AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0216900


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0216900 MtrunA17_Chr2g0318521 99.248 266 0 1 1 266 1 264 0.0 533
Msa0216900 MtrunA17_Chr5g0447531 69.288 267 69 6 10 266 2 265 6.36e-126 358
Msa0216900 MtrunA17_Chr4g0051941 69.434 265 76 4 1 265 6 265 6.54e-122 348
Msa0216900 MtrunA17_Chr6g0453181 78.440 218 45 2 48 265 49 264 5.43e-120 343
Msa0216900 MtrunA17_Chr6g0453151 77.523 218 47 2 48 265 116 331 1.65e-119 345
Msa0216900 MtrunA17_Chr6g0453141 77.523 218 47 2 48 265 49 264 7.58e-119 340
Msa0216900 MtrunA17_Chr6g0453161 78.899 218 44 2 48 265 316 531 1.09e-116 344
Msa0216900 MtrunA17_Chr6g0453161 77.523 218 47 2 48 265 51 266 3.21e-115 341
Msa0216900 MtrunA17_Chr6g0464511 63.596 228 47 2 38 265 20 211 2.00e-91 269
Msa0216900 MtrunA17_Chr6g0476641 48.361 244 110 6 16 254 42 274 1.89e-58 187
Msa0216900 MtrunA17_Chr1g0157481 40.230 261 141 4 9 254 62 322 8.28e-58 187
Msa0216900 MtrunA17_Chr6g0453171 72.727 99 26 1 168 266 1 98 3.03e-41 137
Msa0216900 MtrunA17_Chr5g0448421 41.014 217 95 8 61 254 63 269 6.42e-37 132
Msa0216900 MtrunA17_Chr5g0448411 41.014 217 95 9 61 254 61 267 4.50e-36 129
Msa0216900 MtrunA17_Chr8g0345631 34.274 248 124 10 19 250 32 256 3.87e-33 121
Msa0216900 MtrunA17_Chr3g0133901 37.624 202 94 5 65 250 68 253 4.91e-32 119
Msa0216900 MtrunA17_Chr6g0462031 37.557 221 109 9 37 254 39 233 1.04e-30 114
Msa0216900 MtrunA17_Chr2g0301081 35.909 220 97 7 51 250 60 255 1.57e-30 114
Msa0216900 MtrunA17_Chr4g0006181 35.622 233 92 7 62 251 119 336 7.75e-29 112
Msa0216900 MtrunA17_Chr3g0092091 37.255 204 92 7 64 253 62 243 1.66e-27 106
Msa0216900 MtrunA17_Chr3g0113311 41.611 149 72 5 92 240 137 270 4.53e-22 92.4
Msa0216900 MtrunA17_Chr2g0279001 34.615 208 86 7 65 243 73 259 4.76e-21 89.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0216900 AT5G54270.1 87.925 265 30 2 4 266 1 265 2.00e-174 481
Msa0216900 AT2G05070.1 68.421 266 71 6 10 265 2 264 5.94e-124 353
Msa0216900 AT2G05100.1 68.914 267 70 6 10 266 2 265 8.33e-124 353
Msa0216900 AT3G27690.1 68.302 265 79 5 2 265 5 265 2.15e-122 350
Msa0216900 AT3G27690.2 68.302 265 79 5 2 265 37 297 2.57e-122 351
Msa0216900 AT1G29930.1 70.539 241 58 4 36 265 28 266 1.07e-117 338
Msa0216900 AT1G29920.1 70.539 241 58 4 36 265 28 266 1.24e-117 338
Msa0216900 AT1G29910.1 70.539 241 58 4 36 265 28 266 1.24e-117 338
Msa0216900 AT2G34420.1 66.543 269 73 6 8 265 2 264 1.35e-117 338
Msa0216900 AT2G34430.1 71.967 239 55 4 37 265 29 265 1.97e-117 337
Msa0216900 AT2G05100.2 62.030 266 84 7 10 261 2 264 4.37e-103 303
Msa0216900 AT1G76570.1 46.977 215 106 2 48 254 106 320 3.56e-59 191
Msa0216900 AT4G10340.1 49.524 210 97 4 48 254 62 265 4.38e-53 174
Msa0216900 AT1G61520.3 42.857 217 91 9 61 254 59 265 2.66e-39 138
Msa0216900 AT1G61520.1 42.857 217 91 9 61 254 59 265 2.66e-39 138
Msa0216900 AT1G61520.2 42.029 207 87 9 71 254 14 210 5.75e-35 125
Msa0216900 AT3G61470.1 38.140 215 99 10 51 250 50 245 4.29e-34 124
Msa0216900 AT1G45474.2 40.206 194 101 4 65 250 56 242 3.83e-33 121
Msa0216900 AT1G45474.1 40.206 194 101 4 65 250 56 242 3.83e-33 121
Msa0216900 AT3G08940.2 35.622 233 92 7 62 251 59 276 7.09e-31 116
Msa0216900 AT3G54890.1 40.206 194 96 8 65 254 55 232 1.60e-30 114
Msa0216900 AT1G19150.1 35.111 225 100 8 51 254 63 262 2.64e-28 109
Msa0216900 AT3G47470.1 37.255 204 92 6 64 253 63 244 2.04e-27 106
Msa0216900 AT5G01530.1 34.322 236 97 7 62 254 62 282 2.10e-27 107
Msa0216900 AT1G15820.1 35.096 208 85 7 65 243 70 256 3.66e-21 90.1
Msa0216900 AT2G40100.1 41.447 152 73 5 92 243 136 271 7.61e-21 89.7
Msa0216900 AT3G54890.4 37.975 158 79 7 65 219 55 196 1.57e-19 84.7
Msa0216900 AT5G28450.1 48.718 78 36 2 174 250 87 161 1.52e-14 70.1

Find 108 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGGTGGTCTTGACTATTT+AGG 0.130970 2_1:-63093355 Msa0216900:CDS
CTCAAAAGGGTCTTATAATT+AGG 0.133683 2_1:+63092720 None:intergenic
ATTATGATCTTAATGATTAT+TGG 0.165795 2_1:-63092908 Msa0216900:three_prime_UTR
CTGTTCTTGGCAAATGCTTC+TGG 0.168930 2_1:+63093682 None:intergenic
GGCATAAACCCAGGCATTAT+TGG 0.260488 2_1:+63093018 None:intergenic
AGGACCTTTGGAGAATCTTT+TGG 0.271440 2_1:-63093062 Msa0216900:CDS
GGAGAATTCCCTGGTGATTA+TGG 0.284769 2_1:-63093733 Msa0216900:CDS
TCAAAAGGGTCTTATAATTA+GGG 0.287084 2_1:+63092721 None:intergenic
