AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0354490


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0354490 MtrunA17_Chr3g0090071 89.681 407 25 2 3 408 1 391 0.0 639
Msa0354490 MtrunA17_Chr4g0020011 72.131 305 67 2 105 407 92 380 4.96e-159 452
Msa0354490 MtrunA17_Chr4g0039291 60.811 296 98 2 111 404 109 388 1.40e-127 373
Msa0354490 MtrunA17_Chr3g0114241 34.084 311 170 7 108 404 427 716 7.29e-48 174
Msa0354490 MtrunA17_Chr2g0320711 26.421 299 191 6 115 404 157 435 5.08e-28 114
Msa0354490 MtrunA17_Chr7g0240091 27.459 244 156 4 165 404 222 448 1.56e-22 99.0
Msa0354490 MtrunA17_Chr7g0245291 27.600 250 146 6 160 405 108 326 4.02e-21 93.6
Msa0354490 MtrunA17_Chr7g0245261 27.935 247 147 6 160 404 101 318 5.60e-18 84.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0354490 AT5G12470.1 60.000 305 104 2 103 405 96 384 1.95e-131 383
Msa0354490 AT3G56140.2 35.238 315 169 8 108 408 200 493 5.70e-51 179
Msa0354490 AT2G40400.2 36.190 315 166 8 108 408 410 703 3.41e-50 181
Msa0354490 AT2G40400.1 36.190 315 166 8 108 408 410 703 3.41e-50 181
Msa0354490 AT3G56140.1 35.238 315 169 8 108 408 419 712 6.75e-50 180
Msa0354490 AT3G56140.3 35.238 315 169 8 108 408 419 712 6.75e-50 180
Msa0354490 AT2G40400.3 36.015 261 133 7 108 354 410 650 4.98e-36 140
Msa0354490 AT5G22790.1 26.733 303 186 8 115 404 154 433 3.88e-25 107
Msa0354490 AT3G08640.1 28.629 248 144 6 164 407 107 325 3.32e-21 94.4
Msa0354490 AT3G08630.1 28.287 251 141 7 164 407 104 322 5.31e-21 93.6
Msa0354490 AT2G37860.3 27.463 335 199 11 86 404 126 432 2.33e-20 92.8
Msa0354490 AT2G37860.4 27.463 335 199 11 86 404 126 432 2.33e-20 92.8

Find 129 sgRNAs with CRISPR-Local

Find 237 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAAAATTTAATTCAATTT+TGG 0.120540 3_1:+25805644 None:intergenic
GTTAAAATTTGGAGGGTTTA+AGG 0.142353 3_1:-25805032 Msa0354490:CDS
TTCAGATGGTTGTTAAAATT+TGG 0.178114 3_1:-25805043 Msa0354490:CDS
TTAGAACTGCTAATACTTAT+TGG 0.179066 3_1:-25802434 Msa0354490:CDS
CTTATTGCCAAATTCTTCTA+TGG 0.222326 3_1:-25803525 Msa0354490:CDS
AATTATTGAGCAACGGATTC+TGG 0.230169 3_1:-25802508 Msa0354490:CDS
GTTAAGGCGGGGCGGGTTCC+TGG 0.231023 3_1:-25805109 Msa0354490:CDS
AGGACATCCATAGAAGAATT+TGG 0.239459 3_1:+25803518 None:intergenic
TAGAACTGCTAATACTTATT+GGG 0.243568 3_1:-25802433 Msa0354490:CDS
GGGAGTGGAGGTGGTGGTGG+AGG 0.254142 3_1:-25805250 Msa0354490:CDS
GGAGAGATTTCCGGCGGATT+TGG 0.270043 3_1:-25805140 Msa0354490:CDS
TTGGTTAAGCCTTTATCTTC+TGG 0.287578 3_1:+25802278 None:intergenic
GGAAATGGAGGCGGGTTTCC+AGG 0.296038 3_1:-25805271 Msa0354490:CDS
AGAAGAGGCAATGCTGGTTT+TGG 0.304142 3_1:-25805182 Msa0354490:CDS
GTTACTTTATCTTAGGTAAC+AGG 0.304911 3_1:-25803627 Msa0354490:intron
CATCTCTTATGCAGCGTAAC+GGG 0.313556 3_1:-25803187 Msa0354490:intron
GGAGGGGACGACGGTGGAGG+TGG 0.319532 3_1:-25805232 Msa0354490:CDS
ATGGCTACAGTGGTAGAAAT+TGG 0.319898 3_1:+25805438 None:intergenic
GTTCTTAACTAAGCTTGTTA+TGG 0.322891 3_1:-25804987 Msa0354490:CDS
AAATGATTTGGCATGAAAAT+AGG 0.325107 3_1:+25805328 None:intergenic
TAGGTAACAGGCATTGTAAC+AGG 0.333404 3_1:-25803615 Msa0354490:CDS
AGAGAAAGAGAGAGATTAGT+TGG 0.340765 3_1:+25805541 None:intergenic
CGACGGTGGAGGTGGGGAAG+AGG 0.344446 3_1:-25805224 Msa0354490:CDS
GGATTTGGCTGTTGCTGTTA+AGG 0.361357 3_1:-25805125 Msa0354490:CDS
GCTACACTGGTTGAGATTAC+AGG 0.377802 3_1:+25802913 None:intergenic
CCAGGGAGTGGAGGTGGTGG+TGG 0.383497 3_1:-25805253 Msa0354490:CDS
GGAGAATGAAGCAAATGATT+TGG 0.388629 3_1:+25805316 None:intergenic
TATGAGTTCAATTCAAAGCT+TGG 0.390646 3_1:-25802221 Msa0354490:three_prime_UTR
AAGAGATAGGTTGGACGTTA+AGG 0.394682 3_1:-25802051 Msa0354490:three_prime_UTR
TTGAGAGTTGACAACTTAGT+TGG 0.395524 3_1:+25802013 None:intergenic
GGAGTGGAGGTGGTGGTGGA+GGG 0.398739 3_1:-25805249 Msa0354490:CDS
AAATCATTTGCTTCATTCTC+CGG 0.399692 3_1:-25805314 Msa0354490:CDS
ACGTCTTCCTCAGCTGGAAA+TGG 0.400051 3_1:-25805286 Msa0354490:CDS
GGGTTTCCAGGGAGTGGAGG+TGG 0.402523 3_1:-25805259 Msa0354490:CDS
TGTTGCTGTTAAGGCGGGGC+GGG 0.402815 3_1:-25805116 Msa0354490:CDS
GAGGTGGGGAAGAGGAAGAA+AGG 0.408212 3_1:-25805216 Msa0354490:CDS
