AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0056130


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0056130 MtrunA17_Chr1g0148251 93.133 233 5 2 2 224 3 234 2.29e-156 432
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0056130 AT5G19940.1 58.650 237 81 4 3 223 2 237 9.03e-94 275
Msa0056130 AT5G19940.2 56.502 223 80 4 3 209 2 223 3.69e-83 247

Find 61 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGAAATGCCCTTTAATATT+TGG 0.156574 1_2:-11626157 Msa0056130:CDS
AGATTATAATTATTTAATTT+AGG 0.186486 1_2:-11623646 Msa0056130:three_prime_UTR
AATTCCTTTCATGAAAATTC+TGG 0.226261 1_2:-11623876 Msa0056130:three_prime_UTR
GATTATAATTATTTAATTTA+GGG 0.246927 1_2:-11623645 Msa0056130:three_prime_UTR
GATTCACCTCCAAATATTAA+AGG 0.263064 1_2:+11626148 None:intergenic
CATGATCCTAACTTCAATTC+AGG 0.271381 1_2:+11624031 None:intergenic
AAAATCGCATTTACTGCTTT+AGG 0.285729 1_2:-11625072 Msa0056130:intron
GAAACGGATGTTAAATGATT+TGG 0.301672 1_2:+11628222 None:intergenic
CAAAACAAAGGAAATGGTTC+AGG 0.305881 1_2:-11625124 Msa0056130:CDS
GAAAGAACTTGTTCACTGTT+TGG 0.307124 1_2:-11628370 Msa0056130:five_prime_UTR
AAAGAACTTGTTCACTGTTT+GGG 0.342121 1_2:-11628369 Msa0056130:five_prime_UTR
GAAGCGCCTGAATTGAAGTT+AGG 0.366884 1_2:-11624037 Msa0056130:CDS
AGAGAAGCTACGAGATCATT+AGG 0.383848 1_2:+11628130 None:intergenic
TTGTCTCAAAATGCACTAGT+AGG 0.397074 1_2:-11623739 Msa0056130:three_prime_UTR
AGAGGTGGCTGAAGTAGTTC+AGG 0.402001 1_2:-11626209 Msa0056130:CDS
GGTGGGTATCGGAGTGCATT+GGG 0.413827 1_2:-11625159 Msa0056130:CDS
TTTCATCTACATAAGTGATT+CGG 0.422972 1_2:+11623972 None:intergenic
ATGTTAAATGATTTGGATGT+TGG 0.431771 1_2:+11628229 None:intergenic
GGATCATGGAAAGGACAATA+TGG 0.440706 1_2:-11624016 Msa0056130:CDS
CGTAGCTTCTCTTCTTTCAA+AGG 0.466795 1_2:-11628119 Msa0056130:intron
ATTCACCTCCAAATATTAAA+GGG 0.468719 1_2:+11626149 None:intergenic
ATTCTGGCAAGTTTGTAACT+TGG 0.473722 1_2:-11623860 Msa0056130:three_prime_UTR
AGGTGGGTATCGGAGTGCAT+TGG 0.479445 1_2:-11625160 Msa0056130:CDS
AATATTAAAGGGCATTTCAC+CGG 0.488802 1_2:+11626160 None:intergenic
GCCAAGGGGTAATGATGTCT+TGG 0.494819 1_2:+11623770 None:intergenic
CAGCCAACATCCCCTGGAGG+TGG 0.497585 1_2:-11625177 Msa0056130:CDS
TCTAACACGGATGTCCGAAC+AGG 0.503886 1_2:-11628154 Msa0056130:CDS
CATCCCCTGGAGGTGGGTAT+CGG 0.509376 1_2:-11625170 Msa0056130:CDS
AAATGCCCTTTAATATTTGG+AGG 0.511861 1_2:-11626154 Msa0056130:intron
TCCAAGACATCATTACCCCT+TGG 0.513026 1_2:-11623771 Msa0056130:three_prime_UTR
TGTTCACAGCCAACATCCCC+TGG 0.520663 1_2:-11625183 Msa0056130:CDS
TGAGACAAACTCTGCAGCCA+AGG 0.525005 1_2:+11623754 None:intergenic
AATCAGGTGGTGCAAACAGA+TGG 0.526942 1_2:-11626262 Msa0056130:intron
TCAAAGCTCTAGATACTGAA+TGG 0.532008 1_2:-11624075 Msa0056130:CDS
CGAGATCATTAGGACCTGTT+CGG 0.533285 1_2:+11628140 None:intergenic
GCACTCCGATACCCACCTCC+AGG 0.533764 1_2:+11625165 None:intergenic
ATCCGTGTTAGAAATAGAAA+CGG 0.544064 1_2:+11628165 None:intergenic
CTGAATTGAAGTTAGGATCA+TGG 0.550366 1_2:-11624030 Msa0056130:CDS
TACCCACCTCCAGGGGATGT+TGG 0.554072 1_2:+11625174 None:intergenic
GTACAGTGAGCACACCCTCA+TGG 0.559008 1_2:-11628329 Msa0056130:exon
TTCCGTTTCTATTTCTAACA+CGG 0.559401 1_2:-11628167 Msa0056130:CDS
GAGACAAACTCTGCAGCCAA+GGG 0.565745 1_2:+11623755 None:intergenic
TGTCTCAAAATGCACTAGTA+GGG 0.574070 1_2:-11623738 Msa0056130:three_prime_UTR
AAGCATAAGCTGCAGCCATG+AGG 0.581398 1_2:+11628314 None:intergenic
CACTCCGATACCCACCTCCA+GGG 0.587739 1_2:+11625166 None:intergenic
AGCATAAGCTGCAGCCATGA+GGG 0.589302 1_2:+11628315 None:intergenic
TATTTAATTTAGGGAATGCG+AGG 0.615461 1_2:-11623636 Msa0056130:three_prime_UTR
AGGTTAGGATTGGGATCCAG+AGG 0.617399 1_2:-11623944 Msa0056130:CDS
AGCCAACATCCCCTGGAGGT+GGG 0.619542 1_2:-11625176 Msa0056130:CDS
TTGCTTTCCAGAGTGGGATG+TGG 0.621177 1_2:-11625211 Msa0056130:intron
CAGGTGGTGCAAACAGATGG+AGG 0.622209 1_2:-11626259 Msa0056130:CDS
GTTAGAAATAGAAACGGAAG+CGG 0.641989 1_2:+11628171 None:intergenic
GAAGTATTGTGTGAAAGAGC+CGG 0.642144 1_2:-11626179 Msa0056130:CDS
TTGAAGTTAGGATCATGGAA+AGG 0.658607 1_2:-11624025 Msa0056130:CDS