ACCAGACAGAGTGAAATATT+TGG 0.293839 2_1:-63093791 Msa0216900:CDS
TATTTATATGACTTCCTTGT+TGG 0.307231 2_1:+63092795 None:intergenic
AGGTTTCCAAGTTGTTCTAA+TGG 0.320920 2_1:-63093290 Msa0216900:CDS
CCAGACAGAGTGAAATATTT+GGG 0.332386 2_1:-63093790 Msa0216900:CDS
AACCTCAAGAGCCCTGTTCT+TGG 0.335763 2_1:+63093669 None:intergenic
AAGGTGGTCTTGACTATTTA+GGG 0.341687 2_1:-63093354 Msa0216900:CDS
TTAAGCTCAGCGAAAGTAAC+TGG 0.345168 2_1:+63093163 None:intergenic
CTTTGTGCATGAACAAGGTT+TGG 0.349100 2_1:+63093328 None:intergenic
TTCCGCATCAACGGTCTTCC+TGG 0.355033 2_1:-63093253 Msa0216900:CDS
GGTTTCCAAGTTGTTCTAAT+GGG 0.357946 2_1:-63093289 Msa0216900:CDS
ACCCAGGCATTATTGGCAAC+AGG 0.364495 2_1:+63093025 None:intergenic
CCCAAATATTTCACTCTGTC+TGG 0.371437 2_1:+63093790 None:intergenic
CAGAAGCATTTGCCAAGAAC+AGG 0.372548 2_1:-63093681 Msa0216900:CDS
TGTCACTGGTAAAGGACCTT+TGG 0.380892 2_1:-63093074 Msa0216900:CDS
TTGATTTCAAAGAACCAGTT+TGG 0.381372 2_1:-63093405 Msa0216900:CDS
CAGACTCCTTCATACTTAAC+TGG 0.384985 2_1:-63093754 Msa0216900:CDS
GGCCAATACTTTGACCCTCT+TGG 0.405341 2_1:-63093199 Msa0216900:CDS
GAAGGAGTCTGAGCTGAAAA+TGG 0.411828 2_1:+63093766 None:intergenic
CAAAGCATCTTAGCAGTACT+AGG 0.430115 2_1:-63093310 Msa0216900:CDS
CAAGCTATTGTCACTGGTAA+AGG 0.430252 2_1:-63093082 Msa0216900:CDS
GATCCTGCTTTGAACCAAAC+TGG 0.431531 2_1:+63093391 None:intergenic
TGACTTCCTTGTTGGTTGGT+TGG 0.435541 2_1:+63092803 None:intergenic
GGAAATCAAGAATGGAAGAT+TGG 0.436306 2_1:-63093134 Msa0216900:CDS
TATGCCACCAAGTTTGTGCC+TGG 0.443893 2_1:-63093001 Msa0216900:CDS
GTTAAACAAACTCCTTTCCT+TGG 0.446741 2_1:-63094475 Msa0216900:CDS
TCAGTTATTTGAGTGAACTA+AGG 0.450678 2_1:-63094583 Msa0216900:five_prime_UTR
TGAAGGTGATCCATGGAAGA+TGG 0.451873 2_1:-63093486 Msa0216900:intron
AAAAGAAGCACTTGAAAACT+TGG 0.458356 2_1:-63094547 Msa0216900:five_prime_UTR
ACCCTGTTGCCAATAATGCC+TGG 0.466859 2_1:-63093027 Msa0216900:CDS
TTTGTTCAAGCTATTGTCAC+TGG 0.469594 2_1:-63093088 Msa0216900:CDS
GTTCTAATGGGTCTTGTCGA+AGG 0.474424 2_1:-63093277 Msa0216900:CDS
CCCTGTTGCCAATAATGCCT+GGG 0.476932 2_1:-63093026 Msa0216900:CDS
GGGTCAAAGTATTGGCCACC+AGG 0.488607 2_1:+63093205 None:intergenic
GACCAAGAGGGTCAAAGTAT+TGG 0.490473 2_1:+63093197 None:intergenic
TCCTTTCCTTGGTCAAAGGA+AGG 0.490595 2_1:-63094464 Msa0216900:CDS
TATATGACTTCCTTGTTGGT+TGG 0.496487 2_1:+63092799 None:intergenic
AGTATTGGCCACCAGGGTAA+AGG 0.501836 2_1:+63093212 None:intergenic
TTCTAATGGGTCTTGTCGAA+GGG 0.505605 2_1:-63093276 Msa0216900:CDS
TTTGTGCATGAACAAGGTTT+GGG 0.509110 2_1:+63093329 None:intergenic
CAAGACCCATTAGAACAACT+TGG 0.511234 2_1:+63093284 None:intergenic
AAACTCCTTTCCTTGGTCAA+AGG 0.511273 2_1:-63094468 Msa0216900:CDS
CAGCACCCTTCCTTTGACCA+AGG 0.515079 2_1:+63094458 None:intergenic
TGCCAAGAACAGGGCTCTTG+AGG 0.515098 2_1:-63093671 Msa0216900:intron
TTTCGCTGAGCTTAAAGTGA+AGG 0.516818 2_1:-63093155 Msa0216900:CDS
TTAAGAACCAGGCACAAACT+TGG 0.519988 2_1:+63092994 None:intergenic
CTAGCATAGCCCATCTTCCA+TGG 0.521302 2_1:+63093476 None:intergenic
GTCGAAGGGTTCCGCATCAA+CGG 0.526007 2_1:-63093262 Msa0216900:CDS
TATCTATGATTGCCTTTGTG+TGG 0.526299 2_1:-63092961 Msa0216900:three_prime_UTR
AATTCCCTGGTGATTATGGA+TGG 0.526464 2_1:-63093729 Msa0216900:CDS
GAACCAGTTTGGTTCAAAGC+AGG 0.531298 2_1:-63093394 Msa0216900:CDS
CTTAGAGATGTTGTCGCCAT+GGG 0.532010 2_1:-63094427 Msa0216900:CDS
TACTTAACTGGAGAATTCCC+TGG 0.533200 2_1:-63093742 Msa0216900:CDS
GAAGGTGATCCATGGAAGAT+GGG 0.534211 2_1:-63093485 Msa0216900:intron
ATGGCGACAACATCTCTAAG+AGG 0.535432 2_1:+63094430 None:intergenic
TTGTTGCCCTCTCCGACACC+AGG 0.535866 2_1:+63093235 None:intergenic
GATTATGGATGGGACACTGC+TGG 0.539551 2_1:-63093718 Msa0216900:CDS
AAAGTGAAGGAAATCAAGAA+TGG 0.545234 2_1:-63093142 Msa0216900:CDS
GGTCTTCCTGGTGTCGGAGA+GGG 0.548663 2_1:-63093241 Msa0216900:CDS
AGATGCTTTGTGCATGAACA+AGG 0.550454 2_1:+63093323 None:intergenic
TCTTAGAGATGTTGTCGCCA+TGG 0.551003 2_1:-63094428 Msa0216900:CDS
CATGGAAGATGGGCTATGCT+AGG 0.554415 2_1:-63093475 Msa0216900:CDS
AACATTGATGTTTAAGAACC+AGG 0.556979 2_1:+63092983 None:intergenic
AATTCTCCAGTTAAGTATGA+AGG 0.558241 2_1:+63093748 None:intergenic
GTGTCCCATCCATAATCACC+AGG 0.560079 2_1:+63093724 None:intergenic
CCTTTCCTTGGTCAAAGGAA+GGG 0.568157 2_1:-63094463 Msa0216900:CDS
TGGGCTATGCTAGGAGCACT+CGG 0.571623 2_1:-63093466 Msa0216900:CDS
GACAACATCTCTAAGAGGGT+TGG 0.572370 2_1:+63094435 None:intergenic
CGGTCTTCCTGGTGTCGGAG+AGG 0.575168 2_1:-63093242 Msa0216900:CDS