TTGGCTGTTGCTGTTAAGGC+GGG 0.411375 3_1:-25805121 Msa0354490:CDS
AAAGAGAGAGATTAGTTGGT+TGG 0.417096 3_1:+25805545 None:intergenic
GTTTCCACGTCTTCCTCAGC+TGG 0.423746 3_1:-25805292 Msa0354490:CDS
TTTCCAGGGAGTGGAGGTGG+TGG 0.425609 3_1:-25805256 Msa0354490:CDS
TCTCAACAGGTGGCTTTGGC+AGG 0.431996 3_1:-25803312 Msa0354490:intron
TAGGTCGATGGAGAGATTTC+CGG 0.435176 3_1:-25805149 Msa0354490:CDS
ATGAGTTCAATTCAAAGCTT+GGG 0.435415 3_1:-25802220 Msa0354490:three_prime_UTR
GGTGGAGGGGACGACGGTGG+AGG 0.436244 3_1:-25805235 Msa0354490:CDS
GAGTGGAGGTGGTGGTGGAG+GGG 0.437741 3_1:-25805248 Msa0354490:CDS
GGCGGGTTTCCAGGGAGTGG+AGG 0.439477 3_1:-25805262 Msa0354490:CDS
AGGGGACGACGGTGGAGGTG+GGG 0.442749 3_1:-25805230 Msa0354490:CDS
TCCTCAGCTGGAAATGGAGG+CGG 0.448506 3_1:-25805280 Msa0354490:CDS
AGGGTTTAAGGAAAGGTTGT+TGG 0.448786 3_1:-25805020 Msa0354490:CDS
AGAAAATTTCACAAAGGAGA+TGG 0.457962 3_1:-25804342 Msa0354490:CDS
GAACAAGTGTGTTGAAATGT+TGG 0.464025 3_1:+25805483 None:intergenic
AGTTGGAACCGGTGCTTCAC+TGG 0.464486 3_1:-25803150 Msa0354490:intron
GGTGGTGGAGGGGACGACGG+TGG 0.467989 3_1:-25805238 Msa0354490:CDS
AGAAGAATGTAGAAACTTCA+TGG 0.468874 3_1:+25805383 None:intergenic
ACAAAGAATAGGTGCTATAG+TGG 0.469138 3_1:-25803271 Msa0354490:intron
GGCAGAAGAATGATTGAGCT+TGG 0.469499 3_1:+25805357 None:intergenic
ATAAGTCCAGCACTAATTGC+AGG 0.470510 3_1:+25803543 None:intergenic
TCTTTCTCTCAATACTCAAA+TGG 0.471402 3_1:-25805527 Msa0354490:exon
AGCCTTCTGTGCATTGATCA+AGG 0.477024 3_1:+25802966 None:intergenic
TGAGAGTTGACAACTTAGTT+GGG 0.480132 3_1:+25802014 None:intergenic
ATCTCAACCAGTGTAGCATA+TGG 0.481640 3_1:-25802907 Msa0354490:CDS
GCTGAGGAAGACGTGGAAAC+CGG 0.484794 3_1:+25805295 None:intergenic
CCACCACCACCTCCACTCCC+TGG 0.485227 3_1:+25805253 None:intergenic
TACTCAAATGGCTATGGCTA+TGG 0.488749 3_1:-25805515 Msa0354490:exon
TATCTTGTCATGCAAGGTAA+TGG 0.494514 3_1:+25802255 None:intergenic
GGGGCAAAGCTGTTCGTAGT+TGG 0.495711 3_1:-25803167 Msa0354490:CDS
CCTCCTCCTGCAATTAGTGC+TGG 0.497096 3_1:-25803549 Msa0354490:CDS
GAGGGGACGACGGTGGAGGT+GGG 0.499909 3_1:-25805231 Msa0354490:CDS
GGTTGGAGTCCAGAAGATAA+AGG 0.501111 3_1:-25802287 Msa0354490:CDS
GGAGGCGGGTTTCCAGGGAG+TGG 0.502191 3_1:-25805265 Msa0354490:CDS
GAATGTAGAAACTTCATGGC+GGG 0.502281 3_1:+25805387 None:intergenic
AAGCTGTTCGTAGTTGGAAC+CGG 0.502348 3_1:-25803161 Msa0354490:CDS
AAATAGAGAAGAGGCAATGC+TGG 0.504483 3_1:-25805188 Msa0354490:CDS
TTAACGTCCAACCTATCTCT+TGG 0.505533 3_1:+25802053 None:intergenic
CCTCAGCTGGAAATGGAGGC+GGG 0.507161 3_1:-25805279 Msa0354490:CDS
AGGTGGGGAAGAGGAAGAAA+GGG 0.508679 3_1:-25805215 Msa0354490:CDS
CTTGTTTACCAGTGAAGCAC+CGG 0.509227 3_1:+25803142 None:intergenic
TTGGAACCTTTGATGAAGCT+TGG 0.509481 3_1:+25804577 None:intergenic
AGATGGTTGTTAAAATTTGG+AGG 0.512940 3_1:-25805040 Msa0354490:CDS
GGCTGAGGCTGGTAGGTCGA+TGG 0.513465 3_1:-25805161 Msa0354490:CDS
TTATAAGCCAAGAGATAGGT+TGG 0.513547 3_1:-25802060 Msa0354490:three_prime_UTR
TTAAGAGAAACAGTGGGAGC+AGG 0.517008 3_1:+25803573 None:intergenic
GAAATGGAGGCGGGTTTCCA+GGG 0.520597 3_1:-25805270 Msa0354490:CDS
TACACACTTCTACAAAGAAT+AGG 0.530718 3_1:-25803282 Msa0354490:CDS
GATGGTTGTTAAAATTTGGA+GGG 0.533288 3_1:-25805039 Msa0354490:CDS
TCAGATATTGACTACTAGCT+TGG 0.533490 3_1:-25804613 Msa0354490:intron
ATCAGATATCAAGTACTAGC+AGG 0.534043 3_1:-25802531 Msa0354490:intron
TTTGGCTGTTGCTGTTAAGG+CGG 0.535226 3_1:-25805122 Msa0354490:CDS
AATTTGGAGGGTTTAAGGAA+AGG 0.537593 3_1:-25805027 Msa0354490:CDS
TCTCAATACTCAAATGGCTA+TGG 0.538146 3_1:-25805521 Msa0354490:exon
GTAAATACCATATGCTACAC+TGG 0.540850 3_1:+25802900 None:intergenic
ATGGAGGGTCTAAGTGTAGT+GGG 0.544183 3_1:+25805580 None:intergenic
TGGTAGTAGTTAGCAACCTC+AGG 0.544386 3_1:-25802876 Msa0354490:intron
GGGTTCCTGGTTCGATAGTG+AGG 0.546193 3_1:-25805096 Msa0354490:CDS
TGTAGCTTGGTAAAGAAGAA+TGG 0.548341 3_1:+25805419 None:intergenic
AGAACTGCTAATACTTATTG+GGG 0.552784 3_1:-25802432 Msa0354490:CDS
GGTGGTGGTGGAGGGGACGA+CGG 0.554039 3_1:-25805241 Msa0354490:CDS
TATATGTTTGAGTAGGTGGG+TGG 0.565043 3_1:-25802323 Msa0354490:intron