AAAGGAAGAACACAAAGAGG+TGG 0.660750 1_2:-11626224 Msa0056130:CDS
GCTATATTATAGTTACAAAG+TGG 0.667027 1_2:-11623714 Msa0056130:three_prime_UTR
GCAAAAGGAAGAACACAAAG+AGG 0.672287 1_2:-11626227 Msa0056130:CDS
ACTCCGATACCCACCTCCAG+GGG 0.688603 1_2:+11625167 None:intergenic
TCATGGAAAGGACAATATGG+AGG 0.694503 1_2:-11624013 Msa0056130:CDS
AGACAAACTCTGCAGCCAAG+GGG 0.701069 1_2:+11623756 None:intergenic
TCACAGCCAACATCCCCTGG+AGG 0.744676 1_2:-11625180 Msa0056130:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAATAAAAATAAAAAA+AGG + chr1_2:11627693-11627712 None:intergenic 0.0%
!! GAAAGTTATTATTATTATTA+TGG + chr1_2:11623693-11623712 None:intergenic 10.0%
!!! ATATTAACTAATTTTCTTAA+GGG + chr1_2:11624447-11624466 None:intergenic 10.0%
!! ATTAAATTAATCATCAAAAT+AGG - chr1_2:11624519-11624538 Msa0056130:intron 10.0%
!!! TTTTTATTTTACTTTACTAT+TGG - chr1_2:11624588-11624607 Msa0056130:intron 10.0%
!! AAATATTAAATGTAATGAAA+TGG + chr1_2:11625597-11625616 None:intergenic 10.0%
!! AATAAACTAAAAATAGTTTA+TGG - chr1_2:11626032-11626051 Msa0056130:intron 10.0%
!! TAATTTCTTTACAATTAAAA+AGG - chr1_2:11626382-11626401 Msa0056130:intron 10.0%
!!! TACTGTTTTTTAAATTATTT+TGG - chr1_2:11626632-11626651 Msa0056130:intron 10.0%
!!! ACTGTTTTTTAAATTATTTT+GGG - chr1_2:11626633-11626652 Msa0056130:intron 10.0%
!!! GATTTTAAGTATTTAATTAT+AGG - chr1_2:11627592-11627611 Msa0056130:intron 10.0%
!! AAGGAAATTATTACATTAAA+AGG + chr1_2:11624382-11624401 None:intergenic 15.0%
!!! AATGTAATAATTTCCTTTTT+TGG - chr1_2:11624385-11624404 Msa0056130:intron 15.0%
!!! CATATTAACTAATTTTCTTA+AGG + chr1_2:11624448-11624467 None:intergenic 15.0%
!!! TGATGTTTTAGAAAAATAAT+TGG - chr1_2:11625298-11625317 Msa0056130:intron 15.0%
!!! AAATAAAGATTTAAAAGTAC+AGG + chr1_2:11625631-11625650 None:intergenic 15.0%
!!! TTATATTACCTTTTATTTGT+TGG - chr1_2:11626216-11626235 Msa0056130:CDS 15.0%
!!! CTGTTTTTTAAATTATTTTG+GGG - chr1_2:11626634-11626653 Msa0056130:intron 15.0%
!!! ATTTCTGTTTTTTTTAATCA+AGG - chr1_2:11627067-11627086 Msa0056130:intron 15.0%
!!! TTGTATGAATTTTATACACA+CGG - chr1_2:11623922-11623941 Msa0056130:CDS 20.0%
!! AAGTCTAAGAATATTAGTAA+TGG - chr1_2:11624114-11624133 Msa0056130:intron 20.0%
!!! TTCCTAACATTTTCTTTTAT+AGG + chr1_2:11624975-11624994 None:intergenic 20.0%
!! ACTAAAATATTGTTTGTGAT+GGG - chr1_2:11625018-11625037 Msa0056130:intron 20.0%
!! TTGGAATCATGAAAATAAAA+TGG - chr1_2:11625317-11625336 Msa0056130:intron 20.0%
!! ATTAAATGTAATGAAATGGA+AGG + chr1_2:11625593-11625612 None:intergenic 20.0%
!!! GTAAAATTCAATTTTCAGTA+TGG + chr1_2:11625654-11625673 None:intergenic 20.0%
!!! TTGAATTTTACCTTTTAATC+AGG - chr1_2:11625663-11625682 Msa0056130:intron 20.0%
!!! TAAATTTTAACACAATCTCA+AGG + chr1_2:11625848-11625867 None:intergenic 20.0%
!! ACTTTATTAAATATGCAGAT+AGG + chr1_2:11625884-11625903 None:intergenic 20.0%
!! TTTATACATAAGCACTTATA+TGG + chr1_2:11625927-11625946 None:intergenic 20.0%
!! AATAGAAATTTGAAAAACAC+GGG + chr1_2:11626183-11626202 None:intergenic 20.0%
!! GAATAGAAATTTGAAAAACA+CGG + chr1_2:11626184-11626203 None:intergenic 20.0%
!! AATAACAATTAACAACAAAG+TGG - chr1_2:11626270-11626289 Msa0056130:intron 20.0%
!! TTACAATTAAAAAGGACATT+AGG - chr1_2:11626390-11626409 Msa0056130:intron 20.0%
!! TACAATTAAAAAGGACATTA+GGG - chr1_2:11626391-11626410 Msa0056130:intron 20.0%
!! ACCAATTAAACAATAAAATG+TGG + chr1_2:11626511-11626530 None:intergenic 20.0%
!!! TTTTTTCAAAACAAAGGAAA+TGG - chr1_2:11626811-11626830 Msa0056130:intron 20.0%
!!! TGTTTTTTTTAATCAAGGTT+GGG - chr1_2:11627072-11627091 Msa0056130:intron 20.0%
!!! TAAGCAAAAATCAACTTTTT+AGG - chr1_2:11627255-11627274 Msa0056130:intron 20.0%
!!! TAAGCAAAAATCAACTTTTT+AGG + chr1_2:11627255-11627274 None:intergenic 20.0%
!!! ACAAACATTTTACAAATTGA+AGG - chr1_2:11627655-11627674 Msa0056130:intron 20.0%
!! CATAGAAAAGCAATAAAAAA+GGG - chr1_2:11627760-11627779 Msa0056130:intron 20.0%
!!! TTTTTCGAAGAATATGAATT+TGG - chr1_2:11628031-11628050 Msa0056130:intron 20.0%
!! ATGTTAAATGATTTGGATGT+TGG + chr1_2:11623715-11623734 None:intergenic 25.0%
