AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1344430


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1344430 MtrunA17_Chr1g0207001 98.485 132 1 1 1 132 1 131 1.12e-92 263
Msa1344430 MtrunA17_Chr3g0079331 93.939 132 7 1 1 132 1 131 8.39e-88 251
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1344430 AT1G49975.1 62.687 134 43 3 1 132 1 129 6.14e-51 158

Find 46 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACATGTTCATTATCCTTT+AGG 0.222495 tig0006807:+49206 Msa1344430:five_prime_UTR
AGCACCACCAACATGGAATT+TGG 0.289275 tig0006807:+49379 Msa1344430:CDS
GAAGAGGCGATGAGTTCTAT+AGG 0.348824 tig0006807:+49256 Msa1344430:exon
GATTACTTTGAGTTCGTAGA+AGG 0.353863 tig0006807:+49891 Msa1344430:CDS
TATAGGGCAAACCATGTTAA+TGG 0.362210 tig0006807:+49273 Msa1344430:CDS
TCTGTTGGGAAATTCGGATA+TGG 0.383992 tig0006807:+50061 Msa1344430:three_prime_UTR
ATGGTCAACTAAAGAAGATT+AGG 0.393112 tig0006807:+50173 Msa1344430:three_prime_UTR
GCTTAATAAACTTATCCTAA+AGG 0.408244 tig0006807:-49221 Msa1344440:three_prime_UTR
CAGAAAAGGGTATCCTTGAT+TGG 0.408398 tig0006807:+49952 Msa1344430:CDS
TTTGCCTAGTAAAATATGTA+TGG 0.415432 tig0006807:+50154 Msa1344430:three_prime_UTR
AGGGTCTTGCGTTGCGGTTG+CGG 0.425612 tig0006807:-49434 Msa1344440:three_prime_UTR
GAAGCTTTCAGAAGCAGAAA+AGG 0.433331 tig0006807:+49938 Msa1344430:CDS
CCTTCCAAATTCCATGTTGG+TGG 0.438290 tig0006807:-49383 Msa1344440:three_prime_UTR
TTGGTGGTGCTTCTCAAAGT+TGG 0.441638 tig0006807:-49367 Msa1344440:three_prime_UTR
GTTTGCAAGGAAAGGAAGAG+GGG 0.447267 tig0006807:+49916 Msa1344430:CDS
TGGTGGTGCTTCTCAAAGTT+GGG 0.449042 tig0006807:-49366 Msa1344440:three_prime_UTR
GGGTTTGCAAGGAAAGGAAG+AGG 0.455002 tig0006807:+49914 Msa1344430:CDS
CATATGAAGCACAATGTAGT+AGG 0.466639 tig0006807:+49180 None:intergenic
TGTTAGCTTTAAGCCAATCA+AGG 0.469309 tig0006807:-49965 Msa1344440:intron
AAGAGGCGATGAGTTCTATA+GGG 0.479187 tig0006807:+49257 Msa1344430:exon
AGAAGCAATGTCCTTGACTC+AGG 0.482163 tig0006807:-49454 Msa1344440:three_prime_UTR
GGTTTGCAAGGAAAGGAAGA+GGG 0.496880 tig0006807:+49915 Msa1344430:CDS
TAGATTACCAAATAGAAAAG+AGG 0.499650 tig0006807:+50124 Msa1344430:three_prime_UTR
TTATTACAAGCGTAATTACA+AGG 0.507139 tig0006807:+49869 Msa1344430:CDS
GGTACAGTTTCTTTCTTGCA+AGG 0.512639 tig0006807:+50082 Msa1344430:three_prime_UTR
TCTCCTTCCAAATTCCATGT+TGG 0.526459 tig0006807:-49386 Msa1344440:three_prime_UTR