CCAGCACTAATTGCAGGAGG+AGG 0.574932 3_1:+25803549 None:intergenic
TTGTCATGCAAGGTAATGGT+TGG 0.574947 3_1:+25802259 None:intergenic
AATGGAGGGTCTAAGTGTAG+TGG 0.577861 3_1:+25805579 None:intergenic
TATATATATCTTGTCATGCA+AGG 0.580979 3_1:+25802249 None:intergenic
CTGTTGCTGTTAAGGCGGGG+CGG 0.583576 3_1:-25805117 Msa0354490:CDS
CCCGCCTCCATTTCCAGCTG+AGG 0.587884 3_1:+25805279 None:intergenic
AGGAGGTTTAAGAGAAACAG+TGG 0.589294 3_1:+25803566 None:intergenic
TCATCTCTTATGCAGCGTAA+CGG 0.589590 3_1:-25803188 Msa0354490:intron
AACCTCCTCACTATCGAACC+AGG 0.592357 3_1:+25805091 None:intergenic
TAGCAGGAATTATTGAGCAA+CGG 0.592464 3_1:-25802515 Msa0354490:CDS
ATCTCTTATGCAGCGTAACG+GGG 0.596886 3_1:-25803186 Msa0354490:intron
TCTTCCTCAGCTGGAAATGG+AGG 0.600023 3_1:-25805283 Msa0354490:CDS
TGCCTTGATCAATGCACAGA+AGG 0.602798 3_1:-25802968 Msa0354490:CDS
TTCCTGGTTCGATAGTGAGG+AGG 0.603087 3_1:-25805093 Msa0354490:CDS
AAGGGACAGAAATAGAGAAG+AGG 0.605037 3_1:-25805197 Msa0354490:CDS
ACAGCAACAGCCAAATCCGC+CGG 0.617065 3_1:+25805130 None:intergenic
AATGTAGAAACTTCATGGCG+GGG 0.626602 3_1:+25805388 None:intergenic
GCTCAACCAAGCTTCATCAA+AGG 0.627156 3_1:-25804583 Msa0354490:intron
TGGCATGAAAATAGGTGCAG+AGG 0.627627 3_1:+25805336 None:intergenic
GTGTGTTGAAATGTTGGAGA+AGG 0.628543 3_1:+25805489 None:intergenic
GTAAAGAAGAATGGCTACAG+TGG 0.628594 3_1:+25805428 None:intergenic
TGTTGTTGTCATCTTCACCA+AGG 0.629999 3_1:-25804960 Msa0354490:intron
CGGGGTGTGATGATGTAGCT+TGG 0.634020 3_1:+25805406 None:intergenic
ATTTCCAGCTGAGGAAGACG+TGG 0.640083 3_1:+25805288 None:intergenic
TGTAGCATATGGTATTTACA+TGG 0.640369 3_1:-25802896 Msa0354490:CDS
TGGCTGTTGCTGTTAAGGCG+GGG 0.645154 3_1:-25805120 Msa0354490:CDS
GCGAAAAGAAAATTTCACAA+AGG 0.660036 3_1:-25804348 Msa0354490:CDS
GGAGGTTTAAGAGAAACAGT+GGG 0.664978 3_1:+25803567 None:intergenic
GTCGATGGAGAGATTTCCGG+CGG 0.669889 3_1:-25805146 Msa0354490:CDS
AGTCCAGCACTAATTGCAGG+AGG 0.693475 3_1:+25803546 None:intergenic
AGAATGTAGAAACTTCATGG+CGG 0.732790 3_1:+25805386 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATATTTTTAAGCAAATAA+TGG + chr3_1:25803188-25803207 None:intergenic 10.0%
!!! AAAAATATTAAGATTGTTTT+CGG - chr3_1:25803198-25803217 Msa0354490:intron 10.0%
!! AATACACTAAATTGTAATAA+TGG + chr3_1:25802754-25802773 None:intergenic 15.0%
!!! TTTTTATACTGAATATGAAA+AGG + chr3_1:25804233-25804252 None:intergenic 15.0%
!! TTATCTTTCGTTAATTAAAT+AGG + chr3_1:25804289-25804308 None:intergenic 15.0%
!!! ATGTTTTTTCTTTTATCTAA+GGG - chr3_1:25805115-25805134 Msa0354490:CDS 15.0%
!!! CTCTATTTTACTTGTTTTTT+AGG + chr3_1:25802886-25802905 None:intergenic 20.0%
!!! ATAAGTTGTTTTAGAATATG+AGG - chr3_1:25802908-25802927 Msa0354490:CDS 20.0%
!!! TTCTCAAATTTTTTGTTTGA+CGG + chr3_1:25803407-25803426 None:intergenic 20.0%
!!! TCAAATTGTTATTACTCATT+AGG - chr3_1:25803460-25803479 Msa0354490:intron 20.0%
!! TGAAAAAGAATAAATGATGA+AGG + chr3_1:25803942-25803961 None:intergenic 20.0%
!! AAATTCATGGATTCTATAAT+TGG + chr3_1:25804642-25804661 None:intergenic 20.0%
!!! GATGTTTTTTCTTTTATCTA+AGG - chr3_1:25805114-25805133 Msa0354490:CDS 20.0%
!! AAAAACAAACTTATACTAAC+TGG - chr3_1:25805210-25805229 Msa0354490:CDS 20.0%
!!! TGGTTCTTTCTTTTTTATTT+TGG - chr3_1:25805516-25805535 Msa0354490:exon 20.0%
!! AAATGATTTGGCATGAAAAT+AGG + chr3_1:25802356-25802375 None:intergenic 25.0%
! TTCAGATGGTTGTTAAAATT+TGG - chr3_1:25802638-25802657 Msa0354490:intron 25.0%
!! GTAATAATGGAAATAAACCT+TGG + chr3_1:25802741-25802760 None:intergenic 25.0%
! TAAAGGTAACAAAAGGAATT+TGG + chr3_1:25803126-25803145 None:intergenic 25.0%
! AGAAAATTAGCCATATGAAA+TGG - chr3_1:25803271-25803290 Msa0354490:intron 25.0%
! GATAAGATATCCATTTCATA+TGG + chr3_1:25803284-25803303 None:intergenic 25.0%
!! GTTTGCTAAATATACATTTG+TGG - chr3_1:25803548-25803567 Msa0354490:CDS 25.0%
!! TAATTATTAATTTGACCGAC+TGG + chr3_1:25803633-25803652 None:intergenic 25.0%
!!! TACCAAGCTTTATTTATCAA+CGG + chr3_1:25803689-25803708 None:intergenic 25.0%
! AAAGAATAAATGATGAAGGT+TGG + chr3_1:25803938-25803957 None:intergenic 25.0%
! AAGTAACAAACTGAATAAGA+CGG + chr3_1:25804041-25804060 None:intergenic 25.0%