! TGATTATTCTTCTCTTTCAA+CGG - chr1_2:11623946-11623965 Msa0056130:CDS 25.0%
!!! ATATGCAAGTTGATTATCAA+TGG + chr1_2:11624069-11624088 None:intergenic 25.0%
! AATGTTAAAGTTGACTAAAG+AGG - chr1_2:11624160-11624179 Msa0056130:intron 25.0%
!!! ATAATTTCCTTTTTTGGCAT+CGG - chr1_2:11624391-11624410 Msa0056130:intron 25.0%
! GACCTATAAAAGAAAATGTT+AGG - chr1_2:11624970-11624989 Msa0056130:intron 25.0%
! AGATTTAGAAATTAATGAGC+TGG - chr1_2:11624995-11625014 Msa0056130:intron 25.0%
! GACTAAAATATTGTTTGTGA+TGG - chr1_2:11625017-11625036 Msa0056130:intron 25.0%
!! CACGTTATTTATTTCTTACA+CGG - chr1_2:11625257-11625276 Msa0056130:intron 25.0%
! TATATAGTAGTACTAAGCAA+TGG - chr1_2:11625395-11625414 Msa0056130:intron 25.0%
!! AATTTTACCTTTTAATCAGG+TGG - chr1_2:11625666-11625685 Msa0056130:intron 25.0%
! ATTCACCTCCAAATATTAAA+GGG + chr1_2:11625795-11625814 None:intergenic 25.0%
!!! TTATTTTGGTCTGTTTAGAT+TGG + chr1_2:11626135-11626154 None:intergenic 25.0%
! GAAAAATGCCAACAAATAAA+AGG + chr1_2:11626227-11626246 None:intergenic 25.0%
!! GCCACATTTTATTGTTTAAT+TGG - chr1_2:11626507-11626526 Msa0056130:intron 25.0%
!!! CAGAGTTTTTTTCAAAACAA+AGG - chr1_2:11626805-11626824 Msa0056130:intron 25.0%
!!! ATTTACTGCTTTAGGTTTTT+TGG - chr1_2:11626877-11626896 Msa0056130:intron 25.0%
! ATCATGTCAAATATGTATGA+TGG - chr1_2:11626937-11626956 Msa0056130:intron 25.0%
!!! CTGTTTTTTTTAATCAAGGT+TGG - chr1_2:11627071-11627090 Msa0056130:intron 25.0%
! GTTAGTTAGTAGTTAGTAAA+TGG - chr1_2:11627196-11627215 Msa0056130:intron 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG + chr1_2:11627354-11627373 None:intergenic 25.0%
! CATCCATTAAATGATGTATT+TGG - chr1_2:11627280-11627299 Msa0056130:intron 25.0%
! TGACCAAATACATCATTTAA+TGG + chr1_2:11627286-11627305 None:intergenic 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG - chr1_2:11627354-11627373 Msa0056130:intron 25.0%
! AGAATGTTATGTTTACATCA+AGG - chr1_2:11627395-11627414 Msa0056130:intron 25.0%
! GAATGTTATGTTTACATCAA+GGG - chr1_2:11627396-11627415 Msa0056130:intron 25.0%
! AATGTTATGTTTACATCAAG+GGG - chr1_2:11627397-11627416 Msa0056130:intron 25.0%
! AATTGTTACATGTTACTCTT+TGG - chr1_2:11627514-11627533 Msa0056130:intron 25.0%
! TTGAGTCTTAACTAACAAAT+TGG - chr1_2:11627545-11627564 Msa0056130:intron 25.0%
!!! CCTTTTTTATTGCTTTTCTA+TGG + chr1_2:11627762-11627781 None:intergenic 25.0%
! CCATAGAAAAGCAATAAAAA+AGG - chr1_2:11627759-11627778 Msa0056130:intron 25.0%
! CTTACTTGATGTATGAAAAT+GGG - chr1_2:11627831-11627850 Msa0056130:intron 25.0%
! TTTCATCTACATAAGTGATT+CGG + chr1_2:11627972-11627991 None:intergenic 25.0%
! CTTATGTAGATGAAAAAATC+AGG - chr1_2:11627977-11627996 Msa0056130:intron 25.0%
! AATTCCTTTCATGAAAATTC+TGG - chr1_2:11628065-11628084 Msa0056130:intron 25.0%
! GCTATATTATAGTTACAAAG+TGG - chr1_2:11628227-11628246 Msa0056130:CDS 25.0%
! AAAGAACTTGTTCACTGTTT+GGG - chr1_2:11623572-11623591 Msa0056130:three_prime_UTR 30.0%
GAAACGGATGTTAAATGATT+TGG + chr1_2:11623722-11623741 None:intergenic 30.0%
!!! AAACGCATAAGCTGTTTTTA+CGG + chr1_2:11623750-11623769 None:intergenic 30.0%
!! TTCCGTTTCTATTTCTAACA+CGG - chr1_2:11623774-11623793 Msa0056130:three_prime_UTR 30.0%
ATCCGTGTTAGAAATAGAAA+CGG + chr1_2:11623779-11623798 None:intergenic 30.0%
TTGTTGATCAGCTATTATCA+CGG + chr1_2:11624212-11624231 None:intergenic 30.0%
AAAACACCCAATTAAGAGAA+GGG - chr1_2:11624230-11624249 Msa0056130:intron 30.0%
CTTTGACCAAAAAAAGAGAA+GGG - chr1_2:11624258-11624277 Msa0056130:intron 30.0%
AATCATCAAAATAGGTGAAG+TGG - chr1_2:11624527-11624546 Msa0056130:intron 30.0%
ATCATCAAAATAGGTGAAGT+GGG - chr1_2:11624528-11624547 Msa0056130:intron 30.0%
TAAGACCAATGATGTTCTAT+GGG - chr1_2:11624682-11624701 Msa0056130:intron 30.0%
AATGAGAATACTTGAGAGTT+GGG - chr1_2:11624814-11624833 Msa0056130:intron 30.0%
CTCCTTACTACAAAATCTAT+GGG + chr1_2:11624906-11624925 None:intergenic 30.0%
TCTCCTTACTACAAAATCTA+TGG + chr1_2:11624907-11624926 None:intergenic 30.0%
! AACTTGGTTGTTGTTACTAT+TGG - chr1_2:11625090-11625109 Msa0056130:CDS 30.0%
TGTTGTTACTATTGGCATAA+TGG - chr1_2:11625098-11625117 Msa0056130:CDS 30.0%
