Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715760 | XP_003611860.1 | 90.578 | 329 | 5 | 1 | 1 | 303 | 1 | 329 | 0.0 | 594 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715760 | sp|P14226|PSBO_PEA | 84.084 | 333 | 19 | 3 | 1 | 303 | 1 | 329 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715760 | G7K9H5 | 90.578 | 329 | 5 | 1 | 1 | 303 | 1 | 329 | 0.0 | 594 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030740 | Msa0715760 | 0.824167 | 9.347207e-54 | -8.615850e-47 |
| Msa0056130 | Msa0715760 | 0.813712 | 2.228093e-51 | -8.615850e-47 |
| Msa0060350 | Msa0715760 | 0.808736 | 2.674624e-50 | -8.615850e-47 |
| Msa0065690 | Msa0715760 | 0.808179 | 3.516217e-50 | -8.615850e-47 |
| Msa0103780 | Msa0715760 | 0.813931 | 1.993286e-51 | -8.615850e-47 |
| Msa0105210 | Msa0715760 | 0.805683 | 1.186019e-49 | -8.615850e-47 |
| Msa0635130 | Msa0715760 | 0.808199 | 3.482930e-50 | -8.615850e-47 |
| Msa0635350 | Msa0715760 | 0.813743 | 2.193299e-51 | -8.615850e-47 |
| Msa0641400 | Msa0715760 | 0.893489 | 5.996171e-75 | -8.615850e-47 |
| Msa0650360 | Msa0715760 | 0.809828 | 1.560447e-50 | -8.615850e-47 |
| Msa0672350 | Msa0715760 | 0.810104 | 1.360443e-50 | -8.615850e-47 |
| Msa0687540 | Msa0715760 | 0.811988 | 5.314321e-51 | -8.615850e-47 |
| Msa0690350 | Msa0715760 | 0.802314 | 5.949110e-49 | -8.615850e-47 |
| Msa0702070 | Msa0715760 | 0.810792 | 9.666418e-51 | -8.615850e-47 |
| Msa0702120 | Msa0715760 | 0.813995 | 1.929913e-51 | -8.615850e-47 |
| Msa0715690 | Msa0715760 | 0.807605 | 4.659435e-50 | -8.615850e-47 |
| Msa0715760 | Msa0756480 | 0.833574 | 4.933168e-56 | -8.615850e-47 |
| Msa0715760 | Msa0772150 | 0.800785 | 1.224736e-48 | -8.615850e-47 |
| Msa0715760 | Msa0802500 | 0.823465 | 1.364914e-53 | -8.615850e-47 |
| Msa0715760 | Msa0835510 | 0.843523 | 1.330008e-58 | -8.615850e-47 |
| Msa0715760 | Msa0873830 | 0.822194 | 2.698580e-53 | -8.615850e-47 |
| Msa0715760 | Msa0881050 | 0.831599 | 1.523445e-55 | -8.615850e-47 |
| Msa0715760 | Msa0906150 | 0.804937 | 1.699329e-49 | -8.615850e-47 |
| Msa0715760 | Msa0929400 | 0.817843 | 2.672785e-52 | -8.615850e-47 |
| Msa0715760 | Msa0975080 | 0.809080 | 2.258135e-50 | -8.615850e-47 |
| Msa0715760 | Msa1024140 | 0.801740 | 7.808360e-49 | -8.615850e-47 |
| Msa0715760 | Msa1040770 | 0.805609 | 1.229195e-49 | -8.615850e-47 |
| Msa0715760 | Msa1044040 | 0.800271 | 1.558884e-48 | -8.615850e-47 |
| Msa0715760 | Msa1056520 | 0.809578 | 1.765815e-50 | -8.615850e-47 |
| Msa0715760 | Msa1081700 | 0.807477 | 4.958080e-50 | -8.615850e-47 |
| Msa0715760 | Msa1093390 | 0.802552 | 5.315471e-49 | -8.615850e-47 |
| Msa0715760 | Msa1122510 | 0.801694 | 7.978513e-49 | -8.615850e-47 |
| Msa0715760 | Msa1180410 | 0.815789 | 7.720483e-52 | -8.615850e-47 |
| Msa0715760 | Msa1186210 | 0.833023 | 6.765680e-56 | -8.615850e-47 |
| Msa0715760 | Msa1190910 | 0.813674 | 2.271043e-51 | -8.615850e-47 |
| Msa0715760 | Msa1222390 | 0.825647 | 4.181640e-54 | -8.615850e-47 |
| Msa0715760 | Msa1232010 | 0.819395 | 1.188115e-52 | -8.615850e-47 |
| Msa0715760 | Msa1254210 | 0.804298 | 2.310367e-49 | -8.615850e-47 |
| Msa0715760 | Msa1274740 | 0.813529 | 2.444459e-51 | -8.615850e-47 |
| Msa0715760 | Msa1292620 | 0.821401 | 4.116788e-53 | -8.615850e-47 |
| Msa0715760 | Msa1302150 | 0.819231 | 1.294871e-52 | -8.615850e-47 |
| Msa0715760 | Msa1302160 | 0.806901 | 6.566918e-50 | -8.615850e-47 |
| Msa0715760 | Msa1312730 | 0.820846 | 5.528011e-53 | -8.615850e-47 |
| Msa0715760 | Msa1326000 | 0.802805 | 4.712638e-49 | -8.615850e-47 |
| Msa0715760 | Msa1344430 | 0.803375 | 3.593132e-49 | -8.615850e-47 |
| Msa0715760 | Msa1353270 | 0.803709 | 3.062623e-49 | -8.615850e-47 |
| Msa0715760 | Msa1365120 | 0.818056 | 2.391742e-52 | -8.615850e-47 |
| Msa0715760 | Msa1388850 | 0.800159 | 1.642240e-48 | -8.615850e-47 |
| Msa0715760 | Msa1392680 | 0.817128 | 3.871669e-52 | -8.615850e-47 |
| Msa0715760 | Msa1406550 | 0.824970 | 6.048393e-54 | -8.615850e-47 |
| Msa0715760 | Msa1407710 | 0.822767 | 1.986041e-53 | -8.615850e-47 |
| Msa0715760 | Msa1422500 | 0.808260 | 3.380708e-50 | -8.615850e-47 |
| Msa0715760 | Msa1464800 | 0.816065 | 6.701353e-52 | -8.615850e-47 |
| Msa0141670 | Msa0715760 | 0.826969 | 2.025597e-54 | -8.615850e-47 |
| Msa0143490 | Msa0715760 | 0.803414 | 3.525859e-49 | -8.615850e-47 |
| Msa0143980 | Msa0715760 | 0.802838 | 4.638444e-49 | -8.615850e-47 |
| Msa0152380 | Msa0715760 | 0.802116 | 6.535181e-49 | -8.615850e-47 |
| Msa0168390 | Msa0715760 | 0.834464 | 2.951707e-56 | -8.615850e-47 |