ATCAACGGTCTTCCTGGTGT+CGG 0.580505 2_1:-63093247 Msa0216900:CDS
AGCGAAAGTAACTGGATCGT+CGG 0.584697 2_1:+63093171 None:intergenic
CCCAGGCATTATTGGCAACA+GGG 0.587322 2_1:+63093026 None:intergenic
GGTGAATCTTGAGGTTCCCA+TGG 0.597497 2_1:+63094411 None:intergenic
AAATACCATGGTGAATCTTG+AGG 0.601532 2_1:+63094402 None:intergenic
AAGGGAAATGAATTGTGGTA+TGG 0.602138 2_1:-63093814 Msa0216900:CDS
TGTAGCAGCCATCAATGCCA+TGG 0.603074 2_1:+63094516 None:intergenic
AGAACCAGGCACAAACTTGG+TGG 0.606113 2_1:+63092997 None:intergenic
AGGTAGTAGTATTTATGCAA+TGG 0.609567 2_1:+63092748 None:intergenic
CCCTTCCTTTGACCAAGGAA+AGG 0.609595 2_1:+63094463 None:intergenic
GGATCGCAAATCTTCTCAGA+AGG 0.611974 2_1:-63093373 Msa0216900:CDS
CACCAGGAAGACCGTTGATG+CGG 0.612040 2_1:+63093251 None:intergenic
TCGCAAATCTTCTCAGAAGG+TGG 0.619983 2_1:-63093370 Msa0216900:CDS
ATTCCCTGGTGATTATGGAT+GGG 0.621810 2_1:-63093728 Msa0216900:CDS
AGAAGCATTTGCCAAGAACA+GGG 0.625251 2_1:-63093680 Msa0216900:CDS
TGGCGACAACATCTCTAAGA+GGG 0.635101 2_1:+63094431 None:intergenic
TTGTGAAGGGAAATGAATTG+TGG 0.635151 2_1:-63093819 Msa0216900:intron
TTTAAACCAACCAACCAACA+AGG 0.640572 2_1:-63092809 Msa0216900:three_prime_UTR
GGATCGTCGGCTAGACCAAG+AGG 0.652317 2_1:+63093184 None:intergenic
GGTCAAAGTATTGGCCACCA+GGG 0.653321 2_1:+63093206 None:intergenic
TGATCCAAAAGATTCTCCAA+AGG 0.654984 2_1:+63093058 None:intergenic
AAACTTGGTGGCATAAACCC+AGG 0.664430 2_1:+63093009 None:intergenic
GGTCTTATAATTAGGGACTG+AGG 0.666737 2_1:+63092728 None:intergenic
TCTAATCATCATCCACACAA+AGG 0.671776 2_1:+63092949 None:intergenic
GAGGGCAACAACCTTTACCC+TGG 0.674842 2_1:-63093223 Msa0216900:CDS
GATCGTCGGCTAGACCAAGA+GGG 0.686043 2_1:+63093185 None:intergenic
GGCAACAACCTTTACCCTGG+TGG 0.691666 2_1:-63093220 Msa0216900:CDS
TAACTGATACTAGAAATGTG+TGG 0.703886 2_1:+63094599 None:intergenic
GTGTGGATGATGATTAGACA+TGG 0.706158 2_1:-63092944 Msa0216900:three_prime_UTR
GGGAACCTCAAGATTCACCA+TGG 0.716738 2_1:-63094407 Msa0216900:intron
CAGACAGAGTGAAATATTTG+GGG 0.720681 2_1:-63093789 Msa0216900:CDS
TGTCCCATCCATAATCACCA+GGG 0.728458 2_1:+63093725 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTATACTAAAAGAAAAA+GGG + chr2_1:63092940-63092959 None:intergenic 10.0%
!! AAATTTATACTAAAAGAAAA+AGG + chr2_1:63092941-63092960 None:intergenic 10.0%
!! AATTTATACTAAAAGAAAAA+GGG + chr2_1:63092940-63092959 None:intergenic 10.0%
!! AAATTTATACTAAAAGAAAA+AGG + chr2_1:63092941-63092960 None:intergenic 10.0%
!! TTTAGAAAAAAACATAAGAA+TGG + chr2_1:63093711-63093730 None:intergenic 15.0%
!! ACATAACTTAATATCTTTAT+CGG + chr2_1:63093795-63093814 None:intergenic 15.0%
!! ATTATGATCTTAATGATTAT+TGG - chr2_1:63094400-63094419 Msa0216900:intron 15.0%
!! TTTAGAAAAAAACATAAGAA+TGG + chr2_1:63093711-63093730 None:intergenic 15.0%
!! ACATAACTTAATATCTTTAT+CGG + chr2_1:63093795-63093814 None:intergenic 15.0%
!! ATTATGATCTTAATGATTAT+TGG - chr2_1:63094400-63094419 Msa0216900:intron 15.0%
!!! CAAGTATGTTTTTTTATCAT+TGG - chr2_1:63093121-63093140 Msa0216900:CDS 20.0%
!!! ACGTTTAGATATGTTTTTAT+TGG - chr2_1:63093366-63093385 Msa0216900:CDS 20.0%
!!! TAGAACGTTAACAAAATTTT+TGG + chr2_1:63093745-63093764 None:intergenic 20.0%
!!! TAAGTTATGTTGAATTTTGA+AGG - chr2_1:63093805-63093824 Msa0216900:CDS 20.0%
!!! ACTAATGTTCATTTTAAAGA+TGG - chr2_1:63094452-63094471 Msa0216900:CDS 20.0%
!!! CAAGTATGTTTTTTTATCAT+TGG - chr2_1:63093121-63093140 Msa0216900:CDS 20.0%
!!! ACGTTTAGATATGTTTTTAT+TGG - chr2_1:63093366-63093385 Msa0216900:CDS 20.0%
!!! TAGAACGTTAACAAAATTTT+TGG + chr2_1:63093745-63093764 None:intergenic 20.0%
!!! TAAGTTATGTTGAATTTTGA+AGG - chr2_1:63093805-63093824 Msa0216900:CDS 20.0%
!!! ACTAATGTTCATTTTAAAGA+TGG - chr2_1:63094452-63094471 Msa0216900:CDS 20.0%
! CACTATGCTAACATATTTAT+AGG - chr2_1:63092961-63092980 Msa0216900:three_prime_UTR 25.0%
! TAAAAAAACATACTTGTGCA+TGG + chr2_1:63093117-63093136 None:intergenic 25.0%
! CTAACAAAGTATATGCTTTA+TGG + chr2_1:63093252-63093271 None:intergenic 25.0%
!!! TTTATATAGTGTTGCTTATG+TGG - chr2_1:63093442-63093461 Msa0216900:CDS 25.0%
!!! TGGATTAGTATATCTGTTTT+TGG - chr2_1:63094420-63094439 Msa0216900:CDS 25.0%
!!! ATATCTGTTTTTGGTTCTTA+AGG - chr2_1:63094429-63094448 Msa0216900:CDS 25.0%
! TATTTATATGACTTCCTTGT+TGG + chr2_1:63094516-63094535 None:intergenic 25.0%
!! TCAAAAGGGTCTTATAATTA+GGG + chr2_1:63094590-63094609 None:intergenic 25.0%