TCAACCAATGCACAAATAAA+CGG - chr1_2:11625121-11625140 Msa0056130:CDS 30.0%
!! AATATTAAAGGGCATTTCAC+CGG + chr1_2:11625784-11625803 None:intergenic 30.0%
GTGAAATGCCCTTTAATATT+TGG - chr1_2:11625784-11625803 Msa0056130:intron 30.0%
AAATGCCCTTTAATATTTGG+AGG - chr1_2:11625787-11625806 Msa0056130:intron 30.0%
GATTCACCTCCAAATATTAA+AGG + chr1_2:11625796-11625815 None:intergenic 30.0%
TATTAAATATGCAGATAGGC+TGG + chr1_2:11625880-11625899 None:intergenic 30.0%
!!! GCTGTTTTTATAAGCAATTC+TGG - chr1_2:11625997-11626016 Msa0056130:intron 30.0%
AGACTATTTGATAGAGCTTA+CGG + chr1_2:11626076-11626095 None:intergenic 30.0%
!!! GTTGGCATTTTTCAAGAATT+TGG - chr1_2:11626234-11626253 Msa0056130:CDS 30.0%
! ATTGCACATTGTTTTCAACT+TGG + chr1_2:11626298-11626317 None:intergenic 30.0%
! TTTTGTCAGTATGTTGAACA+AGG + chr1_2:11626710-11626729 None:intergenic 30.0%
!! ATTTTGTTTCTCACAACATC+AGG + chr1_2:11626854-11626873 None:intergenic 30.0%
AAAATCGCATTTACTGCTTT+AGG - chr1_2:11626869-11626888 Msa0056130:intron 30.0%
AGTCTTAACTAACAAATTGG+AGG - chr1_2:11627548-11627567 Msa0056130:intron 30.0%
GCTTACTTGATGTATGAAAA+TGG - chr1_2:11627830-11627849 Msa0056130:intron 30.0%
GTAGATGAAAAAATCAGGTT+AGG - chr1_2:11627982-11628001 Msa0056130:intron 30.0%
TGAAAAAATCAGGTTAGGAT+TGG - chr1_2:11627987-11628006 Msa0056130:intron 30.0%
GAAAAAATCAGGTTAGGATT+GGG - chr1_2:11627988-11628007 Msa0056130:intron 30.0%
! TATTTAATTTAGGGAATGCG+AGG - chr1_2:11628305-11628324 Msa0056130:CDS 30.0%
! GAAAGAACTTGTTCACTGTT+TGG - chr1_2:11623571-11623590 Msa0056130:three_prime_UTR 35.0%
GTTAGAAATAGAAACGGAAG+CGG + chr1_2:11623773-11623792 None:intergenic 35.0%
! CGGTGTTGAACATTAATACA+AGG + chr1_2:11624192-11624211 None:intergenic 35.0%
CAAAACACCCAATTAAGAGA+AGG - chr1_2:11624229-11624248 Msa0056130:intron 35.0%
GCATTTCCCTTCTCTTAATT+GGG + chr1_2:11624239-11624258 None:intergenic 35.0%
AGCATTTCCCTTCTCTTAAT+TGG + chr1_2:11624240-11624259 None:intergenic 35.0%
GCTTTGACCAAAAAAAGAGA+AGG - chr1_2:11624257-11624276 Msa0056130:intron 35.0%
!!! GCATTTCCCTTCTCTTTTTT+TGG + chr1_2:11624267-11624286 None:intergenic 35.0%
TAATTGATTATGCCAGACTG+TGG - chr1_2:11624559-11624578 Msa0056130:intron 35.0%
TAAAAATTCACTCCACAGTC+TGG + chr1_2:11624574-11624593 None:intergenic 35.0%
AAAATACTGCTCAAGTCGAA+GGG - chr1_2:11624640-11624659 Msa0056130:intron 35.0%
GTAAGACCAATGATGTTCTA+TGG - chr1_2:11624681-11624700 Msa0056130:intron 35.0%
TCTATCCCATAGAACATCAT+TGG + chr1_2:11624690-11624709 None:intergenic 35.0%
!!! CGCTTATTTTATTCTCGTGT+TGG + chr1_2:11624731-11624750 None:intergenic 35.0%
GAATGAGAATACTTGAGAGT+TGG - chr1_2:11624813-11624832 Msa0056130:intron 35.0%
ATGAGAATACTTGAGAGTTG+GGG - chr1_2:11624815-11624834 Msa0056130:intron 35.0%
AGCACCTATAGTAGAAAAGA+TGG - chr1_2:11624839-11624858 Msa0056130:intron 35.0%
ACCTATAGTAGAAAAGATGG+TGG - chr1_2:11624842-11624861 Msa0056130:intron 35.0%
! TCCACCATCTTTTCTACTAT+AGG + chr1_2:11624846-11624865 None:intergenic 35.0%
!! AAAGATGGTGGAAAATAGAC+TGG - chr1_2:11624854-11624873 Msa0056130:intron 35.0%
!! AAGATGGTGGAAAATAGACT+GGG - chr1_2:11624855-11624874 Msa0056130:intron 35.0%
AAAATAGACTGGGATGGTTT+GGG - chr1_2:11624865-11624884 Msa0056130:intron 35.0%
! GACCCATAGATTTTGTAGTA+AGG - chr1_2:11624901-11624920 Msa0056130:intron 35.0%
! AGTAAGGAGAGTTGATTAGA+TGG - chr1_2:11624917-11624936 Msa0056130:intron 35.0%
GAGAATAGTTAGATCACTAG+AGG - chr1_2:11624939-11624958 Msa0056130:intron 35.0%
!!! AAGTTTTTTCCCACTAAGTG+GGG + chr1_2:11625075-11625094 None:intergenic 35.0%
!!! CAAGTTTTTTCCCACTAAGT+GGG + chr1_2:11625076-11625095 None:intergenic 35.0%
CAACCAATGCACAAATAAAC+GGG - chr1_2:11625122-11625141 Msa0056130:CDS 35.0%
AACCAATGCACAAATAAACG+GGG - chr1_2:11625123-11625142 Msa0056130:CDS 35.0%
! ACATCAGAGTATCCAAACAA+GGG + chr1_2:11625284-11625303 None:intergenic 35.0%
! AACATCAGAGTATCCAAACA+AGG + chr1_2:11625285-11625304 None:intergenic 35.0%
! TTTGAACAAGAGCACAAGAA+TGG - chr1_2:11625433-11625452 Msa0056130:intron 35.0%
!! GTTAGTCTTGCTATAAAGTC+TGG + chr1_2:11625512-11625531 None:intergenic 35.0%