| Msa0181020 | Msa0715760 | 0.815448 | 9.197800e-52 | -8.615850e-47 |
| Msa0206940 | Msa0715760 | 0.805209 | 1.490639e-49 | -8.615850e-47 |
| Msa0216900 | Msa0715760 | 0.801027 | 1.092538e-48 | -8.615850e-47 |
| Msa0217470 | Msa0715760 | 0.821925 | 3.116047e-53 | -8.615850e-47 |
| Msa0371610 | Msa0715760 | 0.802786 | 4.755377e-49 | -8.615850e-47 |
| Msa0380430 | Msa0715760 | 0.817831 | 2.689272e-52 | -8.615850e-47 |
| Msa0394330 | Msa0715760 | 0.833935 | 4.008001e-56 | -8.615850e-47 |
| Msa0411250 | Msa0715760 | 0.801458 | 8.920404e-49 | -8.615850e-47 |
| Msa0411560 | Msa0715760 | 0.801605 | 8.322013e-49 | -8.615850e-47 |
| Msa0450460 | Msa0715760 | 0.809927 | 1.485562e-50 | -8.615850e-47 |
| Msa0458110 | Msa0715760 | 0.801177 | 1.018348e-48 | -8.615850e-47 |
| Msa0476180 | Msa0715760 | 0.823443 | 1.381362e-53 | -8.615850e-47 |
| Msa0258380 | Msa0715760 | 0.815478 | 9.056237e-52 | -8.615850e-47 |
| Msa0278720 | Msa0715760 | 0.800346 | 1.504684e-48 | -8.615850e-47 |
| Msa0296610 | Msa0715760 | 0.806182 | 9.312569e-50 | -8.615850e-47 |
| Msa0296640 | Msa0715760 | 0.809177 | 2.152751e-50 | -8.615850e-47 |
| Msa0304020 | Msa0715760 | 0.800190 | 1.618646e-48 | -8.615850e-47 |
| Msa0334780 | Msa0715760 | 0.807047 | 6.117503e-50 | -8.615850e-47 |
| Msa0334980 | Msa0715760 | 0.809288 | 2.037512e-50 | -8.615850e-47 |
| Msa0352200 | Msa0715760 | 0.800543 | 1.371637e-48 | -8.615850e-47 |
| Msa0354490 | Msa0715760 | 0.814604 | 1.415932e-51 | -8.615850e-47 |
| Msa0486530 | Msa0715760 | 0.803135 | 4.027335e-49 | -8.615850e-47 |
| Msa0489620 | Msa0715760 | 0.861963 | 7.090645e-64 | -8.615850e-47 |
| Msa0511890 | Msa0715760 | 0.805138 | 1.542586e-49 | -8.615850e-47 |
| Msa0512130 | Msa0715760 | 0.812114 | 4.990187e-51 | -8.615850e-47 |
| Msa0517300 | Msa0715760 | 0.829924 | 3.919990e-55 | -8.615850e-47 |
| Msa0524050 | Msa0715760 | 0.817578 | 3.067212e-52 | -8.615850e-47 |
| Msa0530930 | Msa0715760 | 0.825077 | 5.704874e-54 | -8.615850e-47 |
| Msa0545350 | Msa0715760 | 0.805993 | 1.020746e-49 | -8.615850e-47 |
| Msa0567290 | Msa0715760 | 0.808202 | 3.478160e-50 | -8.615850e-47 |
| Msa0575450 | Msa0715760 | 0.809852 | 1.541594e-50 | -8.615850e-47 |
| Msa0587900 | Msa0715760 | 0.806373 | 8.489220e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715760 | MtrunA17_Chr5g0403121 | 90.578 | 329 | 5 | 1 | 1 | 303 | 1 | 329 | 0.0 | 594 |
| Msa0715760 | MtrunA17_Chr8g0373961 | 83.183 | 333 | 22 | 3 | 1 | 303 | 1 | 329 | 0.0 | 544 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715760 | AT3G50820.1 | 71.988 | 332 | 62 | 3 | 1 | 302 | 1 | 331 | 5.42e-170 | 474 |
| Msa0715760 | AT5G66570.1 | 71.386 | 332 | 65 | 2 | 1 | 302 | 1 | 332 | 2.30e-168 | 470 |
| Msa0715760 | AT4G37230.1 | 52.047 | 171 | 51 | 6 | 134 | 302 | 1 | 142 | 1.09e-39 | 136 |
Find 69 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCCTTCTGATACTGATTT+AGG | 0.160157 | 5_1:+8914472 | Msa0715760:CDS |
| CCAATAACCTCACCAGTTTC+AGG | 0.203602 | 5_1:-8914433 | None:intergenic |
| TTACCGGGGTTCGTCGTTCT+TGG | 0.213397 | 5_1:+8914258 | Msa0715760:CDS |
| CCTGAAACTGGTGAGGTTAT+TGG | 0.247641 | 5_1:+8914433 | Msa0715760:CDS |
| CAATCCATTTCTAAGGCTTT+TGG | 0.269832 | 5_1:+8912674 | Msa0715760:CDS |
| GCTGATTCTGCTAAAATTGC+AGG | 0.285283 | 5_1:+8912755 | Msa0715760:CDS |
| TCGTCGAAGGTTAGTCGTTT+TGG | 0.300210 | 5_1:-8913718 | None:intergenic |
| GTCGACACAATCCATTTCTA+AGG | 0.337483 | 5_1:+8912667 | Msa0715760:CDS |
| TTGAAGCACCTCTTCCCTTT+GGG | 0.337829 | 5_1:-8914282 | None:intergenic |
| GTTGAAGCACCTCTTCCCTT+TGG | 0.352982 | 5_1:-8914283 | None:intergenic |
| AATGGCACGCGCTCGCCTCC+GGG | 0.375753 | 5_1:-8914163 | None:intergenic |
| GAATGGCACGCGCTCGCCTC+CGG | 0.390869 | 5_1:-8914164 | None:intergenic |
| ACGAGTATTGATACCAATCT+TGG | 0.394729 | 5_1:-8912624 | None:intergenic |
| ACCTTGAATCTTAACATCCT+TGG | 0.405144 | 5_1:-8914506 | None:intergenic |
| ATCAAACAGCTGGTAGCATC+AGG | 0.407109 | 5_1:+8914196 | Msa0715760:CDS |
| ATGTTAAGATTCAAGGTGTT+TGG | 0.408713 | 5_1:+8914512 | Msa0715760:CDS |
| TCTGATCCACCTTCAATTGT+TGG | 0.408802 | 5_1:-8913796 | None:intergenic |
| GGGAAGCCAGACAGCTTTAG+TGG | 0.418153 | 5_1:+8914217 | Msa0715760:CDS |
| TAAGCCAAAAGCCTTAGAAA+TGG | 0.422060 | 5_1:-8912678 | None:intergenic |
| ACTCAAAGTAAGCCTGAAAC+TGG | 0.431462 | 5_1:+8914421 | Msa0715760:CDS |
| CCTTGAATCTTAACATCCTT+GGG | 0.435110 | 5_1:-8914505 | None:intergenic |
| TACTTAGAAGTGAAGGGAAC+AGG | 0.437908 | 5_1:+8913757 | Msa0715760:CDS |
