Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1014510 | XP_013448080.1 | 95.018 | 281 | 3 | 1 | 2 | 282 | 4 | 273 | 0.0 | 538 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1014510 | sp|Q8RXY6|SG29A_ARATH | 71.429 | 280 | 69 | 1 | 3 | 282 | 2 | 270 | 4.34e-146 | 413 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1014510 | A0A072TXE2 | 95.018 | 281 | 3 | 1 | 2 | 282 | 4 | 273 | 0.0 | 538 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0065680 | Msa1014510 | -0.817566 | 3.085081e-52 | -8.615850e-47 |
| Msa0081650 | Msa1014510 | 0.820574 | 6.383378e-53 | -8.615850e-47 |
| Msa0089820 | Msa1014510 | 0.800311 | 1.529484e-48 | -8.615850e-47 |
| Msa0104230 | Msa1014510 | 0.817357 | 3.438423e-52 | -8.615850e-47 |
| Msa0618970 | Msa1014510 | 0.817444 | 3.286941e-52 | -8.615850e-47 |
| Msa0667050 | Msa1014510 | 0.818034 | 2.419904e-52 | -8.615850e-47 |
| Msa0667770 | Msa1014510 | 0.808503 | 2.999199e-50 | -8.615850e-47 |
| Msa0667790 | Msa1014510 | 0.838967 | 2.099000e-57 | -8.615850e-47 |
| Msa0682090 | Msa1014510 | 0.801959 | 7.038661e-49 | -8.615850e-47 |
| Msa0703780 | Msa1014510 | 0.830607 | 2.669887e-55 | -8.615850e-47 |
| Msa0707250 | Msa1014510 | 0.806368 | 8.509364e-50 | -8.615850e-47 |
| Msa0711100 | Msa1014510 | 0.803192 | 3.920601e-49 | -8.615850e-47 |
| Msa0724480 | Msa1014510 | 0.845482 | 3.951147e-59 | -8.615850e-47 |
| Msa0817460 | Msa1014510 | 0.820477 | 6.720673e-53 | -8.615850e-47 |
| Msa0821190 | Msa1014510 | 0.813475 | 2.511507e-51 | -8.615850e-47 |
| Msa0822310 | Msa1014510 | -0.842120 | 3.140222e-58 | -8.615850e-47 |
| Msa0827280 | Msa1014510 | 0.805245 | 1.465055e-49 | -8.615850e-47 |
| Msa0832150 | Msa1014510 | 0.812895 | 3.367290e-51 | -8.615850e-47 |
| Msa0154840 | Msa1014510 | -0.802608 | 5.175576e-49 | -8.615850e-47 |
| Msa0159930 | Msa1014510 | 0.804971 | 1.671557e-49 | -8.615850e-47 |
| Msa0167980 | Msa1014510 | 0.802711 | 4.927782e-49 | -8.615850e-47 |
| Msa0175540 | Msa1014510 | 0.802995 | 4.304664e-49 | -8.615850e-47 |
| Msa0178510 | Msa1014510 | 0.805286 | 1.436141e-49 | -8.615850e-47 |
| Msa0189930 | Msa1014510 | -0.814447 | 1.533788e-51 | -8.615850e-47 |
| Msa0197660 | Msa1014510 | 0.808896 | 2.472800e-50 | -8.615850e-47 |
| Msa0217700 | Msa1014510 | 0.803624 | 3.190007e-49 | -8.615850e-47 |
| Msa0376910 | Msa1014510 | 0.808982 | 2.369301e-50 | -8.615850e-47 |
| Msa0378970 | Msa1014510 | 0.801263 | 9.779653e-49 | -8.615850e-47 |
| Msa0412840 | Msa1014510 | 0.803750 | 3.003136e-49 | -8.615850e-47 |
| Msa0428050 | Msa1014510 | 0.804645 | 1.956102e-49 | -8.615850e-47 |
| Msa0453690 | Msa1014510 | 0.821433 | 4.048431e-53 | -8.615850e-47 |
| Msa0468320 | Msa1014510 | 0.812623 | 3.862471e-51 | -8.615850e-47 |
| Msa0479170 | Msa1014510 | 0.822206 | 2.681209e-53 | -8.615850e-47 |
| Msa1001390 | Msa1014510 | 0.841597 | 4.315544e-58 | -8.615850e-47 |
| Msa1002850 | Msa1014510 | 0.834775 | 2.466654e-56 | -8.615850e-47 |
| Msa1014510 | Msa1024750 | 0.804483 | 2.114413e-49 | -8.615850e-47 |
| Msa1014510 | Msa1028590 | 0.813054 | 3.108699e-51 | -8.615850e-47 |
| Msa1014510 | Msa1031930 | 0.803434 | 3.492046e-49 | -8.615850e-47 |
| Msa1014510 | Msa1035480 | 0.802625 | 5.132415e-49 | -8.615850e-47 |
| Msa1014510 | Msa1051770 | 0.806323 | 8.696079e-50 | -8.615850e-47 |
| Msa1014510 | Msa1089320 | 0.826656 | 2.406876e-54 | -8.615850e-47 |
| Msa1014510 | Msa1093260 | 0.903663 | 2.748763e-79 | -8.615850e-47 |
| Msa1014510 | Msa1111870 | 0.816686 | 4.866443e-52 | -8.615850e-47 |
| Msa1014510 | Msa1115240 | 0.800370 | 1.488064e-48 | -8.615850e-47 |
| Msa1014510 | Msa1126450 | 0.805686 | 1.184003e-49 | -8.615850e-47 |
| Msa1014510 | Msa1142980 | 0.902786 | 6.785823e-79 | -8.615850e-47 |
| Msa1014510 | Msa1163730 | 0.807820 | 4.193185e-50 | -8.615850e-47 |
| Msa1014510 | Msa1204530 | 0.829511 | 4.941298e-55 | -8.615850e-47 |
| Msa1014510 | Msa1204630 | 0.833749 | 4.459433e-56 | -8.615850e-47 |
| Msa1014510 | Msa1206310 | 0.803038 | 4.217545e-49 | -8.615850e-47 |
| Msa1014510 | Msa1206360 | 0.805570 | 1.252386e-49 | -8.615850e-47 |
| Msa1014510 | Msa1270660 | 0.804136 | 2.496578e-49 | -8.615850e-47 |
| Msa1014510 | Msa1308870 | 0.808721 | 2.694443e-50 | -8.615850e-47 |
| Msa1014510 | Msa1316440 | 0.810507 | 1.113696e-50 | -8.615850e-47 |
| Msa1014510 | Msa1331000 | 0.802158 | 6.405837e-49 | -8.615850e-47 |
| Msa1014510 | Msa1346840 | 0.814124 | 1.807171e-51 | -8.615850e-47 |
| Msa1014510 | Msa1353980 | 0.812993 | 3.204662e-51 | -8.615850e-47 |
| Msa1014510 | Msa1364210 | 0.825574 | 4.352294e-54 | -8.615850e-47 |
| Msa1014510 | Msa1372150 | 0.811427 | 7.040566e-51 | -8.615850e-47 |
| Msa1014510 | Msa1376130 | 0.834111 | 3.620994e-56 | -8.615850e-47 |
| Msa1014510 | Msa1377570 | 0.838225 | 3.262702e-57 | -8.615850e-47 |
| Msa1014510 | Msa1380900 | 0.811065 | 8.434473e-51 | -8.615850e-47 |
| Msa1014510 | Msa1382790 | 0.800758 | 1.240345e-48 | -8.615850e-47 |
| Msa1014510 | Msa1384870 | 0.829074 | 6.307439e-55 | -8.615850e-47 |
| Msa1014510 | Msa1389880 | 0.819864 | 9.284775e-53 | -8.615850e-47 |
| Msa1014510 | Msa1394380 | 0.805611 | 1.228119e-49 | -8.615850e-47 |
| Msa1014510 | Msa1397120 | 0.810883 | 9.235649e-51 | -8.615850e-47 |
| Msa1014510 | Msa1403890 | 0.802023 | 6.827916e-49 | -8.615850e-47 |
| Msa1014510 | Msa1404300 | 0.806506 | 7.959190e-50 | -8.615850e-47 |
| Msa1014510 | Msa1407190 | 0.816423 | 5.572698e-52 | -8.615850e-47 |
| Msa1014510 | Msa1432130 | 0.814419 | 1.555581e-51 | -8.615850e-47 |
| Msa1014510 | Msa1449340 | -0.806115 | 9.619227e-50 | -8.615850e-47 |
| Msa1014510 | Msa1454620 | 0.807925 | 3.982774e-50 | -8.615850e-47 |
| Msa1014510 | Msa1462290 | 0.806347 | 8.596680e-50 | -8.615850e-47 |
| Msa1014510 | Msa1463900 | 0.827997 | 1.148163e-54 | -8.615850e-47 |
| Msa0239800 | Msa1014510 | 0.814608 | 1.412592e-51 | -8.615850e-47 |
| Msa0241140 | Msa1014510 | 0.830027 | 3.699284e-55 | -8.615850e-47 |
| Msa0257520 | Msa1014510 | 0.804966 | 1.675777e-49 | -8.615850e-47 |
| Msa0266350 | Msa1014510 | 0.800634 | 1.314386e-48 | -8.615850e-47 |
| Msa0277450 | Msa1014510 | 0.800829 | 1.199277e-48 | -8.615850e-47 |
| Msa0317510 | Msa1014510 | 0.808162 | 3.545664e-50 | -8.615850e-47 |
| Msa0336310 | Msa1014510 | 0.807214 | 5.637275e-50 | -8.615850e-47 |
| Msa0342010 | Msa1014510 | 0.814306 | 1.647962e-51 | -8.615850e-47 |
| Msa0518380 | Msa1014510 | 0.804452 | 2.146029e-49 | -8.615850e-47 |
| Msa0518440 | Msa1014510 | 0.812621 | 3.867374e-51 | -8.615850e-47 |
| Msa0532980 | Msa1014510 | 0.831007 | 2.130007e-55 | -8.615850e-47 |
| Msa0572840 | Msa1014510 | 0.826829 | 2.187809e-54 | -8.615850e-47 |
| Msa0574390 | Msa1014510 | 0.833045 | 6.680867e-56 | -8.615850e-47 |
| Msa0865030 | Msa1014510 | 0.816690 | 4.856382e-52 | -8.615850e-47 |
| Msa0946280 | Msa1014510 | -0.803641 | 3.164583e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1014510 | MtrunA17_Chr7g0226961 | 93.827 | 243 | 3 | 2 | 2 | 244 | 4 | 234 | 5.16e-163 | 452 |
| Msa1014510 | MtrunA17_Chr7g0226951 | 72.727 | 209 | 14 | 4 | 99 | 282 | 11 | 201 | 1.94e-99 | 290 |
| Msa1014510 | MtrunA17_Chr3g0109261 | 76.786 | 56 | 2 | 1 | 121 | 176 | 1 | 45 | 3.23e-20 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1014510 | AT3G27460.1 | 71.429 | 280 | 69 | 1 | 3 | 282 | 2 | 270 | 4.41e-147 | 413 |
| Msa1014510 | AT3G27460.4 | 70.922 | 282 | 69 | 2 | 3 | 282 | 2 | 272 | 3.78e-145 | 408 |
| Msa1014510 | AT3G27460.2 | 71.071 | 280 | 69 | 2 | 3 | 282 | 2 | 269 | 1.06e-144 | 407 |