GCACGAATAAATGCATAATG+TGG + chr1_2:11625818-11625837 None:intergenic 35.0%
!! AACAAATCAAAAGCACTACG+CGG + chr1_2:11626159-11626178 None:intergenic 35.0%
TCAAGAATTTGGCAATGAAC+AGG - chr1_2:11626245-11626264 Msa0056130:CDS 35.0%
TTTATCCATAGTGTAGTGCT+TGG - chr1_2:11626319-11626338 Msa0056130:intron 35.0%
TTATCCATAGTGTAGTGCTT+GGG - chr1_2:11626320-11626339 Msa0056130:intron 35.0%
! TGTCATTAAGCACTGTTATC+TGG - chr1_2:11626472-11626491 Msa0056130:intron 35.0%
ACATCCTGTGAATAGTTACT+TGG - chr1_2:11626547-11626566 Msa0056130:intron 35.0%
ACAAAATTGCTTTCCAGAGT+GGG - chr1_2:11626724-11626743 Msa0056130:intron 35.0%
CAAAACAAAGGAAATGGTTC+AGG - chr1_2:11626817-11626836 Msa0056130:intron 35.0%
!!! ACTGCTTTAGGTTTTTTGGA+TGG - chr1_2:11626881-11626900 Msa0056130:intron 35.0%
!!! TTTAGGTTTTTTGGATGGAG+AGG - chr1_2:11626886-11626905 Msa0056130:intron 35.0%
TCAAAGATACGAATTACGGT+GGG + chr1_2:11626966-11626985 None:intergenic 35.0%
! ATTGATGATCAGTCCCATAA+CGG + chr1_2:11627037-11627056 None:intergenic 35.0%
ACTGATCATCAATCATTAGC+TGG - chr1_2:11627044-11627063 Msa0056130:intron 35.0%
TTAATAGTATGTACTCCCTC+CGG - chr1_2:11627223-11627242 Msa0056130:intron 35.0%
!! CAATTTCTGAGACGAAAAAG+AGG + chr1_2:11627499-11627518 None:intergenic 35.0%
TTGAAATGTTAGCCAACAGA+AGG - chr1_2:11627622-11627641 Msa0056130:intron 35.0%
TGAAATGTTAGCCAACAGAA+GGG - chr1_2:11627623-11627642 Msa0056130:intron 35.0%
!! AGAGACTAACTTGTTCTTGT+TGG - chr1_2:11627716-11627735 Msa0056130:intron 35.0%
! GCTTTTCTATGGATAGAGAA+AGG + chr1_2:11627751-11627770 None:intergenic 35.0%
ATCAAGTAAGCACAGAAGTT+CGG + chr1_2:11627821-11627840 None:intergenic 35.0%
GATGTATGAAAATGGGAAAC+AGG - chr1_2:11627838-11627857 Msa0056130:intron 35.0%
!! TCAAAGCTCTAGATACTGAA+TGG - chr1_2:11627866-11627885 Msa0056130:intron 35.0%
CATGATCCTAACTTCAATTC+AGG + chr1_2:11627913-11627932 None:intergenic 35.0%
CTGAATTGAAGTTAGGATCA+TGG - chr1_2:11627911-11627930 Msa0056130:intron 35.0%
TTGAAGTTAGGATCATGGAA+AGG - chr1_2:11627916-11627935 Msa0056130:intron 35.0%
AAAAACAAACAGTGAACCTC+TGG + chr1_2:11628016-11628035 None:intergenic 35.0%
! CTTGCCAGAATTTTCATGAA+AGG + chr1_2:11628072-11628091 None:intergenic 35.0%
ATTCTGGCAAGTTTGTAACT+TGG - chr1_2:11628081-11628100 Msa0056130:intron 35.0%
TTGTCTCAAAATGCACTAGT+AGG - chr1_2:11628202-11628221 Msa0056130:CDS 35.0%
TGTCTCAAAATGCACTAGTA+GGG - chr1_2:11628203-11628222 Msa0056130:CDS 35.0%
!!! ATAAGCTGTTTTTACGGCGA+GGG + chr1_2:11623744-11623763 None:intergenic 40.0%
AGAGAAGCTACGAGATCATT+AGG + chr1_2:11623814-11623833 None:intergenic 40.0%
CGTAGCTTCTCTTCTTTCAA+AGG - chr1_2:11623822-11623841 Msa0056130:three_prime_UTR 40.0%
TGTATCACCAAAAACACCAG+AGG + chr1_2:11624621-11624640 None:intergenic 40.0%
CAAAATACTGCTCAAGTCGA+AGG - chr1_2:11624639-11624658 Msa0056130:intron 40.0%
!! ATCATTGGTCTTACTCTGTC+CGG + chr1_2:11624675-11624694 None:intergenic 40.0%
TGTTCTATGGGATAGAGTGT+TGG - chr1_2:11624694-11624713 Msa0056130:intron 40.0%
! GTTCTATGGGATAGAGTGTT+GGG - chr1_2:11624695-11624714 Msa0056130:intron 40.0%
CAAAGACGAAAATGTTGCGT+TGG - chr1_2:11624754-11624773 Msa0056130:intron 40.0%
GAAAATAGACTGGGATGGTT+TGG - chr1_2:11624864-11624883 Msa0056130:intron 40.0%
AGTTAGATCACTAGAGGTAG+AGG - chr1_2:11624945-11624964 Msa0056130:intron 40.0%
!!! CCAAGTTTTTTCCCACTAAG+TGG + chr1_2:11625077-11625096 None:intergenic 40.0%
CCACTTAGTGGGAAAAAACT+TGG - chr1_2:11625074-11625093 Msa0056130:CDS 40.0%
AATGCACAAATAAACGGGGA+GGG - chr1_2:11625127-11625146 Msa0056130:CDS 40.0%
TAGTAGTGGTTAGCACTACT+GGG + chr1_2:11625198-11625217 None:intergenic 40.0%
TGCTAACCACTACTACAACA+CGG - chr1_2:11625203-11625222 Msa0056130:CDS 40.0%
GTTTGCACCACCTGATTAAA+AGG + chr1_2:11625676-11625695 None:intergenic 40.0%
! TGGAGGAGTTTTACTGCAAA+AGG - chr1_2:11625699-11625718 Msa0056130:intron 40.0%
GCAAAAGGAAGAACACAAAG+AGG - chr1_2:11625714-11625733 Msa0056130:intron 40.0%
AAAGGAAGAACACAAAGAGG+TGG - chr1_2:11625717-11625736 Msa0056130:intron 40.0%
!! GAAGTATTGTGTGAAAGAGC+CGG - chr1_2:11625762-11625781 Msa0056130:intron 40.0%