!!! TCAGTTTGTTACTTTATCTT+AGG - chr3_1:25804047-25804066 Msa0354490:intron 25.0%
!!! TTAACTTGAAAAGCATTTTC+AGG + chr3_1:25804186-25804205 None:intergenic 25.0%
! AACAACTGATCATATATGTT+TGG + chr3_1:25804334-25804353 None:intergenic 25.0%
! AAGCAAATAACTATTTGACT+TGG + chr3_1:25804456-25804475 None:intergenic 25.0%
! AGTTATTTGCTTATAAGTGA+AGG - chr3_1:25804464-25804483 Msa0354490:intron 25.0%
! AGAGGTTAAAACAAAGTAAA+AGG + chr3_1:25804590-25804609 None:intergenic 25.0%
! ATACAAACATTCACAAAAAG+AGG + chr3_1:25804608-25804627 None:intergenic 25.0%
! CCAGTAATGTTATAAATTCA+TGG + chr3_1:25804655-25804674 None:intergenic 25.0%
! CCATGAATTTATAACATTAC+TGG - chr3_1:25804652-25804671 Msa0354490:intron 25.0%
!!! TTTCAATGATTTTTTCAGGT+TGG - chr3_1:25804675-25804694 Msa0354490:intron 25.0%
!!! ATTATGTAGTAGTTTGTTGA+AGG + chr3_1:25804844-25804863 None:intergenic 25.0%
! AACAAACTACTACATAATTC+CGG - chr3_1:25804846-25804865 Msa0354490:intron 25.0%
! TTTATATCCTCAAATTGTTG+TGG - chr3_1:25805026-25805045 Msa0354490:CDS 25.0%
! TTAGAACTGCTAATACTTAT+TGG - chr3_1:25805247-25805266 Msa0354490:CDS 25.0%
! TAGAACTGCTAATACTTATT+GGG - chr3_1:25805248-25805267 Msa0354490:CDS 25.0%
!! TATATTCTTCTTAGTTCTCA+TGG - chr3_1:25805328-25805347 Msa0354490:CDS 25.0%
! TTTGGTATATATGTTTGAGT+AGG - chr3_1:25805351-25805370 Msa0354490:CDS 25.0%
! TATATATATCTTGTCATGCA+AGG + chr3_1:25805435-25805454 None:intergenic 25.0%
! TTCATTCATAGAACTTTGAT+TGG - chr3_1:25805492-25805511 Msa0354490:CDS 25.0%
!!! TTTTATTTTGGAAGTACACA+AGG - chr3_1:25805528-25805547 Msa0354490:exon 25.0%
!!! TTTATTTTGGAAGTACACAA+GGG - chr3_1:25805529-25805548 Msa0354490:exon 25.0%
!!! TTTTTTATAAGCCAAGAGAT+AGG - chr3_1:25805617-25805636 Msa0354490:five_prime_UTR 25.0%
TCTTTCTCTCAATACTCAAA+TGG - chr3_1:25802154-25802173 Msa0354490:intron 30.0%
AGAAGAATGTAGAAACTTCA+TGG + chr3_1:25802301-25802320 None:intergenic 30.0%
AAATCATTTGCTTCATTCTC+CGG - chr3_1:25802367-25802386 Msa0354490:intron 30.0%
AGATGGTTGTTAAAATTTGG+AGG - chr3_1:25802641-25802660 Msa0354490:intron 30.0%
GATGGTTGTTAAAATTTGGA+GGG - chr3_1:25802642-25802661 Msa0354490:intron 30.0%
GTTAAAATTTGGAGGGTTTA+AGG - chr3_1:25802649-25802668 Msa0354490:intron 30.0%
!! GTTCTTAACTAAGCTTGTTA+TGG - chr3_1:25802694-25802713 Msa0354490:intron 30.0%
TACTAGAATAGAACTTGCAT+TGG - chr3_1:25802938-25802957 Msa0354490:CDS 30.0%
TATGCAAAATGTACACTCTT+GGG - chr3_1:25802964-25802983 Msa0354490:CDS 30.0%
CAACTTGTAAAGGTAACAAA+AGG + chr3_1:25803133-25803152 None:intergenic 30.0%
! CTTTTGTTACCTTTACAAGT+TGG - chr3_1:25803131-25803150 Msa0354490:intron 30.0%
! TCATCACTCTTTTGTTAGTA+TGG + chr3_1:25803249-25803268 None:intergenic 30.0%
! TGGATATCTTATCTGTTTTC+AGG - chr3_1:25803291-25803310 Msa0354490:CDS 30.0%
GCGAAAAGAAAATTTCACAA+AGG - chr3_1:25803333-25803352 Msa0354490:intron 30.0%
AGAAAATTTCACAAAGGAGA+TGG - chr3_1:25803339-25803358 Msa0354490:intron 30.0%
! GTTACTTTATCTTAGGTAAC+AGG - chr3_1:25804054-25804073 Msa0354490:intron 30.0%
!! TAACAGGTTTTGTACTAGTT+TGG - chr3_1:25804082-25804101 Msa0354490:intron 30.0%
CTTATTGCCAAATTCTTCTA+TGG - chr3_1:25804156-25804175 Msa0354490:intron 30.0%
CTGATCATATATGTTTGGAT+CGG + chr3_1:25804329-25804348 None:intergenic 30.0%
! TGAATTTTCGTTTTCTCAAC+AGG - chr3_1:25804356-25804375 Msa0354490:CDS 30.0%
TACACACTTCTACAAAGAAT+AGG - chr3_1:25804399-25804418 Msa0354490:intron 30.0%
!!! CTGGTTTCAATGATTTTTTC+AGG - chr3_1:25804671-25804690 Msa0354490:intron 30.0%
!!! TGATTTTTTCAGGTTGGTAT+AGG - chr3_1:25804681-25804700 Msa0354490:intron 30.0%
TGTAGCATATGGTATTTACA+TGG - chr3_1:25804785-25804804 Msa0354490:intron 30.0%
TTGATTGATTACTAACTGTC+CGG + chr3_1:25804868-25804887 None:intergenic 30.0%
TGCTTGTGCATATACTTATT+TGG - chr3_1:25804891-25804910 Msa0354490:intron 30.0%
! TACTTATTTGGACTTTTGAG+AGG - chr3_1:25804903-25804922 Msa0354490:intron 30.0%
CATTGAACATGTCTTCAATA+TGG + chr3_1:25804972-25804991 None:intergenic 30.0%
AGAACTGCTAATACTTATTG+GGG - chr3_1:25805249-25805268 Msa0354490:CDS 30.0%
GTATATATGTTTGAGTAGGT+GGG - chr3_1:25805355-25805374 Msa0354490:CDS 30.0%