| Msa1014510 | AT5G40550.2 | 74.286 | 280 | 60 | 2 | 4 | 282 | 2 | 270 | 8.06e-143 | 402 |
| Msa1014510 | AT5G40550.1 | 73.498 | 283 | 60 | 2 | 4 | 282 | 2 | 273 | 2.15e-142 | 401 |
| Msa1014510 | AT3G27460.3 | 69.421 | 242 | 63 | 1 | 3 | 244 | 2 | 232 | 2.46e-120 | 345 |
| Msa1014510 | AT3G27460.5 | 68.852 | 244 | 63 | 2 | 3 | 244 | 2 | 234 | 2.34e-118 | 340 |
| Msa1014510 | AT5G40550.4 | 72.727 | 242 | 54 | 2 | 4 | 244 | 2 | 232 | 5.23e-116 | 335 |
| Msa1014510 | AT5G40550.3 | 71.837 | 245 | 54 | 2 | 4 | 244 | 2 | 235 | 1.22e-115 | 335 |
Find 88 sgRNAs with CRISPR-Local
Find 462 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCAGACATTGTTTCAATTT+TGG | 0.125158 | 7_1:+23467944 | Msa1014510:CDS |
| CTTGATGGATCATTACTCTT+AGG | 0.196524 | 7_1:-23474584 | None:intergenic |
| AAACTAAGCATTTATTTAAT+AGG | 0.221134 | 7_1:-23467707 | None:intergenic |
| TCCTATTTAGTTTCCGATTT+CGG | 0.264917 | 7_1:+23467846 | Msa1014510:five_prime_UTR |
| GAAGTGGAAATCTATCAATT+TGG | 0.267392 | 7_1:+23475831 | Msa1014510:three_prime_UTR |
| TTTGGAGAATTCAAAGGAAT+TGG | 0.271177 | 7_1:+23467962 | Msa1014510:CDS |
| TCCGAAATCGGAAACTAAAT+AGG | 0.320639 | 7_1:-23467847 | None:intergenic |
| AATATAATCACCTTAATGTT+AGG | 0.325530 | 7_1:-23475886 | None:intergenic |
| GATAAACTTTCAAAATGTTT+AGG | 0.327044 | 7_1:-23475777 | None:intergenic |
| GCGCCTAAAAGAATTAAATT+AGG | 0.328194 | 7_1:+23467797 | Msa1014510:five_prime_UTR |
| TGAGGCTTGTGCCAGTCTTA+AGG | 0.332756 | 7_1:+23471982 | Msa1014510:CDS |
| CCAGGCTTCTCAACCACTTC+AGG | 0.334812 | 7_1:-23470961 | None:intergenic |
| TTTCAAAATGTTTAGGCAAT+GGG | 0.339284 | 7_1:-23475770 | None:intergenic |
| TGTTGTTTGGTTGTGTAATA+TGG | 0.342734 | 7_1:+23475596 | Msa1014510:three_prime_UTR |
| TTGTAGTTTAATTAAATGTT+GGG | 0.353212 | 7_1:+23475687 | Msa1014510:three_prime_UTR |
| TACGAGTTGGCCTAACATTA+AGG | 0.356939 | 7_1:+23475876 | Msa1014510:three_prime_UTR |
| CAAAGGAATTGGATCGGTTA+AGG | 0.359652 | 7_1:+23467973 | Msa1014510:CDS |
| AATTAGATCAATAAGAGAAT+TGG | 0.363116 | 7_1:-23475799 | None:intergenic |
| GAGGCTTGTGCCAGTCTTAA+GGG | 0.363424 | 7_1:+23471983 | Msa1014510:CDS |
| ATTTATTGACGATGTCCTTC+TGG | 0.363666 | 7_1:-23475526 | None:intergenic |
| TTATAAAGTGCAGTAGTTCC+TGG | 0.375275 | 7_1:-23474650 | None:intergenic |
| ATTGTAGTTTAATTAAATGT+TGG | 0.380433 | 7_1:+23475686 | Msa1014510:three_prime_UTR |
| CGTGGTTGTCCTTGCGGTCC+CGG | 0.396887 | 7_1:-23471357 | None:intergenic |
| GGAAAATCTTGGGCACTTGA+TGG | 0.409005 | 7_1:-23474599 | None:intergenic |
| CACACCACGTAATGCGGATA+AGG | 0.411160 | 7_1:+23472411 | Msa1014510:CDS |
| GATGATAGATATCTAACGTT+TGG | 0.417036 | 7_1:+23475710 | Msa1014510:three_prime_UTR |
| TATAAAGCAACAGTTGTTCA+AGG | 0.419272 | 7_1:+23474668 | Msa1014510:CDS |
| TGCCAGTCTTAAGGGTGAAC+AGG | 0.422074 | 7_1:+23471991 | Msa1014510:CDS |
| AACTAGCTTGTATTGTTGTT+TGG | 0.422739 | 7_1:+23475583 | Msa1014510:three_prime_UTR |
| TTTGCTAGTGAGTTATCTCC+AGG | 0.426706 | 7_1:-23470979 | None:intergenic |
| AAACAGAGTCAGACATTTCA+AGG | 0.430334 | 7_1:+23471933 | Msa1014510:CDS |
| TTGATGGATCATTACTCTTA+GGG | 0.432926 | 7_1:-23474583 | None:intergenic |
| TCCAAAATTGAAACAATGTC+TGG | 0.435691 | 7_1:-23467945 | None:intergenic |
| ACTTGATGTCTTGCTTCCTC+CGG | 0.436701 | 7_1:+23471338 | Msa1014510:CDS |
| CTTTCAAAATGTTTAGGCAA+TGG | 0.438464 | 7_1:-23475771 | None:intergenic |
| CAGAAGGCAATGAGCAGAAA+AGG | 0.439103 | 7_1:+23471900 | Msa1014510:intron |
| GGACAACCACGAAGAAGATT+AGG | 0.443668 | 7_1:+23471369 | Msa1014510:CDS |
| TCTAATTATTGTAATTGAAG+TGG | 0.444283 | 7_1:+23475815 | Msa1014510:three_prime_UTR |
| CATGTCTTGGCAGTTTATCC+AGG | 0.450728 | 7_1:+23474632 | Msa1014510:CDS |
| GTGTGTTTATTAAGCTATCA+AGG | 0.457088 | 7_1:+23475624 | Msa1014510:three_prime_UTR |
| CTTGATGTCTTGCTTCCTCC+GGG | 0.463139 | 7_1:+23471339 | Msa1014510:CDS |
| CCTGAAGTGGTTGAGAAGCC+TGG | 0.484381 | 7_1:+23470961 | Msa1014510:CDS |
| GACAAACCTAATCTTCTTCG+TGG | 0.485641 | 7_1:-23471375 | None:intergenic |
| TGGAAGGGCACTGTCCTTTG+AGG | 0.491583 | 7_1:-23475487 | None:intergenic |
| TCCACCTGGAAAACATGTCT+TGG | 0.499699 | 7_1:+23474619 | Msa1014510:CDS |
| CTTCTTCGTGGTTGTCCTTG+CGG | 0.502722 | 7_1:-23471363 | None:intergenic |
| CAGTTGTTCAAGGCCATCGC+AGG | 0.506081 | 7_1:+23474678 | Msa1014510:CDS |
| TCAAGTTGATTTCGCATACT+CGG | 0.508361 | 7_1:-23471962 | None:intergenic |
| ATGTTTAGGCAATGGGGATG+TGG | 0.519665 | 7_1:-23475763 | None:intergenic |
| CATTCATACGTGCATAAAGT+TGG | 0.520208 | 7_1:-23475661 | None:intergenic |
| CAGAGGAACCACTGTGTGGA+AGG | 0.522387 | 7_1:-23475503 | None:intergenic |
| TTTCGATGTAGCTCCTGAAG+TGG | 0.525698 | 7_1:+23470948 | Msa1014510:intron |
| TGACGATGTCCTTCTGGCAG+AGG | 0.532556 | 7_1:-23475520 | None:intergenic |
| AGACAGTACAAGCTTCCAAT+GGG | 0.537138 | 7_1:+23474545 | Msa1014510:intron |
| TTGCTTCCTCCGGGACCGCA+AGG | 0.538335 | 7_1:+23471348 | Msa1014510:CDS |
| TTGATGATGACGAAGAAGAC+GGG | 0.542193 | 7_1:+23475458 | Msa1014510:CDS |
| CAGATTTGAAGTACTTGATG+AGG | 0.545767 | 7_1:+23473729 | Msa1014510:intron |
| GTTCTGTATAACAATTGTTG+TGG | 0.554147 | 7_1:+23475732 | Msa1014510:three_prime_UTR |
| TGTAAAATGCACGTACGAGT+TGG | 0.566771 | 7_1:+23475863 | Msa1014510:three_prime_UTR |
| TGTAGTTTAATTAAATGTTG+GGG | 0.571957 | 7_1:+23475688 | Msa1014510:three_prime_UTR |
| TTTGATGATGACGAAGAAGA+CGG | 0.576368 | 7_1:+23475457 | Msa1014510:CDS |
| TGCCTGTTCACCCTTAAGAC+TGG | 0.577650 | 7_1:-23471993 | None:intergenic |
| TTCAAAATGTTTAGGCAATG+GGG | 0.580580 | 7_1:-23475769 | None:intergenic |
| CTGATGTCTTCATCATCACC+AGG | 0.580916 | 7_1:-23473754 | None:intergenic |
| AAGTTGGCTTATCAACATAG+TGG | 0.582888 | 7_1:-23471319 | None:intergenic |
| AAAGGAATGATATGTCCCAT+TGG | 0.585834 | 7_1:-23474560 | None:intergenic |
| AGAATTCAAAGGAATTGGAT+CGG | 0.593704 | 7_1:+23467967 | Msa1014510:CDS |
| CAGACAGTACAAGCTTCCAA+TGG | 0.596515 | 7_1:+23474544 | Msa1014510:intron |
| TGATTGGAACAGTTATGTGT+TGG | 0.602531 | 7_1:+23475432 | Msa1014510:intron |
| TCGTCCTTATCCGCATTACG+TGG | 0.610602 | 7_1:-23472415 | None:intergenic |
| GGATCATTACTCTTAGGGAA+AGG | 0.613606 | 7_1:-23474578 | None:intergenic |
| AGAGAATTATTACCCTGCGA+TGG | 0.620664 | 7_1:-23474691 | None:intergenic |
| AGAGGAACCACTGTGTGGAA+GGG | 0.621705 | 7_1:-23475502 | None:intergenic |
| AAGACGGGTCTCTACCTCAA+AGG | 0.623723 | 7_1:+23475473 | Msa1014510:CDS |
| GAAGTACTTGATGAGGAACC+TGG | 0.626345 | 7_1:+23473736 | Msa1014510:CDS |
| GAGGAAGCAAGACATCAAGT+TGG | 0.638642 | 7_1:-23471335 | None:intergenic |
| TAGGGTCACACCACGTAATG+CGG | 0.644304 | 7_1:+23472405 | Msa1014510:CDS |
| ACAGTGGTTCCTCTGCCAGA+AGG | 0.648099 | 7_1:+23475511 | Msa1014510:CDS |
| AGTTGTTCAAGGCCATCGCA+GGG | 0.656514 | 7_1:+23474679 | Msa1014510:CDS |
| ATGAAGACATCAGTGGCCAA+AGG | 0.658259 | 7_1:+23473764 | Msa1014510:CDS |
| GTAATGCGGATAAGGACGAA+TGG | 0.663221 | 7_1:+23472419 | Msa1014510:CDS |
| GGTTGTCCTTGCGGTCCCGG+AGG | 0.665723 | 7_1:-23471354 | None:intergenic |
| GAGTATGCGAAATCAACTTG+AGG | 0.676329 | 7_1:+23471964 | Msa1014510:CDS |
| CTGGCAGAGGAACCACTGTG+TGG | 0.695297 | 7_1:-23475507 | None:intergenic |
| GATAGCTTAATAAACACACA+TGG | 0.701136 | 7_1:-23475620 | None:intergenic |
| CTATCAAGGAAATTGCAATG+AGG | 0.738445 | 7_1:+23475638 | Msa1014510:three_prime_UTR |
| GACAGTGCCCTTCCACACAG+TGG | 0.740895 | 7_1:+23475495 | Msa1014510:CDS |
| GGTGATGATGAAGACATCAG+TGG | 0.768896 | 7_1:+23473757 | Msa1014510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTATTTTATTTTATTT+TGG | + | chr7_1:23468202-23468221 | Msa1014510:intron | 0.0% |