! CACTATGCTAACATATTTAT+AGG - chr2_1:63092961-63092980 Msa0216900:three_prime_UTR 25.0%
! TAAAAAAACATACTTGTGCA+TGG + chr2_1:63093117-63093136 None:intergenic 25.0%
! CTAACAAAGTATATGCTTTA+TGG + chr2_1:63093252-63093271 None:intergenic 25.0%
!!! TTTATATAGTGTTGCTTATG+TGG - chr2_1:63093442-63093461 Msa0216900:CDS 25.0%
!!! TGGATTAGTATATCTGTTTT+TGG - chr2_1:63094420-63094439 Msa0216900:CDS 25.0%
!!! ATATCTGTTTTTGGTTCTTA+AGG - chr2_1:63094429-63094448 Msa0216900:CDS 25.0%
! TATTTATATGACTTCCTTGT+TGG + chr2_1:63094516-63094535 None:intergenic 25.0%
!! TCAAAAGGGTCTTATAATTA+GGG + chr2_1:63094590-63094609 None:intergenic 25.0%
TCAGTTATTTGAGTGAACTA+AGG - chr2_1:63092725-63092744 Msa0216900:three_prime_UTR 30.0%
!! AAAAGAAGCACTTGAAAACT+TGG - chr2_1:63092761-63092780 Msa0216900:three_prime_UTR 30.0%
AAAACTTGGAACAAAAACCA+TGG - chr2_1:63092775-63092794 Msa0216900:three_prime_UTR 30.0%
CTAAAAGAAAAAGGGAAAAG+AGG + chr2_1:63092932-63092951 None:intergenic 30.0%
TTTGTTTCGCACCATATAAT+TGG - chr2_1:63093226-63093245 Msa0216900:CDS 30.0%
ATGCTTTATGGCCAATTATA+TGG + chr2_1:63093240-63093259 None:intergenic 30.0%
TAACTAATGATAGACACGTT+CGG - chr2_1:63093322-63093341 Msa0216900:CDS 30.0%
ATTGTGTTTGTGATTGTGAA+GGG - chr2_1:63093476-63093495 Msa0216900:CDS 30.0%
AATTCTCCAGTTAAGTATGA+AGG + chr2_1:63093563-63093582 None:intergenic 30.0%
TTAAAAATGCTCCAAAACCA+TGG - chr2_1:63093673-63093692 Msa0216900:CDS 30.0%
! ATGAGAAAAAACCATGGTTT+TGG + chr2_1:63093687-63093706 None:intergenic 30.0%
AATGGAATGAGAAAAAACCA+TGG + chr2_1:63093693-63093712 None:intergenic 30.0%
! ACCTGAAGTACTTGAAAAAT+GGG - chr2_1:63093874-63093893 Msa0216900:intron 30.0%
TTGATTTCAAAGAACCAGTT+TGG - chr2_1:63093903-63093922 Msa0216900:intron 30.0%
AAAGTGAAGGAAATCAAGAA+TGG - chr2_1:63094166-63094185 Msa0216900:intron 30.0%
AACATTGATGTTTAAGAACC+AGG + chr2_1:63094328-63094347 None:intergenic 30.0%
AGGTAGTAGTATTTATGCAA+TGG + chr2_1:63094563-63094582 None:intergenic 30.0%
! CTCAAAAGGGTCTTATAATT+AGG + chr2_1:63094591-63094610 None:intergenic 30.0%
TCAGTTATTTGAGTGAACTA+AGG - chr2_1:63092725-63092744 Msa0216900:three_prime_UTR 30.0%
!! AAAAGAAGCACTTGAAAACT+TGG - chr2_1:63092761-63092780 Msa0216900:three_prime_UTR 30.0%
AAAACTTGGAACAAAAACCA+TGG - chr2_1:63092775-63092794 Msa0216900:three_prime_UTR 30.0%
CTAAAAGAAAAAGGGAAAAG+AGG + chr2_1:63092932-63092951 None:intergenic 30.0%
TTTGTTTCGCACCATATAAT+TGG - chr2_1:63093226-63093245 Msa0216900:CDS 30.0%
ATGCTTTATGGCCAATTATA+TGG + chr2_1:63093240-63093259 None:intergenic 30.0%
TAACTAATGATAGACACGTT+CGG - chr2_1:63093322-63093341 Msa0216900:CDS 30.0%
ATTGTGTTTGTGATTGTGAA+GGG - chr2_1:63093476-63093495 Msa0216900:CDS 30.0%
AATTCTCCAGTTAAGTATGA+AGG + chr2_1:63093563-63093582 None:intergenic 30.0%
TTAAAAATGCTCCAAAACCA+TGG - chr2_1:63093673-63093692 Msa0216900:CDS 30.0%
! ATGAGAAAAAACCATGGTTT+TGG + chr2_1:63093687-63093706 None:intergenic 30.0%
AATGGAATGAGAAAAAACCA+TGG + chr2_1:63093693-63093712 None:intergenic 30.0%
! ACCTGAAGTACTTGAAAAAT+GGG - chr2_1:63093874-63093893 Msa0216900:intron 30.0%
TTGATTTCAAAGAACCAGTT+TGG - chr2_1:63093903-63093922 Msa0216900:intron 30.0%
AAAGTGAAGGAAATCAAGAA+TGG - chr2_1:63094166-63094185 Msa0216900:intron 30.0%
AACATTGATGTTTAAGAACC+AGG + chr2_1:63094328-63094347 None:intergenic 30.0%
AGGTAGTAGTATTTATGCAA+TGG + chr2_1:63094563-63094582 None:intergenic 30.0%
! CTCAAAAGGGTCTTATAATT+AGG + chr2_1:63094591-63094610 None:intergenic 30.0%
! AACAAAAACCATGGCATTGA+TGG - chr2_1:63092784-63092803 Msa0216900:three_prime_UTR 35.0%
GTTAAACAAACTCCTTTCCT+TGG - chr2_1:63092833-63092852 Msa0216900:three_prime_UTR 35.0%
AAATACCATGGTGAATCTTG+AGG + chr2_1:63092909-63092928 None:intergenic 35.0%
TTAGTAGCATCACACGTTTA+AGG + chr2_1:63093006-63093025 None:intergenic 35.0%
AAACGTGTGATGCTACTAAT+TGG - chr2_1:63093007-63093026 Msa0216900:CDS 35.0%
AACTAATGATAGACACGTTC+GGG - chr2_1:63093323-63093342 Msa0216900:CDS 35.0%
CATTGTGTTTGTGATTGTGA+AGG - chr2_1:63093475-63093494 Msa0216900:CDS 35.0%
TTGTGAAGGGAAATGAATTG+TGG - chr2_1:63093489-63093508 Msa0216900:intron 35.0%
AAGGGAAATGAATTGTGGTA+TGG - chr2_1:63093494-63093513 Msa0216900:intron 35.0%
ACCAGACAGAGTGAAATATT+TGG - chr2_1:63093517-63093536 Msa0216900:intron 35.0%
CCAGACAGAGTGAAATATTT+GGG - chr2_1:63093518-63093537 Msa0216900:intron 35.0%
CAGACAGAGTGAAATATTTG+GGG - chr2_1:63093519-63093538 Msa0216900:intron 35.0%