TATGAGTTCAATTCAAAGCT+TGG - chr3_1:25805460-25805479 Msa0354490:CDS 30.0%
ATGAGTTCAATTCAAAGCTT+GGG - chr3_1:25805461-25805480 Msa0354490:CDS 30.0%
TTCATAGAACTTTGATTGGT+TGG - chr3_1:25805496-25805515 Msa0354490:CDS 30.0%
TGGTGACAGTTAAAAATGGA+GGG + chr3_1:25802119-25802138 None:intergenic 35.0%
! TTGGTGACAGTTAAAAATGG+AGG + chr3_1:25802120-25802139 None:intergenic 35.0%
!! TGGTTGGTGACAGTTAAAAA+TGG + chr3_1:25802123-25802142 None:intergenic 35.0%
! AAAGAGAGAGATTAGTTGGT+TGG + chr3_1:25802139-25802158 None:intergenic 35.0%
AGAGAAAGAGAGAGATTAGT+TGG + chr3_1:25802143-25802162 None:intergenic 35.0%
TCTCAATACTCAAATGGCTA+TGG - chr3_1:25802160-25802179 Msa0354490:intron 35.0%
GAACAAGTGTGTTGAAATGT+TGG + chr3_1:25802201-25802220 None:intergenic 35.0%
TGTAGCTTGGTAAAGAAGAA+TGG + chr3_1:25802265-25802284 None:intergenic 35.0%
AGAATGTAGAAACTTCATGG+CGG + chr3_1:25802298-25802317 None:intergenic 35.0%
GGAGAATGAAGCAAATGATT+TGG + chr3_1:25802368-25802387 None:intergenic 35.0%
AATTTGGAGGGTTTAAGGAA+AGG - chr3_1:25802654-25802673 Msa0354490:intron 35.0%
CTATGCAAAATGTACACTCT+TGG - chr3_1:25802963-25802982 Msa0354490:CDS 35.0%
AAATGTACACTCTTGGGATT+AGG - chr3_1:25802970-25802989 Msa0354490:CDS 35.0%
! TCCAATTTTTGTGTCAGAGT+TGG - chr3_1:25803022-25803041 Msa0354490:intron 35.0%
ACCAACTCTGACACAAAAAT+TGG + chr3_1:25803026-25803045 None:intergenic 35.0%
! TCAGATATTGACTACTAGCT+TGG - chr3_1:25803068-25803087 Msa0354490:intron 35.0%
AGAGAGATTCCAACTTGTAA+AGG + chr3_1:25803143-25803162 None:intergenic 35.0%
!!! GGATTTTGTTGTTGCTAATG+TGG - chr3_1:25803360-25803379 Msa0354490:intron 35.0%
!!! TTTTTTGCCTATGACTTTCC+AGG - chr3_1:25803429-25803448 Msa0354490:intron 35.0%
CTAAATTACATGCACCATAG+CGG + chr3_1:25803609-25803628 None:intergenic 35.0%
! TGCCGTTGATAAATAAAGCT+TGG - chr3_1:25803684-25803703 Msa0354490:intron 35.0%
!! TTAAGTGCTGACATACATTG+TGG - chr3_1:25803825-25803844 Msa0354490:intron 35.0%
TGCGACATCAAGAAGATTAT+TGG + chr3_1:25803967-25803986 None:intergenic 35.0%
! ATCTTCTTGATGTCGCATTT+TGG - chr3_1:25803970-25803989 Msa0354490:intron 35.0%
AGGACATCCATAGAAGAATT+TGG + chr3_1:25804166-25804185 None:intergenic 35.0%
! ATTTTCGTTTTCTCAACAGG+TGG - chr3_1:25804359-25804378 Msa0354490:CDS 35.0%
! ACAAAGAATAGGTGCTATAG+TGG - chr3_1:25804410-25804429 Msa0354490:intron 35.0%
GTAAATACCATATGCTACAC+TGG + chr3_1:25804784-25804803 None:intergenic 35.0%
!! AGTAGTTTGTTGAAGGAAGA+TGG + chr3_1:25804837-25804856 None:intergenic 35.0%
!! TATTTGGACTTTTGAGAGGT+AGG - chr3_1:25804907-25804926 Msa0354490:intron 35.0%
ATGTCTTCAATATGGAGTGT+CGG + chr3_1:25804964-25804983 None:intergenic 35.0%
GACATGTTCAATGTCTAACA+CGG - chr3_1:25804979-25804998 Msa0354490:CDS 35.0%
ATCAGATATCAAGTACTAGC+AGG - chr3_1:25805150-25805169 Msa0354490:CDS 35.0%
TAGCAGGAATTATTGAGCAA+CGG - chr3_1:25805166-25805185 Msa0354490:CDS 35.0%
! AATTATTGAGCAACGGATTC+TGG - chr3_1:25805173-25805192 Msa0354490:CDS 35.0%
!!! AGTTTGTTTTTGCGTAGCAA+TGG + chr3_1:25805201-25805220 None:intergenic 35.0%
! TCTTCTTAGTTCTCATGGTT+TGG - chr3_1:25805333-25805352 Msa0354490:CDS 35.0%
GGTATATATGTTTGAGTAGG+TGG - chr3_1:25805354-25805373 Msa0354490:CDS 35.0%
TTGGTTAAGCCTTTATCTTC+TGG + chr3_1:25805406-25805425 None:intergenic 35.0%
TATCTTGTCATGCAAGGTAA+TGG + chr3_1:25805429-25805448 None:intergenic 35.0%
TTATAAGCCAAGAGATAGGT+TGG - chr3_1:25805621-25805640 Msa0354490:five_prime_UTR 35.0%
TACTCAAATGGCTATGGCTA+TGG - chr3_1:25802166-25802185 Msa0354490:intron 40.0%
GTGTGTTGAAATGTTGGAGA+AGG + chr3_1:25802195-25802214 None:intergenic 40.0%
ATGGCTACAGTGGTAGAAAT+TGG + chr3_1:25802246-25802265 None:intergenic 40.0%
GTAAAGAAGAATGGCTACAG+TGG + chr3_1:25802256-25802275 None:intergenic 40.0%
AATGTAGAAACTTCATGGCG+GGG + chr3_1:25802296-25802315 None:intergenic 40.0%
GAATGTAGAAACTTCATGGC+GGG + chr3_1:25802297-25802316 None:intergenic 40.0%
AAGGGACAGAAATAGAGAAG+AGG - chr3_1:25802484-25802503 Msa0354490:CDS 40.0%
AAATAGAGAAGAGGCAATGC+TGG - chr3_1:25802493-25802512 Msa0354490:CDS 40.0%
!!! AGTGAGGAGGTTTTTTGAGT+TGG - chr3_1:25802601-25802620 Msa0354490:intron 40.0%
!! AGGAGTCAGTTGTTTTCAGA+TGG - chr3_1:25802624-25802643 Msa0354490:intron 40.0%