| !!! | TTTTTATTTTATTTTATTTT+GGG | + | chr7_1:23468203-23468222 | Msa1014510:intron | 0.0% |
| !!! | TTAATTTTAAATTTCGAATT+GGG | - | chr7_1:23467737-23467756 | None:intergenic | 10.0% |
| !!! | TTTAATTTTAAATTTCGAAT+TGG | - | chr7_1:23467738-23467757 | None:intergenic | 10.0% |
| !! | AATTAGGAAAAAATTAAATT+AGG | + | chr7_1:23467813-23467832 | Msa1014510:five_prime_UTR | 10.0% |
| !!! | TATATTTTTTTAAGAAATAG+AGG | + | chr7_1:23471577-23471596 | Msa1014510:intron | 10.0% |
| !!! | ACTCATTTTTTTTAAATTTA+TGG | + | chr7_1:23471641-23471660 | Msa1014510:intron | 10.0% |
| !! | AATTATTAATATAAAGATTG+AGG | + | chr7_1:23473163-23473182 | Msa1014510:intron | 10.0% |
| !! | AAACTAAGCATTTATTTAAT+AGG | - | chr7_1:23467710-23467729 | None:intergenic | 15.0% |
| !! | TTAAAAGAAAAACAAAAACA+CGG | + | chr7_1:23467753-23467772 | Msa1014510:five_prime_UTR | 15.0% |
| !!! | TTTCCTAATTTAATTCTTTT+AGG | - | chr7_1:23467803-23467822 | None:intergenic | 15.0% |
| !!! | ATTTATTTTCATTGATATTG+TGG | + | chr7_1:23469591-23469610 | Msa1014510:intron | 15.0% |
| !! | AAAAAAAACAAAACATTGAA+AGG | - | chr7_1:23470026-23470045 | None:intergenic | 15.0% |
| !! | AATGAAGAAATATATAGAAA+AGG | + | chr7_1:23470388-23470407 | Msa1014510:intron | 15.0% |
| !!! | AAATAATAACATTGTACTTT+TGG | + | chr7_1:23470466-23470485 | Msa1014510:intron | 15.0% |
| !!! | AATAATAACATTGTACTTTT+GGG | + | chr7_1:23470467-23470486 | Msa1014510:intron | 15.0% |
| !!! | ATAATTCTTCATTTTGTTTT+TGG | + | chr7_1:23471284-23471303 | Msa1014510:intron | 15.0% |
| !! | AATTTAAAAAAAATGAGTGT+TGG | - | chr7_1:23471639-23471658 | None:intergenic | 15.0% |
| !! | TATAAATATCAAAATACATG+TGG | + | chr7_1:23471722-23471741 | Msa1014510:intron | 15.0% |
| !! | ATAAATATCAAAATACATGT+GGG | + | chr7_1:23471723-23471742 | Msa1014510:intron | 15.0% |
| !!! | TGTATTTTATCAAACTTAAA+GGG | - | chr7_1:23472026-23472045 | None:intergenic | 15.0% |
| !!! | TTGTATTTTATCAAACTTAA+AGG | - | chr7_1:23472027-23472046 | None:intergenic | 15.0% |
| !!! | ATTCATTTTCACATTAATTT+GGG | + | chr7_1:23472586-23472605 | Msa1014510:intron | 15.0% |
| !! | AACAATTTCAGAAATATTAT+TGG | - | chr7_1:23473394-23473413 | None:intergenic | 15.0% |
| !!! | ATATTTCTGAAATTGTTATA+TGG | + | chr7_1:23473397-23473416 | Msa1014510:intron | 15.0% |
| !! | GCTCAAATAATTTAAAAATA+TGG | - | chr7_1:23473445-23473464 | None:intergenic | 15.0% |
| !!! | TATTTTTAAATTATTTGAGC+TGG | + | chr7_1:23473445-23473464 | Msa1014510:intron | 15.0% |
| !!! | ATTTTTAAATTATTTGAGCT+GGG | + | chr7_1:23473446-23473465 | Msa1014510:intron | 15.0% |
| !! | GAATTAATAGAATAACAAAA+AGG | - | chr7_1:23473691-23473710 | None:intergenic | 15.0% |
| !! | TCTATAAATTTATAGAGATT+CGG | - | chr7_1:23475055-23475074 | None:intergenic | 15.0% |
| !! | AATCTCTATAAATTTATAGA+AGG | + | chr7_1:23475055-23475074 | Msa1014510:intron | 15.0% |
| !! | ATTGTAGTTTAATTAAATGT+TGG | + | chr7_1:23475686-23475705 | Msa1014510:three_prime_UTR | 15.0% |
| !! | TTGTAGTTTAATTAAATGTT+GGG | + | chr7_1:23475687-23475706 | Msa1014510:three_prime_UTR | 15.0% |
| !! | ATCCTAATTGTAATGAAATT+TGG | + | chr7_1:23468109-23468128 | Msa1014510:intron | 20.0% |
| !! | ATCCAAATTTCATTACAATT+AGG | - | chr7_1:23468114-23468133 | None:intergenic | 20.0% |
| !! | TAAAATTCGTAAACATTGAT+TGG | + | chr7_1:23468291-23468310 | Msa1014510:intron | 20.0% |
| !!! | CAAATTATGATTTAGTTTTG+CGG | + | chr7_1:23468351-23468370 | Msa1014510:intron | 20.0% |
| !!! | AAATTATGATTTAGTTTTGC+GGG | + | chr7_1:23468352-23468371 | Msa1014510:intron | 20.0% |
| !! | TAATATTCAAAATAAGTAGC+AGG | + | chr7_1:23469294-23469313 | Msa1014510:intron | 20.0% |
| !!! | TTTTATTCTCATTGATATTG+CGG | + | chr7_1:23469895-23469914 | Msa1014510:intron | 20.0% |
| !! | AAGAAAATTAAATGCTTAAG+AGG | - | chr7_1:23471072-23471091 | None:intergenic | 20.0% |
| !! | ATAAGCTTAAGAAGATATAA+AGG | - | chr7_1:23471431-23471450 | None:intergenic | 20.0% |
| !! | ATAACAAATCAAAATTCTCT+TGG | - | chr7_1:23471518-23471537 | None:intergenic | 20.0% |
| !!! | TCGCATTATTTAATATGTTT+TGG | + | chr7_1:23472359-23472378 | Msa1014510:intron | 20.0% |
| !!! | AAAAGTGATTCATTTTGATA+AGG | + | chr7_1:23472450-23472469 | Msa1014510:CDS | 20.0% |
| !!! | TCATTTTGATAAGGAATTAA+AGG | + | chr7_1:23472459-23472478 | Msa1014510:CDS | 20.0% |
| !! | AATTAATGTGAAAATGAATG+TGG | - | chr7_1:23472585-23472604 | None:intergenic | 20.0% |
| !!! | CATTCATTTTCACATTAATT+TGG | + | chr7_1:23472585-23472604 | Msa1014510:intron | 20.0% |
| !! | GTAATATCTTATACAATGAA+AGG | + | chr7_1:23472690-23472709 | Msa1014510:intron | 20.0% |
| !!! | AAATAGTACTTTTACCATTA+AGG | - | chr7_1:23473349-23473368 | None:intergenic | 20.0% |
| !! | TTTCAGAAATATTATTGGTA+AGG | - | chr7_1:23473389-23473408 | None:intergenic | 20.0% |
| !! | TTGTGTTTAATAGTTTACAA+CGG | + | chr7_1:23473807-23473826 | Msa1014510:intron | 20.0% |
| !! | AAGTATTAAAGAGAAAGTTA+GGG | - | chr7_1:23474062-23474081 | None:intergenic | 20.0% |
| !!! | AAAGTATTAAAGAGAAAGTT+AGG | - | chr7_1:23474063-23474082 | None:intergenic | 20.0% |
| !! | TGAAATGAAAATATCCAAAT+TGG | - | chr7_1:23474118-23474137 | None:intergenic | 20.0% |
| !!! | AAAAAGTATAACTCAGTTTT+AGG | - | chr7_1:23474382-23474401 | None:intergenic | 20.0% |
| !! | ATATTGTTACTACATTTGAA+TGG | + | chr7_1:23474486-23474505 | Msa1014510:intron | 20.0% |
| !! | AATAATAGACTACAAATTCA+TGG | - | chr7_1:23474762-23474781 | None:intergenic | 20.0% |
| !! | TGAGTAAGTATAATTTCTTT+AGG | + | chr7_1:23474894-23474913 | Msa1014510:intron | 20.0% |
| !!! | TGATATTTAGAACTAAGAAT+GGG | - | chr7_1:23474930-23474949 | None:intergenic | 20.0% |
| !!! | ATGATATTTAGAACTAAGAA+TGG | - | chr7_1:23474931-23474950 | None:intergenic | 20.0% |
| !!! | TCTTTTATTCTTTAGTGATT+AGG | + | chr7_1:23474998-23475017 | Msa1014510:intron | 20.0% |
| !! | TTTAGTGATTAGGAATTAAT+TGG | + | chr7_1:23475008-23475027 | Msa1014510:intron | 20.0% |
| !!! | ATAATTTTATCAGTCTAACT+TGG | - | chr7_1:23475171-23475190 | None:intergenic | 20.0% |
| !! | ACAATTTCATTATAAAGTGA+TGG | - | chr7_1:23475197-23475216 | None:intergenic | 20.0% |
| !!! | ACTTAAGAATTTTACATATC+AGG | + | chr7_1:23475282-23475301 | Msa1014510:intron | 20.0% |
| !!! | GATAGATTTTTTACATTTTC+AGG | + | chr7_1:23475304-23475323 | Msa1014510:intron | 20.0% |
| !! | TGTAGTTTAATTAAATGTTG+GGG | + | chr7_1:23475688-23475707 | Msa1014510:three_prime_UTR | 20.0% |
| !! | GATAAACTTTCAAAATGTTT+AGG | - | chr7_1:23475780-23475799 | None:intergenic | 20.0% |
| !! | AATTAGATCAATAAGAGAAT+TGG | - | chr7_1:23475802-23475821 | None:intergenic | 20.0% |
| !! | TCTAATTATTGTAATTGAAG+TGG | + | chr7_1:23475815-23475834 | Msa1014510:three_prime_UTR | 20.0% |
| !! | AATATAATCACCTTAATGTT+AGG | - | chr7_1:23475889-23475908 | None:intergenic | 20.0% |
| !!! | TTCAATTTTGGAGAATTCAA+AGG | + | chr7_1:23467956-23467975 | Msa1014510:CDS | 25.0% |
| !!! | AATTATGATTTAGTTTTGCG+GGG | + | chr7_1:23468353-23468372 | Msa1014510:intron | 25.0% |
| ! | CCTAATGAAAAAATATAACG+AGG | - | chr7_1:23468476-23468495 | None:intergenic | 25.0% |
| !!! | CCTCGTTATATTTTTTCATT+AGG | + | chr7_1:23468473-23468492 | Msa1014510:intron | 25.0% |
| ! | TGATTTATTGTGGAAAATTG+TGG | + | chr7_1:23469079-23469098 | Msa1014510:intron | 25.0% |
| ! | TGATTGTGATAACTGAAAAA+TGG | + | chr7_1:23469201-23469220 | Msa1014510:intron | 25.0% |
| ! | GATTGTGATAACTGAAAAAT+GGG | + | chr7_1:23469202-23469221 | Msa1014510:intron | 25.0% |
| ! | TAGAAAATCCTGATCAAATA+TGG | + | chr7_1:23469356-23469375 | Msa1014510:intron | 25.0% |