| CCCAAGGATGTTAAGATTCA+AGG | 0.446599 | 5_1:+8914505 | Msa0715760:CDS |
| CTCATGCAACCAACCAAGAT+TGG | 0.454658 | 5_1:+8912611 | Msa0715760:CDS |
| TGCAACAGCATTGTCATAAC+CGG | 0.457996 | 5_1:-8914305 | None:intergenic |
| AATGCTGTTGCATTGCCTGC+TGG | 0.460248 | 5_1:+8914316 | Msa0715760:CDS |
| AACTCTCCACTAAAGCTGTC+TGG | 0.465144 | 5_1:-8914223 | None:intergenic |
| AAGAGTGCTGCATCATCTAA+AGG | 0.475269 | 5_1:+8914379 | Msa0715760:CDS |
| AGAGTGCTGCATCATCTAAA+GGG | 0.482785 | 5_1:+8914380 | Msa0715760:CDS |
| CACCTTCAATTGTTGGACAT+TGG | 0.483659 | 5_1:-8913789 | None:intergenic |
| AGAGGTGATGAGGAAGAACT+TGG | 0.484944 | 5_1:+8914343 | Msa0715760:CDS |
| GCATTGCCTGCTGGTGGAAG+AGG | 0.486166 | 5_1:+8914325 | Msa0715760:CDS |
| AAGGGAAGAGGTGCTTCAAC+CGG | 0.493608 | 5_1:+8914286 | Msa0715760:CDS |
| TACACGTTGGACGAGATAGA+AGG | 0.497333 | 5_1:+8914058 | Msa0715760:CDS |
| GTCAAATTCGAGGAGAAAGA+TGG | 0.504940 | 5_1:+8914109 | Msa0715760:CDS |
| CTCGAATTTGACTGTACCGT+CGG | 0.508206 | 5_1:-8914098 | None:intergenic |
| AACCAATGTCCAACAATTGA+AGG | 0.514893 | 5_1:+8913787 | Msa0715760:CDS |
| AACGACGAACCCCGGTAAGA+TGG | 0.516837 | 5_1:-8914253 | None:intergenic |
| CTCGCCTCCGGGGAGCTGAA+CGG | 0.517262 | 5_1:-8914152 | None:intergenic |
| GCTGTGACCGTTCAGCTCCC+CGG | 0.518479 | 5_1:+8914145 | Msa0715760:CDS |
| TGATGAGGAAGAACTTGGTA+AGG | 0.524502 | 5_1:+8914348 | Msa0715760:CDS |
| TTTGCTCTGGATTTCGTCGA+AGG | 0.528283 | 5_1:-8913731 | None:intergenic |
| GCTGTTGCATTGCCTGCTGG+TGG | 0.543034 | 5_1:+8914319 | Msa0715760:CDS |
| TTCGTCGTTCTTGGACCCAA+AGG | 0.545177 | 5_1:+8914267 | Msa0715760:CDS |
| TCATCACCTCTTCCACCAGC+AGG | 0.551226 | 5_1:-8914331 | None:intergenic |
| TCGTCGTTCTTGGACCCAAA+GGG | 0.558970 | 5_1:+8914268 | Msa0715760:CDS |
| TTCTTGGACCCAAAGGGAAG+AGG | 0.559306 | 5_1:+8914274 | Msa0715760:CDS |
| GTATTGATACCAATCTTGGT+TGG | 0.560350 | 5_1:-8912620 | None:intergenic |
| CAAAACATACTTAGAAGTGA+AGG | 0.565667 | 5_1:+8913750 | Msa0715760:CDS |
| TGTTTGATCGTGAAGAGGAA+TGG | 0.568461 | 5_1:-8914181 | None:intergenic |
| TCGAATTTGACTGTACCGTC+GGG | 0.577896 | 5_1:-8914097 | None:intergenic |
| CCTCTTCACGATCAAACAGC+TGG | 0.583565 | 5_1:+8914186 | Msa0715760:CDS |
| ATTCAGGGAGCAAGTGCAGA+AGG | 0.584209 | 5_1:+8913691 | Msa0715760:intron |
| ATGGCACGCGCTCGCCTCCG+GGG | 0.587884 | 5_1:-8914162 | None:intergenic |
| TTTAGGTGCTAAAGCTCCCA+AGG | 0.594637 | 5_1:+8914489 | Msa0715760:CDS |
| CGACGGTACAGTCAAATTCG+AGG | 0.597395 | 5_1:+8914099 | Msa0715760:CDS |
| CCAGCTGTTTGATCGTGAAG+AGG | 0.599218 | 5_1:-8914186 | None:intergenic |
| AAAACATACTTAGAAGTGAA+GGG | 0.614649 | 5_1:+8913751 | Msa0715760:CDS |
| GCACCTAAATCAGTATCAGA+AGG | 0.614956 | 5_1:-8914475 | None:intergenic |
| TACAGAGACAACAAGAGCAG+AGG | 0.623762 | 5_1:-8912792 | None:intergenic |
| GGTCCAAGAACGACGAACCC+CGG | 0.627898 | 5_1:-8914261 | None:intergenic |
| CCGTCGGGAGATACTTCGAA+TGG | 0.639931 | 5_1:-8914082 | None:intergenic |
| GACGCGCTTGACATACACGT+TGG | 0.644692 | 5_1:+8914045 | Msa0715760:CDS |
| TCAAACAGCTGGTAGCATCA+GGG | 0.645146 | 5_1:+8914197 | Msa0715760:CDS |
| AAGTAAGCCTGAAACTGGTG+AGG | 0.648410 | 5_1:+8914426 | Msa0715760:CDS |
| TCATTCACAGTGAAATCCGA+AGG | 0.662161 | 5_1:+8913977 | Msa0715760:intron |
| TGCTGGTGGAAGAGGTGATG+AGG | 0.663134 | 5_1:+8914333 | Msa0715760:CDS |
| CCATTCGAAGTATCTCCCGA+CGG | 0.722031 | 5_1:+8914082 | Msa0715760:CDS |
| GTGACCGTTCAGCTCCCCGG+AGG | 0.722824 | 5_1:+8914148 | Msa0715760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATGAGATTATAAAATTAA+TGG | - | chr5_1:8913348-8913367 | None:intergenic | 10.0% |
| !! | TTATGAGATTATAAAATTAA+TGG | - | chr5_1:8913348-8913367 | None:intergenic | 10.0% |
| !!! | TAAAAGTTGCTTTTATTTTT+CGG | + | chr5_1:8912907-8912926 | Msa0715760:intron | 15.0% |
| !!! | GTGTATTTTTATTATAGTTA+TGG | - | chr5_1:8913030-8913049 | None:intergenic | 15.0% |
| !!! | TAAAAGTTGCTTTTATTTTT+CGG | + | chr5_1:8912907-8912926 | Msa0715760:intron | 15.0% |
| !!! | GTGTATTTTTATTATAGTTA+TGG | - | chr5_1:8913030-8913049 | None:intergenic | 15.0% |
| !! | TAATTTAACTAAAGATGACT+TGG | - | chr5_1:8913120-8913139 | None:intergenic | 20.0% |
| !!! | ATAAAATTAATGGACTGTTT+AGG | - | chr5_1:8913338-8913357 | None:intergenic | 20.0% |
| !! | CTTAACAAAAATTAAAACTC+AGG | + | chr5_1:8913460-8913479 | Msa0715760:intron | 20.0% |
| !! | TTGTGGAATTAATAATATTC+AGG | + | chr5_1:8913675-8913694 | Msa0715760:intron | 20.0% |
| !! | TGTGGAATTAATAATATTCA+GGG | + | chr5_1:8913676-8913695 | Msa0715760:intron | 20.0% |
| !! | TAATTTAACTAAAGATGACT+TGG | - | chr5_1:8913120-8913139 | None:intergenic | 20.0% |