AGGGTTTAAGGAAAGGTTGT+TGG - chr3_1:25802661-25802680 Msa0354490:intron 40.0%
TGTTGTTGTCATCTTCACCA+AGG - chr3_1:25802721-25802740 Msa0354490:intron 40.0%
TTGGAACCTTTGATGAAGCT+TGG + chr3_1:25803107-25803126 None:intergenic 40.0%
AAGTTGGAATCTCTCTCTAC+AGG - chr3_1:25803147-25803166 Msa0354490:intron 40.0%
AACAATTTGAACCCTGATCC+TGG + chr3_1:25803450-25803469 None:intergenic 40.0%
CGCTATGGTGCATGTAATTT+AGG - chr3_1:25803607-25803626 Msa0354490:CDS 40.0%
TGCATGTAATTTAGGCCAGT+CGG - chr3_1:25803615-25803634 Msa0354490:CDS 40.0%
ATTGTGGCAAGGTTCTTAGT+TGG - chr3_1:25803841-25803860 Msa0354490:intron 40.0%
! TAGGTAACAGGCATTGTAAC+AGG - chr3_1:25804066-25804085 Msa0354490:intron 40.0%
GGAGGTTTAAGAGAAACAGT+GGG + chr3_1:25804117-25804136 None:intergenic 40.0%
AGGAGGTTTAAGAGAAACAG+TGG + chr3_1:25804118-25804137 None:intergenic 40.0%
ATAAGTCCAGCACTAATTGC+AGG + chr3_1:25804141-25804160 None:intergenic 40.0%
! GGTGCTATAGTGGTATGTAT+TGG - chr3_1:25804420-25804439 Msa0354490:intron 40.0%
TCATCTCTTATGCAGCGTAA+CGG - chr3_1:25804493-25804512 Msa0354490:intron 40.0%
ATCTCAACCAGTGTAGCATA+TGG - chr3_1:25804774-25804793 Msa0354490:intron 40.0%
AGGAAGATGGAATATACCTG+AGG + chr3_1:25804824-25804843 None:intergenic 40.0%
TCGACATCCACAACAATTTG+AGG + chr3_1:25805036-25805055 None:intergenic 40.0%
TATATGTTTGAGTAGGTGGG+TGG - chr3_1:25805358-25805377 Msa0354490:CDS 40.0%
! TTGTCATGCAAGGTAATGGT+TGG + chr3_1:25805425-25805444 None:intergenic 40.0%
TTAACGTCCAACCTATCTCT+TGG + chr3_1:25805631-25805650 None:intergenic 40.0%
! AAGAGATAGGTTGGACGTTA+AGG - chr3_1:25805630-25805649 Msa0354490:five_prime_UTR 40.0%
ATGGAGGGTCTAAGTGTAGT+GGG + chr3_1:25802104-25802123 None:intergenic 45.0%
AATGGAGGGTCTAAGTGTAG+TGG + chr3_1:25802105-25802124 None:intergenic 45.0%
GGCAGAAGAATGATTGAGCT+TGG + chr3_1:25802327-25802346 None:intergenic 45.0%
TGGCATGAAAATAGGTGCAG+AGG + chr3_1:25802348-25802367 None:intergenic 45.0%
!!! AGAAGAGGCAATGCTGGTTT+TGG - chr3_1:25802499-25802518 Msa0354490:CDS 45.0%
TAGGTCGATGGAGAGATTTC+CGG - chr3_1:25802532-25802551 Msa0354490:intron 45.0%
! GGATTTGGCTGTTGCTGTTA+AGG - chr3_1:25802556-25802575 Msa0354490:intron 45.0%
! TTTGGCTGTTGCTGTTAAGG+CGG - chr3_1:25802559-25802578 Msa0354490:intron 45.0%
!!! GAGGAGGTTTTTTGAGTTGG+AGG - chr3_1:25802604-25802623 Msa0354490:intron 45.0%
GCTCAACCAAGCTTCATCAA+AGG - chr3_1:25803098-25803117 Msa0354490:intron 45.0%
CCTATGACTTTCCAGGATCA+GGG - chr3_1:25803436-25803455 Msa0354490:intron 45.0%
TTGTGTTAGATCCTCCGCTA+TGG - chr3_1:25803592-25803611 Msa0354490:CDS 45.0%
AATTACATGCACCATAGCGG+AGG + chr3_1:25803606-25803625 None:intergenic 45.0%
TGCTGACATACATTGTGGCA+AGG - chr3_1:25803830-25803849 Msa0354490:intron 45.0%
TTAAGAGAAACAGTGGGAGC+AGG + chr3_1:25804111-25804130 None:intergenic 45.0%
! GTTTTCTCAACAGGTGGCTT+TGG - chr3_1:25804365-25804384 Msa0354490:CDS 45.0%
CATCTCTTATGCAGCGTAAC+GGG - chr3_1:25804494-25804513 Msa0354490:intron 45.0%
ATCTCTTATGCAGCGTAACG+GGG - chr3_1:25804495-25804514 Msa0354490:intron 45.0%
AAGCTGTTCGTAGTTGGAAC+CGG - chr3_1:25804520-25804539 Msa0354490:intron 45.0%
CTTGTTTACCAGTGAAGCAC+CGG + chr3_1:25804542-25804561 None:intergenic 45.0%
TGCCTTGATCAATGCACAGA+AGG - chr3_1:25804713-25804732 Msa0354490:intron 45.0%
! AGCCTTCTGTGCATTGATCA+AGG + chr3_1:25804718-25804737 None:intergenic 45.0%
! GCTACACTGGTTGAGATTAC+AGG + chr3_1:25804771-25804790 None:intergenic 45.0%
TGGTAGTAGTTAGCAACCTC+AGG - chr3_1:25804805-25804824 Msa0354490:intron 45.0%
!! GTGGGTGGATTTTGCAAGAT+GGG - chr3_1:25805373-25805392 Msa0354490:CDS 45.0%
! GTGGATTTTGCAAGATGGGT+TGG - chr3_1:25805377-25805396 Msa0354490:CDS 45.0%
GGTTGGAGTCCAGAAGATAA+AGG - chr3_1:25805394-25805413 Msa0354490:CDS 45.0%
!!! TTTAAAATTTAATTCAATTT+TGG + chr3_1:25802040-25802059 None:intergenic 5.0%
ATTTCCAGCTGAGGAAGACG+TGG + chr3_1:25802396-25802415 None:intergenic 50.0%
ACGTCTTCCTCAGCTGGAAA+TGG - chr3_1:25802395-25802414 Msa0354490:intron 50.0%
TCTTCCTCAGCTGGAAATGG+AGG - chr3_1:25802398-25802417 Msa0354490:intron 50.0%
AGGTGGGGAAGAGGAAGAAA+GGG - chr3_1:25802466-25802485 Msa0354490:CDS 50.0%