| !! | TTAAATTCGAGTTAAGTAAC+AGG | + | chr7_1:23469549-23469568 | Msa1014510:intron | 25.0% |
| !! | ATATTCGATTCTGTTTTCTT+TGG | + | chr7_1:23469817-23469836 | Msa1014510:intron | 25.0% |
| ! | TTTATTCTCATTGATATTGC+GGG | + | chr7_1:23469896-23469915 | Msa1014510:intron | 25.0% |
| !! | ACTTGTTGCAAAAATAATTG+TGG | + | chr7_1:23470059-23470078 | Msa1014510:intron | 25.0% |
| ! | TTATATCCGAGTTAAGTAAA+AGG | + | chr7_1:23470275-23470294 | Msa1014510:intron | 25.0% |
| !! | TTTAGTCCTTTTACTTAACT+CGG | - | chr7_1:23470284-23470303 | None:intergenic | 25.0% |
| !! | TTCATTTTCATTTACAGTTG+AGG | + | chr7_1:23470318-23470337 | Msa1014510:intron | 25.0% |
| ! | TATTTCTTCATTGTTTCAAC+AGG | - | chr7_1:23470380-23470399 | None:intergenic | 25.0% |
| !! | GACTTTTCTTTAGTTGTATT+TGG | + | chr7_1:23470519-23470538 | Msa1014510:intron | 25.0% |
| ! | ATCAAATATCCAATTTGTGA+TGG | + | chr7_1:23470572-23470591 | Msa1014510:intron | 25.0% |
| ! | AAGCTAACGAAATAAACATT+TGG | - | chr7_1:23470601-23470620 | None:intergenic | 25.0% |
| ! | TAAGCTAGTAGTATATCATT+GGG | + | chr7_1:23470803-23470822 | Msa1014510:intron | 25.0% |
| ! | TTCATTCTTATCTTACAAGA+GGG | - | chr7_1:23471171-23471190 | None:intergenic | 25.0% |
| ! | ATTCATTCTTATCTTACAAG+AGG | - | chr7_1:23471172-23471191 | None:intergenic | 25.0% |
| !! | AAGCCTTATAAGAATTGTTT+AGG | + | chr7_1:23471197-23471216 | Msa1014510:intron | 25.0% |
| ! | TTTCACATCTACTAAAGATA+TGG | - | chr7_1:23471223-23471242 | None:intergenic | 25.0% |
| !!! | TTTTTTAAGAAATAGAGGTG+TGG | + | chr7_1:23471582-23471601 | Msa1014510:intron | 25.0% |
| !!! | TAGAATGTTCTAAAATCACA+AGG | + | chr7_1:23472208-23472227 | Msa1014510:intron | 25.0% |
| ! | AAATCATAAAACAACTGAGA+TGG | + | chr7_1:23472239-23472258 | Msa1014510:intron | 25.0% |
| ! | TTATTAACTTTCACTTTCTC+AGG | + | chr7_1:23472293-23472312 | Msa1014510:intron | 25.0% |
| ! | AAGAACAACAGAAAAAGTAA+GGG | + | chr7_1:23472724-23472743 | Msa1014510:intron | 25.0% |
| ! | ATGAAAAAATAGTAGCTGTT+TGG | + | chr7_1:23473644-23473663 | Msa1014510:intron | 25.0% |
| ! | AACACAATAAATTTCCCAAT+AGG | - | chr7_1:23473794-23473813 | None:intergenic | 25.0% |
| !!! | TATCCTCAATTTTGACTTAT+TGG | + | chr7_1:23473954-23473973 | Msa1014510:intron | 25.0% |
| ! | AACATCTACCATTGAAAATA+TGG | - | chr7_1:23474038-23474057 | None:intergenic | 25.0% |
| ! | AATGAAAATATCCAAATTGG+TGG | - | chr7_1:23474115-23474134 | None:intergenic | 25.0% |
| ! | TGTTGAATGAGAAAAAATAG+AGG | + | chr7_1:23474158-23474177 | Msa1014510:intron | 25.0% |
| ! | TCACAACATTAATTGCATAA+TGG | + | chr7_1:23474266-23474285 | Msa1014510:intron | 25.0% |
| ! | ACAATAAAATCCAAGTAGAA+TGG | - | chr7_1:23474442-23474461 | None:intergenic | 25.0% |
| !! | ATTTTATTGTGTTGAACAGT+TGG | + | chr7_1:23474452-23474471 | Msa1014510:intron | 25.0% |
| !! | TTTTATTGTGTTGAACAGTT+GGG | + | chr7_1:23474453-23474472 | Msa1014510:intron | 25.0% |
| ! | AAAATTGGTTAGTATCATGT+TGG | - | chr7_1:23474814-23474833 | None:intergenic | 25.0% |
| ! | AACATAAAGACAATTGAAGT+AGG | + | chr7_1:23475121-23475140 | Msa1014510:intron | 25.0% |
| ! | TTTCAAAATGTTTAGGCAAT+GGG | - | chr7_1:23475773-23475792 | None:intergenic | 25.0% |
| ! | GAGTAATTGTTGAGTTTTTG+AGG | - | chr7_1:23467688-23467707 | None:intergenic | 30.0% |
| GCGCCTAAAAGAATTAAATT+AGG | + | chr7_1:23467797-23467816 | Msa1014510:five_prime_UTR | 30.0% | |
| ! | TCCTATTTAGTTTCCGATTT+CGG | + | chr7_1:23467846-23467865 | Msa1014510:five_prime_UTR | 30.0% |
| ! | TTTTCTTTTCGATCCGAAAT+CGG | - | chr7_1:23467862-23467881 | None:intergenic | 30.0% |
| ! | ACCAGACATTGTTTCAATTT+TGG | + | chr7_1:23467944-23467963 | Msa1014510:CDS | 30.0% |
| TCCAAAATTGAAACAATGTC+TGG | - | chr7_1:23467948-23467967 | None:intergenic | 30.0% | |
| TTTGGAGAATTCAAAGGAAT+TGG | + | chr7_1:23467962-23467981 | Msa1014510:CDS | 30.0% | |
| AGAATTCAAAGGAATTGGAT+CGG | + | chr7_1:23467967-23467986 | Msa1014510:CDS | 30.0% | |
| ATAAGTCAATCCAAACAAAC+CGG | - | chr7_1:23468395-23468414 | None:intergenic | 30.0% | |
| !! | TAAGTTTTGTGAGACTGTTT+AGG | + | chr7_1:23468434-23468453 | Msa1014510:intron | 30.0% |
| CAAAATTAGCTCAATCCAAA+CGG | + | chr7_1:23468706-23468725 | Msa1014510:intron | 30.0% | |
| ! | CGTATGTATTAGCTTACATA+GGG | - | chr7_1:23468733-23468752 | None:intergenic | 30.0% |
| ! | ACGTATGTATTAGCTTACAT+AGG | - | chr7_1:23468734-23468753 | None:intergenic | 30.0% |
| AACAAAACTTAGTGTCTGTT+TGG | - | chr7_1:23468806-23468825 | None:intergenic | 30.0% | |
| CGACATACCAAATTCAATAT+CGG | - | chr7_1:23468926-23468945 | None:intergenic | 30.0% | |
| TGCATCAAAAATCTTGATGT+CGG | + | chr7_1:23469407-23469426 | Msa1014510:intron | 30.0% | |
| ! | AAAATGCTGCTTCTAAAAAG+TGG | + | chr7_1:23469457-23469476 | Msa1014510:intron | 30.0% |
| ATTGATATTGTGGAGAATCA+TGG | + | chr7_1:23469601-23469620 | Msa1014510:intron | 30.0% | |
| !!! | TGAATTTTCCTTGTTTTCGT+TGG | + | chr7_1:23469778-23469797 | Msa1014510:intron | 30.0% |
| TTATTCTCATTGATATTGCG+GGG | + | chr7_1:23469897-23469916 | Msa1014510:intron | 30.0% | |
| AAACAAAACATTGAAAGGTG+TGG | - | chr7_1:23470021-23470040 | None:intergenic | 30.0% | |
| !! | ATGAATTTTCCTTGTTTCGT+TGG | + | chr7_1:23470238-23470257 | Msa1014510:intron | 30.0% |
| ! | TTTTCATTTACAGTTGAGGA+AGG | + | chr7_1:23470322-23470341 | Msa1014510:intron | 30.0% |
| TTTGATGAATTACCCTTTAG+AGG | - | chr7_1:23470558-23470577 | None:intergenic | 30.0% | |
| ! | ATTTGGTTTCCATCACAAAT+TGG | - | chr7_1:23470584-23470603 | None:intergenic | 30.0% |
| ! | TATTTCGTTAGCTTCCATAA+AGG | + | chr7_1:23470607-23470626 | Msa1014510:intron | 30.0% |
| ! | TAGCTTCCATAAAGGAATTT+TGG | + | chr7_1:23470615-23470634 | Msa1014510:intron | 30.0% |
| ! | AGCTTCCATAAAGGAATTTT+GGG | + | chr7_1:23470616-23470635 | Msa1014510:intron | 30.0% |
| AGTTTCCCAAAATTCCTTTA+TGG | - | chr7_1:23470624-23470643 | None:intergenic | 30.0% | |
| CTAAGCTAGTAGTATATCAT+TGG | + | chr7_1:23470802-23470821 | Msa1014510:intron | 30.0% | |
| GAAGAGTTGAAAGTTTATCT+GGG | - | chr7_1:23471114-23471133 | None:intergenic | 30.0% | |
| TGGCCTAAACAATTCTTATA+AGG | - | chr7_1:23471203-23471222 | None:intergenic | 30.0% | |
| ACAAATCAAAATTCTCTTGG+TGG | - | chr7_1:23471515-23471534 | None:intergenic | 30.0% | |
| AAACGTCATAACTACATTGT+CGG | - | chr7_1:23471682-23471701 | None:intergenic | 30.0% | |
| AACTGACATCTAATTGGATT+GGG | - | chr7_1:23471846-23471865 | None:intergenic | 30.0% | |
| AACAGTTATTCTGTTACAGA+AGG | + | chr7_1:23471884-23471903 | Msa1014510:intron | 30.0% | |
| AATGTGAAAATGAATGTGGA+CGG | - | chr7_1:23472581-23472600 | None:intergenic | 30.0% | |
| ATAAATAGAGCAAGGAAGAT+AGG | - | chr7_1:23472620-23472639 | None:intergenic | 30.0% | |
| CTTGCTCTATTTATCTACTA+GGG | + | chr7_1:23472626-23472645 | Msa1014510:intron | 30.0% | |
| TTGCTCTATTTATCTACTAG+GGG | + | chr7_1:23472627-23472646 | Msa1014510:intron | 30.0% | |
| ! | TTATACAATGAAAGGTGTAG+AGG | + | chr7_1:23472698-23472717 | Msa1014510:intron | 30.0% |
| CAAGAACAACAGAAAAAGTA+AGG | + | chr7_1:23472723-23472742 | Msa1014510:intron | 30.0% | |
| AGAACAACAGAAAAAGTAAG+GGG | + | chr7_1:23472725-23472744 | Msa1014510:intron | 30.0% | |
| ! | AATCACTTCAAAGCATCAAT+TGG | - | chr7_1:23472827-23472846 | None:intergenic | 30.0% |
| !! | ATTGATGCTTTGAAGTGATT+AGG | + | chr7_1:23472827-23472846 | Msa1014510:intron | 30.0% |
| ! | CTAATTACTGGTGTTGAATT+AGG | - | chr7_1:23472943-23472962 | None:intergenic | 30.0% |
| TCTCTGATTGATACCATATA+TGG | + | chr7_1:23473301-23473320 | Msa1014510:intron | 30.0% | |
| GTGGAAAGAAATATTAAGCA+AGG | - | chr7_1:23473849-23473868 | None:intergenic | 30.0% | |
