 None:intergenic 30.0%
! CCTTTTACCAATTATGGAAT+AGG - chr2_1:24100642-24100661 Msa0202090:intron 30.0%
! CAAAGCCAACATTTTATGAA+TGG - chr2_1:24100841-24100860 Msa0202090:intron 30.0%
TCATACCTAAGAAAAGCAAA+AGG - chr2_1:24100888-24100907 Msa0202090:intron 30.0%
!!! GTAGGAAACATGGTTTTAAT+TGG + chr2_1:24100974-24100993 None:intergenic 30.0%
! GTTTGTATCTCTAAGTTTTC+AGG + chr2_1:24101011-24101030 None:intergenic 30.0%
CAAGAAGCTTATAAGAACAT+GGG - chr2_1:24101031-24101050 Msa0202090:intron 30.0%
TTCAAATGCATAATCTCATG+AGG - chr2_1:24101201-24101220 Msa0202090:intron 30.0%
TCAAATGCATAATCTCATGA+GGG - chr2_1:24101202-24101221 Msa0202090:intron 30.0%
!! TTCTTGACATTATTGATTCG+AGG - chr2_1:24101258-24101277 Msa0202090:intron 30.0%
TAAAAAACCATCACCATCTT+AGG - chr2_1:24101384-24101403 Msa0202090:intron 30.0%
!!! TTAACCTAGCTGTTTTTTCA+TGG + chr2_1:24101424-24101443 None:intergenic 30.0%
GAAGGAATTCAATGTCAAAT+GGG - chr2_1:24101506-24101525 Msa0202090:intron 30.0%
!! TTGGCTTTTTGATCCATTTA+AGG - chr2_1:24101546-24101565 Msa0202090:intron 30.0%
GTTCAAATACCAAATGTCAT+AGG - chr2_1:24101668-24101687 Msa0202090:CDS 30.0%
CATAGGAAACATGGAAAAAT+TGG - chr2_1:24101685-24101704 Msa0202090:CDS 30.0%
TTATATCTACCTGAATCATG+TGG - chr2_1:24101713-24101732 Msa0202090:CDS 30.0%
!! AGTTTGCAAGTTTTTCAGAT+TGG + chr2_1:24101765-24101784 None:intergenic 30.0%
TCTGAAAAACTTGCAAACTT+TGG - chr2_1:24101766-24101785 Msa0202090:CDS 30.0%
TTGAAGATATCGCCATAATT+AGG + chr2_1:24101869-24101888 None:intergenic 30.0%
!!! ATTGTTTTACGTTAGTTCTG+AGG - chr2_1:24101922-24101941 Msa0202090:CDS 30.0%
! TGTGTAGCTTGTAAAGATTA+GGG + chr2_1:24101979-24101998 None:intergenic 30.0%
! ATGTGTAGCTTGTAAAGATT+AGG + chr2_1:24101980-24101999 None:intergenic 30.0%
TTTACAAGCTACACATAGAA+GGG - chr2_1:24101984-24102003 Msa0202090:CDS 30.0%
!! AGTTTTGATGAAATTTGGCT+TGG + chr2_1:24102031-24102050 None:intergenic 30.0%
AACTCAAGCAACCTTAAATT+TGG + chr2_1:24102118-24102137 None:intergenic 30.0%
ATTTGTCTAATCTTGAACAG+TGG - chr2_1:24102218-24102237 Msa0202090:CDS 30.0%
TAATCTTGAACAGTGGAAAT+TGG - chr2_1:24102225-24102244 Msa0202090:CDS 30.0%
TTCAAATTGTACTAAGCTTG+AGG - chr2_1:24102285-24102304 Msa0202090:CDS 30.0%
! TAGGTTTGTAAGTAGTCTTA+AGG - chr2_1:24102324-24102343 Msa0202090:CDS 30.0%
! TGTAAGTAGTCTTAAGGATT+TGG - chr2_1:24102330-24102349 Msa0202090:CDS 30.0%