| !!! | ATAAAATTAATGGACTGTTT+AGG | - | chr5_1:8913338-8913357 | None:intergenic | 20.0% |
| !! | CTTAACAAAAATTAAAACTC+AGG | + | chr5_1:8913460-8913479 | Msa0715760:intron | 20.0% |
| !! | TTGTGGAATTAATAATATTC+AGG | + | chr5_1:8913675-8913694 | Msa0715760:intron | 20.0% |
| !! | TGTGGAATTAATAATATTCA+GGG | + | chr5_1:8913676-8913695 | Msa0715760:intron | 20.0% |
| !! | TTTTATTATAGTTATGGTGC+AGG | - | chr5_1:8913024-8913043 | None:intergenic | 25.0% |
| ! | TTACGTACATTAATTGATCT+TGG | + | chr5_1:8913054-8913073 | Msa0715760:intron | 25.0% |
| !!! | TTTTAAGTTTCAGATTGTCT+CGG | + | chr5_1:8913382-8913401 | Msa0715760:intron | 25.0% |
| !! | TTTTGCTAAACTTAATAACG+AGG | + | chr5_1:8913532-8913551 | Msa0715760:intron | 25.0% |
| ! | TTTGCTAAACTTAATAACGA+GGG | + | chr5_1:8913533-8913552 | Msa0715760:intron | 25.0% |
| ! | TGATTGACTAATGATTATTG+TGG | + | chr5_1:8913658-8913677 | Msa0715760:intron | 25.0% |
| ! | AAAACATACTTAGAAGTGAA+GGG | + | chr5_1:8913751-8913770 | Msa0715760:CDS | 25.0% |
| !! | TTTTATTATAGTTATGGTGC+AGG | - | chr5_1:8913024-8913043 | None:intergenic | 25.0% |
| ! | TTACGTACATTAATTGATCT+TGG | + | chr5_1:8913054-8913073 | Msa0715760:intron | 25.0% |
| !!! | TTTTAAGTTTCAGATTGTCT+CGG | + | chr5_1:8913382-8913401 | Msa0715760:intron | 25.0% |
| !! | TTTTGCTAAACTTAATAACG+AGG | + | chr5_1:8913532-8913551 | Msa0715760:intron | 25.0% |
| ! | TTTGCTAAACTTAATAACGA+GGG | + | chr5_1:8913533-8913552 | Msa0715760:intron | 25.0% |
| ! | TGATTGACTAATGATTATTG+TGG | + | chr5_1:8913658-8913677 | Msa0715760:intron | 25.0% |
| ! | AAAACATACTTAGAAGTGAA+GGG | + | chr5_1:8913751-8913770 | Msa0715760:CDS | 25.0% |
| !! | TTGTCTCGGTTTATTTTTCT+CGG | + | chr5_1:8912880-8912899 | Msa0715760:intron | 30.0% |
| !! | GTTGTTTTGCAAAATCTACT+AGG | - | chr5_1:8912985-8913004 | None:intergenic | 30.0% |
| GAAATTCAAATCCTAACAAG+TGG | + | chr5_1:8913208-8913227 | Msa0715760:intron | 30.0% | |
| !!! | TTTTCTCTAGCCTTATACTT+GGG | - | chr5_1:8913292-8913311 | None:intergenic | 30.0% |
| TTCTCGAATAAAATTGCTTC+TGG | - | chr5_1:8913425-8913444 | None:intergenic | 30.0% | |
| TGAAAAATATACAAGACCCT+AGG | - | chr5_1:8913567-8913586 | None:intergenic | 30.0% | |
| CAAAACATACTTAGAAGTGA+AGG | + | chr5_1:8913750-8913769 | Msa0715760:CDS | 30.0% | |
| !! | ATTGTATTTTCCTGACTTGA+AGG | - | chr5_1:8913830-8913849 | None:intergenic | 30.0% |
| !!! | TTTGTGTTTTGGAAATCAAG+CGG | - | chr5_1:8914019-8914038 | None:intergenic | 30.0% |
| ! | ATGTTAAGATTCAAGGTGTT+TGG | + | chr5_1:8914512-8914531 | Msa0715760:CDS | 30.0% |
| !! | TTGTCTCGGTTTATTTTTCT+CGG | + | chr5_1:8912880-8912899 | Msa0715760:intron | 30.0% |
| !! | GTTGTTTTGCAAAATCTACT+AGG | - | chr5_1:8912985-8913004 | None:intergenic | 30.0% |
| GAAATTCAAATCCTAACAAG+TGG | + | chr5_1:8913208-8913227 | Msa0715760:intron | 30.0% | |
| !!! | TTTTCTCTAGCCTTATACTT+GGG | - | chr5_1:8913292-8913311 | None:intergenic | 30.0% |
| TTCTCGAATAAAATTGCTTC+TGG | - | chr5_1:8913425-8913444 | None:intergenic | 30.0% | |
| TGAAAAATATACAAGACCCT+AGG | - | chr5_1:8913567-8913586 | None:intergenic | 30.0% | |
| CAAAACATACTTAGAAGTGA+AGG | + | chr5_1:8913750-8913769 | Msa0715760:CDS | 30.0% | |
| !! | ATTGTATTTTCCTGACTTGA+AGG | - | chr5_1:8913830-8913849 | None:intergenic | 30.0% |
| !!! | TTTGTGTTTTGGAAATCAAG+CGG | - | chr5_1:8914019-8914038 | None:intergenic | 30.0% |
| ! | ATGTTAAGATTCAAGGTGTT+TGG | + | chr5_1:8914512-8914531 | Msa0715760:CDS | 30.0% |
| ! | GTATTGATACCAATCTTGGT+TGG | - | chr5_1:8912623-8912642 | None:intergenic | 35.0% |
| !! | ACGAGTATTGATACCAATCT+TGG | - | chr5_1:8912627-8912646 | None:intergenic | 35.0% |
| !!! | CAATCCATTTCTAAGGCTTT+TGG | + | chr5_1:8912674-8912693 | Msa0715760:CDS | 35.0% |
| TAAGCCAAAAGCCTTAGAAA+TGG | - | chr5_1:8912681-8912700 | None:intergenic | 35.0% | |
| ! | GCACTTTGATTAAGTTGTCT+CGG | + | chr5_1:8912866-8912885 | Msa0715760:intron | 35.0% |
| TTATAGTTATGGTGCAGGAT+TGG | - | chr5_1:8913019-8913038 | None:intergenic | 35.0% | |
| TTTCACATAAGCCACTTGTT+AGG | - | chr5_1:8913222-8913241 | None:intergenic | 35.0% | |
| !!! | GTTTTCTCTAGCCTTATACT+TGG | - | chr5_1:8913293-8913312 | None:intergenic | 35.0% |
| ! | CTTCTAAGTATGTTTTGCTC+TGG | - | chr5_1:8913747-8913766 | None:intergenic | 35.0% |
| AACCAATGTCCAACAATTGA+AGG | + | chr5_1:8913787-8913806 | Msa0715760:CDS | 35.0% | |
| GATTTCACTGTGAATGAAGT+TGG | - | chr5_1:8913974-8913993 | None:intergenic | 35.0% | |
| !!! | TTGTGTTTTGGAAATCAAGC+GGG | - | chr5_1:8914018-8914037 | None:intergenic | 35.0% |