| CGAAATGTTTATAAATGTGG+TGG | - | chr7_1:23473868-23473887 | None:intergenic | 30.0% | |
| CTGCGAAATGTTTATAAATG+TGG | - | chr7_1:23473871-23473890 | None:intergenic | 30.0% | |
| TATAAACATTTCGCAGTAGT+TGG | + | chr7_1:23473875-23473894 | Msa1014510:intron | 30.0% | |
| ! | CTACTCTACCATATTTTCAA+TGG | + | chr7_1:23474027-23474046 | Msa1014510:intron | 30.0% |
| TCCAGTTTCATACAACATTA+CGG | + | chr7_1:23474326-23474345 | Msa1014510:intron | 30.0% | |
| !!! | AGTATAACTCAGTTTTAGGA+AGG | - | chr7_1:23474378-23474397 | None:intergenic | 30.0% |
| GACGAAATAAAAGGAAGTTT+CGG | - | chr7_1:23474420-23474439 | None:intergenic | 30.0% | |
| AGTAGAATGGACGAAATAAA+AGG | - | chr7_1:23474429-23474448 | None:intergenic | 30.0% | |
| TTTATTTCGTCCATTCTACT+TGG | + | chr7_1:23474429-23474448 | Msa1014510:intron | 30.0% | |
| !!! | ATGGCTTGTGCTTATTTTTT+TGG | + | chr7_1:23474505-23474524 | Msa1014510:intron | 30.0% |
| ! | TTGATGGATCATTACTCTTA+GGG | - | chr7_1:23474586-23474605 | None:intergenic | 30.0% |
| TATAAAGCAACAGTTGTTCA+AGG | + | chr7_1:23474668-23474687 | Msa1014510:CDS | 30.0% | |
| AATTCTCTATTTCCCTTCAT+AGG | + | chr7_1:23474706-23474725 | Msa1014510:intron | 30.0% | |
| ATTCTCTATTTCCCTTCATA+GGG | + | chr7_1:23474707-23474726 | Msa1014510:intron | 30.0% | |
| AACATGCACAACACAAAAAT+TGG | - | chr7_1:23474829-23474848 | None:intergenic | 30.0% | |
| AATTGAAGTAGGATGTCATT+AGG | + | chr7_1:23475132-23475151 | Msa1014510:intron | 30.0% | |
| ATTGAAGTAGGATGTCATTA+GGG | + | chr7_1:23475133-23475152 | Msa1014510:intron | 30.0% | |
| ATTCTTCAAAAATTAGCCGA+GGG | - | chr7_1:23475341-23475360 | None:intergenic | 30.0% | |
| TCTTATGATTGCTTACTCTA+TGG | + | chr7_1:23475409-23475428 | Msa1014510:intron | 30.0% | |
| ! | AACTAGCTTGTATTGTTGTT+TGG | + | chr7_1:23475583-23475602 | Msa1014510:three_prime_UTR | 30.0% |
| ! | TGTTGTTTGGTTGTGTAATA+TGG | + | chr7_1:23475596-23475615 | Msa1014510:three_prime_UTR | 30.0% |
| GATAGCTTAATAAACACACA+TGG | - | chr7_1:23475623-23475642 | None:intergenic | 30.0% | |
| GTGTGTTTATTAAGCTATCA+AGG | + | chr7_1:23475624-23475643 | Msa1014510:three_prime_UTR | 30.0% | |
| GATGATAGATATCTAACGTT+TGG | + | chr7_1:23475710-23475729 | Msa1014510:three_prime_UTR | 30.0% | |
| GTTCTGTATAACAATTGTTG+TGG | + | chr7_1:23475732-23475751 | Msa1014510:three_prime_UTR | 30.0% | |
| TTCAAAATGTTTAGGCAATG+GGG | - | chr7_1:23475772-23475791 | None:intergenic | 30.0% | |
| CTTTCAAAATGTTTAGGCAA+TGG | - | chr7_1:23475774-23475793 | None:intergenic | 30.0% | |
| GAAGTGGAAATCTATCAATT+TGG | + | chr7_1:23475831-23475850 | Msa1014510:three_prime_UTR | 30.0% | |
| TCCGAAATCGGAAACTAAAT+AGG | - | chr7_1:23467850-23467869 | None:intergenic | 35.0% | |
| AGAGAAAGTGAGTAACTAAC+TGG | - | chr7_1:23468054-23468073 | None:intergenic | 35.0% | |
| CTCTCTTGATTGATTGTGTT+TGG | + | chr7_1:23468172-23468191 | Msa1014510:intron | 35.0% | |
| GGGTTCATTAATTTAGACTC+CGG | + | chr7_1:23468373-23468392 | Msa1014510:intron | 35.0% | |
| ! | AATTTAGACTCCGGTTTGTT+TGG | + | chr7_1:23468382-23468401 | Msa1014510:intron | 35.0% |
| ! | TGTTTGGATTGACTTATCTG+AGG | + | chr7_1:23468398-23468417 | Msa1014510:intron | 35.0% |
| TTTCATAAGCTCAACCCAAA+CGG | - | chr7_1:23468543-23468562 | None:intergenic | 35.0% | |
| !!! | GACACTAAGTTTTGTTGTTG+TGG | + | chr7_1:23468810-23468829 | Msa1014510:intron | 35.0% |
| ! | TTGTGTGTTTGAGTTTCAAG+TGG | + | chr7_1:23468949-23468968 | Msa1014510:intron | 35.0% |
| !!! | GTCTACGGACAATTTTTTCT+TGG | + | chr7_1:23468985-23469004 | Msa1014510:intron | 35.0% |
| ! | GTGAACAAGGTTTTCAATTG+TGG | + | chr7_1:23469038-23469057 | Msa1014510:intron | 35.0% |
| CCACAATAAATCATCAACAG+TGG | - | chr7_1:23469072-23469091 | None:intergenic | 35.0% | |
| !! | CCACTGTTGATGATTTATTG+TGG | + | chr7_1:23469069-23469088 | Msa1014510:intron | 35.0% |
| TGATGTCACAACCAAAATTG+TGG | + | chr7_1:23469154-23469173 | Msa1014510:intron | 35.0% | |
| AAAATGGGCATATCAACTCA+TGG | + | chr7_1:23469217-23469236 | Msa1014510:intron | 35.0% | |
| !!! | TGAATTTCCCTTGTTTTCGT+TGG | + | chr7_1:23469257-23469276 | Msa1014510:intron | 35.0% |
| ACACATACCAACGAAAACAA+GGG | - | chr7_1:23469267-23469286 | None:intergenic | 35.0% | |
| AACACATACCAACGAAAACA+AGG | - | chr7_1:23469268-23469287 | None:intergenic | 35.0% | |
| ACAAACAGCCATATTTGATC+AGG | - | chr7_1:23469367-23469386 | None:intergenic | 35.0% | |
| ! | AAAAGTGGACAGCTTTTATC+AGG | + | chr7_1:23469472-23469491 | Msa1014510:intron | 35.0% |
| ! | GCTTTTATCAGGATTAGAGT+TGG | + | chr7_1:23469483-23469502 | Msa1014510:intron | 35.0% |
| CCACACTTAACAACAAAAAC+AGG | - | chr7_1:23469524-23469543 | None:intergenic | 35.0% | |
| !!! | CCTGTTTTTGTTGTTAAGTG+TGG | + | chr7_1:23469521-23469540 | Msa1014510:intron | 35.0% |
| ! | AAATTGCTGCTTGTGAAAAG+TGG | + | chr7_1:23469722-23469741 | Msa1014510:intron | 35.0% |
| AACACATACCAACGAAAACA+AGG | - | chr7_1:23469268-23469287 | None:intergenic | 35.0% | |
| !! | TCGCAGGATGTTTTCTAAAA+TGG | + | chr7_1:23470174-23470193 | Msa1014510:intron | 35.0% |
| GATTTAGTCAGGATTAGAGT+TGG | + | chr7_1:23470209-23470228 | Msa1014510:intron | 35.0% | |
| ! | GAAAGCATATTGATGCTGAA+AGG | + | chr7_1:23470410-23470429 | Msa1014510:intron | 35.0% |
| TGCTATAAGCTTTCGATCTT+TGG | + | chr7_1:23470754-23470773 | Msa1014510:intron | 35.0% | |
| CGAAGAGTTGAAAGTTTATC+TGG | - | chr7_1:23471115-23471134 | None:intergenic | 35.0% | |
| ! | TCAACTCTTCGAATTTTACC+TGG | + | chr7_1:23471124-23471143 | Msa1014510:intron | 35.0% |
| ! | CAACTCTTCGAATTTTACCT+GGG | + | chr7_1:23471125-23471144 | Msa1014510:intron | 35.0% |
| ! | TATCAACATAGTGGAAAGAC+TGG | - | chr7_1:23471313-23471332 | None:intergenic | 35.0% |
| ! | AAGTTGGCTTATCAACATAG+TGG | - | chr7_1:23471322-23471341 | None:intergenic | 35.0% |
| TATCAAAATACATGTGGGAG+TGG | + | chr7_1:23471728-23471747 | Msa1014510:intron | 35.0% | |
| CAACTGACATCTAATTGGAT+TGG | - | chr7_1:23471847-23471866 | None:intergenic | 35.0% | |
| GACAACAACTGACATCTAAT+TGG | - | chr7_1:23471852-23471871 | None:intergenic | 35.0% | |
| AAACAGAGTCAGACATTTCA+AGG | + | chr7_1:23471933-23471952 | Msa1014510:CDS | 35.0% | |
| !! | TCAAGTTGATTTCGCATACT+CGG | - | chr7_1:23471965-23471984 | None:intergenic | 35.0% |
| ! | ATATTCTTAGATGAAGCGTC+TGG | + | chr7_1:23472329-23472348 | Msa1014510:intron | 35.0% |
| CCTAGTAGATAAATAGAGCA+AGG | - | chr7_1:23472628-23472647 | None:intergenic | 35.0% | |
| CCTTGCTCTATTTATCTACT+AGG | + | chr7_1:23472625-23472644 | Msa1014510:intron | 35.0% | |
| ATTTATCTACTAGGGGACTT+AGG | + | chr7_1:23472634-23472653 | Msa1014510:intron | 35.0% | |
| TTTATCTACTAGGGGACTTA+GGG | + | chr7_1:23472635-23472654 | Msa1014510:intron | 35.0% | |
| TGTTGTAACAAGTCTATACG+TGG | + | chr7_1:23472882-23472901 | Msa1014510:intron | 35.0% | |
| TAACAAGTCTATACGTGGTT+TGG | + | chr7_1:23472887-23472906 | Msa1014510:intron | 35.0% | |
| ! | TTTTTACGTGTCTCAATCAG+AGG | - | chr7_1:23473052-23473071 | None:intergenic | 35.0% |
| TTCCCATGTATTAACCCTTT+AGG | + | chr7_1:23473097-23473116 | Msa1014510:intron | 35.0% | |
| AGCCTAAAGGGTTAATACAT+GGG | - | chr7_1:23473102-23473121 | None:intergenic | 35.0% | |
| AAGCCTAAAGGGTTAATACA+TGG | - | chr7_1:23473103-23473122 | None:intergenic | 35.0% | |
| TATTAACCCTTTAGGCTTGA+AGG | + | chr7_1:23473105-23473124 | Msa1014510:intron | 35.0% | |
| ATTAACCCTTTAGGCTTGAA+GGG | + | chr7_1:23473106-23473125 | Msa1014510:intron | 35.0% | |
| ! | AAGATTGAGGTGTCAAGAAT+TGG | + | chr7_1:23473176-23473195 | Msa1014510:intron | 35.0% |
| ! | AGTTGGTTCATGATATGGTA+TGG | - | chr7_1:23473229-23473248 | None:intergenic | 35.0% |