GTTAATGGCACTAACAGTTA+CGG 0.549686 tig0006807:+49288 Msa1344430:CDS
AACTGTTAGTGCCATTAACA+TGG 0.549756 tig0006807:-49284 Msa1344440:three_prime_UTR
GTATGCATCATCCAATGTGC+AGG 0.549946 tig0006807:+49318 Msa1344430:CDS
TGACTCAGGGTCTTGCGTTG+CGG 0.557938 tig0006807:-49440 Msa1344440:three_prime_UTR
TACTTTGAGTTCGTAGAAGG+GGG 0.574786 tig0006807:+49894 Msa1344430:CDS
AACATGGAATTTGGAAGGAG+AGG 0.586422 tig0006807:+49388 Msa1344430:CDS
ATTATGAACTGCCTGCACAT+TGG 0.588435 tig0006807:-49329 Msa1344440:three_prime_UTR
AGATTACCAAATAGAAAAGA+GGG 0.588795 tig0006807:+50125 Msa1344430:three_prime_UTR
ATTACTTTGAGTTCGTAGAA+GGG 0.593520 tig0006807:+49892 Msa1344430:CDS
AAGCTTTCAGAAGCAGAAAA+GGG 0.600223 tig0006807:+49939 Msa1344430:CDS
GAAGAAAACAGAGGAAAACA+AGG 0.601206 tig0006807:+49740 Msa1344430:CDS
TTACTTTGAGTTCGTAGAAG+GGG 0.603502 tig0006807:+49893 Msa1344430:CDS
TACCAAATAGAAAAGAGGGA+TGG 0.606414 tig0006807:+50129 Msa1344430:three_prime_UTR
CCTAAAGGATAATGAACATG+TGG 0.616421 tig0006807:-49206 None:intergenic
GAAGCAATGTCCTTGACTCA+GGG 0.617035 tig0006807:-49453 Msa1344440:three_prime_UTR
CCACCAACATGGAATTTGGA+AGG 0.619705 tig0006807:+49383 Msa1344430:CDS
CAACGCAAGACCCTGAGTCA+AGG 0.623179 tig0006807:+49443 Msa1344430:CDS
TTTGAGAAGCACCACCAACA+TGG 0.627251 tig0006807:+49372 Msa1344430:CDS
TGCGGTTGCGGCAATAACAG+TGG 0.633822 tig0006807:-49422 Msa1344440:three_prime_UTR
AGAATATTTGAAGAAAACAG+AGG 0.670181 tig0006807:+49731 Msa1344430:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATCAAAATTTACAAGCT+AGG - tig0006807:50042-50061 Msa1344440:intron 20.0%
!!! TGTAAATTTTGATTTTCTGT+TGG + tig0006807:50046-50065 Msa1344430:three_prime_UTR 20.0%
!!! GTAAATTTTGATTTTCTGTT+GGG + tig0006807:50047-50066 Msa1344430:three_prime_UTR 20.0%
!! AAAATCAAAATTTACAAGCT+AGG - tig0006807:50042-50061 Msa1344440:intron 20.0%
!!! TGTAAATTTTGATTTTCTGT+TGG + tig0006807:50046-50065 Msa1344430:three_prime_UTR 20.0%
!!! GTAAATTTTGATTTTCTGTT+GGG + tig0006807:50047-50066 Msa1344430:three_prime_UTR 20.0%
! GCTTAATAAACTTATCCTAA+AGG - tig0006807:49224-49243 Msa1344440:three_prime_UTR 25.0%
! AGAATATTTGAAGAAAACAG+AGG + tig0006807:49731-49750 Msa1344430:intron 25.0%
! TTATTACAAGCGTAATTACA+AGG + tig0006807:49869-49888 Msa1344430:CDS 25.0%
! TAGATTACCAAATAGAAAAG+AGG + tig0006807:50124-50143 Msa1344430:three_prime_UTR 25.0%