! TTGGCTGTTGCTGTTAAGGC+GGG - chr3_1:25802560-25802579 Msa0354490:intron 50.0%
! TTCCTGGTTCGATAGTGAGG+AGG - chr3_1:25802588-25802607 Msa0354490:intron 50.0%
AACCTCCTCACTATCGAACC+AGG + chr3_1:25802593-25802612 None:intergenic 50.0%
AATTGGACACTGTCGCGTGT+CGG + chr3_1:25803009-25803028 None:intergenic 50.0%
!! TTTTCAGGCAGCTGCAGAGT+TGG - chr3_1:25803306-25803325 Msa0354490:CDS 50.0%
GCCTATGACTTTCCAGGATC+AGG - chr3_1:25803435-25803454 Msa0354490:intron 50.0%
CCCTGATCCTGGAAAGTCAT+AGG + chr3_1:25803439-25803458 None:intergenic 50.0%
AACGGCACGCTGAACTTTCA+CGG + chr3_1:25803671-25803690 None:intergenic 50.0%
AGTCCAGCACTAATTGCAGG+AGG + chr3_1:25804138-25804157 None:intergenic 50.0%
!! GGTGGGTGGATTTTGCAAGA+TGG - chr3_1:25805372-25805391 Msa0354490:CDS 50.0%
! CGGGGTGTGATGATGTAGCT+TGG + chr3_1:25802278-25802297 None:intergenic 55.0%
GCTGAGGAAGACGTGGAAAC+CGG + chr3_1:25802389-25802408 None:intergenic 55.0%
GTTTCCACGTCTTCCTCAGC+TGG - chr3_1:25802389-25802408 Msa0354490:intron 55.0%
TCCTCAGCTGGAAATGGAGG+CGG - chr3_1:25802401-25802420 Msa0354490:intron 55.0%
! GAAATGGAGGCGGGTTTCCA+GGG - chr3_1:25802411-25802430 Msa0354490:intron 55.0%
GAGGTGGGGAAGAGGAAGAA+AGG - chr3_1:25802465-25802484 Msa0354490:CDS 55.0%
!!! GGCAATGCTGGTTTTGGCTG+AGG - chr3_1:25802505-25802524 Msa0354490:CDS 55.0%
!!! ATGCTGGTTTTGGCTGAGGC+TGG - chr3_1:25802509-25802528 Msa0354490:CDS 55.0%
!!! TGGTTTTGGCTGAGGCTGGT+AGG - chr3_1:25802513-25802532 Msa0354490:CDS 55.0%
GTCGATGGAGAGATTTCCGG+CGG - chr3_1:25802535-25802554 Msa0354490:intron 55.0%
! GGAGAGATTTCCGGCGGATT+TGG - chr3_1:25802541-25802560 Msa0354490:intron 55.0%
ACAGCAACAGCCAAATCCGC+CGG + chr3_1:25802554-25802573 None:intergenic 55.0%
! TGGCTGTTGCTGTTAAGGCG+GGG - chr3_1:25802561-25802580 Msa0354490:intron 55.0%
! GGGTTCCTGGTTCGATAGTG+AGG - chr3_1:25802585-25802604 Msa0354490:intron 55.0%
CCAGCACTAATTGCAGGAGG+AGG + chr3_1:25804135-25804154 None:intergenic 55.0%
CCTCCTCCTGCAATTAGTGC+TGG - chr3_1:25804132-25804151 Msa0354490:intron 55.0%
!! TCTCAACAGGTGGCTTTGGC+AGG - chr3_1:25804369-25804388 Msa0354490:CDS 55.0%
GGGGCAAAGCTGTTCGTAGT+TGG - chr3_1:25804514-25804533 Msa0354490:intron 55.0%
AGTTGGAACCGGTGCTTCAC+TGG - chr3_1:25804531-25804550 Msa0354490:intron 55.0%
CCTCAGCTGGAAATGGAGGC+GGG - chr3_1:25802402-25802421 Msa0354490:intron 60.0%
! GGAAATGGAGGCGGGTTTCC+AGG - chr3_1:25802410-25802429 Msa0354490:intron 60.0%
TTTCCAGGGAGTGGAGGTGG+TGG - chr3_1:25802425-25802444 Msa0354490:CDS 60.0%
! CTGTTGCTGTTAAGGCGGGG+CGG - chr3_1:25802564-25802583 Msa0354490:intron 60.0%
! TGTTGCTGTTAAGGCGGGGC+GGG - chr3_1:25802565-25802584 Msa0354490:intron 60.0%
CCCGCCTCCATTTCCAGCTG+AGG + chr3_1:25802405-25802424 None:intergenic 65.0%
GGGTTTCCAGGGAGTGGAGG+TGG - chr3_1:25802422-25802441 Msa0354490:intron 65.0%
!! GGAGTGGAGGTGGTGGTGGA+GGG - chr3_1:25802432-25802451 Msa0354490:CDS 65.0%
!! GAGTGGAGGTGGTGGTGGAG+GGG - chr3_1:25802433-25802452 Msa0354490:CDS 65.0%
GGCTGAGGCTGGTAGGTCGA+TGG - chr3_1:25802520-25802539 Msa0354490:CDS 65.0%
! GGAGGCGGGTTTCCAGGGAG+TGG - chr3_1:25802416-25802435 Msa0354490:intron 70.0%
! GGCGGGTTTCCAGGGAGTGG+AGG - chr3_1:25802419-25802438 Msa0354490:intron 70.0%
CCACCACCACCTCCACTCCC+TGG + chr3_1:25802431-25802450 None:intergenic 70.0%
! CCAGGGAGTGGAGGTGGTGG+TGG - chr3_1:25802428-25802447 Msa0354490:CDS 70.0%
!! GGGAGTGGAGGTGGTGGTGG+AGG - chr3_1:25802431-25802450 Msa0354490:CDS 70.0%
!! GGTGGTGGTGGAGGGGACGA+CGG - chr3_1:25802440-25802459 Msa0354490:CDS 70.0%
GAGGGGACGACGGTGGAGGT+GGG - chr3_1:25802450-25802469 Msa0354490:CDS 70.0%
AGGGGACGACGGTGGAGGTG+GGG - chr3_1:25802451-25802470 Msa0354490:CDS 70.0%
CGACGGTGGAGGTGGGGAAG+AGG - chr3_1:25802457-25802476 Msa0354490:CDS 70.0%
! GTTAAGGCGGGGCGGGTTCC+TGG - chr3_1:25802572-25802591 Msa0354490:intron 70.0%
!! GGTGGTGGAGGGGACGACGG+TGG - chr3_1:25802443-25802462 Msa0354490:CDS 75.0%
GGTGGAGGGGACGACGGTGG+AGG - chr3_1:25802446-25802465 Msa0354490:CDS 75.0%
GGAGGGGACGACGGTGGAGG+TGG - chr3_1:25802449-25802468 Msa0354490:CDS 75.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 25802019 25805684 25802019 ID=Msa0354490;Name=Msa0354490