| ! | GAGATAGTTGGTTCATGATA+TGG | - | chr7_1:23473234-23473253 | None:intergenic | 35.0% |
| !!! | GCTTAAGCTTTTGAGATAGT+TGG | - | chr7_1:23473246-23473265 | None:intergenic | 35.0% |
| ! | CAAAGTAGTCTTGCCATATA+TGG | - | chr7_1:23473317-23473336 | None:intergenic | 35.0% |
| CTTTGACTCTGATACCTTAA+TGG | + | chr7_1:23473332-23473351 | Msa1014510:intron | 35.0% | |
| TTATATGGCAACCGCAATTA+CGG | + | chr7_1:23473412-23473431 | Msa1014510:intron | 35.0% | |
| ! | AATTATTTGAGCTGGGCTTT+TGG | + | chr7_1:23473453-23473472 | Msa1014510:intron | 35.0% |
| ! | ATTATTTGAGCTGGGCTTTT+GGG | + | chr7_1:23473454-23473473 | Msa1014510:intron | 35.0% |
| GGCTATTCTCAATTCTAACA+AGG | + | chr7_1:23473486-23473505 | Msa1014510:intron | 35.0% | |
| AACTTACACAATGAGCAAAC+CGG | - | chr7_1:23473596-23473615 | None:intergenic | 35.0% | |
| ! | GTTTGGACATGAATCTTTTG+TGG | + | chr7_1:23473661-23473680 | Msa1014510:intron | 35.0% |
| ! | CAGATTTGAAGTACTTGATG+AGG | + | chr7_1:23473729-23473748 | Msa1014510:intron | 35.0% |
| TTTCCCAATAGGTTTACCTT+TGG | - | chr7_1:23473783-23473802 | None:intergenic | 35.0% | |
| GCACCAATAAGTCAAAATTG+AGG | - | chr7_1:23473960-23473979 | None:intergenic | 35.0% | |
| ! | GAAAAAATAGAGGCATGAGA+TGG | + | chr7_1:23474168-23474187 | Msa1014510:intron | 35.0% |
| ACCATGCACACTCTATAATT+TGG | + | chr7_1:23474213-23474232 | Msa1014510:intron | 35.0% | |
| TCCAAATTATAGAGTGTGCA+TGG | - | chr7_1:23474217-23474236 | None:intergenic | 35.0% | |
| TCCGTAATGTTGTATGAAAC+TGG | - | chr7_1:23474330-23474349 | None:intergenic | 35.0% | |
| CATTACGGATCATATAGTTG+TGG | + | chr7_1:23474341-23474360 | Msa1014510:intron | 35.0% | |
| AAAGGAATGATATGTCCCAT+TGG | - | chr7_1:23474563-23474582 | None:intergenic | 35.0% | |
| ! | CTTGATGGATCATTACTCTT+AGG | - | chr7_1:23474587-23474606 | None:intergenic | 35.0% |
| ! | TTTTCCAGGTGGAAAATCTT+GGG | - | chr7_1:23474612-23474631 | None:intergenic | 35.0% |
| TTATAAAGTGCAGTAGTTCC+TGG | - | chr7_1:23474653-23474672 | None:intergenic | 35.0% | |
| ACTACAAATTCATGGAAGCA+AGG | - | chr7_1:23474754-23474773 | None:intergenic | 35.0% | |
| TTCCTCACATGACATCAAAT+TGG | + | chr7_1:23474950-23474969 | Msa1014510:intron | 35.0% | |
| TTCCAATTTGATGTCATGTG+AGG | - | chr7_1:23474955-23474974 | None:intergenic | 35.0% | |
| ATGTCGACAACATCATTCAA+AGG | - | chr7_1:23475100-23475119 | None:intergenic | 35.0% | |
| CATATTGATCCCTAGACTTT+GGG | - | chr7_1:23475258-23475277 | None:intergenic | 35.0% | |
| TCATATTGATCCCTAGACTT+TGG | - | chr7_1:23475259-23475278 | None:intergenic | 35.0% | |
| CATTCTTCAAAAATTAGCCG+AGG | - | chr7_1:23475342-23475361 | None:intergenic | 35.0% | |
| ATTGCTTACTCTATGGTGAT+TGG | + | chr7_1:23475416-23475435 | Msa1014510:intron | 35.0% | |
| TGATTGGAACAGTTATGTGT+TGG | + | chr7_1:23475432-23475451 | Msa1014510:intron | 35.0% | |
| !! | TTTGATGATGACGAAGAAGA+CGG | + | chr7_1:23475457-23475476 | Msa1014510:CDS | 35.0% |
| ATTTATTGACGATGTCCTTC+TGG | - | chr7_1:23475529-23475548 | None:intergenic | 35.0% | |
| CTATCAAGGAAATTGCAATG+AGG | + | chr7_1:23475638-23475657 | Msa1014510:three_prime_UTR | 35.0% | |
| CATTCATACGTGCATAAAGT+TGG | - | chr7_1:23475664-23475683 | None:intergenic | 35.0% | |
| CAAAGGAATTGGATCGGTTA+AGG | + | chr7_1:23467973-23467992 | Msa1014510:CDS | 40.0% | |
| TTCATAAGCTCAACCCAAAC+GGG | - | chr7_1:23468542-23468561 | None:intergenic | 40.0% | |
| GACACTGCCGATATTGAATT+TGG | + | chr7_1:23468916-23468935 | Msa1014510:intron | 40.0% | |
| ! | TGTGTTTGAGTTTCAAGTGG+TGG | + | chr7_1:23468952-23468971 | Msa1014510:intron | 40.0% |
| !!! | GGTGGTTGTCATTTTGTCTA+CGG | + | chr7_1:23468970-23468989 | Msa1014510:intron | 40.0% |
| GAGTCATGAGTTTGTGAACA+AGG | + | chr7_1:23469025-23469044 | Msa1014510:intron | 40.0% | |
| AATCATCAACAGTGGCAACA+CGG | - | chr7_1:23469064-23469083 | None:intergenic | 40.0% | |
| TGTCACAACCAAAATTGTGG+TGG | + | chr7_1:23469157-23469176 | Msa1014510:intron | 40.0% | |
| TTGCGAATGCGATTGTGTTT+CGG | + | chr7_1:23469638-23469657 | Msa1014510:intron | 40.0% | |
| ! | AAAAGTGGTCAGCTTTAGTC+AGG | + | chr7_1:23469737-23469756 | Msa1014510:intron | 40.0% |
| ATTGATATTGCGGGGAATCA+TGG | + | chr7_1:23469905-23469924 | Msa1014510:intron | 40.0% | |
| ! | AGCCTCCAGTGAATTTTTCA+CGG | - | chr7_1:23469985-23470004 | None:intergenic | 40.0% |
| ! | TTGAAAGGTGTGGATCTTCA+CGG | - | chr7_1:23470011-23470030 | None:intergenic | 40.0% |
| GCTTGTGAACAGATTTAGTC+AGG | + | chr7_1:23470198-23470217 | Msa1014510:intron | 40.0% | |
| TGTTTCCACGCTTTATCTTG+TGG | + | chr7_1:23470436-23470455 | Msa1014510:intron | 40.0% | |
| !! | TCATTGGGAGCTTGTTAGAT+AGG | + | chr7_1:23470818-23470837 | Msa1014510:intron | 40.0% |
| TTTGCTAGTGAGTTATCTCC+AGG | - | chr7_1:23470982-23471001 | None:intergenic | 40.0% | |
| GACAAACCTAATCTTCTTCG+TGG | - | chr7_1:23471378-23471397 | None:intergenic | 40.0% | |
| ! | TATGACGTTTTGCAGCAATC+AGG | + | chr7_1:23471692-23471711 | Msa1014510:intron | 40.0% |
| GAGTATGCGAAATCAACTTG+AGG | + | chr7_1:23471964-23471983 | Msa1014510:CDS | 40.0% | |
| !!! | GTTTTGGCTTCTCACTTTTC+AGG | + | chr7_1:23472375-23472394 | Msa1014510:intron | 40.0% |
| ! | AGATCCCAAACTAGCAGTTT+TGG | + | chr7_1:23472758-23472777 | Msa1014510:intron | 40.0% |
| ! | GATCCCAAACTAGCAGTTTT+GGG | + | chr7_1:23472759-23472778 | Msa1014510:intron | 40.0% |
| ! | ACACCCAAAACTGCTAGTTT+GGG | - | chr7_1:23472765-23472784 | None:intergenic | 40.0% |
| TACACCCAAAACTGCTAGTT+TGG | - | chr7_1:23472766-23472785 | None:intergenic | 40.0% | |
| GTGTAACTAGTGCTAACATC+AGG | + | chr7_1:23472781-23472800 | Msa1014510:intron | 40.0% | |
| TCAATTGGTATGAGCTGTAC+TGG | - | chr7_1:23472812-23472831 | None:intergenic | 40.0% | |
| GACATGCCAGTCTTAGAATT+TGG | + | chr7_1:23472912-23472931 | Msa1014510:intron | 40.0% | |
| ! | CAACACCAGTAATTAGCTCT+AGG | + | chr7_1:23472947-23472966 | Msa1014510:intron | 40.0% |
| GCAAACCTAGAGCTAATTAC+TGG | - | chr7_1:23472955-23472974 | None:intergenic | 40.0% | |
| GAAGCAGAGTCTCTCAAATT+GGG | + | chr7_1:23473025-23473044 | Msa1014510:intron | 40.0% | |
| AGGTGTCAAGAATTGGAACT+CGG | + | chr7_1:23473183-23473202 | Msa1014510:intron | 40.0% | |
| GAATTGGAACTCGGATAACT+TGG | + | chr7_1:23473192-23473211 | Msa1014510:intron | 40.0% | |
| !!! | TGGGCTTTTGGGATTGAATT+TGG | + | chr7_1:23473465-23473484 | Msa1014510:intron | 40.0% |
| !! | ACCAATTGTTTGAGTTGCTC+CGG | + | chr7_1:23473574-23473593 | Msa1014510:intron | 40.0% |
| GTTGTTGCTCGTGTATGATT+TGG | + | chr7_1:23473613-23473632 | Msa1014510:intron | 40.0% | |
| TGGCCAAAGGTAAACCTATT+GGG | + | chr7_1:23473777-23473796 | Msa1014510:intron | 40.0% | |
| GTTTACAACGGTTGTGTTGT+TGG | + | chr7_1:23473819-23473838 | Msa1014510:intron | 40.0% | |
| ATCAACCAACACTTGACGTT+AGG | + | chr7_1:23473913-23473932 | Msa1014510:intron | 40.0% | |
| TGGACACACAAGACATGATA+CGG | - | chr7_1:23474095-23474114 | None:intergenic | 40.0% | |
| AAGGAAGTTTCGGATGCAAT+TGG | - | chr7_1:23474410-23474429 | None:intergenic | 40.0% | |
| AGACAGTACAAGCTTCCAAT+GGG | + | chr7_1:23474545-23474564 | Msa1014510:intron | 40.0% | |
| GGATCATTACTCTTAGGGAA+AGG | - | chr7_1:23474581-23474600 | None:intergenic | 40.0% | |
| ! | GTTTTCCAGGTGGAAAATCT+TGG | - | chr7_1:23474613-23474632 | None:intergenic | 40.0% |
| AGAGAATTATTACCCTGCGA+TGG | - | chr7_1:23474694-23474713 | None:intergenic | 40.0% | |
| ATCATATCACTATTGCGCAG+AGG | + | chr7_1:23474863-23474882 | Msa1014510:intron | 40.0% | |
| !! | TTGATGATGACGAAGAAGAC+GGG | + | chr7_1:23475458-23475477 | Msa1014510:CDS | 40.0% |