! AGATTACCAAATAGAAAAGA+GGG + tig0006807:50125-50144 Msa1344430:three_prime_UTR 25.0%
! TTTGCCTAGTAAAATATGTA+TGG + tig0006807:50154-50173 Msa1344430:three_prime_UTR 25.0%
!! TTGACCATACATATTTTACT+AGG - tig0006807:50161-50180 Msa1344440:intron 25.0%
! GCTTAATAAACTTATCCTAA+AGG - tig0006807:49224-49243 Msa1344440:three_prime_UTR 25.0%
! AGAATATTTGAAGAAAACAG+AGG + tig0006807:49731-49750 Msa1344430:intron 25.0%
! TTATTACAAGCGTAATTACA+AGG + tig0006807:49869-49888 Msa1344430:CDS 25.0%
! TAGATTACCAAATAGAAAAG+AGG + tig0006807:50124-50143 Msa1344430:three_prime_UTR 25.0%
! AGATTACCAAATAGAAAAGA+GGG + tig0006807:50125-50144 Msa1344430:three_prime_UTR 25.0%
! TTTGCCTAGTAAAATATGTA+TGG + tig0006807:50154-50173 Msa1344430:three_prime_UTR 25.0%
!! TTGACCATACATATTTTACT+AGG - tig0006807:50161-50180 Msa1344440:intron 25.0%
AAGCAAACTAAAAAGAGAAG+AGG + tig0006807:49240-49259 Msa1344430:five_prime_UTR 30.0%
AAAATGACAAAGAGGTAAGT+AGG + tig0006807:49766-49785 Msa1344430:intron 30.0%
AAATGACAAAGAGGTAAGTA+GGG + tig0006807:49767-49786 Msa1344430:intron 30.0%
!! TTTAATCACAGTTTTGTGTG+TGG + tig0006807:49832-49851 Msa1344430:intron 30.0%
! ATTACTTTGAGTTCGTAGAA+GGG + tig0006807:49892-49911 Msa1344430:CDS 30.0%
ATCAAAATTTACAAGCTAGG+TGG - tig0006807:50039-50058 Msa1344440:intron 30.0%
! TGATTTTCTGTTGGGAAATT+CGG + tig0006807:50055-50074 Msa1344430:three_prime_UTR 30.0%
ATGGTCAACTAAAGAAGATT+AGG + tig0006807:50173-50192 Msa1344430:three_prime_UTR 30.0%
AAGCAAACTAAAAAGAGAAG+AGG + tig0006807:49240-49259 Msa1344430:five_prime_UTR 30.0%
AAAATGACAAAGAGGTAAGT+AGG + tig0006807:49766-49785 Msa1344430:intron 30.0%
AAATGACAAAGAGGTAAGTA+GGG + tig0006807:49767-49786 Msa1344430:intron 30.0%
!! TTTAATCACAGTTTTGTGTG+TGG + tig0006807:49832-49851 Msa1344430:intron 30.0%
! ATTACTTTGAGTTCGTAGAA+GGG + tig0006807:49892-49911 Msa1344430:CDS 30.0%
ATCAAAATTTACAAGCTAGG+TGG - tig0006807:50039-50058 Msa1344440:intron 30.0%
! TGATTTTCTGTTGGGAAATT+CGG + tig0006807:50055-50074 Msa1344430:three_prime_UTR 30.0%
ATGGTCAACTAAAGAAGATT+AGG + tig0006807:50173-50192 Msa1344430:three_prime_UTR 30.0%
CCTAAAGGATAATGAACATG+TGG - tig0006807:49209-49228 None:intergenic 35.0%
CCACATGTTCATTATCCTTT+AGG + tig0006807:49206-49225 Msa1344430:five_prime_UTR 35.0%
TATAGGGCAAACCATGTTAA+TGG + tig0006807:49273-49292 Msa1344430:CDS 35.0%
! AACTGTTAGTGCCATTAACA+TGG - tig0006807:49287-49306 Msa1344440:three_prime_UTR 35.0%