! TGTGAAGTCTACTATTGGTT+TGG + chr2_1:24098606-24098625 None:intergenic 35.0%
TGTACTGTGAAGTCTACTAT+TGG + chr2_1:24098611-24098630 None:intergenic 35.0%
GATGAAGCTGTGTTCTTATA+TGG - chr2_1:24098653-24098672 Msa0202090:three_prime_UTR 35.0%
! GAAGCATCAAGTTCAATACA+TGG - chr2_1:24099019-24099038 Msa0202090:CDS 35.0%
! GGTGCAAAATTGTTGCTATT+TGG - chr2_1:24099155-24099174 Msa0202090:CDS 35.0%
!! AATTGTTGCTATTTGGGGTA+TGG - chr2_1:24099162-24099181 Msa0202090:CDS 35.0%
!! ATTGTTGCTATTTGGGGTAT+GGG - chr2_1:24099163-24099182 Msa0202090:CDS 35.0%
TATCACAACATTGTCAAGCA+AGG - chr2_1:24099272-24099291 Msa0202090:CDS 35.0%
ATCACAACATTGTCAAGCAA+GGG - chr2_1:24099273-24099292 Msa0202090:CDS 35.0%
! CTTGATGATATTTGGAGTGT+AGG - chr2_1:24099430-24099449 Msa0202090:CDS 35.0%
! ATATTTGGAGTGTAGGTACT+TGG - chr2_1:24099437-24099456 Msa0202090:CDS 35.0%
ACAGACAATGATCTCTCATT+TGG + chr2_1:24099484-24099503 None:intergenic 35.0%
CTTGAATGAAGATGATAGCT+GGG - chr2_1:24099591-24099610 Msa0202090:CDS 35.0%
! GATCTGGATCATCATGTTTT+CGG + chr2_1:24099639-24099658 None:intergenic 35.0%
TAAATCTTCATACCTGGATC+TGG + chr2_1:24099661-24099680 None:intergenic 35.0%
TGATACGCACTTAACTAAGT+TGG + chr2_1:24099828-24099847 None:intergenic 35.0%
CTCATCTCCATAAACTCTTT+GGG + chr2_1:24099881-24099900 None:intergenic 35.0%
TAAGCACTTGTGAGATCTTA+TGG + chr2_1:24099939-24099958 None:intergenic 35.0%
AAAGAGGATAAGTGCTAGTT+TGG + chr2_1:24099991-24100010 None:intergenic 35.0%
AACTAGCAGGTTCATTAACA+AGG + chr2_1:24100055-24100074 None:intergenic 35.0%
GAAAGAAGATTGAAACTAGC+AGG + chr2_1:24100068-24100087 None:intergenic 35.0%
ATTTCTACAGGTCACAAACA+TGG + chr2_1:24100169-24100188 None:intergenic 35.0%
CATGCAGAGAAAATTTCTAC+AGG + chr2_1:24100181-24100200 None:intergenic 35.0%
TATCACATTACAATCCGGTT+TGG + chr2_1:24100325-24100344 None:intergenic 35.0%
TATAGTCTCGTATCTCCTAA+TGG + chr2_1:24100383-24100402 None:intergenic 35.0%
!! ATTTGAATGGTTTTGCACCA+AGG - chr2_1:24100580-24100599 Msa0202090:intron 35.0%
AAATTGGGAAGAGAAATGGT+TGG - chr2_1:24100765-24100784 Msa0202090:intron 35.0%
GTGTCCCATTCATAAAATGT+TGG + chr2_1:24100849-24100868 None:intergenic 35.0%
!! CTTTGCCTTTTGCTTTTCTT+AGG + chr2_1:24100896-24100915 None:intergenic 35.0%
AAAGGCAAAGAACAACTTCT+AGG - chr2_1:24100906-24100925 Msa0202090:intron 35.0%