| TGTAAAATGCACGTACGAGT+TGG | + | chr7_1:23475863-23475882 | Msa1014510:three_prime_UTR | 40.0% | |
| ! | TACGAGTTGGCCTAACATTA+AGG | + | chr7_1:23475876-23475895 | Msa1014510:three_prime_UTR | 40.0% |
| TGATAGCTTATGTCCCCGTT+TGG | + | chr7_1:23468525-23468544 | Msa1014510:intron | 45.0% | |
| GATAGCTTATGTCCCCGTTT+GGG | + | chr7_1:23468526-23468545 | Msa1014510:intron | 45.0% | |
| TCATAAGCTCAACCCAAACG+GGG | - | chr7_1:23468541-23468560 | None:intergenic | 45.0% | |
| TAGCTTACATAGGGTCCGTT+TGG | - | chr7_1:23468724-23468743 | None:intergenic | 45.0% | |
| GTAAGCGCTTGTGCTATACA+CGG | + | chr7_1:23468764-23468783 | Msa1014510:intron | 45.0% | |
| AGCTAACTGCGATCACGTTT+CGG | + | chr7_1:23469110-23469129 | Msa1014510:intron | 45.0% | |
| ACATTCTGCGACCGCAATTT+CGG | - | chr7_1:23469435-23469454 | None:intergenic | 45.0% | |
| ATGCGATTGTGTTTCGGTTG+TGG | + | chr7_1:23469644-23469663 | Msa1014510:intron | 45.0% | |
| ATAGTCTACAACTGCGACTG+TGG | - | chr7_1:23469697-23469716 | None:intergenic | 45.0% | |
| TCATGGTCCCATATGGCTAA+TGG | + | chr7_1:23469922-23469941 | Msa1014510:intron | 45.0% | |
| ! | CAGTGAATTTTTCACGGGAG+AGG | - | chr7_1:23469979-23469998 | None:intergenic | 45.0% |
| CTCTCCCGTGAAAAATTCAC+TGG | + | chr7_1:23469977-23469996 | Msa1014510:intron | 45.0% | |
| TCCCGTGAAAAATTCACTGG+AGG | + | chr7_1:23469980-23469999 | Msa1014510:intron | 45.0% | |
| ! | GCCTCCAGTGAATTTTTCAC+GGG | - | chr7_1:23469984-23470003 | None:intergenic | 45.0% |
| ! | TGAAAGGTGTGGATCTTCAC+GGG | - | chr7_1:23470010-23470029 | None:intergenic | 45.0% |
| TCACTGCACACACTTTACAC+TGG | + | chr7_1:23470090-23470109 | Msa1014510:intron | 45.0% | |
| ! | ATTTTTGATGCGACCACGAC+CGG | - | chr7_1:23470129-23470148 | None:intergenic | 45.0% |
| TGATGTCAGAGCCACAATTG+CGG | + | chr7_1:23470151-23470170 | Msa1014510:intron | 45.0% | |
| CCACACATACCAACGAAACA+AGG | - | chr7_1:23470250-23470269 | None:intergenic | 45.0% | |
| ! | CCTTGTTTCGTTGGTATGTG+TGG | + | chr7_1:23470247-23470266 | Msa1014510:intron | 45.0% |
| TTCGTCCACAAGATAAAGCG+TGG | - | chr7_1:23470444-23470463 | None:intergenic | 45.0% | |
| TGCTTGCATGCTTCCTCTAA+AGG | + | chr7_1:23470542-23470561 | Msa1014510:intron | 45.0% | |
| GCTTGCATGCTTCCTCTAAA+GGG | + | chr7_1:23470543-23470562 | Msa1014510:intron | 45.0% | |
| TTTCGATGTAGCTCCTGAAG+TGG | + | chr7_1:23470948-23470967 | Msa1014510:intron | 45.0% | |
| TGTGAATCTGAGTTAGACCC+AGG | - | chr7_1:23471145-23471164 | None:intergenic | 45.0% | |
| GAGGAAGCAAGACATCAAGT+TGG | - | chr7_1:23471338-23471357 | None:intergenic | 45.0% | |
| ACTTGATGTCTTGCTTCCTC+CGG | + | chr7_1:23471338-23471357 | Msa1014510:CDS | 45.0% | |
| GGACAACCACGAAGAAGATT+AGG | + | chr7_1:23471369-23471388 | Msa1014510:CDS | 45.0% | |
| ! | AAATAGAGGTGTGGTGTGCT+AGG | + | chr7_1:23471591-23471610 | Msa1014510:intron | 45.0% |
| CAGAAGGCAATGAGCAGAAA+AGG | + | chr7_1:23471900-23471919 | Msa1014510:intron | 45.0% | |
| !!! | TCACTTTTCAGGTAGCAGCT+AGG | + | chr7_1:23472386-23472405 | Msa1014510:intron | 45.0% |
| !!! | CACTTTTCAGGTAGCAGCTA+GGG | + | chr7_1:23472387-23472406 | Msa1014510:intron | 45.0% |
| GTAATGCGGATAAGGACGAA+TGG | + | chr7_1:23472419-23472438 | Msa1014510:CDS | 45.0% | |
| GCCAGTCTTAGAATTTGGCT+AGG | + | chr7_1:23472917-23472936 | Msa1014510:intron | 45.0% | |
| !! | GCCTAGCCAAATTCTAAGAC+TGG | - | chr7_1:23472921-23472940 | None:intergenic | 45.0% |
| GGAAGCAGAGTCTCTCAAAT+TGG | + | chr7_1:23473024-23473043 | Msa1014510:intron | 45.0% | |
| GTTCACCCTTCAAGCCTAAA+GGG | - | chr7_1:23473114-23473133 | None:intergenic | 45.0% | |
| TGTTCACCCTTCAAGCCTAA+AGG | - | chr7_1:23473115-23473134 | None:intergenic | 45.0% | |
| CTCGGATAACTTGGTTGTAG+AGG | + | chr7_1:23473201-23473220 | Msa1014510:intron | 45.0% | |
| GACAATCACAAACTCTCCTC+AGG | + | chr7_1:23473508-23473527 | Msa1014510:intron | 45.0% | |
| GTTAGTCACCCATGCATACT+GGG | - | chr7_1:23473535-23473554 | None:intergenic | 45.0% | |
| AGTTAGTCACCCATGCATAC+TGG | - | chr7_1:23473536-23473555 | None:intergenic | 45.0% | |
| ACCGGAGCAACTCAAACAAT+TGG | - | chr7_1:23473578-23473597 | None:intergenic | 45.0% | |
| ! | GAAGTACTTGATGAGGAACC+TGG | + | chr7_1:23473736-23473755 | Msa1014510:CDS | 45.0% |
| CTGATGTCTTCATCATCACC+AGG | - | chr7_1:23473757-23473776 | None:intergenic | 45.0% | |
| ! | GGTGATGATGAAGACATCAG+TGG | + | chr7_1:23473757-23473776 | Msa1014510:CDS | 45.0% |
| ATGAAGACATCAGTGGCCAA+AGG | + | chr7_1:23473764-23473783 | Msa1014510:CDS | 45.0% | |
| GTGGCCAAAGGTAAACCTAT+TGG | + | chr7_1:23473776-23473795 | Msa1014510:intron | 45.0% | |
| ACAGACCTAACGTCAAGTGT+TGG | - | chr7_1:23473921-23473940 | None:intergenic | 45.0% | |
| GTAGAGTAGACTCTTGCCTT+CGG | - | chr7_1:23474016-23474035 | None:intergenic | 45.0% | |
| GTCTTGTGTGTCCACCAATT+TGG | + | chr7_1:23474101-23474120 | Msa1014510:intron | 45.0% | |
| CAGACAGTACAAGCTTCCAA+TGG | + | chr7_1:23474544-23474563 | Msa1014510:intron | 45.0% | |
| GGAAAATCTTGGGCACTTGA+TGG | - | chr7_1:23474602-23474621 | None:intergenic | 45.0% | |
| TCCACCTGGAAAACATGTCT+TGG | + | chr7_1:23474619-23474638 | Msa1014510:CDS | 45.0% | |
| ! | ACTGCCAAGACATGTTTTCC+AGG | - | chr7_1:23474626-23474645 | None:intergenic | 45.0% |
| CATGTCTTGGCAGTTTATCC+AGG | + | chr7_1:23474632-23474651 | Msa1014510:CDS | 45.0% | |
| CTATTTCCCTTCATAGGGTG+CGG | + | chr7_1:23474712-23474731 | Msa1014510:intron | 45.0% | |
| CATCGAACTTACATGTGGCA+TGG | - | chr7_1:23474788-23474807 | None:intergenic | 45.0% | |
| GGAGTCATCGAACTTACATG+TGG | - | chr7_1:23474793-23474812 | None:intergenic | 45.0% | |
| TGCTAATGTGCCCAAAGTCT+AGG | + | chr7_1:23475245-23475264 | Msa1014510:intron | 45.0% | |
| GCTAATGTGCCCAAAGTCTA+GGG | + | chr7_1:23475246-23475265 | Msa1014510:intron | 45.0% | |
| TCAGGAACTGATGTATCCCT+CGG | + | chr7_1:23475322-23475341 | Msa1014510:intron | 45.0% | |
| ATGTTTAGGCAATGGGGATG+TGG | - | chr7_1:23475766-23475785 | None:intergenic | 45.0% | |
| !! | AATTAAAAAAGTTATTAAAT+TGG | + | chr7_1:23471474-23471493 | Msa1014510:intron | 5.0% |
| !! | ATTAAAAAAGTTATTAAATT+GGG | + | chr7_1:23471475-23471494 | Msa1014510:intron | 5.0% |
| CGGGGACATAAGCTATCATG+CGG | - | chr7_1:23468523-23468542 | None:intergenic | 50.0% | |
| TCGGCAGTGTCAGTTGAGTT+AGG | - | chr7_1:23468907-23468926 | None:intergenic | 50.0% | |
| ! | ACAGCACGCCACCACAATTT+TGG | - | chr7_1:23469168-23469187 | None:intergenic | 50.0% |
| !!! | GTGGTGGCGTGCTGTTTTTT+TGG | + | chr7_1:23469173-23469192 | Msa1014510:intron | 50.0% |
| GGCTGTTTGTGATCGCGTTT+CGG | + | chr7_1:23469377-23469396 | Msa1014510:intron | 50.0% | |
| TTGTGATCGCGTTTCGGTTG+TGG | + | chr7_1:23469383-23469402 | Msa1014510:intron | 50.0% | |
| TGATGTCGGAGCCGAAATTG+CGG | + | chr7_1:23469421-23469440 | Msa1014510:intron | 50.0% | |
| GCGGTCACCATTAGCCATAT+GGG | - | chr7_1:23469932-23469951 | None:intergenic | 50.0% | |
| ! | TTTTTGATGCGACCACGACC+GGG | - | chr7_1:23470128-23470147 | None:intergenic | 50.0% |
| CTTGATGTCTTGCTTCCTCC+GGG | + | chr7_1:23471339-23471358 | Msa1014510:CDS | 50.0% | |
| CTTCTTCGTGGTTGTCCTTG+CGG | - | chr7_1:23471366-23471385 | None:intergenic | 50.0% | |
| TGAGGCTTGTGCCAGTCTTA+AGG | + | chr7_1:23471982-23472001 | Msa1014510:CDS | 50.0% | |
| GAGGCTTGTGCCAGTCTTAA+GGG | + | chr7_1:23471983-23472002 | Msa1014510:CDS | 50.0% | |
| TGCCAGTCTTAAGGGTGAAC+AGG | + | chr7_1:23471991-23472010 | Msa1014510:CDS | 50.0% | |
| TGCCTGTTCACCCTTAAGAC+TGG | - | chr7_1:23471996-23472015 | None:intergenic | 50.0% | |
| TAGGGTCACACCACGTAATG+CGG | + | chr7_1:23472405-23472424 | Msa1014510:CDS | 50.0% | |