chr3_1 mRNA 25802019 25805684 25802019 ID=Msa0354490-mRNA-1;Parent=Msa0354490;Name=Msa0354490-mRNA-1;_AED=0.09;_eAED=0.09;_QI=154|0.77|0.9|0.9|0.88|0.8|10|204|408
chr3_1 exon 25802019 25802153 25802019 ID=Msa0354490-mRNA-1:exon:5717;Parent=Msa0354490-mRNA-1
chr3_1 exon 25802213 25802330 25802213 ID=Msa0354490-mRNA-1:exon:5716;Parent=Msa0354490-mRNA-1
chr3_1 exon 25802423 25802548 25802423 ID=Msa0354490-mRNA-1:exon:5715;Parent=Msa0354490-mRNA-1
chr3_1 exon 25802877 25803010 25802877 ID=Msa0354490-mRNA-1:exon:5714;Parent=Msa0354490-mRNA-1
chr3_1 exon 25803151 25803195 25803151 ID=Msa0354490-mRNA-1:exon:5713;Parent=Msa0354490-mRNA-1
chr3_1 exon 25803272 25803325 25803272 ID=Msa0354490-mRNA-1:exon:5712;Parent=Msa0354490-mRNA-1
chr3_1 exon 25803503 25803634 25803503 ID=Msa0354490-mRNA-1:exon:5711;Parent=Msa0354490-mRNA-1
chr3_1 exon 25804322 25804390 25804322 ID=Msa0354490-mRNA-1:exon:5710;Parent=Msa0354490-mRNA-1
chr3_1 exon 25804584 25804631 25804584 ID=Msa0354490-mRNA-1:exon:5709;Parent=Msa0354490-mRNA-1
chr3_1 exon 25804961 25805684 25804961 ID=Msa0354490-mRNA-1:exon:5708;Parent=Msa0354490-mRNA-1
chr3_1 five_prime_UTR 25805531 25805684 25805531 ID=Msa0354490-mRNA-1:five_prime_utr;Parent=Msa0354490-mRNA-1
chr3_1 CDS 25804961 25805530 25804961 ID=Msa0354490-mRNA-1:cds;Parent=Msa0354490-mRNA-1
chr3_1 CDS 25804584 25804631 25804584 ID=Msa0354490-mRNA-1:cds;Parent=Msa0354490-mRNA-1
chr3_1 CDS 25804322 25804390 25804322 ID=Msa0354490-mRNA-1:cds;Parent=Msa0354490-mRNA-1
chr3_1 CDS 25803503 25803634 25803503 ID=Msa0354490-mRNA-1:cds;Parent=Msa0354490-mRNA-1
chr3_1 CDS 25803272 25803325 25803272 ID=Msa0354490-mRNA-1:cds;Parent=Msa0354490-mRNA-1
chr3_1 CDS 25803151 25803195 25803151 ID=Msa0354490-mRNA-1:cds;Parent=Msa0354490-mRNA-1
chr3_1 CDS 25802877 25803010 25802877 ID=Msa0354490-mRNA-1:cds;Parent=Msa0354490-mRNA-1
chr3_1 CDS 25802423 25802548 25802423 ID=Msa0354490-mRNA-1:cds;Parent=Msa0354490-mRNA-1
chr3_1 CDS 25802282 25802330 25802282 ID=Msa0354490-mRNA-1:cds;Parent=Msa0354490-mRNA-1
chr3_1 three_prime_UTR 25802213 25802281 25802213 ID=Msa0354490-mRNA-1:three_prime_utr;Parent=Msa0354490-mRNA-1
chr3_1 three_prime_UTR 25802019 25802153 25802019 ID=Msa0354490-mRNA-1:three_prime_utr;Parent=Msa0354490-mRNA-1
Gene Sequence

>Msa0354490

ATGGCTATGGCTATGGCTTCCTTCTCCAACATTTCAACACACTTGTTCTCTCATCACACTCACACTCAAACCAATTTCTACCACTGTAGCCATTCTTCTTTACCAAGCTACATCATCACACCCCGCCATGAAGTTTCTACATTCTTCTCTTCCAAGCTCAATCATTCTTCTGCCTCTGCACCTATTTTCATGCCAAATCATTTGCTTCATTCTCCGGTTTCCACGTCTTCCTCAGCTGGAAATGGAGGCGGGTTTCCAGGGAGTGGAGGTGGTGGTGGAGGGGACGACGGTGGAGGTGGGGAAGAGGAAGAAAGGGACAGAAATAGAGAAGAGGCAATGCTGGTTTTGGCTGAGGCTGGTAGGTCGATGGAGAGATTTCCGGCGGATTTGGCTGTTGCTGTTAAGGCGGGGCGGGTTCCTGGTTCGATAGTGAGGAGGTTTTTTGAGTTGGAGGAGTCAGTTGTTTTCAGATGGTTGTTAAAATTTGGAGGGTTTAAGGAAAGGTTGTTGGCTGATGATTTGTTCTTAACTAAGCTTGTTATGGAATGTGTTGTTGTCATCTTCACCAAGATATTGACTACTAGCTTGGTTATAGAGCTCAACCAAGCTTCATCAAAGGCAGCTGCAGAGTTGGAGAAGCGAAAAGAAAATTTCACAAAGGAGATGGATTTTGTTGTTGCTAATGTGGTAACAGGCATTGTAACAGGTTTTGTACTAGTTTGGTTTCCTGCTCCCACTGTTTCTCTTAAACCTCCTCCTGCAATTAGTGCTGGACTTATTGCCAAATTCTTCTATGGATGTCCTGAAAATGCTTTTCAAGTGGCTTTGGCAGGAACATCATACACACTTCTACAAAGAATAGGTGCTATAGTGCGTAACGGGGCAAAGCTGTTCGTAGTTGGAACCGGTGCTTCACTGGTTGGTATAGGTATAACAAATGCCTTGATCAATGCACAGAAGGCTGTAAATAAAGCATTTACTGTTGAGAATTTACCTGTAATCTCAACCAGTGTAGCATATGGTATTTACATGGTAGTAGTTAGCAACCTCAGATATCAAGTACTAGCAGGAATTATTGAGCAACGGATTCTGGAACCATTGCTACGCAAAAACAAACTTATACTAACTGGAGCATACTTTATTATTAGAACTGCTAATACTTATTGGGGATCACTACTGTGGGTGGATTTTGCAAGATGGGTTGGAGTCCAGAAGATAAAGGCTTAA

Protein sequence

>Msa0354490

MAMAMASFSNISTHLFSHHTHTQTNFYHCSHSSLPSYIITPRHEVSTFFSSKLNHSSASAPIFMPNHLLHSPVSTSSSAGNGGGFPGSGGGGGGDDGGGGEEEERDRNREEAMLVLAEAGRSMERFPADLAVAVKAGRVPGSIVRRFFELEESVVFRWLLKFGGFKERLLADDLFLTKLVMECVVVIFTKILTTSLVIELNQASSKAAAELEKRKENFTKEMDFVVANVVTGIVTGFVLVWFPAPTVSLKPPPAISAGLIAKFFYGCPENAFQVALAGTSYTLLQRIGAIVRNGAKLFVVGTGASLVGIGITNALINAQKAVNKAFTVENLPVISTSVAYGIYMVVVSNLRYQVLAGIIEQRILEPLLRKNKLILTGAYFIIRTANTYWGSLLWVDFARWVGVQKIKA*