AAGGCAAAGAACAACTTCTA+GGG - chr2_1:24100907-24100926 Msa0202090:intron 35.0%
CCATGTTCTTATAAGCTTCT+TGG + chr2_1:24101033-24101052 None:intergenic 35.0%
CCAAGAAGCTTATAAGAACA+TGG - chr2_1:24101030-24101049 Msa0202090:intron 35.0%
ACTTGACTGAACTCATTGAA+AGG - chr2_1:24101129-24101148 Msa0202090:intron 35.0%
! CATTGAAAGGTGTATGATTC+AGG - chr2_1:24101142-24101161 Msa0202090:intron 35.0%
TTGAAAAGAGTTCAACAGGA+AGG - chr2_1:24101168-24101187 Msa0202090:intron 35.0%
GATTGCGTTATATCTTGATC+AGG - chr2_1:24101334-24101353 Msa0202090:intron 35.0%
AAACAGCTAGGTTAACTGAA+TGG - chr2_1:24101429-24101448 Msa0202090:intron 35.0%
!!! GTTACTTAGAGTTTTGAACC+TGG - chr2_1:24101484-24101503 Msa0202090:intron 35.0%
TTTGACATTGAATTCCTTCC+AGG + chr2_1:24101505-24101524 None:intergenic 35.0%
GGAAGGAATTCAATGTCAAA+TGG - chr2_1:24101505-24101524 Msa0202090:intron 35.0%
GATGAACTGCCAAATTCAAT+AGG - chr2_1:24101596-24101615 Msa0202090:CDS 35.0%
ACCAAATGTCATAGGAAACA+TGG - chr2_1:24101676-24101695 Msa0202090:CDS 35.0%
TCCATGTTTCCTATGACATT+TGG + chr2_1:24101680-24101699 None:intergenic 35.0%
TTACATCACATTTCTCAGCA+GGG + chr2_1:24101799-24101818 None:intergenic 35.0%
TTTACATCACATTTCTCAGC+AGG + chr2_1:24101800-24101819 None:intergenic 35.0%
TAACGTAAAACAATGACTCG+AGG + chr2_1:24101916-24101935 None:intergenic 35.0%
CTTTACAAGCTACACATAGA+AGG - chr2_1:24101983-24102002 Msa0202090:CDS 35.0%
GGTTGTGGAAGATTACTTAT+TGG + chr2_1:24102010-24102029 None:intergenic 35.0%
CTTGCTAAGCTCAAATTACA+AGG - chr2_1:24102049-24102068 Msa0202090:CDS 35.0%
AAGCTCAAATTACAAGGTTC+TGG - chr2_1:24102055-24102074 Msa0202090:CDS 35.0%
TGGAGAAGCTACCAAATTTA+AGG - chr2_1:24102104-24102123 Msa0202090:CDS 35.0%
!! CAAATGGTTTGTTCAAGCAA+AGG - chr2_1:24102163-24102182 Msa0202090:CDS 35.0%
AAAACAAGTGACCTTAACTG+AGG + chr2_1:24102193-24102212 None:intergenic 35.0%
CTTACAAACCTAATCTCTTC+TGG + chr2_1:24102316-24102335 None:intergenic 35.0%
AGAATTAAGCTTGAGAAAGG+TGG - chr2_1:24102379-24102398 Msa0202090:CDS 35.0%
AGTTCAACATGTTCCATCTT+TGG - chr2_1:24102417-24102436 Msa0202090:CDS 35.0%
CAGTAACGAAATACCAAAGA+TGG + chr2_1:24102433-24102452 None:intergenic 35.0%
ACCTGTCATGTTTCTTCTTG+AGG + chr2_1:24098852-24098871 None:intergenic 40.0%
ATTGTCAAGCAAGGGATGTT+TGG - chr2_1:24099281-24099300 Msa0202090:CDS 40.0%
TTGTCAAGCAAGGGATGTTT+GGG - chr2_1:24099282-24099301 Msa0202090:CDS 40.0%