GTTAATGGCACTAACAGTTA+CGG + tig0006807:49288-49307 Msa1344430:CDS 35.0%
TAATCAAATGTGACTGTGTC+AGG - tig0006807:49576-49595 Msa1344440:intron 35.0%
!!! CGACATGAACATGTTTTTAG+TGG + tig0006807:49663-49682 Msa1344430:intron 35.0%
GAAGAAAACAGAGGAAAACA+AGG + tig0006807:49740-49759 Msa1344430:CDS 35.0%
CAAGGAGAAAAATGACAAAG+AGG + tig0006807:49758-49777 Msa1344430:CDS 35.0%
AATGACAAAGAGGTAAGTAG+GGG + tig0006807:49768-49787 Msa1344430:intron 35.0%
! GATTACTTTGAGTTCGTAGA+AGG + tig0006807:49891-49910 Msa1344430:CDS 35.0%
! TTACTTTGAGTTCGTAGAAG+GGG + tig0006807:49893-49912 Msa1344430:CDS 35.0%
AAGCTTTCAGAAGCAGAAAA+GGG + tig0006807:49939-49958 Msa1344430:CDS 35.0%
!! TGTTAGCTTTAAGCCAATCA+AGG - tig0006807:49968-49987 Msa1344440:intron 35.0%
TACCAAATAGAAAAGAGGGA+TGG + tig0006807:50129-50148 Msa1344430:three_prime_UTR 35.0%
! AACCATCCCTCTTTTCTATT+TGG - tig0006807:50134-50153 Msa1344440:intron 35.0%
CCTAAAGGATAATGAACATG+TGG - tig0006807:49209-49228 None:intergenic 35.0%
CCACATGTTCATTATCCTTT+AGG + tig0006807:49206-49225 Msa1344430:five_prime_UTR 35.0%
TATAGGGCAAACCATGTTAA+TGG + tig0006807:49273-49292 Msa1344430:CDS 35.0%
! AACTGTTAGTGCCATTAACA+TGG - tig0006807:49287-49306 Msa1344440:three_prime_UTR 35.0%
GTTAATGGCACTAACAGTTA+CGG + tig0006807:49288-49307 Msa1344430:CDS 35.0%
TAATCAAATGTGACTGTGTC+AGG - tig0006807:49576-49595 Msa1344440:intron 35.0%
!!! CGACATGAACATGTTTTTAG+TGG + tig0006807:49663-49682 Msa1344430:intron 35.0%
GAAGAAAACAGAGGAAAACA+AGG + tig0006807:49740-49759 Msa1344430:CDS 35.0%
CAAGGAGAAAAATGACAAAG+AGG + tig0006807:49758-49777 Msa1344430:CDS 35.0%
AATGACAAAGAGGTAAGTAG+GGG + tig0006807:49768-49787 Msa1344430:intron 35.0%
! GATTACTTTGAGTTCGTAGA+AGG + tig0006807:49891-49910 Msa1344430:CDS 35.0%
! TTACTTTGAGTTCGTAGAAG+GGG + tig0006807:49893-49912 Msa1344430:CDS 35.0%
AAGCTTTCAGAAGCAGAAAA+GGG + tig0006807:49939-49958 Msa1344430:CDS 35.0%
!! TGTTAGCTTTAAGCCAATCA+AGG - tig0006807:49968-49987 Msa1344440:intron 35.0%
TACCAAATAGAAAAGAGGGA+TGG + tig0006807:50129-50148 Msa1344430:three_prime_UTR 35.0%
! AACCATCCCTCTTTTCTATT+TGG - tig0006807:50134-50153 Msa1344440:intron 35.0%
AAGAGGCGATGAGTTCTATA+GGG + tig0006807:49257-49276 Msa1344430:exon 40.0%
ATTATGAACTGCCTGCACAT+TGG - tig0006807:49332-49351 Msa1344440:three_prime_UTR 40.0%