AATATGCAGATAGGCTGGTA+GGG + chr1_2:11625875-11625894 None:intergenic 40.0%
AAATATGCAGATAGGCTGGT+AGG + chr1_2:11625876-11625895 None:intergenic 40.0%
ACGTCCTTATGCTAGTAGAT+AGG - chr1_2:11626099-11626118 Msa0056130:intron 40.0%
TGAGCCTATCTACTAGCATA+AGG + chr1_2:11626106-11626125 None:intergenic 40.0%
! AAGCACTACGCGGTTTATTT+TGG + chr1_2:11626149-11626168 None:intergenic 40.0%
TTTACCCAAGCACTACACTA+TGG + chr1_2:11626327-11626346 None:intergenic 40.0%
TAGGCCAAGTAACTATTCAC+AGG + chr1_2:11626554-11626573 None:intergenic 40.0%
TTACTTGGCCTAGTAATCTG+TGG - chr1_2:11626562-11626581 Msa0056130:intron 40.0%
AGCCAAAACCACAGATTACT+AGG + chr1_2:11626573-11626592 None:intergenic 40.0%
GACAAAATTGCTTTCCAGAG+TGG - chr1_2:11626723-11626742 Msa0056130:intron 40.0%
GATGGAGAGGTTTCTCTAAA+AGG - chr1_2:11626899-11626918 Msa0056130:intron 40.0%
GTCAAAGATACGAATTACGG+TGG + chr1_2:11626967-11626986 None:intergenic 40.0%
GGGGTCAAAGATACGAATTA+CGG + chr1_2:11626970-11626989 None:intergenic 40.0%
! TTGATGATCAGTCCCATAAC+GGG + chr1_2:11627036-11627055 None:intergenic 40.0%
! AAACTCGGGTTCTTTTCCTA+GGG - chr1_2:11627125-11627144 Msa0056130:intron 40.0%
TCTCCAACCAACATGTTGTT+GGG + chr1_2:11627172-11627191 None:intergenic 40.0%
ATCTCCAACCAACATGTTGT+TGG + chr1_2:11627173-11627192 None:intergenic 40.0%
! CAACATGTTGGTTGGAGATA+TGG - chr1_2:11627174-11627193 Msa0056130:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG + chr1_2:11627358-11627377 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr1_2:11627357-11627376 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr1_2:11627357-11627376 Msa0056130:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG - chr1_2:11627358-11627377 Msa0056130:intron 40.0%
TCATTACATAGTACTCCCTC+CGG + chr1_2:11627376-11627395 None:intergenic 40.0%
!! GTCATTTTAGTCCCTTCTGT+TGG + chr1_2:11627637-11627656 None:intergenic 40.0%
GGATCATGGAAAGGACAATA+TGG - chr1_2:11627925-11627944 Msa0056130:intron 40.0%
TCATGGAAAGGACAATATGG+AGG - chr1_2:11627928-11627947 Msa0056130:intron 40.0%
!! TGTTTTTACGGCGAGGGAAA+CGG + chr1_2:11623738-11623757 None:intergenic 45.0%
!!! CATAAGCTGTTTTTACGGCG+AGG + chr1_2:11623745-11623764 None:intergenic 45.0%
CGAGATCATTAGGACCTGTT+CGG + chr1_2:11623804-11623823 None:intergenic 45.0%
AGAGAAGGGAAATGCTAACC+TGG - chr1_2:11624272-11624291 Msa0056130:intron 45.0%
!! TTTTTCAACACCAGTGCTCC+AGG + chr1_2:11624293-11624312 None:intergenic 45.0%
!! TGGAGCACTGGTGTTGAAAA+AGG - chr1_2:11624292-11624311 Msa0056130:intron 45.0%
TACTATTGGCGTAATGCCTC+TGG - chr1_2:11624602-11624621 Msa0056130:intron 45.0%
! CGTAATGCCTCTGGTGTTTT+TGG - chr1_2:11624611-11624630 Msa0056130:intron 45.0%
! AGTCGAAGGGTCAATTTTGC+CGG - chr1_2:11624653-11624672 Msa0056130:intron 45.0%
TGGTGGAAAATAGACTGGGA+TGG - chr1_2:11624859-11624878 Msa0056130:intron 45.0%
ACTAAGTGGGGTTGACTACA+TGG + chr1_2:11625063-11625082 None:intergenic 45.0%
ATGTAGTCAACCCCACTTAG+TGG - chr1_2:11625062-11625081 Msa0056130:intron 45.0%
TGTAGTCAACCCCACTTAGT+GGG - chr1_2:11625063-11625082 Msa0056130:intron 45.0%
CTCCCCGTTTATTTGTGCAT+TGG + chr1_2:11625128-11625147 None:intergenic 45.0%
CAATGCACAAATAAACGGGG+AGG - chr1_2:11625126-11625145 Msa0056130:CDS 45.0%
ATGCACAAATAAACGGGGAG+GGG - chr1_2:11625128-11625147 Msa0056130:CDS 45.0%
GTAGTAGTGGTTAGCACTAC+TGG + chr1_2:11625199-11625218 None:intergenic 45.0%
GCTAACCACTACTACAACAC+GGG - chr1_2:11625204-11625223 Msa0056130:intron 45.0%
CTAACCACTACTACAACACG+GGG - chr1_2:11625205-11625224 Msa0056130:intron 45.0%
TAACCACTACTACAACACGG+GGG - chr1_2:11625206-11625225 Msa0056130:intron 45.0%
TTCTTACACGGTCCCTTGTT+TGG - chr1_2:11625269-11625288 Msa0056130:intron 45.0%
AATCAGGTGGTGCAAACAGA+TGG - chr1_2:11625679-11625698 Msa0056130:intron 45.0%
ATATGCAGATAGGCTGGTAG+GGG + chr1_2:11625874-11625893 None:intergenic 45.0%
TACATCATGCAGAGCATGTG+TGG + chr1_2:11626422-11626441 None:intergenic 45.0%
! GGCCTAGTAATCTGTGGTTT+TGG - chr1_2:11626568-11626587 Msa0056130:intron 45.0%
TCGTATCTTTGACCCCCATT+AGG - chr1_2:11626974-11626993 Msa0056130:intron 45.0%