!! TGAATTTTGAAGGTGATCCA+TGG - chr2_1:63093815-63093834 Msa0216900:intron 35.0%
! CACCTGAAGTACTTGAAAAA+TGG - chr2_1:63093873-63093892 Msa0216900:intron 35.0%
!!! ACCCATTTTTCAAGTACTTC+AGG + chr2_1:63093878-63093897 None:intergenic 35.0%
! AAGGTGGTCTTGACTATTTA+GGG - chr2_1:63093954-63093973 Msa0216900:intron 35.0%
TTTGTGCATGAACAAGGTTT+GGG + chr2_1:63093982-63094001 None:intergenic 35.0%
AGGTTTCCAAGTTGTTCTAA+TGG - chr2_1:63094018-63094037 Msa0216900:intron 35.0%
GGTTTCCAAGTTGTTCTAAT+GGG - chr2_1:63094019-63094038 Msa0216900:intron 35.0%
GGAAATCAAGAATGGAAGAT+TGG - chr2_1:63094174-63094193 Msa0216900:intron 35.0%
! TTGGCTATGTTTTCGATGTT+TGG - chr2_1:63094193-63094212 Msa0216900:intron 35.0%
TTTGTTCAAGCTATTGTCAC+TGG - chr2_1:63094220-63094239 Msa0216900:intron 35.0%
TGATCCAAAAGATTCTCCAA+AGG + chr2_1:63094253-63094272 None:intergenic 35.0%
TATCTATGATTGCCTTTGTG+TGG - chr2_1:63094347-63094366 Msa0216900:intron 35.0%
TCTAATCATCATCCACACAA+AGG + chr2_1:63094362-63094381 None:intergenic 35.0%
TTTAAACCAACCAACCAACA+AGG - chr2_1:63094499-63094518 Msa0216900:CDS 35.0%
TATATGACTTCCTTGTTGGT+TGG + chr2_1:63094512-63094531 None:intergenic 35.0%
! AACAAAAACCATGGCATTGA+TGG - chr2_1:63092784-63092803 Msa0216900:three_prime_UTR 35.0%
GTTAAACAAACTCCTTTCCT+TGG - chr2_1:63092833-63092852 Msa0216900:three_prime_UTR 35.0%
AAATACCATGGTGAATCTTG+AGG + chr2_1:63092909-63092928 None:intergenic 35.0%
TTAGTAGCATCACACGTTTA+AGG + chr2_1:63093006-63093025 None:intergenic 35.0%
AAACGTGTGATGCTACTAAT+TGG - chr2_1:63093007-63093026 Msa0216900:CDS 35.0%
AACTAATGATAGACACGTTC+GGG - chr2_1:63093323-63093342 Msa0216900:CDS 35.0%
CATTGTGTTTGTGATTGTGA+AGG - chr2_1:63093475-63093494 Msa0216900:CDS 35.0%
TTGTGAAGGGAAATGAATTG+TGG - chr2_1:63093489-63093508 Msa0216900:intron 35.0%
AAGGGAAATGAATTGTGGTA+TGG - chr2_1:63093494-63093513 Msa0216900:intron 35.0%
ACCAGACAGAGTGAAATATT+TGG - chr2_1:63093517-63093536 Msa0216900:intron 35.0%
CCAGACAGAGTGAAATATTT+GGG - chr2_1:63093518-63093537 Msa0216900:intron 35.0%
CAGACAGAGTGAAATATTTG+GGG - chr2_1:63093519-63093538 Msa0216900:intron 35.0%
!! TGAATTTTGAAGGTGATCCA+TGG - chr2_1:63093815-63093834 Msa0216900:intron 35.0%
! CACCTGAAGTACTTGAAAAA+TGG - chr2_1:63093873-63093892 Msa0216900:intron 35.0%
!!! ACCCATTTTTCAAGTACTTC+AGG + chr2_1:63093878-63093897 None:intergenic 35.0%
! AAGGTGGTCTTGACTATTTA+GGG - chr2_1:63093954-63093973 Msa0216900:intron 35.0%
TTTGTGCATGAACAAGGTTT+GGG + chr2_1:63093982-63094001 None:intergenic 35.0%
AGGTTTCCAAGTTGTTCTAA+TGG - chr2_1:63094018-63094037 Msa0216900:intron 35.0%
GGTTTCCAAGTTGTTCTAAT+GGG - chr2_1:63094019-63094038 Msa0216900:intron 35.0%
GGAAATCAAGAATGGAAGAT+TGG - chr2_1:63094174-63094193 Msa0216900:intron 35.0%
! TTGGCTATGTTTTCGATGTT+TGG - chr2_1:63094193-63094212 Msa0216900:intron 35.0%
TTTGTTCAAGCTATTGTCAC+TGG - chr2_1:63094220-63094239 Msa0216900:intron 35.0%
TGATCCAAAAGATTCTCCAA+AGG + chr2_1:63094253-63094272 None:intergenic 35.0%
TATCTATGATTGCCTTTGTG+TGG - chr2_1:63094347-63094366 Msa0216900:intron 35.0%
TCTAATCATCATCCACACAA+AGG + chr2_1:63094362-63094381 None:intergenic 35.0%
TTTAAACCAACCAACCAACA+AGG - chr2_1:63094499-63094518 Msa0216900:CDS 35.0%
TATATGACTTCCTTGTTGGT+TGG + chr2_1:63094512-63094531 None:intergenic 35.0%
AAACTCCTTTCCTTGGTCAA+AGG - chr2_1:63092840-63092859 Msa0216900:three_prime_UTR 40.0%
AGGGAAAAGAGGAAATACCA+TGG + chr2_1:63092921-63092940 None:intergenic 40.0%
CCCAAATATTTCACTCTGTC+TGG + chr2_1:63093521-63093540 None:intergenic 40.0%
CAGACTCCTTCATACTTAAC+TGG - chr2_1:63093554-63093573 Msa0216900:intron 40.0%
TACTTAACTGGAGAATTCCC+TGG - chr2_1:63093566-63093585 Msa0216900:intron 40.0%
AATTCCCTGGTGATTATGGA+TGG - chr2_1:63093579-63093598 Msa0216900:intron 40.0%
ATTCCCTGGTGATTATGGAT+GGG - chr2_1:63093580-63093599 Msa0216900:intron 40.0%
!! AGAAGCATTTGCCAAGAACA+GGG - chr2_1:63093628-63093647 Msa0216900:intron 40.0%
! GAAGGTGGTCTTGACTATTT+AGG - chr2_1:63093953-63093972 Msa0216900:intron 40.0%
CTTTGTGCATGAACAAGGTT+TGG + chr2_1:63093983-63094002 None:intergenic 40.0%
AGATGCTTTGTGCATGAACA+AGG + chr2_1:63093988-63094007 None:intergenic 40.0%
! CAAAGCATCTTAGCAGTACT+AGG - chr2_1:63093998-63094017 Msa0216900:intron 40.0%
CAAGACCCATTAGAACAACT+TGG + chr2_1:63094027-63094046 None:intergenic 40.0%
! TTCTAATGGGTCTTGTCGAA+GGG - chr2_1:63094032-63094051 Msa0216900:intron 40.0%
TTAAGCTCAGCGAAAGTAAC+TGG + chr2_1:63094148-63094167 None:intergenic 40.0%