TCTCCTTCCAAATTCCATGT+TGG - tig0006807:49389-49408 Msa1344440:three_prime_UTR 40.0%
AACATGGAATTTGGAAGGAG+AGG + tig0006807:49388-49407 Msa1344430:CDS 40.0%
! AGAAGTGATGACGCTACATA+GGG - tig0006807:49522-49541 Msa1344440:three_prime_UTR 40.0%
! TACTTTGAGTTCGTAGAAGG+GGG + tig0006807:49894-49913 Msa1344430:CDS 40.0%
GAAGCTTTCAGAAGCAGAAA+AGG + tig0006807:49938-49957 Msa1344430:CDS 40.0%
!! CAGAAAAGGGTATCCTTGAT+TGG + tig0006807:49952-49971 Msa1344430:CDS 40.0%
TCTGTTGGGAAATTCGGATA+TGG + tig0006807:50061-50080 Msa1344430:three_prime_UTR 40.0%
GGTACAGTTTCTTTCTTGCA+AGG + tig0006807:50082-50101 Msa1344430:three_prime_UTR 40.0%
AAGAGGCGATGAGTTCTATA+GGG + tig0006807:49257-49276 Msa1344430:exon 40.0%
ATTATGAACTGCCTGCACAT+TGG - tig0006807:49332-49351 Msa1344440:three_prime_UTR 40.0%
TCTCCTTCCAAATTCCATGT+TGG - tig0006807:49389-49408 Msa1344440:three_prime_UTR 40.0%
AACATGGAATTTGGAAGGAG+AGG + tig0006807:49388-49407 Msa1344430:CDS 40.0%
! AGAAGTGATGACGCTACATA+GGG - tig0006807:49522-49541 Msa1344440:three_prime_UTR 40.0%
! TACTTTGAGTTCGTAGAAGG+GGG + tig0006807:49894-49913 Msa1344430:CDS 40.0%
GAAGCTTTCAGAAGCAGAAA+AGG + tig0006807:49938-49957 Msa1344430:CDS 40.0%
!! CAGAAAAGGGTATCCTTGAT+TGG + tig0006807:49952-49971 Msa1344430:CDS 40.0%
TCTGTTGGGAAATTCGGATA+TGG + tig0006807:50061-50080 Msa1344430:three_prime_UTR 40.0%
GGTACAGTTTCTTTCTTGCA+AGG + tig0006807:50082-50101 Msa1344430:three_prime_UTR 40.0%
GAAGAGGCGATGAGTTCTAT+AGG + tig0006807:49256-49275 Msa1344430:exon 45.0%
GTATGCATCATCCAATGTGC+AGG + tig0006807:49318-49337 Msa1344430:CDS 45.0%
! TGGTGGTGCTTCTCAAAGTT+GGG - tig0006807:49369-49388 Msa1344440:three_prime_UTR 45.0%
!! TTGGTGGTGCTTCTCAAAGT+TGG - tig0006807:49370-49389 Msa1344440:three_prime_UTR 45.0%
!! TTTGAGAAGCACCACCAACA+TGG + tig0006807:49372-49391 Msa1344430:CDS 45.0%
AGCACCACCAACATGGAATT+TGG + tig0006807:49379-49398 Msa1344430:CDS 45.0%
CCTTCCAAATTCCATGTTGG+TGG - tig0006807:49386-49405 Msa1344440:three_prime_UTR 45.0%
CCACCAACATGGAATTTGGA+AGG + tig0006807:49383-49402 Msa1344430:CDS 45.0%
GAAGCAATGTCCTTGACTCA+GGG - tig0006807:49456-49475 Msa1344440:three_prime_UTR 45.0%
AGAAGCAATGTCCTTGACTC+AGG - tig0006807:49457-49476 Msa1344440:three_prime_UTR 45.0%
! CAGAAGTGATGACGCTACAT+AGG - tig0006807:49523-49542 Msa1344440:three_prime_UTR 45.0%
CTTCTGAATGTATGCGTGTC+TGG + tig0006807:49537-49556 Msa1344430:intron 45.0%