! ACTGCTAGAGTCGTCCTTTT+GGG + chr1_2:11627104-11627123 None:intergenic 45.0%
ACGACTCTAGCAGTCAAACT+CGG - chr1_2:11627110-11627129 Msa0056130:intron 45.0%
! CAAACTCGGGTTCTTTTCCT+AGG - chr1_2:11627124-11627143 Msa0056130:intron 45.0%
! AACTCGGGTTCTTTTCCTAG+GGG - chr1_2:11627126-11627145 Msa0056130:intron 45.0%
TGACAATATGACTCTCCCCT+AGG + chr1_2:11627144-11627163 None:intergenic 45.0%
CAACTCTCCCAACAACATGT+TGG - chr1_2:11627162-11627181 Msa0056130:intron 45.0%
TCTCCCAACAACATGTTGGT+TGG - chr1_2:11627166-11627185 Msa0056130:intron 45.0%
! GAAGCGCCTGAATTGAAGTT+AGG - chr1_2:11627904-11627923 Msa0056130:intron 45.0%
TCCAAGACATCATTACCCCT+TGG - chr1_2:11628170-11628189 Msa0056130:CDS 45.0%
!!! ATTTTAAGTATTTAATTATA+GGG - chr1_2:11627593-11627612 Msa0056130:intron 5.0%
!!! AGATTATAATTATTTAATTT+AGG - chr1_2:11628295-11628314 Msa0056130:CDS 5.0%
!!! GATTATAATTATTTAATTTA+GGG - chr1_2:11628296-11628315 Msa0056130:CDS 5.0%
AGCATAAGCTGCAGCCATGA+GGG + chr1_2:11623629-11623648 None:intergenic 50.0%
AAGCATAAGCTGCAGCCATG+AGG + chr1_2:11623630-11623649 None:intergenic 50.0%
TCTAACACGGATGTCCGAAC+AGG - chr1_2:11623787-11623806 Msa0056130:three_prime_UTR 50.0%
GAAATGCTAACCTGGAGCAC+TGG - chr1_2:11624280-11624299 Msa0056130:intron 50.0%
!! CTATGGGATAGAGTGTTGGG+CGG - chr1_2:11624698-11624717 Msa0056130:intron 50.0%
TGCACAAATAAACGGGGAGG+GGG - chr1_2:11625129-11625148 Msa0056130:CDS 50.0%
!! GGACATGAGCATTGGTGTGT+GGG + chr1_2:11625177-11625196 None:intergenic 50.0%
CACTACTGGGACATGAGCAT+TGG + chr1_2:11625185-11625204 None:intergenic 50.0%
AGAGGTGGCTGAAGTAGTTC+AGG - chr1_2:11625732-11625751 Msa0056130:intron 50.0%
TTGCTTTCCAGAGTGGGATG+TGG - chr1_2:11626730-11626749 Msa0056130:intron 50.0%
ATACCTTCGGACGCCTAATG+GGG + chr1_2:11626990-11627009 None:intergenic 50.0%
GATACCTTCGGACGCCTAAT+GGG + chr1_2:11626991-11627010 None:intergenic 50.0%
GTAAGCCATGGGGATACCTT+CGG + chr1_2:11627003-11627022 None:intergenic 50.0%
AGGTTGGGATACCTCCCAAA+AGG - chr1_2:11627087-11627106 Msa0056130:intron 50.0%
! GACTGCTAGAGTCGTCCTTT+TGG + chr1_2:11627105-11627124 None:intergenic 50.0%
CGACTCTAGCAGTCAAACTC+GGG - chr1_2:11627111-11627130 Msa0056130:intron 50.0%
AGGTTAGGATTGGGATCCAG+AGG - chr1_2:11627997-11628016 Msa0056130:intron 50.0%
GCCAAGGGGTAATGATGTCT+TGG + chr1_2:11628174-11628193 None:intergenic 50.0%
AGACAAACTCTGCAGCCAAG+GGG + chr1_2:11628188-11628207 None:intergenic 50.0%
GAGACAAACTCTGCAGCCAA+GGG + chr1_2:11628189-11628208 None:intergenic 50.0%
TGAGACAAACTCTGCAGCCA+AGG + chr1_2:11628190-11628209 None:intergenic 50.0%
GTACAGTGAGCACACCCTCA+TGG - chr1_2:11623612-11623631 Msa0056130:three_prime_UTR 55.0%
!!! CCTTTTTTGGCATCGGTGCC+CGG - chr1_2:11624398-11624417 Msa0056130:intron 55.0%
!!! CTTTTTTGGCATCGGTGCCC+GGG - chr1_2:11624399-11624418 Msa0056130:intron 55.0%
!!! TTTTTTGGCATCGGTGCCCG+GGG - chr1_2:11624400-11624419 Msa0056130:intron 55.0%
CAAATAAACGGGGAGGGGGA+AGG - chr1_2:11625133-11625152 Msa0056130:CDS 55.0%
!! GGGACATGAGCATTGGTGTG+TGG + chr1_2:11625178-11625197 None:intergenic 55.0%
AACACGGGGGACGATGACTA+TGG - chr1_2:11625219-11625238 Msa0056130:intron 55.0%
CAGGTGGTGCAAACAGATGG+AGG - chr1_2:11625682-11625701 Msa0056130:intron 55.0%
CAGTACACCACATCCCACTC+TGG + chr1_2:11626740-11626759 None:intergenic 55.0%
TGTTCACAGCCAACATCCCC+TGG - chr1_2:11626758-11626777 Msa0056130:intron 55.0%
!! AGGTGGGTATCGGAGTGCAT+TGG - chr1_2:11626781-11626800 Msa0056130:intron 55.0%
!! GGTGGGTATCGGAGTGCATT+GGG - chr1_2:11626782-11626801 Msa0056130:intron 55.0%
TACCTTCGGACGCCTAATGG+GGG + chr1_2:11626989-11627008 None:intergenic 55.0%
GGATACCTTCGGACGCCTAA+TGG + chr1_2:11626992-11627011 None:intergenic 55.0%
TCCAGAGGGAGTAAGCCATG+GGG + chr1_2:11627013-11627032 None:intergenic 55.0%
GTCCAGAGGGAGTAAGCCAT+GGG + chr1_2:11627014-11627033 None:intergenic 55.0%
TACTCCCTCTGGACCCGTTA+TGG - chr1_2:11627020-11627039 Msa0056130:intron 55.0%
ACTCCCTCTGGACCCGTTAT+GGG - chr1_2:11627021-11627040 Msa0056130:intron 55.0%
!! AGTCCCATAACGGGTCCAGA+GGG + chr1_2:11627027-11627046 None:intergenic 55.0%