TTTCGCTGAGCTTAAAGTGA+AGG - chr2_1:63094153-63094172 Msa0216900:intron 40.0%
CAAGCTATTGTCACTGGTAA+AGG - chr2_1:63094226-63094245 Msa0216900:intron 40.0%
!! AGGACCTTTGGAGAATCTTT+TGG - chr2_1:63094246-63094265 Msa0216900:intron 40.0%
TTAAGAACCAGGCACAAACT+TGG + chr2_1:63094317-63094336 None:intergenic 40.0%
GTGTGGATGATGATTAGACA+TGG - chr2_1:63094364-63094383 Msa0216900:intron 40.0%
! GGTCTTATAATTAGGGACTG+AGG + chr2_1:63094583-63094602 None:intergenic 40.0%
AAACTCCTTTCCTTGGTCAA+AGG - chr2_1:63092840-63092859 Msa0216900:three_prime_UTR 40.0%
AGGGAAAAGAGGAAATACCA+TGG + chr2_1:63092921-63092940 None:intergenic 40.0%
CCCAAATATTTCACTCTGTC+TGG + chr2_1:63093521-63093540 None:intergenic 40.0%
CAGACTCCTTCATACTTAAC+TGG - chr2_1:63093554-63093573 Msa0216900:intron 40.0%
TACTTAACTGGAGAATTCCC+TGG - chr2_1:63093566-63093585 Msa0216900:intron 40.0%
AATTCCCTGGTGATTATGGA+TGG - chr2_1:63093579-63093598 Msa0216900:intron 40.0%
ATTCCCTGGTGATTATGGAT+GGG - chr2_1:63093580-63093599 Msa0216900:intron 40.0%
!! AGAAGCATTTGCCAAGAACA+GGG - chr2_1:63093628-63093647 Msa0216900:intron 40.0%
! GAAGGTGGTCTTGACTATTT+AGG - chr2_1:63093953-63093972 Msa0216900:intron 40.0%
CTTTGTGCATGAACAAGGTT+TGG + chr2_1:63093983-63094002 None:intergenic 40.0%
AGATGCTTTGTGCATGAACA+AGG + chr2_1:63093988-63094007 None:intergenic 40.0%
! CAAAGCATCTTAGCAGTACT+AGG - chr2_1:63093998-63094017 Msa0216900:intron 40.0%
CAAGACCCATTAGAACAACT+TGG + chr2_1:63094027-63094046 None:intergenic 40.0%
! TTCTAATGGGTCTTGTCGAA+GGG - chr2_1:63094032-63094051 Msa0216900:intron 40.0%
TTAAGCTCAGCGAAAGTAAC+TGG + chr2_1:63094148-63094167 None:intergenic 40.0%
TTTCGCTGAGCTTAAAGTGA+AGG - chr2_1:63094153-63094172 Msa0216900:intron 40.0%
CAAGCTATTGTCACTGGTAA+AGG - chr2_1:63094226-63094245 Msa0216900:intron 40.0%
!! AGGACCTTTGGAGAATCTTT+TGG - chr2_1:63094246-63094265 Msa0216900:intron 40.0%
TTAAGAACCAGGCACAAACT+TGG + chr2_1:63094317-63094336 None:intergenic 40.0%
GTGTGGATGATGATTAGACA+TGG - chr2_1:63094364-63094383 Msa0216900:intron 40.0%
! GGTCTTATAATTAGGGACTG+AGG + chr2_1:63094583-63094602 None:intergenic 40.0%
TCCTTTCCTTGGTCAAAGGA+AGG - chr2_1:63092844-63092863 Msa0216900:three_prime_UTR 45.0%
CCTTTCCTTGGTCAAAGGAA+GGG - chr2_1:63092845-63092864 Msa0216900:three_prime_UTR 45.0%
! GACAACATCTCTAAGAGGGT+TGG + chr2_1:63092876-63092895 None:intergenic 45.0%
! TGGCGACAACATCTCTAAGA+GGG + chr2_1:63092880-63092899 None:intergenic 45.0%
ATGGCGACAACATCTCTAAG+AGG + chr2_1:63092881-63092900 None:intergenic 45.0%
TCTTAGAGATGTTGTCGCCA+TGG - chr2_1:63092880-63092899 Msa0216900:three_prime_UTR 45.0%
CTTAGAGATGTTGTCGCCAT+GGG - chr2_1:63092881-63092900 Msa0216900:three_prime_UTR 45.0%
GAAGGAGTCTGAGCTGAAAA+TGG + chr2_1:63093545-63093564 None:intergenic 45.0%
GGAGAATTCCCTGGTGATTA+TGG - chr2_1:63093575-63093594 Msa0216900:intron 45.0%
TGTCCCATCCATAATCACCA+GGG + chr2_1:63093586-63093605 None:intergenic 45.0%
CTGTTCTTGGCAAATGCTTC+TGG + chr2_1:63093629-63093648 None:intergenic 45.0%
!! CAGAAGCATTTGCCAAGAAC+AGG - chr2_1:63093627-63093646 Msa0216900:intron 45.0%
TGAAGGTGATCCATGGAAGA+TGG - chr2_1:63093822-63093841 Msa0216900:intron 45.0%
GAAGGTGATCCATGGAAGAT+GGG - chr2_1:63093823-63093842 Msa0216900:intron 45.0%
! GAACCAGTTTGGTTCAAAGC+AGG - chr2_1:63093914-63093933 Msa0216900:intron 45.0%
! GATCCTGCTTTGAACCAAAC+TGG + chr2_1:63093920-63093939 None:intergenic 45.0%
GGATCGCAAATCTTCTCAGA+AGG - chr2_1:63093935-63093954 Msa0216900:intron 45.0%
TCGCAAATCTTCTCAGAAGG+TGG - chr2_1:63093938-63093957 Msa0216900:intron 45.0%
! GTTCTAATGGGTCTTGTCGA+AGG - chr2_1:63094031-63094050 Msa0216900:intron 45.0%
GACCAAGAGGGTCAAAGTAT+TGG + chr2_1:63094114-63094133 None:intergenic 45.0%
AGCGAAAGTAACTGGATCGT+CGG + chr2_1:63094140-63094159 None:intergenic 45.0%
TGTCACTGGTAAAGGACCTT+TGG - chr2_1:63094234-63094253 Msa0216900:intron 45.0%
GGCATAAACCCAGGCATTAT+TGG + chr2_1:63094293-63094312 None:intergenic 45.0%
! AAACTTGGTGGCATAAACCC+AGG + chr2_1:63094302-63094321 None:intergenic 45.0%
! TGACTTCCTTGTTGGTTGGT+TGG + chr2_1:63094508-63094527 None:intergenic 45.0%
TCCTTTCCTTGGTCAAAGGA+AGG - chr2_1:63092844-63092863 Msa0216900:three_prime_UTR 45.0%
CCTTTCCTTGGTCAAAGGAA+GGG - chr2_1:63092845-63092864 Msa0216900:three_prime_UTR 45.0%
! GACAACATCTCTAAGAGGGT+TGG + chr2_1:63092876-63092895 None:intergenic 45.0%
! TGGCGACAACATCTCTAAGA+GGG + chr2_1:63092880-63092899 None:intergenic 45.0%