TGACTGTGTCAGGTCAATGT+CGG - tig0006807:49566-49585 Msa1344440:intron 45.0%
!! ACAGTTTTGTGTGTGGCAGA+GGG + tig0006807:49839-49858 Msa1344430:intron 45.0%
GGTTTGCAAGGAAAGGAAGA+GGG + tig0006807:49915-49934 Msa1344430:CDS 45.0%
GTTTGCAAGGAAAGGAAGAG+GGG + tig0006807:49916-49935 Msa1344430:CDS 45.0%
GAAGAGGCGATGAGTTCTAT+AGG + tig0006807:49256-49275 Msa1344430:exon 45.0%
GTATGCATCATCCAATGTGC+AGG + tig0006807:49318-49337 Msa1344430:CDS 45.0%
! TGGTGGTGCTTCTCAAAGTT+GGG - tig0006807:49369-49388 Msa1344440:three_prime_UTR 45.0%
!! TTGGTGGTGCTTCTCAAAGT+TGG - tig0006807:49370-49389 Msa1344440:three_prime_UTR 45.0%
!! TTTGAGAAGCACCACCAACA+TGG + tig0006807:49372-49391 Msa1344430:CDS 45.0%
AGCACCACCAACATGGAATT+TGG + tig0006807:49379-49398 Msa1344430:CDS 45.0%
CCTTCCAAATTCCATGTTGG+TGG - tig0006807:49386-49405 Msa1344440:three_prime_UTR 45.0%
CCACCAACATGGAATTTGGA+AGG + tig0006807:49383-49402 Msa1344430:CDS 45.0%
GAAGCAATGTCCTTGACTCA+GGG - tig0006807:49456-49475 Msa1344440:three_prime_UTR 45.0%
AGAAGCAATGTCCTTGACTC+AGG - tig0006807:49457-49476 Msa1344440:three_prime_UTR 45.0%
! CAGAAGTGATGACGCTACAT+AGG - tig0006807:49523-49542 Msa1344440:three_prime_UTR 45.0%
CTTCTGAATGTATGCGTGTC+TGG + tig0006807:49537-49556 Msa1344430:intron 45.0%
TGACTGTGTCAGGTCAATGT+CGG - tig0006807:49566-49585 Msa1344440:intron 45.0%
!! ACAGTTTTGTGTGTGGCAGA+GGG + tig0006807:49839-49858 Msa1344430:intron 45.0%
GGTTTGCAAGGAAAGGAAGA+GGG + tig0006807:49915-49934 Msa1344430:CDS 45.0%
GTTTGCAAGGAAAGGAAGAG+GGG + tig0006807:49916-49935 Msa1344430:CDS 45.0%
TCAGCGTCGTGTTCTCTCAT+AGG + tig0006807:49635-49654 Msa1344430:intron 50.0%
!! CACAGTTTTGTGTGTGGCAG+AGG + tig0006807:49838-49857 Msa1344430:intron 50.0%
TTCGTAGAAGGGGGTTTGCA+AGG + tig0006807:49903-49922 Msa1344430:CDS 50.0%
AGAAGGGGGTTTGCAAGGAA+AGG + tig0006807:49908-49927 Msa1344430:CDS 50.0%
GGGTTTGCAAGGAAAGGAAG+AGG + tig0006807:49914-49933 Msa1344430:CDS 50.0%
TCAGCGTCGTGTTCTCTCAT+AGG + tig0006807:49635-49654 Msa1344430:intron 50.0%
!! CACAGTTTTGTGTGTGGCAG+AGG + tig0006807:49838-49857 Msa1344430:intron 50.0%
TTCGTAGAAGGGGGTTTGCA+AGG + tig0006807:49903-49922 Msa1344430:CDS 50.0%
AGAAGGGGGTTTGCAAGGAA+AGG + tig0006807:49908-49927 Msa1344430:CDS 50.0%
GGGTTTGCAAGGAAAGGAAG+AGG + tig0006807:49914-49933 Msa1344430:CDS 50.0%
TGCGGTTGCGGCAATAACAG+TGG - tig0006807:49425-49444 Msa1344440:three_prime_UTR 55.0%