!! TCAAGTGGAGAAGAAGTGTT+TGG - chr2_1:24099402-24099421 Msa0202090:CDS 40.0%
ACTTGGAATAATCTGAGTCC+TGG - chr2_1:24099454-24099473 Msa0202090:CDS 40.0%
GATCTCTCATTTGGAAAACC+AGG + chr2_1:24099475-24099494 None:intergenic 40.0%
GAGAGATCATTGTCTGTTGT+TGG - chr2_1:24099487-24099506 Msa0202090:CDS 40.0%
ATCCATATGCATTGCAACCT+CGG + chr2_1:24099542-24099561 None:intergenic 40.0%
GCTTGAATGAAGATGATAGC+TGG - chr2_1:24099590-24099609 Msa0202090:CDS 40.0%
TAAATCTACATACACGGGTC+TGG + chr2_1:24099789-24099808 None:intergenic 40.0%
GCTCATCTCCATAAACTCTT+TGG + chr2_1:24099882-24099901 None:intergenic 40.0%
TGACAGTGCGTTATTGAAAG+AGG + chr2_1:24100007-24100026 None:intergenic 40.0%
CTGCATGTTTGCCATAAAAG+CGG - chr2_1:24100194-24100213 Msa0202090:CDS 40.0%
TCGAACACCTTCATTGTGTT+GGG + chr2_1:24100419-24100438 None:intergenic 40.0%
GTCTGCATTGTACACAATCT+AGG + chr2_1:24100523-24100542 None:intergenic 40.0%
CCATAATTGGTAAAAGGGTG+TGG + chr2_1:24100639-24100658 None:intergenic 40.0%
! CCACACCCTTTTACCAATTA+TGG - chr2_1:24100636-24100655 Msa0202090:intron 40.0%
AGCACAGAGATGGAGAAATT+GGG - chr2_1:24100750-24100769 Msa0202090:intron 40.0%
GGAGAAATTGGGAAGAGAAA+TGG - chr2_1:24100761-24100780 Msa0202090:intron 40.0%
AGAGAAATGGTTGGAAGATG+TGG - chr2_1:24100774-24100793 Msa0202090:intron 40.0%
TAGTCCTCCAAGGACAATTA+TGG + chr2_1:24100814-24100833 None:intergenic 40.0%
TTGATGCTAATAGTCCTCCA+AGG + chr2_1:24100824-24100843 None:intergenic 40.0%
AGGCAAAGAACAACTTCTAG+GGG - chr2_1:24100908-24100927 Msa0202090:intron 40.0%
TGTGCTAAGTGTAGGAAACA+TGG + chr2_1:24100984-24101003 None:intergenic 40.0%
GAAGCTTATAAGAACATGGG+TGG - chr2_1:24101034-24101053 Msa0202090:intron 40.0%
!! ATATCGTCGGTTCAAAATGC+CGG - chr2_1:24101068-24101087 Msa0202090:intron 40.0%
! TGAAAGGTGTATGATTCAGG+TGG - chr2_1:24101145-24101164 Msa0202090:intron 40.0%
GTGGTTGAAAAGAGTTCAAC+AGG - chr2_1:24101164-24101183 Msa0202090:intron 40.0%
CATATGCCTTAGACACACAT+AGG + chr2_1:24101229-24101248 None:intergenic 40.0%
GTATAGACCTAAGATGGTGA+TGG + chr2_1:24101394-24101413 None:intergenic 40.0%
AGCAGAGTATAGACCTAAGA+TGG + chr2_1:24101400-24101419 None:intergenic 40.0%
GCTACCATGAAAAAACAGCT+AGG - chr2_1:24101417-24101436 Msa0202090:intron 40.0%
!!! CTTAGAGTTTTGAACCTGGA+AGG - chr2_1:24101488-24101507 Msa0202090:intron 40.0%
ATTTCCTGTGAGTAGGTCTA+GGG + chr2_1:24101642-24101661 None:intergenic 40.0%
AATTTCCTGTGAGTAGGTCT+AGG + chr2_1:24101643-24101662 None:intergenic 40.0%
CTGTTGAATTTCCTGTGAGT+AGG + chr2_1:24101649-24101668 None:intergenic 40.0%
! GTGGCAATGGCATTGAAAAA+TGG - chr2_1:24101732-24101751 Msa0202090:CDS 40.0%
! TCAGTTCTTGATGTTTCTGC+AGG - chr2_1:24101950-24101969 Msa0202090:CDS 40.0%
! CAGTTCTTGATGTTTCTGCA+GGG - chr2_1:24101951-24101970 Msa0202090:CDS 40.0%
!! GATGAAATTTGGCTTGGTTG+TGG + chr2_1:24102025-24102044 None:intergenic 40.0%
CTCCAATGTTGTCATTGGAT+CGG + chr2_1:24102089-24102108 None:intergenic 40.0%
AGCTTCTCCAATGTTGTCAT+TGG + chr2_1:24102094-24102113 None:intergenic 40.0%
! GCAAAGGTTTTCCTCAGTTA+AGG - chr2_1:24102179-24102198 Msa0202090:CDS 40.0%
GAACAGTGGAAATTGGAGAA+AGG - chr2_1:24102232-24102251 Msa0202090:CDS 40.0%
!! AAAGGTGCTATGTGTTGTCT+TGG - chr2_1:24102250-24102269 Msa0202090:CDS 40.0%
! AAGGTGCTATGTGTTGTCTT+GGG - chr2_1:24102251-24102270 Msa0202090:CDS 40.0%
AGGTTGTTCCAGAAGAGATT+AGG - chr2_1:24102305-24102324 Msa0202090:CDS 40.0%
GCCTCAAGAAGAAACATGAC+AGG - chr2_1:24098848-24098867 Msa0202090:CDS 45.0%
! ATTTGGGGTATGGGAGGTTT+AGG - chr2_1:24099172-24099191 Msa0202090:CDS 45.0%
AAGCAAGGGATGTTTGGGAA+GGG - chr2_1:24099287-24099306 Msa0202090:CDS 45.0%
GCTTACTACTAGGAATACCG+AGG - chr2_1:24099522-24099541 Msa0202090:CDS 45.0%
TACCGAGGTTGCAATGCATA+TGG - chr2_1:24099537-24099556 Msa0202090:CDS 45.0%
CTGGGAGTTGTTCCAGAAAA+AGG - chr2_1:24099609-24099628 Msa0202090:CDS 45.0%
! GTTTTCGGCATGCCTTTTTC+TGG + chr2_1:24099624-24099643 None:intergenic 45.0%
TTCATACCTGGATCTGGATC+TGG + chr2_1:24099655-24099674 None:intergenic 45.0%
TTGTGTTGGGTGTAAGGTCT+GGG + chr2_1:24100406-24100425 None:intergenic 45.0%
ATTGTGTTGGGTGTAAGGTC+TGG + chr2_1:24100407-24100426 None:intergenic 45.0%
CCTTCATTGTGTTGGGTGTA+AGG + chr2_1:24100412-24100431 None:intergenic 45.0%
CCTTACACCCAACACAATGA+AGG - chr2_1:24100409-24100428 Msa0202090:CDS 45.0%
CTCGAACACCTTCATTGTGT+TGG + chr2_1:24100420-24100439 None:intergenic 45.0%
!! CAACACAATGAAGGTGTTCG+AGG - chr2_1:24100418-24100437 Msa0202090:CDS 45.0%
!! CTCTAGAATCAGCACAGAGA+TGG - chr2_1:24100740-24100759 Msa0202090:intron 45.0%
CAGCACAGAGATGGAGAAAT+TGG - chr2_1:24100749-24100768 Msa0202090:intron 45.0%
GAAATGGTTGGAAGATGTGG+AGG - chr2_1:24100777-24100796 Msa0202090:intron 45.0%