| !!! | AGTTTTTAGTGCCATCTTAC+CGG | + | chr5_1:8914242-8914261 | Msa0715760:CDS | 35.0% |
| CCTTGAATCTTAACATCCTT+GGG | - | chr5_1:8914508-8914527 | None:intergenic | 35.0% | |
| ACCTTGAATCTTAACATCCT+TGG | - | chr5_1:8914509-8914528 | None:intergenic | 35.0% | |
| ! | GTATTGATACCAATCTTGGT+TGG | - | chr5_1:8912623-8912642 | None:intergenic | 35.0% |
| !! | ACGAGTATTGATACCAATCT+TGG | - | chr5_1:8912627-8912646 | None:intergenic | 35.0% |
| !!! | CAATCCATTTCTAAGGCTTT+TGG | + | chr5_1:8912674-8912693 | Msa0715760:CDS | 35.0% |
| TAAGCCAAAAGCCTTAGAAA+TGG | - | chr5_1:8912681-8912700 | None:intergenic | 35.0% | |
| ! | GCACTTTGATTAAGTTGTCT+CGG | + | chr5_1:8912866-8912885 | Msa0715760:intron | 35.0% |
| TTATAGTTATGGTGCAGGAT+TGG | - | chr5_1:8913019-8913038 | None:intergenic | 35.0% | |
| TTTCACATAAGCCACTTGTT+AGG | - | chr5_1:8913222-8913241 | None:intergenic | 35.0% | |
| !!! | GTTTTCTCTAGCCTTATACT+TGG | - | chr5_1:8913293-8913312 | None:intergenic | 35.0% |
| ! | CTTCTAAGTATGTTTTGCTC+TGG | - | chr5_1:8913747-8913766 | None:intergenic | 35.0% |
| AACCAATGTCCAACAATTGA+AGG | + | chr5_1:8913787-8913806 | Msa0715760:CDS | 35.0% | |
| GATTTCACTGTGAATGAAGT+TGG | - | chr5_1:8913974-8913993 | None:intergenic | 35.0% | |
| !!! | TTGTGTTTTGGAAATCAAGC+GGG | - | chr5_1:8914018-8914037 | None:intergenic | 35.0% |
| !!! | AGTTTTTAGTGCCATCTTAC+CGG | + | chr5_1:8914242-8914261 | Msa0715760:CDS | 35.0% |
| CCTTGAATCTTAACATCCTT+GGG | - | chr5_1:8914508-8914527 | None:intergenic | 35.0% | |
| ACCTTGAATCTTAACATCCT+TGG | - | chr5_1:8914509-8914528 | None:intergenic | 35.0% | |
| GTCGACACAATCCATTTCTA+AGG | + | chr5_1:8912667-8912686 | Msa0715760:CDS | 40.0% | |
| !!! | GCTTTTGGCTTAGAACACAA+TGG | + | chr5_1:8912689-8912708 | Msa0715760:CDS | 40.0% |
| ! | GCTGATTCTGCTAAAATTGC+AGG | + | chr5_1:8912755-8912774 | Msa0715760:CDS | 40.0% |
| !! | TCTCGGTTTATTTTTCTCGG+AGG | + | chr5_1:8912883-8912902 | Msa0715760:intron | 40.0% |
| ! | ATGGACTGTTTAGGAAGCTA+AGG | - | chr5_1:8913329-8913348 | None:intergenic | 40.0% |
| !!! | GACACGTTTTGAGTTTGCAA+GGG | + | chr5_1:8913486-8913505 | Msa0715760:intron | 40.0% |
| TACTTAGAAGTGAAGGGAAC+AGG | + | chr5_1:8913757-8913776 | Msa0715760:CDS | 40.0% | |
| CACCTTCAATTGTTGGACAT+TGG | - | chr5_1:8913792-8913811 | None:intergenic | 40.0% | |
| CAATGTCCAACAATTGAAGG+TGG | + | chr5_1:8913790-8913809 | Msa0715760:intron | 40.0% | |
| TCTGATCCACCTTCAATTGT+TGG | - | chr5_1:8913799-8913818 | None:intergenic | 40.0% | |
| TCATTCACAGTGAAATCCGA+AGG | + | chr5_1:8913977-8913996 | Msa0715760:intron | 40.0% | |
| !!! | GGAGTTTTTGGTTACACCTT+CGG | - | chr5_1:8913996-8914015 | None:intergenic | 40.0% |
| !!! | TGTGTTTTGGAAATCAAGCG+GGG | - | chr5_1:8914017-8914036 | None:intergenic | 40.0% |
| !! | GCGTCATCAGTTTTGTGTTT+TGG | - | chr5_1:8914030-8914049 | None:intergenic | 40.0% |
| GTCAAATTCGAGGAGAAAGA+TGG | + | chr5_1:8914109-8914128 | Msa0715760:CDS | 40.0% | |
| TGTTTGATCGTGAAGAGGAA+TGG | - | chr5_1:8914184-8914203 | None:intergenic | 40.0% | |
| !!! | GTTTTTAGTGCCATCTTACC+GGG | + | chr5_1:8914243-8914262 | Msa0715760:CDS | 40.0% |
| !! | TTTTTAGTGCCATCTTACCG+GGG | + | chr5_1:8914244-8914263 | Msa0715760:CDS | 40.0% |
| TGCAACAGCATTGTCATAAC+CGG | - | chr5_1:8914308-8914327 | None:intergenic | 40.0% | |
| TGATGAGGAAGAACTTGGTA+AGG | + | chr5_1:8914348-8914367 | Msa0715760:CDS | 40.0% | |
| !! | AAGAGTGCTGCATCATCTAA+AGG | + | chr5_1:8914379-8914398 | Msa0715760:CDS | 40.0% |
| !! | AGAGTGCTGCATCATCTAAA+GGG | + | chr5_1:8914380-8914399 | Msa0715760:CDS | 40.0% |
| ACTCAAAGTAAGCCTGAAAC+TGG | + | chr5_1:8914421-8914440 | Msa0715760:CDS | 40.0% | |
| !! | CAGCCTTCTGATACTGATTT+AGG | + | chr5_1:8914472-8914491 | Msa0715760:CDS | 40.0% |
| GCACCTAAATCAGTATCAGA+AGG | - | chr5_1:8914478-8914497 | None:intergenic | 40.0% | |
| CCCAAGGATGTTAAGATTCA+AGG | + | chr5_1:8914505-8914524 | Msa0715760:CDS | 40.0% | |
| GTCGACACAATCCATTTCTA+AGG | + | chr5_1:8912667-8912686 | Msa0715760:CDS | 40.0% | |
| !!! | GCTTTTGGCTTAGAACACAA+TGG | + | chr5_1:8912689-8912708 | Msa0715760:CDS | 40.0% |
| ! | GCTGATTCTGCTAAAATTGC+AGG | + | chr5_1:8912755-8912774 | Msa0715760:CDS | 40.0% |
| !! | TCTCGGTTTATTTTTCTCGG+AGG | + | chr5_1:8912883-8912902 | Msa0715760:intron | 40.0% |
| ! | ATGGACTGTTTAGGAAGCTA+AGG | - | chr5_1:8913329-8913348 | None:intergenic | 40.0% |
| !!! | GACACGTTTTGAGTTTGCAA+GGG | + | chr5_1:8913486-8913505 | Msa0715760:intron | 40.0% |
| TACTTAGAAGTGAAGGGAAC+AGG | + | chr5_1:8913757-8913776 | Msa0715760:CDS | 40.0% | |
| CACCTTCAATTGTTGGACAT+TGG | - | chr5_1:8913792-8913811 | None:intergenic | 40.0% | |
| CAATGTCCAACAATTGAAGG+TGG | + | chr5_1:8913790-8913809 | Msa0715760:intron | 40.0% | |
| TCTGATCCACCTTCAATTGT+TGG | - | chr5_1:8913799-8913818 | None:intergenic | 40.0% | |
| TCATTCACAGTGAAATCCGA+AGG | + | chr5_1:8913977-8913996 | Msa0715760:intron | 40.0% | |
| !!! | GGAGTTTTTGGTTACACCTT+CGG | - | chr5_1:8913996-8914015 | None:intergenic | 40.0% |
| !!! | TGTGTTTTGGAAATCAAGCG+GGG | - | chr5_1:8914017-8914036 | None:intergenic | 40.0% |
| !! | GCGTCATCAGTTTTGTGTTT+TGG | - | chr5_1:8914030-8914049 | None:intergenic | 40.0% |
| GTCAAATTCGAGGAGAAAGA+TGG | + | chr5_1:8914109-8914128 | Msa0715760:CDS | 40.0% | |
| TGTTTGATCGTGAAGAGGAA+TGG | - | chr5_1:8914184-8914203 | None:intergenic | 40.0% | |
| !!! | GTTTTTAGTGCCATCTTACC+GGG | + | chr5_1:8914243-8914262 | Msa0715760:CDS | 40.0% |
| !! | TTTTTAGTGCCATCTTACCG+GGG | + | chr5_1:8914244-8914263 | Msa0715760:CDS | 40.0% |
| TGCAACAGCATTGTCATAAC+CGG | - | chr5_1:8914308-8914327 | None:intergenic | 40.0% | |
| TGATGAGGAAGAACTTGGTA+AGG | + | chr5_1:8914348-8914367 | Msa0715760:CDS | 40.0% | |
| !! | AAGAGTGCTGCATCATCTAA+AGG | + | chr5_1:8914379-8914398 | Msa0715760:CDS | 40.0% |
| !! | AGAGTGCTGCATCATCTAAA+GGG | + | chr5_1:8914380-8914399 | Msa0715760:CDS | 40.0% |
| ACTCAAAGTAAGCCTGAAAC+TGG | + | chr5_1:8914421-8914440 | Msa0715760:CDS | 40.0% | |
| !! | CAGCCTTCTGATACTGATTT+AGG | + | chr5_1:8914472-8914491 | Msa0715760:CDS | 40.0% |
| GCACCTAAATCAGTATCAGA+AGG | - | chr5_1:8914478-8914497 | None:intergenic | 40.0% | |
| CCCAAGGATGTTAAGATTCA+AGG | + | chr5_1:8914505-8914524 | Msa0715760:CDS | 40.0% | |
| CTCATGCAACCAACCAAGAT+TGG | + | chr5_1:8912611-8912630 | Msa0715760:CDS | 45.0% | |
| TACAGAGACAACAAGAGCAG+AGG | - | chr5_1:8912795-8912814 | None:intergenic | 45.0% | |
| GAACTAAATTATGCCCCGCT+TGG | + | chr5_1:8912932-8912951 | Msa0715760:intron | 45.0% | |
| TATACTTGGGCTTAGCCCTA+GGG | - | chr5_1:8913279-8913298 | None:intergenic | 45.0% | |
| TTATACTTGGGCTTAGCCCT+AGG | - | chr5_1:8913280-8913299 | None:intergenic | 45.0% | |
| TAGGGCTAAGCCCAAGTATA+AGG | + | chr5_1:8913279-8913298 | Msa0715760:intron | 45.0% | |
| AAGCTAAGGCTTGAGAAGTG+GGG | - | chr5_1:8913315-8913334 | None:intergenic | 45.0% | |
| GAAGCTAAGGCTTGAGAAGT+GGG | - | chr5_1:8913316-8913335 | None:intergenic | 45.0% | |
| !!! | CGACACGTTTTGAGTTTGCA+AGG | + | chr5_1:8913485-8913504 | Msa0715760:intron | 45.0% |
| TAACGAGGGTCTATGAACCT+AGG | + | chr5_1:8913547-8913566 | Msa0715760:intron | 45.0% | |
| AACGAGGGTCTATGAACCTA+GGG | + | chr5_1:8913548-8913567 | Msa0715760:intron | 45.0% | |
| !! | TCGTCGAAGGTTAGTCGTTT+TGG | - | chr5_1:8913721-8913740 | None:intergenic | 45.0% |
| ! | TTTGCTCTGGATTTCGTCGA+AGG | - | chr5_1:8913734-8913753 | None:intergenic | 45.0% |
| GACTCATTCTCCTTCAAGTC+AGG | + | chr5_1:8913817-8913836 | Msa0715760:intron | 45.0% | |
| ! | GAAATCAAGCGGGGAGTTTT+TGG | - | chr5_1:8914008-8914027 | None:intergenic | 45.0% |
| TACACGTTGGACGAGATAGA+AGG | + | chr5_1:8914058-8914077 | Msa0715760:CDS | 45.0% | |
| TCGAATTTGACTGTACCGTC+GGG | - | chr5_1:8914100-8914119 | None:intergenic | 45.0% | |
| CTCGAATTTGACTGTACCGT+CGG | - | chr5_1:8914101-8914120 | None:intergenic | 45.0% | |
| ATCAAACAGCTGGTAGCATC+AGG | + | chr5_1:8914196-8914215 | Msa0715760:CDS | 45.0% | |
| TCAAACAGCTGGTAGCATCA+GGG | + | chr5_1:8914197-8914216 | Msa0715760:CDS | 45.0% | |
| AACTCTCCACTAAAGCTGTC+TGG | - | chr5_1:8914226-8914245 | None:intergenic | 45.0% | |
| ! | TTGAAGCACCTCTTCCCTTT+GGG | - | chr5_1:8914285-8914304 | None:intergenic | 45.0% |
| AGAGGTGATGAGGAAGAACT+TGG | + | chr5_1:8914343-8914362 | Msa0715760:CDS | 45.0% | |
| AAGTAAGCCTGAAACTGGTG+AGG | + | chr5_1:8914426-8914445 | Msa0715760:CDS | 45.0% | |
| CCAATAACCTCACCAGTTTC+AGG | - | chr5_1:8914436-8914455 | None:intergenic | 45.0% | |
| CCTGAAACTGGTGAGGTTAT+TGG | + | chr5_1:8914433-8914452 | Msa0715760:CDS | 45.0% | |
| TTTAGGTGCTAAAGCTCCCA+AGG | + | chr5_1:8914489-8914508 | Msa0715760:CDS | 45.0% | |
| CTCATGCAACCAACCAAGAT+TGG | + | chr5_1:8912611-8912630 | Msa0715760:CDS | 45.0% | |
| TACAGAGACAACAAGAGCAG+AGG | - | chr5_1:8912795-8912814 | None:intergenic | 45.0% | |
| GAACTAAATTATGCCCCGCT+TGG | + | chr5_1:8912932-8912951 | Msa0715760:intron | 45.0% | |
| TATACTTGGGCTTAGCCCTA+GGG | - | chr5_1:8913279-8913298 | None:intergenic | 45.0% | |
| TTATACTTGGGCTTAGCCCT+AGG | - | chr5_1:8913280-8913299 | None:intergenic | 45.0% | |
| TAGGGCTAAGCCCAAGTATA+AGG | + | chr5_1:8913279-8913298 | Msa0715760:intron | 45.0% | |
| AAGCTAAGGCTTGAGAAGTG+GGG | - | chr5_1:8913315-8913334 | None:intergenic | 45.0% | |
| GAAGCTAAGGCTTGAGAAGT+GGG | - | chr5_1:8913316-8913335 | None:intergenic | 45.0% | |
| !!! | CGACACGTTTTGAGTTTGCA+AGG | + | chr5_1:8913485-8913504 | Msa0715760:intron | 45.0% |
| TAACGAGGGTCTATGAACCT+AGG | + | chr5_1:8913547-8913566 | Msa0715760:intron | 45.0% | |
| AACGAGGGTCTATGAACCTA+GGG | + | chr5_1:8913548-8913567 | Msa0715760:intron | 45.0% | |
| !! | TCGTCGAAGGTTAGTCGTTT+TGG | - | chr5_1:8913721-8913740 | None:intergenic | 45.0% |
| ! | TTTGCTCTGGATTTCGTCGA+AGG | - | chr5_1:8913734-8913753 | None:intergenic | 45.0% |
| GACTCATTCTCCTTCAAGTC+AGG | + | chr5_1:8913817-8913836 | Msa0715760:intron | 45.0% | |
| ! | GAAATCAAGCGGGGAGTTTT+TGG | - | chr5_1:8914008-8914027 | None:intergenic | 45.0% |
| TACACGTTGGACGAGATAGA+AGG | + | chr5_1:8914058-8914077 | Msa0715760:CDS | 45.0% | |
| TCGAATTTGACTGTACCGTC+GGG | - | chr5_1:8914100-8914119 | None:intergenic | 45.0% | |
| CTCGAATTTGACTGTACCGT+CGG | - | chr5_1:8914101-8914120 | None:intergenic | 45.0% | |
| ATCAAACAGCTGGTAGCATC+AGG | + | chr5_1:8914196-8914215 | Msa0715760:CDS | 45.0% | |
| TCAAACAGCTGGTAGCATCA+GGG | + | chr5_1:8914197-8914216 | Msa0715760:CDS | 45.0% | |
| AACTCTCCACTAAAGCTGTC+TGG | - | chr5_1:8914226-8914245 | None:intergenic | 45.0% | |
| ! | TTGAAGCACCTCTTCCCTTT+GGG | - | chr5_1:8914285-8914304 | None:intergenic | 45.0% |
| AGAGGTGATGAGGAAGAACT+TGG | + | chr5_1:8914343-8914362 | Msa0715760:CDS | 45.0% | |
| AAGTAAGCCTGAAACTGGTG+AGG | + | chr5_1:8914426-8914445 | Msa0715760:CDS | 45.0% | |
| CCAATAACCTCACCAGTTTC+AGG | - | chr5_1:8914436-8914455 | None:intergenic | 45.0% | |
| CCTGAAACTGGTGAGGTTAT+TGG | + | chr5_1:8914433-8914452 | Msa0715760:CDS | 45.0% | |
| TTTAGGTGCTAAAGCTCCCA+AGG | + | chr5_1:8914489-8914508 | Msa0715760:CDS | 45.0% | |
| TGACCCATTTCAGTCCAAGC+GGG | - | chr5_1:8912949-8912968 | None:intergenic | 50.0% | |
| GTGACCCATTTCAGTCCAAG+CGG | - | chr5_1:8912950-8912969 | None:intergenic | 50.0% | |
| TTGTGTGTTTCCGTCTCCCT+AGG | + | chr5_1:8913260-8913279 | Msa0715760:intron | 50.0% | |
| TGTGTGTTTCCGTCTCCCTA+GGG | + | chr5_1:8913261-8913280 | Msa0715760:intron | 50.0% | |
| GGAAGCTAAGGCTTGAGAAG+TGG | - | chr5_1:8913317-8913336 | None:intergenic | 50.0% | |
| ATTCAGGGAGCAAGTGCAGA+AGG | + | chr5_1:8913691-8913710 | Msa0715760:intron | 50.0% | |
| ! | CCATTCGAAGTATCTCCCGA+CGG | + | chr5_1:8914082-8914101 | Msa0715760:CDS | 50.0% |
| CGACGGTACAGTCAAATTCG+AGG | + | chr5_1:8914099-8914118 | Msa0715760:CDS | 50.0% | |
| CCAGCTGTTTGATCGTGAAG+AGG | - | chr5_1:8914189-8914208 | None:intergenic | 50.0% | |
| CCTCTTCACGATCAAACAGC+TGG | + | chr5_1:8914186-8914205 | Msa0715760:CDS | 50.0% | |
| TTCGTCGTTCTTGGACCCAA+AGG | + | chr5_1:8914267-8914286 | Msa0715760:CDS | 50.0% | |
| TCGTCGTTCTTGGACCCAAA+GGG | + | chr5_1:8914268-8914287 | Msa0715760:CDS | 50.0% | |
| TTCTTGGACCCAAAGGGAAG+AGG | + | chr5_1:8914274-8914293 | Msa0715760:CDS | 50.0% | |
| ! | GTTGAAGCACCTCTTCCCTT+TGG | - | chr5_1:8914286-8914305 | None:intergenic | 50.0% |
| !! | AAGGGAAGAGGTGCTTCAAC+CGG | + | chr5_1:8914286-8914305 | Msa0715760:CDS | 50.0% |
| AATGCTGTTGCATTGCCTGC+TGG | + | chr5_1:8914316-8914335 | Msa0715760:CDS | 50.0% | |
| TGACCCATTTCAGTCCAAGC+GGG | - | chr5_1:8912949-8912968 | None:intergenic | 50.0% | |
| GTGACCCATTTCAGTCCAAG+CGG | - | chr5_1:8912950-8912969 | None:intergenic | 50.0% | |
| TTGTGTGTTTCCGTCTCCCT+AGG | + | chr5_1:8913260-8913279 | Msa0715760:intron | 50.0% | |
| TGTGTGTTTCCGTCTCCCTA+GGG | + | chr5_1:8913261-8913280 | Msa0715760:intron | 50.0% | |
| GGAAGCTAAGGCTTGAGAAG+TGG | - | chr5_1:8913317-8913336 | None:intergenic | 50.0% | |
| ATTCAGGGAGCAAGTGCAGA+AGG | + | chr5_1:8913691-8913710 | Msa0715760:intron | 50.0% | |
| ! | CCATTCGAAGTATCTCCCGA+CGG | + | chr5_1:8914082-8914101 | Msa0715760:CDS | 50.0% |
| CGACGGTACAGTCAAATTCG+AGG | + | chr5_1:8914099-8914118 | Msa0715760:CDS | 50.0% | |
| CCAGCTGTTTGATCGTGAAG+AGG | - | chr5_1:8914189-8914208 | None:intergenic | 50.0% | |
| CCTCTTCACGATCAAACAGC+TGG | + | chr5_1:8914186-8914205 | Msa0715760:CDS | 50.0% | |
| TTCGTCGTTCTTGGACCCAA+AGG | + | chr5_1:8914267-8914286 | Msa0715760:CDS | 50.0% | |
| TCGTCGTTCTTGGACCCAAA+GGG | + | chr5_1:8914268-8914287 | Msa0715760:CDS | 50.0% | |
| TTCTTGGACCCAAAGGGAAG+AGG | + | chr5_1:8914274-8914293 | Msa0715760:CDS | 50.0% | |
| ! | GTTGAAGCACCTCTTCCCTT+TGG | - | chr5_1:8914286-8914305 | None:intergenic | 50.0% |
| !! | AAGGGAAGAGGTGCTTCAAC+CGG | + | chr5_1:8914286-8914305 | Msa0715760:CDS | 50.0% |
| AATGCTGTTGCATTGCCTGC+TGG | + | chr5_1:8914316-8914335 | Msa0715760:CDS | 50.0% | |
| ATGCCCCGCTTGGACTGAAA+TGG | + | chr5_1:8912942-8912961 | Msa0715760:intron | 55.0% | |
| TGCCCCGCTTGGACTGAAAT+GGG | + | chr5_1:8912943-8912962 | Msa0715760:intron | 55.0% | |
| GACCCATTTCAGTCCAAGCG+GGG | - | chr5_1:8912948-8912967 | None:intergenic | 55.0% | |
| GACGCGCTTGACATACACGT+TGG | + | chr5_1:8914045-8914064 | Msa0715760:CDS | 55.0% | |
| CCGTCGGGAGATACTTCGAA+TGG | - | chr5_1:8914085-8914104 | None:intergenic | 55.0% | |
| ! | GGGAAGCCAGACAGCTTTAG+TGG | + | chr5_1:8914217-8914236 | Msa0715760:CDS | 55.0% |
| AACGACGAACCCCGGTAAGA+TGG | - | chr5_1:8914256-8914275 | None:intergenic | 55.0% | |
| TTACCGGGGTTCGTCGTTCT+TGG | + | chr5_1:8914258-8914277 | Msa0715760:CDS | 55.0% | |
| TCATCACCTCTTCCACCAGC+AGG | - | chr5_1:8914334-8914353 | None:intergenic | 55.0% | |
| TGCTGGTGGAAGAGGTGATG+AGG | + | chr5_1:8914333-8914352 | Msa0715760:CDS | 55.0% | |
| ATGCCCCGCTTGGACTGAAA+TGG | + | chr5_1:8912942-8912961 | Msa0715760:intron | 55.0% | |
| TGCCCCGCTTGGACTGAAAT+GGG | + | chr5_1:8912943-8912962 | Msa0715760:intron | 55.0% | |
| GACCCATTTCAGTCCAAGCG+GGG | - | chr5_1:8912948-8912967 | None:intergenic | 55.0% | |
| GACGCGCTTGACATACACGT+TGG | + | chr5_1:8914045-8914064 | Msa0715760:CDS | 55.0% | |
| CCGTCGGGAGATACTTCGAA+TGG | - | chr5_1:8914085-8914104 | None:intergenic | 55.0% | |
| ! | GGGAAGCCAGACAGCTTTAG+TGG | + | chr5_1:8914217-8914236 | Msa0715760:CDS | 55.0% |
| AACGACGAACCCCGGTAAGA+TGG | - | chr5_1:8914256-8914275 | None:intergenic | 55.0% | |
| TTACCGGGGTTCGTCGTTCT+TGG | + | chr5_1:8914258-8914277 | Msa0715760:CDS | 55.0% | |
| TCATCACCTCTTCCACCAGC+AGG | - | chr5_1:8914334-8914353 | None:intergenic | 55.0% | |
| TGCTGGTGGAAGAGGTGATG+AGG | + | chr5_1:8914333-8914352 | Msa0715760:CDS | 55.0% | |
| TGGGCTTAGCCCTAGGGAGA+CGG | - | chr5_1:8913273-8913292 | None:intergenic | 60.0% | |
| GGTCCAAGAACGACGAACCC+CGG | - | chr5_1:8914264-8914283 | None:intergenic | 60.0% | |
| GCTGTTGCATTGCCTGCTGG+TGG | + | chr5_1:8914319-8914338 | Msa0715760:CDS | 60.0% | |
| GCATTGCCTGCTGGTGGAAG+AGG | + | chr5_1:8914325-8914344 | Msa0715760:CDS | 60.0% | |
| TGGGCTTAGCCCTAGGGAGA+CGG | - | chr5_1:8913273-8913292 | None:intergenic | 60.0% | |
| GGTCCAAGAACGACGAACCC+CGG | - | chr5_1:8914264-8914283 | None:intergenic | 60.0% | |
| GCTGTTGCATTGCCTGCTGG+TGG | + | chr5_1:8914319-8914338 | Msa0715760:CDS | 60.0% | |
| GCATTGCCTGCTGGTGGAAG+AGG | + | chr5_1:8914325-8914344 | Msa0715760:CDS | 60.0% | |
| GCTGTGACCGTTCAGCTCCC+CGG | + | chr5_1:8914145-8914164 | Msa0715760:CDS | 65.0% | |
| GCTGTGACCGTTCAGCTCCC+CGG | + | chr5_1:8914145-8914164 | Msa0715760:CDS | 65.0% | |
| GTGACCGTTCAGCTCCCCGG+AGG | + | chr5_1:8914148-8914167 | Msa0715760:CDS | 70.0% | |
| CTCGCCTCCGGGGAGCTGAA+CGG | - | chr5_1:8914155-8914174 | None:intergenic | 70.0% | |
| AATGGCACGCGCTCGCCTCC+GGG | - | chr5_1:8914166-8914185 | None:intergenic | 70.0% | |
| GAATGGCACGCGCTCGCCTC+CGG | - | chr5_1:8914167-8914186 | None:intergenic | 70.0% | |
| GTGACCGTTCAGCTCCCCGG+AGG | + | chr5_1:8914148-8914167 | Msa0715760:CDS | 70.0% | |
| CTCGCCTCCGGGGAGCTGAA+CGG | - | chr5_1:8914155-8914174 | None:intergenic | 70.0% | |
| AATGGCACGCGCTCGCCTCC+GGG | - | chr5_1:8914166-8914185 | None:intergenic | 70.0% | |
| GAATGGCACGCGCTCGCCTC+CGG | - | chr5_1:8914167-8914186 | None:intergenic | 70.0% | |
| ATGGCACGCGCTCGCCTCCG+GGG | - | chr5_1:8914165-8914184 | None:intergenic | 75.0% | |
| ATGGCACGCGCTCGCCTCCG+GGG | - | chr5_1:8914165-8914184 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 8912581 | 8914555 | 8912581 | ID=Msa0715760;Name=Msa0715760 |
| chr5_1 | mRNA | 8912581 | 8914555 | 8912581 | ID=Msa0715760-mRNA-1;Parent=Msa0715760;Name=Msa0715760-mRNA-1;_AED=0.04;_eAED=0.06;_QI=0|0|0|1|1|1|3|0|303 |
| chr5_1 | exon | 8912581 | 8912811 | 8912581 | ID=Msa0715760-mRNA-1:exon:3650;Parent=Msa0715760-mRNA-1 |
| chr5_1 | exon | 8913697 | 8913808 | 8913697 | ID=Msa0715760-mRNA-1:exon:3651;Parent=Msa0715760-mRNA-1 |
| chr5_1 | exon | 8913987 | 8914555 | 8913987 | ID=Msa0715760-mRNA-1:exon:3652;Parent=Msa0715760-mRNA-1 |
| chr5_1 | CDS | 8912581 | 8912811 | 8912581 | ID=Msa0715760-mRNA-1:cds;Parent=Msa0715760-mRNA-1 |
| chr5_1 | CDS | 8913697 | 8913808 | 8913697 | ID=Msa0715760-mRNA-1:cds;Parent=Msa0715760-mRNA-1 |
| chr5_1 | CDS | 8913987 | 8914555 | 8913987 | ID=Msa0715760-mRNA-1:cds;Parent=Msa0715760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