TGACTCAGGGTCTTGCGTTG+CGG - tig0006807:49443-49462 Msa1344440:three_prime_UTR 55.0%
CAACGCAAGACCCTGAGTCA+AGG + tig0006807:49443-49462 Msa1344430:CDS 55.0%
TGCGGTTGCGGCAATAACAG+TGG - tig0006807:49425-49444 Msa1344440:three_prime_UTR 55.0%
TGACTCAGGGTCTTGCGTTG+CGG - tig0006807:49443-49462 Msa1344440:three_prime_UTR 55.0%
CAACGCAAGACCCTGAGTCA+AGG + tig0006807:49443-49462 Msa1344430:CDS 55.0%
AGGGTCTTGCGTTGCGGTTG+CGG - tig0006807:49437-49456 Msa1344440:three_prime_UTR 60.0%
AGGGTCTTGCGTTGCGGTTG+CGG - tig0006807:49437-49456 Msa1344440:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
tig0006807 gene 49195 50212 49195 ID=Msa1344430;Name=Msa1344430
tig0006807 mRNA 49195 50212 49195 ID=Msa1344430-mRNA-1;Parent=Msa1344430;Name=Msa1344430-mRNA-1;_AED=0.24;_eAED=0.24;_QI=70|1|1|1|0.66|0.5|4|184|132
tig0006807 exon 49195 49481 49195 ID=Msa1344430-mRNA-1:exon:4519;Parent=Msa1344430-mRNA-1
tig0006807 exon 49733 49779 49733 ID=Msa1344430-mRNA-1:exon:4520;Parent=Msa1344430-mRNA-1
tig0006807 exon 49858 50007 49858 ID=Msa1344430-mRNA-1:exon:4521;Parent=Msa1344430-mRNA-1
tig0006807 exon 50044 50212 50044 ID=Msa1344430-mRNA-1:exon:4522;Parent=Msa1344430-mRNA-1
tig0006807 five_prime_UTR 49195 49264 49195 ID=Msa1344430-mRNA-1:five_prime_utr;Parent=Msa1344430-mRNA-1
tig0006807 CDS 49265 49481 49265 ID=Msa1344430-mRNA-1:cds;Parent=Msa1344430-mRNA-1
tig0006807 CDS 49733 49779 49733 ID=Msa1344430-mRNA-1:cds;Parent=Msa1344430-mRNA-1
tig0006807 CDS 49858 49992 49858 ID=Msa1344430-mRNA-1:cds;Parent=Msa1344430-mRNA-1
tig0006807 three_prime_UTR 49993 50007 49993 ID=Msa1344430-mRNA-1:three_prime_utr;Parent=Msa1344430-mRNA-1
tig0006807 three_prime_UTR 50044 50212 50044 ID=Msa1344430-mRNA-1:three_prime_utr;Parent=Msa1344430-mRNA-1
Gene Sequence

>Msa1344430

ATGAGTTCTATAGGGCAAACCATGTTAATGGCACTAACAGTTACGGTAAACAAGTATGCATCATCCAATGTGCAGGCAGTTCATAATAGAAAACAAGCAAACCCAACTTTGAGAAGCACCACCAACATGGAATTTGGAAGGAGAGGACTTGTCTTATCCACTGTTATTGCCGCAACCGCAACGCAAGACCCTGAGTCAAGGACATTGCTTCTTCAAAAATATTTGAAGAAAACAGAGGAAAACAAGGAGAAAAATGACAAAGAGAGGGTTGATAGTTATTACAAGCGTAATTACAAGGATTACTTTGAGTTCGTAGAAGGGGGTTTGCAAGGAAAGGAAGAGGGGAAGCTTTCAGAAGCAGAAAAGGGTATCCTTGATTGGCTTAAAGCTAACAAGTGA

Protein sequence

>Msa1344430

MSSIGQTMLMALTVTVNKYASSNVQAVHNRKQANPTLRSTTNMEFGRRGLVLSTVIAATATQDPESRTLLLQKYLKKTEENKEKNDKERVDSYYKRNYKDYFEFVEGGLQGKEEGKLSEAEKGILDWLKANK*