CCAAGGACAATTATGGCTAG+AGG + chr2_1:24100807-24100826 None:intergenic 45.0%
CCTCTAGCCATAATTGTCCT+TGG - chr2_1:24100804-24100823 Msa0202090:intron 45.0%
CTAGCCATAATTGTCCTTGG+AGG - chr2_1:24100807-24100826 Msa0202090:intron 45.0%
CAGGGAAATGTGCTAAGTGT+AGG + chr2_1:24100992-24101011 None:intergenic 45.0%
ATAAGAACATGGGTGGCAGA+AGG - chr2_1:24101041-24101060 Msa0202090:intron 45.0%
!! GGCAGAAGGTATCATATCGT+CGG - chr2_1:24101055-24101074 Msa0202090:intron 45.0%
ATCCGTCGAACTTTACCAGT+CGG + chr2_1:24101317-24101336 None:intergenic 45.0%
CTACCTGAATCATGTGGCAA+TGG - chr2_1:24101719-24101738 Msa0202090:CDS 45.0%
ATGCCATTGCCACATGATTC+AGG + chr2_1:24101725-24101744 None:intergenic 45.0%
CAATGACTCGAGGTAGTTGA+AGG + chr2_1:24101906-24101925 None:intergenic 45.0%
TGCCGATCCAATGACAACAT+TGG - chr2_1:24102084-24102103 Msa0202090:CDS 45.0%
!! GTTGCTATTTGGGGTATGGG+AGG - chr2_1:24099166-24099185 Msa0202090:CDS 50.0%
CAAGCAAGGGATGTTTGGGA+AGG - chr2_1:24099286-24099305 Msa0202090:CDS 50.0%
GATGATCCAGATCCAGATCC+AGG - chr2_1:24099646-24099665 Msa0202090:CDS 50.0%
TACATACACGGGTCTGGATC+AGG + chr2_1:24099783-24099802 None:intergenic 50.0%
CGTAATTGCGCCCAGCTAAA+CGG - chr2_1:24100496-24100515 Msa0202090:intron 50.0%
GTAATTGCGCCCAGCTAAAC+GGG - chr2_1:24100497-24100516 Msa0202090:intron 50.0%
CAATCTAGGCCCGTTTAGCT+GGG + chr2_1:24100509-24100528 None:intergenic 50.0%
ACAATCTAGGCCCGTTTAGC+TGG + chr2_1:24100510-24100529 None:intergenic 50.0%
TCGGTTCAAAATGCCGGAGA+TGG - chr2_1:24101074-24101093 Msa0202090:intron 50.0%
GAGGGACCTATGTGTGTCTA+AGG - chr2_1:24101220-24101239 Msa0202090:intron 50.0%
GACCGACTGGTAAAGTTCGA+CGG - chr2_1:24101312-24101331 Msa0202090:intron 50.0%
CAAACCCTAGACCTACTCAC+AGG - chr2_1:24101635-24101654 Msa0202090:CDS 50.0%
AGGCTGCATTGCAAGCAGCT+TGG - chr2_1:24100438-24100457 Msa0202090:intron 55.0%
GGCTGCATTGCAAGCAGCTT+GGG - chr2_1:24100439-24100458 Msa0202090:intron 55.0%
TGCATTGCAAGCAGCTTGGG+TGG - chr2_1:24100442-24100461 Msa0202090:intron 55.0%
TCAAAATGCCGGAGATGGCG+AGG - chr2_1:24101079-24101098 Msa0202090:intron 55.0%
ACCTCGAAAGCAAGACCGAC+TGG - chr2_1:24101299-24101318 Msa0202090:intron 55.0%
ACCAGTCGGTCTTGCTTTCG+AGG + chr2_1:24101303-24101322 None:intergenic 55.0%
GAGAGCTTCCTCGCCATCTC+CGG + chr2_1:24101090-24101109 None:intergenic 60.0%
AGATGGCGAGGAAGCTCTCG+AGG - chr2_1:24101091-24101110 Msa0202090:intron 60.0%
CGAGGAAGCTCTCGAGGACG+TGG - chr2_1:24101097-24101116 Msa0202090:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 24098599 24102582 24098599 ID=Msa0202090;Name=Msa0202090
chr2_1 mRNA 24098599 24102582 24098599 ID=Msa0202090-mRNA-1;Parent=Msa0202090;Name=Msa0202090-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0.5|1|1|1|2|120|903
chr2_1 exon 24098599 24100442 24098599 ID=Msa0202090-mRNA-1:exon:9321;Parent=Msa0202090-mRNA-1
chr2_1 exon 24101595 24102582 24101595 ID=Msa0202090-mRNA-1:exon:9320;Parent=Msa0202090-mRNA-1
chr2_1 CDS 24101595 24102582 24101595 ID=Msa0202090-mRNA-1:cds;Parent=Msa0202090-mRNA-1
chr2_1 CDS 24098719 24100442 24098719 ID=Msa0202090-mRNA-1:cds;Parent=Msa0202090-mRNA-1
chr2_1 three_prime_UTR 24098599 24098718 24098599 ID=Msa0202090-mRNA-1:three_prime_utr;Parent=Msa0202090-mRNA-1
Gene Sequence

>Msa0202090

ATGGCCAAACCAATAGTAGACTTCACAGTACAAAAAATCAGTGATTTACTCATTGATGAAGCTGTGTTCTTATATGGAGTGAAAGACAAAGTGCAAAATCTTAGAACTGAATTAAGGATGATGGAATCTTACTTACAAGATGCAGATAGAAAGCAAGATGAAGATGAATCTCTCAAGAATTGGATTTCAGAAATCAGAGAAGCTTCTTATGATTCAGATGATGTCATTGAAGCATATGCACTCAAAGAAGCCTCAAGAAGAAACATGACAGGTACCTTAAACAGAATCAAAAGGTTTGTTTCAATTATCAACAGGTTAATAGAAATTCATCAAGTAGGTTCACAAGTTGATGCTATCATTTCTAGGATAACTAGTCTTACAAAAAGTTTAAAAACTTTTGGTATAAAAAGTGAAATAGGAGAAGCATCAAGTTCAATACATGGGAGAAACAAAGCTTTGAGAAGATCTTACTCTCATGTTATTGAAGAGGATATAATTGGTGTTGAAAATGATGTTAATGTTTTGGAGTCATGTTTGGTTGATAACAACAATAAGGGGTGCAAAATTGTTGCTATTTGGGGTATGGGAGGTTTAGGAAAAACAACATTGGCTAAGAAAGTATATCATAGTACTAAAGTTAGGCAAAATTTTGAGAGCTTAGCTTGGGCTTATATATCACAACATTGTCAAGCAAGGGATGTTTGGGAAGGGATTTTGTTGAAGCTTTTATCTCCTTCTAAAGAGTTAAGAGAAGAACTTGTGAGTATGAGAGACGATGAAGTTGCGAAAAAGCTTTATCAAGTTCAAGTGGAGAAGAAGTGTTTGGTAGTTCTTGATGATATTTGGAGTGTAGGTACTTGGAATAATCTGAGTCCTGGTTTTCCAAATGAGAGATCATTGTCTGTTGTTGGTAGTAAAATATTGCTTACTACTAGGAATACCGAGGTTGCAATGCATATGGATTCTACTTGTTATCGTCATGAACTGAACTCTAGAATCAGCACAGAGATGGAGAAATTGGGAAGAGAAATGGTTGGAAGATGTGGAGGTTTACCTCTAGCCATAATTGTCCTTGGAGGACTATTAGCATCAAAGCCAACATTTTATGAATGGGACACAGTGAGACAGAACATCAATTCATACCTAAGAAAAGCAAAAGGCAAAGAACAACTTCTAGGGGTATCTGAAGTACTAGCTTTGAGCTATTATGAATTACCTTACCAATTAAAACCATGTTTCCTACACTTAGCACATTTCCCTGAAAACTTAGAGATACAAACCAAGAAGCTTATAAGAACATGGGTGGCAGAAGGTATCATATCGTCGGTTCAAAATGCCGGAGATGGCGAGGAAGCTCTCGAGGACGTGGCACGACGTTACTTGACTGAACTCATTGAAAGGTGTATGATTCAGGTGGTTGAAAAGAGTTCAACAGGAAGGATTAGAACAGTTCAAATGCATAATCTCATGAGGGACCTATGTGTGTCTAAGGCATATGAAGAAAACTTTCTTGACATTATTGATTCGAGGAATGCAGATCAAACTAGTACCTCGAAAGCAAGACCGACTGGTAAAGTTCGACGGATTGCGTTATATCTTGATCAGGATGTTGATAGATTCTTCCCTAGACATTTAAAAAACCATCACCATCTTAGGTCTATACTCTGCTACCATGAAAAAACAGCTAGGTTAACTGAATGGAGTTTGATGAAATCAGTTTTCAAAAAGTGCAAGTTACTTAGAGTTTTGAACCTGGAAGGAATTCAATGTCAAATGGGAAAATTACCTAAAGAAATTGGCTTTTTGATCCATTTAAGGTTTCTAAGTCTAAGAAACACAAAAATTGATGAACTGCCAAATTCAATAGGAAATTTAAAGTGCTTGCAAACCCTAGACCTACTCACAGGAAATTCAACAGTTCAAATACCAAATGTCATAGGAAACATGGAAAAATTGGGACATTTATATCTACCTGAATCATGTGGCAATGGCATTGAAAAATGGCAACTATCCAATCTGAAAAACTTGCAAACTTTGGTTAACTTCCCTGCTGAGAAATGTGATGTAAAAGATCTCATGAAACTAACCAATTTAAGAAAATTGGTAATAGATGATCCTAATTATGGCGATATCTTCAAAAGTGCTAATGTAACCTTCAACTACCTCGAGTCATTGTTTTACGTTAGTTCTGAGGAAATATCAGTTCTTGATGTTTCTGCAGGGTGCCCTAATCTTTACAAGCTACACATAGAAGGGCCAATAAGTAATCTTCCACAACCAAGCCAAATTTCATCAAAACTTGCTAAGCTCAAATTACAAGGTTCTGGACTTGTTGCCGATCCAATGACAACATTGGAGAAGCTACCAAATTTAAGGTTGCTTGAGTTACAGCTTGATTCATTTTTAGGAAAGCAAATGGTTTGTTCAAGCAAAGGTTTTCCTCAGTTAAGGTCACTTGTTTTGAGTGATTTGTCTAATCTTGAACAGTGGAAATTGGAGAAAGGTGCTATGTGTTGTCTTGGGAAGCTTGAGATTTCAAATTGTACTAAGCTTGAGGTTGTTCCAGAAGAGATTAGGTTTGTAAGTAGTCTTAAGGATTTGGAGATTAGATCAATGTTTGCTGCATTTAGAATTAAGCTTGAGAAAGGTGGTGATGAACATTACAAAGTTCAACATGTTCCATCTTTGGTATTTCGTTACTGTGACTATTAG
Protein sequence

>Msa0202090

MAKPIVDFTVQKISDLLIDEAVFLYGVKDKVQNLRTELRMMESYLQDADRKQDEDESLKNWISEIREASYDSDDVIEAYALKEASRRNMTGTLNRIKRFVSIINRLIEIHQVGSQVDAIISRITSLTKSLKTFGIKSEIGEASSSIHGRNKALRRSYSHVIEEDIIGVENDVNVLESCLVDNNNKGCKIVAIWGMGGLGKTTLAKKVYHSTKVRQNFESLAWAYISQHCQARDVWEGILLKLLSPSKELREELVSMRDDEVAKKLYQVQVEKKCLVVLDDIWSVGTWNNLSPGFPNERSLSVVGSKILLTTRNTEVAMHMDSTCYRHELNSRISTEMEKLGREMVGRCGGLPLAIIVLGGLLASKPTFYEWDTVRQNINSYLRKAKGKEQLLGVSEVLALSYYELPYQLKPCFLHLAHFPENLEIQTKKLIRTWVAEGIISSVQNAGDGEEALEDVARRYLTELIERCMIQVVEKSSTGRIRTVQMHNLMRDLCVSKAYEENFLDIIDSRNADQTSTSKARPTGKVRRIALYLDQDVDRFFPRHLKNHHHLRSILCYHEKTARLTEWSLMKSVFKKCKLLRVLNLEGIQCQMGKLPKEIGFLIHLRFLSLRNTKIDELPNSIGNLKCLQTLDLLTGNSTVQIPNVIGNMEKLGHLYLPESCGNGIEKWQLSNLKNLQTLVNFPAEKCDVKDLMKLTNLRKLVIDDPNYGDIFKSANVTFNYLESLFYVSSEEISVLDVSAGCPNLYKLHIEGPISNLPQPSQISSKLAKLKLQGSGLVADPMTTLEKLPNLRLLELQLDSFLGKQMVCSSKGFPQLRSLVLSDLSNLEQWKLEKGAMCCLGKLEISNCTKLEVVPEEIRFVSSLKDLEIRSMFAAFRIKLEKGGDEHYKVQHVPSLVFRYCDY*