| CACACCACGTAATGCGGATA+AGG | + | chr7_1:23472411-23472430 | Msa1014510:CDS | 50.0% | |
| TCGTCCTTATCCGCATTACG+TGG | - | chr7_1:23472418-23472437 | None:intergenic | 50.0% | |
| CTACTAGGGGACTTAGGGTA+AGG | + | chr7_1:23472640-23472659 | Msa1014510:intron | 50.0% | |
| AGGCGGGTAGAGGTTTAACA+TGG | + | chr7_1:23473003-23473022 | Msa1014510:intron | 50.0% | |
| GGCATGAGATGGTGAAACTG+TGG | + | chr7_1:23474179-23474198 | Msa1014510:intron | 50.0% | |
| ! | AGTGCCCAAGATTTTCCACC+TGG | + | chr7_1:23474605-23474624 | Msa1014510:CDS | 50.0% |
| ! | GCCAAGACATGTTTTCCAGG+TGG | - | chr7_1:23474623-23474642 | None:intergenic | 50.0% |
| AGTTGTTCAAGGCCATCGCA+GGG | + | chr7_1:23474679-23474698 | Msa1014510:CDS | 50.0% | |
| AAGTGACCGCACCCTATGAA+GGG | - | chr7_1:23474721-23474740 | None:intergenic | 50.0% | |
| TAAGTGACCGCACCCTATGA+AGG | - | chr7_1:23474722-23474741 | None:intergenic | 50.0% | |
| AAGACGGGTCTCTACCTCAA+AGG | + | chr7_1:23475473-23475492 | Msa1014510:CDS | 50.0% | |
| AGAGGAACCACTGTGTGGAA+GGG | - | chr7_1:23475505-23475524 | None:intergenic | 50.0% | |
| CTGCGATCACGTTTCGGTTG+TGG | + | chr7_1:23469116-23469135 | Msa1014510:intron | 55.0% | |
| CGGGGAATCATGGTCCCATA+TGG | + | chr7_1:23469915-23469934 | Msa1014510:intron | 55.0% | |
| CGCGGTCACCATTAGCCATA+TGG | - | chr7_1:23469933-23469952 | None:intergenic | 55.0% | |
| ! | GGCTAATGGTGACCGCGTTT+TGG | + | chr7_1:23469936-23469955 | Msa1014510:intron | 55.0% |
| TACCCTCCACGACCAAAACG+CGG | - | chr7_1:23469951-23469970 | None:intergenic | 55.0% | |
| CACTGGAGAGAATCTCCTCC+CGG | + | chr7_1:23470107-23470126 | Msa1014510:intron | 55.0% | |
| ACATCCTGCGACCGCAATTG+TGG | - | chr7_1:23470165-23470184 | None:intergenic | 55.0% | |
| CCAGGCTTCTCAACCACTTC+AGG | - | chr7_1:23470964-23470983 | None:intergenic | 55.0% | |
| CCTGAAGTGGTTGAGAAGCC+TGG | + | chr7_1:23470961-23470980 | Msa1014510:CDS | 55.0% | |
| GGTTTGCCTTCTGCAGTCCA+AGG | + | chr7_1:23472968-23472987 | Msa1014510:intron | 55.0% | |
| TTGCCTTCTGCAGTCCAAGG+TGG | + | chr7_1:23472971-23472990 | Msa1014510:intron | 55.0% | |
| TGCCTTCTGCAGTCCAAGGT+GGG | + | chr7_1:23472972-23472991 | Msa1014510:intron | 55.0% | |
| ATGGACCGCAGCCGTAATTG+CGG | - | chr7_1:23473426-23473445 | None:intergenic | 55.0% | |
| TCCTCAGGACCCAGTATGCA+TGG | + | chr7_1:23473523-23473542 | Msa1014510:intron | 55.0% | |
| CCTCAGGACCCAGTATGCAT+GGG | + | chr7_1:23473524-23473543 | Msa1014510:intron | 55.0% | |
| GAGTAGACTCTTGCCTTCGG+TGG | - | chr7_1:23474013-23474032 | None:intergenic | 55.0% | |
| CAGTTGTTCAAGGCCATCGC+AGG | + | chr7_1:23474678-23474697 | Msa1014510:CDS | 55.0% | |
| !! | TGGAAGGGCACTGTCCTTTG+AGG | - | chr7_1:23475490-23475509 | None:intergenic | 55.0% |
| CAGAGGAACCACTGTGTGGA+AGG | - | chr7_1:23475506-23475525 | None:intergenic | 55.0% | |
| ACAGTGGTTCCTCTGCCAGA+AGG | + | chr7_1:23475511-23475530 | Msa1014510:CDS | 55.0% | |
| TGACGATGTCCTTCTGGCAG+AGG | - | chr7_1:23475523-23475542 | None:intergenic | 55.0% | |
| !! | TGGTGACCGCGTTTTGGTCG+TGG | + | chr7_1:23469942-23469961 | Msa1014510:intron | 60.0% |
| !! | TGACCGCGTTTTGGTCGTGG+AGG | + | chr7_1:23469945-23469964 | Msa1014510:intron | 60.0% |
| !! | GACCGCGTTTTGGTCGTGGA+GGG | + | chr7_1:23469946-23469965 | Msa1014510:intron | 60.0% |
| AGAGAATCTCCTCCCGGTCG+TGG | + | chr7_1:23470113-23470132 | Msa1014510:intron | 60.0% | |
| AGAGCCACAATTGCGGTCGC+AGG | + | chr7_1:23470158-23470177 | Msa1014510:intron | 60.0% | |
| GTCCAAGGTGGGCGCAATGA+AGG | + | chr7_1:23472983-23473002 | Msa1014510:intron | 60.0% | |
| CAAGGTGGGCGCAATGAAGG+CGG | + | chr7_1:23472986-23473005 | Msa1014510:intron | 60.0% | |
| AAGGTGGGCGCAATGAAGGC+GGG | + | chr7_1:23472987-23473006 | Msa1014510:intron | 60.0% | |
| GGCAACCGCAATTACGGCTG+CGG | + | chr7_1:23473418-23473437 | Msa1014510:intron | 60.0% | |
| CCCATGCATACTGGGTCCTG+AGG | - | chr7_1:23473527-23473546 | None:intergenic | 60.0% | |
| CTGCATGCGAAAGCCACCGA+AGG | + | chr7_1:23473997-23474016 | Msa1014510:intron | 60.0% | |
| GACAGTGCCCTTCCACACAG+TGG | + | chr7_1:23475495-23475514 | Msa1014510:CDS | 60.0% | |
| CTGGCAGAGGAACCACTGTG+TGG | - | chr7_1:23475510-23475529 | None:intergenic | 60.0% | |
| TTGATGCGACCACGACCGGG+AGG | - | chr7_1:23470125-23470144 | None:intergenic | 65.0% | |
| TTGCTTCCTCCGGGACCGCA+AGG | + | chr7_1:23471348-23471367 | Msa1014510:CDS | 65.0% | |
| CGTGGTTGTCCTTGCGGTCC+CGG | - | chr7_1:23471360-23471379 | None:intergenic | 65.0% | |
| CGCCCACCTTGGACTGCAGA+AGG | - | chr7_1:23472977-23472996 | None:intergenic | 65.0% | |
| CGCCTTCATTGCGCCCACCT+TGG | - | chr7_1:23472988-23473007 | None:intergenic | 65.0% | |
| GGCGCAATGAAGGCGGGTAG+AGG | + | chr7_1:23472993-23473012 | Msa1014510:intron | 65.0% | |
| GGTTGTCCTTGCGGTCCCGG+AGG | - | chr7_1:23471357-23471376 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 23467668 | 23475934 | 23467668 | ID=Msa1014510;Name=Msa1014510 |
| chr7_1 | mRNA | 23467668 | 23475934 | 23467668 | ID=Msa1014510-mRNA-1;Parent=Msa1014510;Name=Msa1014510-mRNA-1;_AED=0.12;_eAED=0.12;_QI=262|0.77|0.8|0.9|0.77|0.9|10|388|282 |
| chr7_1 | exon | 23467668 | 23468053 | 23467668 | ID=Msa1014510-mRNA-1:exon:5428;Parent=Msa1014510-mRNA-1 |
| chr7_1 | exon | 23470959 | 23471052 | 23470959 | ID=Msa1014510-mRNA-1:exon:5429;Parent=Msa1014510-mRNA-1 |
| chr7_1 | exon | 23471314 | 23471390 | 23471314 | ID=Msa1014510-mRNA-1:exon:5430;Parent=Msa1014510-mRNA-1 |
| chr7_1 | exon | 23471903 | 23472016 | 23471903 | ID=Msa1014510-mRNA-1:exon:5431;Parent=Msa1014510-mRNA-1 |
| chr7_1 | exon | 23472131 | 23472159 | 23472131 | ID=Msa1014510-mRNA-1:exon:5432;Parent=Msa1014510-mRNA-1 |
| chr7_1 | exon | 23472397 | 23472482 | 23472397 | ID=Msa1014510-mRNA-1:exon:5433;Parent=Msa1014510-mRNA-1 |
| chr7_1 | exon | 23473732 | 23473785 | 23473732 | ID=Msa1014510-mRNA-1:exon:5434;Parent=Msa1014510-mRNA-1 |
| chr7_1 | exon | 23474547 | 23474700 | 23474547 | ID=Msa1014510-mRNA-1:exon:5435;Parent=Msa1014510-mRNA-1 |
| chr7_1 | exon | 23474883 | 23474896 | 23474883 | ID=Msa1014510-mRNA-1:exon:5436;Parent=Msa1014510-mRNA-1 |
| chr7_1 | exon | 23475444 | 23475934 | 23475444 | ID=Msa1014510-mRNA-1:exon:5437;Parent=Msa1014510-mRNA-1 |
| chr7_1 | five_prime_UTR | 23467668 | 23467929 | 23467668 | ID=Msa1014510-mRNA-1:five_prime_utr;Parent=Msa1014510-mRNA-1 |
| chr7_1 | CDS | 23467930 | 23468053 | 23467930 | ID=Msa1014510-mRNA-1:cds;Parent=Msa1014510-mRNA-1 |
| chr7_1 | CDS | 23470959 | 23471052 | 23470959 | ID=Msa1014510-mRNA-1:cds;Parent=Msa1014510-mRNA-1 |
| chr7_1 | CDS | 23471314 | 23471390 | 23471314 | ID=Msa1014510-mRNA-1:cds;Parent=Msa1014510-mRNA-1 |
| chr7_1 | CDS | 23471903 | 23472016 | 23471903 | ID=Msa1014510-mRNA-1:cds;Parent=Msa1014510-mRNA-1 |
| chr7_1 | CDS | 23472131 | 23472159 | 23472131 | ID=Msa1014510-mRNA-1:cds;Parent=Msa1014510-mRNA-1 |
| chr7_1 | CDS | 23472397 | 23472482 | 23472397 | ID=Msa1014510-mRNA-1:cds;Parent=Msa1014510-mRNA-1 |
| chr7_1 | CDS | 23473732 | 23473785 | 23473732 | ID=Msa1014510-mRNA-1:cds;Parent=Msa1014510-mRNA-1 |
| chr7_1 | CDS | 23474547 | 23474700 | 23474547 | ID=Msa1014510-mRNA-1:cds;Parent=Msa1014510-mRNA-1 |
| chr7_1 | CDS | 23474883 | 23474896 | 23474883 | ID=Msa1014510-mRNA-1:cds;Parent=Msa1014510-mRNA-1 |
| chr7_1 | CDS | 23475444 | 23475546 | 23475444 | ID=Msa1014510-mRNA-1:cds;Parent=Msa1014510-mRNA-1 |
| chr7_1 | three_prime_UTR | 23475547 | 23475934 | 23475547 | ID=Msa1014510-mRNA-1:three_prime_utr;Parent=Msa1014510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