! GCTAGAGTCGTCCTTTTGGG+AGG + chr1_2:11627101-11627120 None:intergenic 55.0%
!! CCGGGCACCGATGCCAAAAA+AGG + chr1_2:11624401-11624420 None:intergenic 60.0%
AGGGTCATGCTAACCGCCAG+CGG + chr1_2:11624428-11624447 None:intergenic 60.0%
ATAAACGGGGAGGGGGAAGG+AGG - chr1_2:11625136-11625155 Msa0056130:CDS 60.0%
! GAGGGGGAAGGAGGTGTAGT+GGG - chr1_2:11625145-11625164 Msa0056130:CDS 60.0%
CGTCCCCCGTGTTGTAGTAG+TGG + chr1_2:11625212-11625231 None:intergenic 60.0%
TCACAGCCAACATCCCCTGG+AGG - chr1_2:11626761-11626780 Msa0056130:intron 60.0%
AGCCAACATCCCCTGGAGGT+GGG - chr1_2:11626765-11626784 Msa0056130:intron 60.0%
TACCCACCTCCAGGGGATGT+TGG + chr1_2:11626770-11626789 None:intergenic 60.0%
CATCCCCTGGAGGTGGGTAT+CGG - chr1_2:11626771-11626790 Msa0056130:intron 60.0%
ACTCCGATACCCACCTCCAG+GGG + chr1_2:11626777-11626796 None:intergenic 60.0%
CACTCCGATACCCACCTCCA+GGG + chr1_2:11626778-11626797 None:intergenic 60.0%
TCCCCATGGCTTACTCCCTC+TGG - chr1_2:11627009-11627028 Msa0056130:intron 60.0%
GGTCCAGAGGGAGTAAGCCA+TGG + chr1_2:11627015-11627034 None:intergenic 60.0%
!! CAGTCCCATAACGGGTCCAG+AGG + chr1_2:11627028-11627047 None:intergenic 60.0%
! GGAGGGGGAAGGAGGTGTAG+TGG - chr1_2:11625144-11625163 Msa0056130:CDS 65.0%
CAGCCAACATCCCCTGGAGG+TGG - chr1_2:11626764-11626783 Msa0056130:intron 65.0%
GCACTCCGATACCCACCTCC+AGG + chr1_2:11626779-11626798 None:intergenic 65.0%
GACCCCCATTAGGCGTCCGA+AGG - chr1_2:11626984-11627003 Msa0056130:intron 65.0%
!! GGCGTCCGAAGGTATCCCCA+TGG - chr1_2:11626995-11627014 Msa0056130:intron 65.0%
CTAACCGCCAGCGGTGCCCC+GGG + chr1_2:11624419-11624438 None:intergenic 75.0%
GCTAACCGCCAGCGGTGCCC+CGG + chr1_2:11624420-11624439 None:intergenic 75.0%
!!! ATCGGTGCCCGGGGCACCGC+TGG - chr1_2:11624409-11624428 Msa0056130:intron 80.0%
!!! GGTGCCCGGGGCACCGCTGG+CGG - chr1_2:11624412-11624431 Msa0056130:intron 85.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 11623561 11628402 11623561 ID=Msa0056130;Name=Msa0056130
chr1_2 mRNA 11623561 11628402 11623561 ID=Msa0056130-mRNA-1;Parent=Msa0056130;Name=Msa0056130-mRNA-1;_AED=0.02;_eAED=0.02;_QI=70|0.66|0.75|1|1|1|4|355|224
chr1_2 exon 11623561 11624103 11623561 ID=Msa0056130-mRNA-1:exon:4457;Parent=Msa0056130-mRNA-1
chr1_2 exon 11625073 11625222 11625073 ID=Msa0056130-mRNA-1:exon:4456;Parent=Msa0056130-mRNA-1
chr1_2 exon 11626155 11626278 11626155 ID=Msa0056130-mRNA-1:exon:4455;Parent=Msa0056130-mRNA-1
chr1_2 exon 11628120 11628402 11628120 ID=Msa0056130-mRNA-1:exon:4454;Parent=Msa0056130-mRNA-1
chr1_2 five_prime_UTR 11628333 11628402 11628333 ID=Msa0056130-mRNA-1:five_prime_utr;Parent=Msa0056130-mRNA-1
chr1_2 CDS 11628120 11628332 11628120 ID=Msa0056130-mRNA-1:cds;Parent=Msa0056130-mRNA-1
chr1_2 CDS 11626155 11626278 11626155 ID=Msa0056130-mRNA-1:cds;Parent=Msa0056130-mRNA-1
chr1_2 CDS 11625073 11625222 11625073 ID=Msa0056130-mRNA-1:cds;Parent=Msa0056130-mRNA-1
chr1_2 CDS 11623916 11624103 11623916 ID=Msa0056130-mRNA-1:cds;Parent=Msa0056130-mRNA-1
chr1_2 three_prime_UTR 11623561 11623915 11623561 ID=Msa0056130-mRNA-1:three_prime_utr;Parent=Msa0056130-mRNA-1
Gene Sequence

>Msa0056130

ATGGCTGCAGCTTATGCTTCTGCGTTTCGCTTAGTACAATCTTCATTCGAATTCAGAAGCCATAATAATAATAATAACTTTCCAACATCCAAATCATTTAACATCCGTTTCCCTCGCCGTAAAAACAGCTTATGCGTTTCCGCTTCCGTTTCTATTTCTAACACGGATGTCCGAACAGGTCCTAATGATCTCGTAGCTTCTCTTCTTTCAAAGGTGGTGCAAACAGATGGAGGAGTTTTACTGCAAAAGGAAGAACACAAAGAGGTGGCTGAAGTAGTTCAGGAATTGCAGAAGTATTGTGTGAAAGAGCCGGTGAAATGCCCTTTAATATTTGGAGAGTGGGATGTGGTGTACTGTTCACAGCCAACATCCCCTGGAGGTGGGTATCGGAGTGCATTGGGCAGAGTTTTTTTCAAAACAAAGGAAATGGTTCAGGTTGTTGAAGCTCCTGATGTTGTGAGAAACAAAATCGCATTTACTGCTTTAGGAACACTCAAAGCTCTAGATACTGAATGGATTCAAGTTGTATTTGAAGCGCCTGAATTGAAGTTAGGATCATGGAAAGGACAATATGGAGGTCAGAGTGAAGTTAAACTCCGAATCACTTATGTAGATGAAAAAATCAGGTTAGGATTGGGATCCAGAGGTTCACTGTTTGTTTTTCGAAGAATATGA

Protein sequence

>Msa0056130

MAAAYASAFRLVQSSFEFRSHNNNNNFPTSKSFNIRFPRRKNSLCVSASVSISNTDVRTGPNDLVASLLSKVVQTDGGVLLQKEEHKEVAEVVQELQKYCVKEPVKCPLIFGEWDVVYCSQPTSPGGGYRSALGRVFFKTKEMVQVVEAPDVVRNKIAFTALGTLKALDTEWIQVVFEAPELKLGSWKGQYGGQSEVKLRITYVDEKIRLGLGSRGSLFVFRRI*