ATGGCGACAACATCTCTAAG+AGG + chr2_1:63092881-63092900 None:intergenic 45.0%
TCTTAGAGATGTTGTCGCCA+TGG - chr2_1:63092880-63092899 Msa0216900:three_prime_UTR 45.0%
CTTAGAGATGTTGTCGCCAT+GGG - chr2_1:63092881-63092900 Msa0216900:three_prime_UTR 45.0%
GAAGGAGTCTGAGCTGAAAA+TGG + chr2_1:63093545-63093564 None:intergenic 45.0%
GGAGAATTCCCTGGTGATTA+TGG - chr2_1:63093575-63093594 Msa0216900:intron 45.0%
TGTCCCATCCATAATCACCA+GGG + chr2_1:63093586-63093605 None:intergenic 45.0%
CTGTTCTTGGCAAATGCTTC+TGG + chr2_1:63093629-63093648 None:intergenic 45.0%
!! CAGAAGCATTTGCCAAGAAC+AGG - chr2_1:63093627-63093646 Msa0216900:intron 45.0%
TGAAGGTGATCCATGGAAGA+TGG - chr2_1:63093822-63093841 Msa0216900:intron 45.0%
GAAGGTGATCCATGGAAGAT+GGG - chr2_1:63093823-63093842 Msa0216900:intron 45.0%
! GAACCAGTTTGGTTCAAAGC+AGG - chr2_1:63093914-63093933 Msa0216900:intron 45.0%
! GATCCTGCTTTGAACCAAAC+TGG + chr2_1:63093920-63093939 None:intergenic 45.0%
GGATCGCAAATCTTCTCAGA+AGG - chr2_1:63093935-63093954 Msa0216900:intron 45.0%
TCGCAAATCTTCTCAGAAGG+TGG - chr2_1:63093938-63093957 Msa0216900:intron 45.0%
! GTTCTAATGGGTCTTGTCGA+AGG - chr2_1:63094031-63094050 Msa0216900:intron 45.0%
GACCAAGAGGGTCAAAGTAT+TGG + chr2_1:63094114-63094133 None:intergenic 45.0%
AGCGAAAGTAACTGGATCGT+CGG + chr2_1:63094140-63094159 None:intergenic 45.0%
TGTCACTGGTAAAGGACCTT+TGG - chr2_1:63094234-63094253 Msa0216900:intron 45.0%
GGCATAAACCCAGGCATTAT+TGG + chr2_1:63094293-63094312 None:intergenic 45.0%
! AAACTTGGTGGCATAAACCC+AGG + chr2_1:63094302-63094321 None:intergenic 45.0%
! TGACTTCCTTGTTGGTTGGT+TGG + chr2_1:63094508-63094527 None:intergenic 45.0%
TGTAGCAGCCATCAATGCCA+TGG + chr2_1:63092795-63092814 None:intergenic 50.0%
CCCTTCCTTTGACCAAGGAA+AGG + chr2_1:63092848-63092867 None:intergenic 50.0%
GGTGAATCTTGAGGTTCCCA+TGG + chr2_1:63092900-63092919 None:intergenic 50.0%
GGGAACCTCAAGATTCACCA+TGG - chr2_1:63092901-63092920 Msa0216900:three_prime_UTR 50.0%
GTGTCCCATCCATAATCACC+AGG + chr2_1:63093587-63093606 None:intergenic 50.0%
GATTATGGATGGGACACTGC+TGG - chr2_1:63093590-63093609 Msa0216900:intron 50.0%
AACCTCAAGAGCCCTGTTCT+TGG + chr2_1:63093642-63093661 None:intergenic 50.0%
CTAGCATAGCCCATCTTCCA+TGG + chr2_1:63093835-63093854 None:intergenic 50.0%
!! CATGGAAGATGGGCTATGCT+AGG - chr2_1:63093833-63093852 Msa0216900:intron 50.0%
ATCAACGGTCTTCCTGGTGT+CGG - chr2_1:63094061-63094080 Msa0216900:intron 50.0%
!! AGTATTGGCCACCAGGGTAA+AGG + chr2_1:63094099-63094118 None:intergenic 50.0%
!! GGTCAAAGTATTGGCCACCA+GGG + chr2_1:63094105-63094124 None:intergenic 50.0%
GGCCAATACTTTGACCCTCT+TGG - chr2_1:63094109-63094128 Msa0216900:intron 50.0%
ACCCTGTTGCCAATAATGCC+TGG - chr2_1:63094281-63094300 Msa0216900:intron 50.0%
CCCAGGCATTATTGGCAACA+GGG + chr2_1:63094285-63094304 None:intergenic 50.0%
CCCTGTTGCCAATAATGCCT+GGG - chr2_1:63094282-63094301 Msa0216900:intron 50.0%
ACCCAGGCATTATTGGCAAC+AGG + chr2_1:63094286-63094305 None:intergenic 50.0%
TATGCCACCAAGTTTGTGCC+TGG - chr2_1:63094307-63094326 Msa0216900:intron 50.0%
AGAACCAGGCACAAACTTGG+TGG + chr2_1:63094314-63094333 None:intergenic 50.0%
TGTAGCAGCCATCAATGCCA+TGG + chr2_1:63092795-63092814 None:intergenic 50.0%
CCCTTCCTTTGACCAAGGAA+AGG + chr2_1:63092848-63092867 None:intergenic 50.0%
GGTGAATCTTGAGGTTCCCA+TGG + chr2_1:63092900-63092919 None:intergenic 50.0%
GGGAACCTCAAGATTCACCA+TGG - chr2_1:63092901-63092920 Msa0216900:three_prime_UTR 50.0%
GTGTCCCATCCATAATCACC+AGG + chr2_1:63093587-63093606 None:intergenic 50.0%
GATTATGGATGGGACACTGC+TGG - chr2_1:63093590-63093609 Msa0216900:intron 50.0%
AACCTCAAGAGCCCTGTTCT+TGG + chr2_1:63093642-63093661 None:intergenic 50.0%
CTAGCATAGCCCATCTTCCA+TGG + chr2_1:63093835-63093854 None:intergenic 50.0%
!! CATGGAAGATGGGCTATGCT+AGG - chr2_1:63093833-63093852 Msa0216900:intron 50.0%
ATCAACGGTCTTCCTGGTGT+CGG - chr2_1:63094061-63094080 Msa0216900:intron 50.0%
!! AGTATTGGCCACCAGGGTAA+AGG + chr2_1:63094099-63094118 None:intergenic 50.0%
!! GGTCAAAGTATTGGCCACCA+GGG + chr2_1:63094105-63094124 None:intergenic 50.0%
GGCCAATACTTTGACCCTCT+TGG - chr2_1:63094109-63094128 Msa0216900:intron 50.0%
ACCCTGTTGCCAATAATGCC+TGG - chr2_1:63094281-63094300 Msa0216900:intron 50.0%
CCCAGGCATTATTGGCAACA+GGG + chr2_1:63094285-63094304 None:intergenic 50.0%
CCCTGTTGCCAATAATGCCT+GGG - chr2_1:63094282-63094301 Msa0216900:intron 50.0%
ACCCAGGCATTATTGGCAAC+AGG + chr2_1:63094286-63094305 None:intergenic 50.0%
TATGCCACCAAGTTTGTGCC+TGG - chr2_1:63094307-63094326 Msa0216900:intron 50.0%
AGAACCAGGCACAAACTTGG+TGG + chr2_1:63094314-63094333 None:intergenic 50.0%
CAGCACCCTTCCTTTGACCA+AGG + chr2_1:63092853-63092872 None:intergenic 55.0%
TGCCAAGAACAGGGCTCTTG+AGG - chr2_1:63093637-63093656 Msa0216900:intron 55.0%
!! TGGGCTATGCTAGGAGCACT+CGG - chr2_1:63093842-63093861 Msa0216900:intron 55.0%
GTCGAAGGGTTCCGCATCAA+CGG - chr2_1:63094046-63094065 Msa0216900:intron 55.0%
TTCCGCATCAACGGTCTTCC+TGG - chr2_1:63094055-63094074 Msa0216900:intron 55.0%
CACCAGGAAGACCGTTGATG+CGG + chr2_1:63094060-63094079 None:intergenic 55.0%
GAGGGCAACAACCTTTACCC+TGG - chr2_1:63094085-63094104 Msa0216900:intron 55.0%
GGCAACAACCTTTACCCTGG+TGG - chr2_1:63094088-63094107 Msa0216900:intron 55.0%
!! GGGTCAAAGTATTGGCCACC+AGG + chr2_1:63094106-63094125 None:intergenic 55.0%
! GATCGTCGGCTAGACCAAGA+GGG + chr2_1:63094126-63094145 None:intergenic 55.0%
CAGCACCCTTCCTTTGACCA+AGG + chr2_1:63092853-63092872 None:intergenic 55.0%
TGCCAAGAACAGGGCTCTTG+AGG - chr2_1:63093637-63093656 Msa0216900:intron 55.0%
!! TGGGCTATGCTAGGAGCACT+CGG - chr2_1:63093842-63093861 Msa0216900:intron 55.0%
GTCGAAGGGTTCCGCATCAA+CGG - chr2_1:63094046-63094065 Msa0216900:intron 55.0%
TTCCGCATCAACGGTCTTCC+TGG - chr2_1:63094055-63094074 Msa0216900:intron 55.0%
CACCAGGAAGACCGTTGATG+CGG + chr2_1:63094060-63094079 None:intergenic 55.0%
GAGGGCAACAACCTTTACCC+TGG - chr2_1:63094085-63094104 Msa0216900:intron 55.0%
GGCAACAACCTTTACCCTGG+TGG - chr2_1:63094088-63094107 Msa0216900:intron 55.0%
!! GGGTCAAAGTATTGGCCACC+AGG + chr2_1:63094106-63094125 None:intergenic 55.0%
! GATCGTCGGCTAGACCAAGA+GGG + chr2_1:63094126-63094145 None:intergenic 55.0%
! GGTCTTCCTGGTGTCGGAGA+GGG - chr2_1:63094067-63094086 Msa0216900:intron 60.0%
TTGTTGCCCTCTCCGACACC+AGG + chr2_1:63094076-63094095 None:intergenic 60.0%
! GGATCGTCGGCTAGACCAAG+AGG + chr2_1:63094127-63094146 None:intergenic 60.0%
! GGTCTTCCTGGTGTCGGAGA+GGG - chr2_1:63094067-63094086 Msa0216900:intron 60.0%
TTGTTGCCCTCTCCGACACC+AGG + chr2_1:63094076-63094095 None:intergenic 60.0%
! GGATCGTCGGCTAGACCAAG+AGG + chr2_1:63094127-63094146 None:intergenic 60.0%
! CGGTCTTCCTGGTGTCGGAG+AGG - chr2_1:63094066-63094085 Msa0216900:intron 65.0%
! CGGTCTTCCTGGTGTCGGAG+AGG - chr2_1:63094066-63094085 Msa0216900:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 63092711 63094619 63092711 ID=Msa0216900;Name=Msa0216900
chr2_1 mRNA 63092711 63094619 63092711 ID=Msa0216900-mRNA-1;Parent=Msa0216900;Name=Msa0216900-mRNA-1;_AED=0.07;_eAED=0.07;_QI=83|1|1|1|1|1|3|283|266
chr2_1 exon 63092711 63093503 63092711 ID=Msa0216900-mRNA-1:exon:17557;Parent=Msa0216900-mRNA-1
chr2_1 exon 63093672 63093833 63093672 ID=Msa0216900-mRNA-1:exon:17556;Parent=Msa0216900-mRNA-1
chr2_1 exon 63094408 63094619 63094408 ID=Msa0216900-mRNA-1:exon:17555;Parent=Msa0216900-mRNA-1
chr2_1 five_prime_UTR 63094537 63094619 63094537 ID=Msa0216900-mRNA-1:five_prime_utr;Parent=Msa0216900-mRNA-1
chr2_1 CDS 63094408 63094536 63094408 ID=Msa0216900-mRNA-1:cds;Parent=Msa0216900-mRNA-1
chr2_1 CDS 63093672 63093833 63093672 ID=Msa0216900-mRNA-1:cds;Parent=Msa0216900-mRNA-1
chr2_1 CDS 63092994 63093503 63092994 ID=Msa0216900-mRNA-1:cds;Parent=Msa0216900-mRNA-1
chr2_1 three_prime_UTR 63092711 63092993 63092711 ID=Msa0216900-mRNA-1:three_prime_utr;Parent=Msa0216900-mRNA-1
Gene Sequence

>Msa0216900

ATGGCATTGATGGCTGCTACAGCAAGTTCAGCAGCTGTTGTTAAACAAACTCCTTTCCTTGGTCAAAGGAAGGGTGCTGCCAACCCTCTTAGAGATGTTGTCGCCATGGGAACCTCAAGATTCACCATGGGAAATGAATTGTGGTATGGACCAGACAGAGTGAAATATTTGGGGCCATTTTCAGCTCAGACTCCTTCATACTTAACTGGAGAATTCCCTGGTGATTATGGATGGGACACTGCTGGTTTATCTGCTGATCCAGAAGCATTTGCCAAGAACAGGGCTCTTGAGGTGATCCATGGAAGATGGGCTATGCTAGGAGCACTCGGATGCATCACACCTGAAGTACTTGAAAAATGGGTGAGAGTTGATTTCAAAGAACCAGTTTGGTTCAAAGCAGGATCGCAAATCTTCTCAGAAGGTGGTCTTGACTATTTAGGGAACCCAAACCTTGTTCATGCACAAAGCATCTTAGCAGTACTAGGTTTCCAAGTTGTTCTAATGGGTCTTGTCGAAGGGTTCCGCATCAACGGTCTTCCTGGTGTCGGAGAGGGCAACAACCTTTACCCTGGTGGCCAATACTTTGACCCTCTTGGTCTAGCCGACGATCCAGTTACTTTCGCTGAGCTTAAAGTGAAGGAAATCAAGAATGGAAGATTGGCTATGTTTTCGATGTTTGGTTTCTTTGTTCAAGCTATTGTCACTGGTAAAGGACCTTTGGAGAATCTTTTGGATCACATTGACAACCCTGTTGCCAATAATGCCTGGGTTTATGCCACCAAGTTTGTGCCTGGTTCTTAA

Protein sequence

>Msa0216900

MALMAATASSAAVVKQTPFLGQRKGAANPLRDVVAMGTSRFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFVPGS*