Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0189930 | XP_003593243.1 | 96.296 | 243 | 6 | 1 | 1 | 240 | 1 | 243 | 6.65e-171 | 482 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0189930 | G7IPM1 | 96.296 | 243 | 6 | 1 | 1 | 240 | 1 | 243 | 3.17e-171 | 482 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011660 | Msa0189930 | 0.809935 | 1.479301e-50 | -8.615850e-47 |
| Msa0032470 | Msa0189930 | -0.821808 | 3.315432e-53 | -8.615850e-47 |
| Msa0036140 | Msa0189930 | -0.801086 | 1.062659e-48 | -8.615850e-47 |
| Msa0044260 | Msa0189930 | -0.810406 | 1.170907e-50 | -8.615850e-47 |
| Msa0044330 | Msa0189930 | -0.812468 | 4.175748e-51 | -8.615850e-47 |
| Msa0065680 | Msa0189930 | 0.848341 | 6.518750e-60 | -8.615850e-47 |
| Msa0087800 | Msa0189930 | -0.820378 | 7.081712e-53 | -8.615850e-47 |
| Msa0089750 | Msa0189930 | -0.823451 | 1.375746e-53 | -8.615850e-47 |
| Msa0089820 | Msa0189930 | -0.806787 | 6.941175e-50 | -8.615850e-47 |
| Msa0100160 | Msa0189930 | -0.809160 | 2.171087e-50 | -8.615850e-47 |
| Msa0104230 | Msa0189930 | -0.800093 | 1.694337e-48 | -8.615850e-47 |
| Msa0104670 | Msa0189930 | -0.803360 | 3.617703e-49 | -8.615850e-47 |
| Msa0104800 | Msa0189930 | -0.806304 | 8.777352e-50 | -8.615850e-47 |
| Msa0106620 | Msa0189930 | -0.805751 | 1.147281e-49 | -8.615850e-47 |
| Msa0106710 | Msa0189930 | -0.819268 | 1.269808e-52 | -8.615850e-47 |
| Msa0140500 | Msa0189930 | 0.852715 | 3.847692e-61 | -8.615850e-47 |
| Msa0150230 | Msa0189930 | -0.814592 | 1.424690e-51 | -8.615850e-47 |
| Msa0150860 | Msa0189930 | -0.818832 | 1.595369e-52 | -8.615850e-47 |
| Msa0154840 | Msa0189930 | 0.830978 | 2.165163e-55 | -8.615850e-47 |
| Msa0167980 | Msa0189930 | -0.802423 | 5.650984e-49 | -8.615850e-47 |
| Msa0178510 | Msa0189930 | -0.803012 | 4.270688e-49 | -8.615850e-47 |
| Msa0186950 | Msa0189930 | -0.825943 | 3.557679e-54 | -8.615850e-47 |
| Msa0189040 | Msa0189930 | -0.808853 | 2.524616e-50 | -8.615850e-47 |
| Msa0189930 | Msa0219590 | -0.808074 | 3.703039e-50 | -8.615850e-47 |
| Msa0189930 | Msa0225100 | -0.800710 | 1.268395e-48 | -8.615850e-47 |
| Msa0189930 | Msa0225220 | -0.802881 | 4.545117e-49 | -8.615850e-47 |
| Msa0189930 | Msa0236510 | 0.811731 | 6.044905e-51 | -8.615850e-47 |
| Msa0189930 | Msa0241140 | -0.843538 | 1.317875e-58 | -8.615850e-47 |
| Msa0189930 | Msa0274980 | -0.802488 | 5.478076e-49 | -8.615850e-47 |
| Msa0189930 | Msa0278570 | -0.815880 | 7.370887e-52 | -8.615850e-47 |
| Msa0189930 | Msa0287740 | -0.801852 | 7.403802e-49 | -8.615850e-47 |
| Msa0189930 | Msa0317520 | -0.803063 | 4.169042e-49 | -8.615850e-47 |
| Msa0189930 | Msa0326750 | -0.804595 | 2.003057e-49 | -8.615850e-47 |
| Msa0189930 | Msa0336310 | -0.811551 | 6.614830e-51 | -8.615850e-47 |
| Msa0189930 | Msa0336320 | -0.808106 | 3.645313e-50 | -8.615850e-47 |
| Msa0189930 | Msa0342010 | -0.810209 | 1.291755e-50 | -8.615850e-47 |
| Msa0189930 | Msa0359030 | -0.803588 | 3.245175e-49 | -8.615850e-47 |
| Msa0189930 | Msa0363790 | -0.800510 | 1.393613e-48 | -8.615850e-47 |
| Msa0189930 | Msa0365100 | -0.829895 | 3.985339e-55 | -8.615850e-47 |
| Msa0189930 | Msa0367870 | -0.818557 | 1.842033e-52 | -8.615850e-47 |
| Msa0189930 | Msa0381610 | 0.841786 | 3.847381e-58 | -8.615850e-47 |
| Msa0189930 | Msa0412840 | -0.800181 | 1.625814e-48 | -8.615850e-47 |
| Msa0189930 | Msa0413410 | -0.807497 | 4.911632e-50 | -8.615850e-47 |
| Msa0189930 | Msa0427100 | -0.822831 | 1.919257e-53 | -8.615850e-47 |
| Msa0189930 | Msa0427120 | -0.833269 | 5.876260e-56 | -8.615850e-47 |
| Msa0189930 | Msa0450400 | 0.822268 | 2.594250e-53 | -8.615850e-47 |
| Msa0189930 | Msa0452710 | -0.800622 | 1.322182e-48 | -8.615850e-47 |
| Msa0189930 | Msa0460590 | -0.836580 | 8.610992e-57 | -8.615850e-47 |
| Msa0189930 | Msa0473500 | -0.806085 | 9.762265e-50 | -8.615850e-47 |
| Msa0189930 | Msa0518380 | -0.810682 | 1.020787e-50 | -8.615850e-47 |
| Msa0189930 | Msa0521740 | -0.803390 | 3.566815e-49 | -8.615850e-47 |
| Msa0189930 | Msa0532980 | -0.807316 | 5.365657e-50 | -8.615850e-47 |
| Msa0189930 | Msa0538910 | -0.803946 | 2.734456e-49 | -8.615850e-47 |
| Msa0189930 | Msa0558370 | -0.808625 | 2.825325e-50 | -8.615850e-47 |
| Msa0189930 | Msa0574390 | -0.836782 | 7.647853e-57 | -8.615850e-47 |
| Msa0189930 | Msa0583360 | 0.803390 | 3.566815e-49 | -8.615850e-47 |
| Msa0189930 | Msa0613110 | -0.806443 | 8.206370e-50 | -8.615850e-47 |
| Msa0189930 | Msa0613120 | -0.808802 | 2.589644e-50 | -8.615850e-47 |
| Msa0189930 | Msa0616620 | 0.814008 | 1.916749e-51 | -8.615850e-47 |
| Msa0189930 | Msa0618970 | -0.800673 | 1.290505e-48 | -8.615850e-47 |
| Msa0189930 | Msa0622170 | 0.802297 | 5.998792e-49 | -8.615850e-47 |
| Msa0189930 | Msa0703780 | -0.833745 | 4.470084e-56 | -8.615850e-47 |
| Msa0189930 | Msa0707250 | -0.806381 | 8.454919e-50 | -8.615850e-47 |
| Msa0189930 | Msa0711150 | -0.807903 | 4.026979e-50 | -8.615850e-47 |
| Msa0189930 | Msa0721280 | -0.800929 | 1.144391e-48 | -8.615850e-47 |
| Msa0189930 | Msa0724480 | -0.806112 | 9.633642e-50 | -8.615850e-47 |
| Msa0189930 | Msa0740510 | -0.800174 | 1.631097e-48 | -8.615850e-47 |
| Msa0189930 | Msa0749440 | -0.822056 | 2.904572e-53 | -8.615850e-47 |
| Msa0189930 | Msa0750850 | -0.804998 | 1.650107e-49 | -8.615850e-47 |
| Msa0189930 | Msa0751850 | -0.819291 | 1.254799e-52 | -8.615850e-47 |
| Msa0189930 | Msa0755050 | -0.807626 | 4.612033e-50 | -8.615850e-47 |
| Msa0189930 | Msa0760130 | -0.813002 | 3.190187e-51 | -8.615850e-47 |
| Msa0189930 | Msa0763890 | -0.802496 | 5.458464e-49 | -8.615850e-47 |
| Msa0189930 | Msa0784480 | -0.818017 | 2.441340e-52 | -8.615850e-47 |
| Msa0189930 | Msa0795370 | -0.802852 | 4.607998e-49 | -8.615850e-47 |
| Msa0189930 | Msa0797250 | -0.809118 | 2.216061e-50 | -8.615850e-47 |
| Msa0189930 | Msa0817460 | -0.845728 | 3.388453e-59 | -8.615850e-47 |
| Msa0189930 | Msa0820850 | -0.804895 | 1.733871e-49 | -8.615850e-47 |
| Msa0189930 | Msa0822310 | 0.811770 | 5.927804e-51 | -8.615850e-47 |
| Msa0189930 | Msa0822500 | -0.814252 | 1.693994e-51 | -8.615850e-47 |
| Msa0189930 | Msa0831850 | -0.815823 | 7.586815e-52 | -8.615850e-47 |
| Msa0189930 | Msa0832340 | -0.817022 | 4.090651e-52 | -8.615850e-47 |
| Msa0189930 | Msa0844490 | -0.816523 | 5.293563e-52 | -8.615850e-47 |
| Msa0189930 | Msa0861090 | -0.804006 | 2.656574e-49 | -8.615850e-47 |
| Msa0189930 | Msa0861130 | -0.800815 | 1.207558e-48 | -8.615850e-47 |
| Msa0189930 | Msa0866410 | -0.810064 | 1.388147e-50 | -8.615850e-47 |
| Msa0189930 | Msa0878220 | -0.811289 | 7.543492e-51 | -8.615850e-47 |
| Msa0189930 | Msa0894710 | -0.811672 | 6.227336e-51 | -8.615850e-47 |
| Msa0189930 | Msa0897330 | -0.813769 | 2.164224e-51 | -8.615850e-47 |
| Msa0189930 | Msa0898750 | -0.809398 | 1.930130e-50 | -8.615850e-47 |
| Msa0189930 | Msa0902830 | -0.826059 | 3.339132e-54 | -8.615850e-47 |
| Msa0189930 | Msa0926370 | -0.809112 | 2.222892e-50 | -8.615850e-47 |
| Msa0189930 | Msa0928130 | -0.812094 | 5.039685e-51 | -8.615850e-47 |
| Msa0189930 | Msa0946280 | 0.811808 | 5.816616e-51 | -8.615850e-47 |
| Msa0189930 | Msa0962840 | -0.813521 | 2.453676e-51 | -8.615850e-47 |
| Msa0189930 | Msa0964310 | -0.801825 | 7.500663e-49 | -8.615850e-47 |
| Msa0189930 | Msa0969520 | -0.808640 | 2.803744e-50 | -8.615850e-47 |
| Msa0189930 | Msa0980200 | -0.808082 | 3.688424e-50 | -8.615850e-47 |
| Msa0189930 | Msa1001390 | -0.822662 | 2.101654e-53 | -8.615850e-47 |
| Msa0189930 | Msa1002850 | -0.834598 | 2.731859e-56 | -8.615850e-47 |
| Msa0189930 | Msa1008750 | -0.810214 | 1.288529e-50 | -8.615850e-47 |
| Msa0189930 | Msa1014510 | -0.814447 | 1.533788e-51 | -8.615850e-47 |
| Msa0189930 | Msa1018990 | 0.814428 | 1.548614e-51 | -8.615850e-47 |
| Msa0189930 | Msa1028590 | -0.804207 | 2.413148e-49 | -8.615850e-47 |
| Msa0189930 | Msa1035480 | -0.820532 | 6.525187e-53 | -8.615850e-47 |
| Msa0189930 | Msa1036610 | -0.846617 | 1.940969e-59 | -8.615850e-47 |
| Msa0189930 | Msa1036710 | 0.830031 | 3.691443e-55 | -8.615850e-47 |
| Msa0189930 | Msa1039710 | 0.815311 | 9.867194e-52 | -8.615850e-47 |
| Msa0189930 | Msa1048070 | 0.812886 | 3.382542e-51 | -8.615850e-47 |
| Msa0189930 | Msa1063420 | -0.811190 | 7.924214e-51 | -8.615850e-47 |
| Msa0189930 | Msa1079430 | -0.803958 | 2.718973e-49 | -8.615850e-47 |
| Msa0189930 | Msa1080330 | 0.807618 | 4.629104e-50 | -8.615850e-47 |
| Msa0189930 | Msa1081790 | 0.803754 | 2.997716e-49 | -8.615850e-47 |
| Msa0189930 | Msa1093260 | -0.804390 | 2.210537e-49 | -8.615850e-47 |
| Msa0189930 | Msa1094190 | -0.801560 | 8.498468e-49 | -8.615850e-47 |
| Msa0189930 | Msa1100130 | 0.809024 | 2.321726e-50 | -8.615850e-47 |
| Msa0189930 | Msa1121490 | -0.801601 | 8.338090e-49 | -8.615850e-47 |
| Msa0189930 | Msa1144450 | -0.806013 | 1.010761e-49 | -8.615850e-47 |
| Msa0189930 | Msa1148980 | -0.835270 | 1.850043e-56 | -8.615850e-47 |
| Msa0189930 | Msa1156150 | 0.807348 | 5.280577e-50 | -8.615850e-47 |
| Msa0189930 | Msa1162780 | -0.803850 | 2.863599e-49 | -8.615850e-47 |
| Msa0189930 | Msa1163730 | -0.802664 | 5.039593e-49 | -8.615850e-47 |
| Msa0189930 | Msa1163900 | 0.805751 | 1.147281e-49 | -8.615850e-47 |
| Msa0189930 | Msa1168580 | -0.818439 | 1.959474e-52 | -8.615850e-47 |
| Msa0189930 | Msa1225860 | 0.802905 | 4.493672e-49 | -8.615850e-47 |
| Msa0189930 | Msa1242580 | 0.809764 | 1.610312e-50 | -8.615850e-47 |
| Msa0189930 | Msa1244720 | 0.808588 | 2.877330e-50 | -8.615850e-47 |
| Msa0189930 | Msa1264420 | -0.809492 | 1.842310e-50 | -8.615850e-47 |
| Msa0189930 | Msa1270660 | -0.811741 | 6.016187e-51 | -8.615850e-47 |
| Msa0189930 | Msa1271130 | -0.820462 | 6.772990e-53 | -8.615850e-47 |
| Msa0189930 | Msa1296460 | 0.801409 | 9.128703e-49 | -8.615850e-47 |
| Msa0189930 | Msa1305810 | -0.806370 | 8.502613e-50 | -8.615850e-47 |
| Msa0189930 | Msa1308870 | -0.814351 | 1.610377e-51 | -8.615850e-47 |
| Msa0189930 | Msa1313320 | -0.800480 | 1.413210e-48 | -8.615850e-47 |
| Msa0189930 | Msa1325410 | 0.814981 | 1.168094e-51 | -8.615850e-47 |
| Msa0189930 | Msa1325860 | 0.802821 | 4.677688e-49 | -8.615850e-47 |
| Msa0189930 | Msa1331000 | -0.809027 | 2.317405e-50 | -8.615850e-47 |
| Msa0189930 | Msa1346840 | -0.818230 | 2.184538e-52 | -8.615850e-47 |
| Msa0189930 | Msa1357890 | -0.801177 | 1.018279e-48 | -8.615850e-47 |
| Msa0189930 | Msa1359560 | -0.801855 | 7.395444e-49 | -8.615850e-47 |
| Msa0189930 | Msa1370070 | 0.802487 | 5.481351e-49 | -8.615850e-47 |
| Msa0189930 | Msa1371940 | -0.813605 | 2.351531e-51 | -8.615850e-47 |
| Msa0189930 | Msa1372150 | -0.803296 | 3.730788e-49 | -8.615850e-47 |
| Msa0189930 | Msa1376130 | -0.806454 | 8.161325e-50 | -8.615850e-47 |
| Msa0189930 | Msa1377570 | -0.819501 | 1.123646e-52 | -8.615850e-47 |
| Msa0189930 | Msa1385890 | -0.822357 | 2.473428e-53 | -8.615850e-47 |
| Msa0189930 | Msa1390690 | -0.802044 | 6.761373e-49 | -8.615850e-47 |
| Msa0189930 | Msa1390700 | -0.807380 | 5.198671e-50 | -8.615850e-47 |
| Msa0189930 | Msa1392900 | -0.800399 | 1.467810e-48 | -8.615850e-47 |
| Msa0189930 | Msa1392910 | -0.800095 | 1.692320e-48 | -8.615850e-47 |
| Msa0189930 | Msa1397120 | -0.809007 | 2.340286e-50 | -8.615850e-47 |
| Msa0189930 | Msa1404300 | -0.801308 | 9.572874e-49 | -8.615850e-47 |
| Msa0189930 | Msa1407190 | -0.818353 | 2.048801e-52 | -8.615850e-47 |
| Msa0189930 | Msa1412530 | -0.800862 | 1.180932e-48 | -8.615850e-47 |
| Msa0189930 | Msa1432130 | -0.807918 | 3.997542e-50 | -8.615850e-47 |
| Msa0189930 | Msa1444510 | -0.832799 | 7.692450e-56 | -8.615850e-47 |
| Msa0189930 | Msa1445390 | 0.849938 | 2.344281e-60 | -8.615850e-47 |
| Msa0189930 | Msa1448560 | -0.811556 | 6.598698e-51 | -8.615850e-47 |
| Msa0189930 | Msa1449340 | 0.858992 | 5.625947e-63 | -8.615850e-47 |
| Msa0189930 | Msa1458610 | -0.807591 | 4.689904e-50 | -8.615850e-47 |
| Msa0189930 | Msa1462290 | -0.816413 | 5.602452e-52 | -8.615850e-47 |
| Msa0189930 | Msa1463900 | -0.836733 | 7.871659e-57 | -8.615850e-47 |
| Msa0189930 | Msa1466540 | -0.806994 | 6.275903e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0189930 | MtrunA17_Chr2g0279451 | 96.296 | 243 | 6 | 1 | 1 | 240 | 1 | 243 | 6.11e-175 | 482 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0189930 | AT5G51220.1 | 68.240 | 233 | 71 | 2 | 23 | 252 | 35 | 267 | 5.26e-117 | 336 |
| Msa0189930 | AT5G51220.2 | 71.359 | 206 | 58 | 1 | 48 | 252 | 1 | 206 | 7.49e-112 | 321 |
| Msa0189930 | AT5G51220.3 | 71.728 | 191 | 52 | 1 | 23 | 211 | 35 | 225 | 2.35e-101 | 294 |
Find 79 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAATTATTGCTTCGTTAA+TGG | 0.128288 | 2_1:-5374893 | None:intergenic |
| GGAAATGATGGCGTTGAATT+TGG | 0.181254 | 2_1:+5377054 | Msa0189930:CDS |
| GTGCATTGGAGTACGAAATT+TGG | 0.242990 | 2_1:-5374964 | None:intergenic |
| GGTAAATGAGCCTGATTATC+AGG | 0.261509 | 2_1:+5375239 | Msa0189930:CDS |
| TTGGTCTAAACCCTGTTCTT+TGG | 0.271400 | 2_1:+5375191 | Msa0189930:CDS |
| CGCTTAAGCCCCTGATAATC+AGG | 0.308368 | 2_1:-5375249 | None:intergenic |
| TGCCCCTCGATTCGCCTCTT+CGG | 0.320984 | 2_1:+5375217 | Msa0189930:CDS |
| TGAGGCGGCGGCGGAGGAGG+AGG | 0.341997 | 2_1:-5374853 | None:intergenic |
| TGGCCTCAAAACCCTTGTTC+AGG | 0.350828 | 2_1:-5379660 | None:intergenic |
| GAAATGATGGCGTTGAATTT+GGG | 0.351199 | 2_1:+5377055 | Msa0189930:CDS |
| GCCCCTCGATTCGCCTCTTC+GGG | 0.360935 | 2_1:+5375218 | Msa0189930:CDS |
| AAATCACTAGGTTTAGCTTC+TGG | 0.361912 | 2_1:-5377357 | None:intergenic |
| TTAACCTAGACAAACTGTTT+TGG | 0.362402 | 2_1:+5375172 | Msa0189930:CDS |
| GAGGAATGAGGCGGCGGCGG+AGG | 0.373624 | 2_1:-5374859 | None:intergenic |
| GAATGAGGCGGCGGCGGAGG+AGG | 0.375482 | 2_1:-5374856 | None:intergenic |
| CTAGCATAGGTTTGGTGCAT+TGG | 0.411870 | 2_1:-5374978 | None:intergenic |
| GAGGGGCAGTGCCAAAGAAC+AGG | 0.416860 | 2_1:-5375202 | None:intergenic |
| AATAGAACTCACCCCAGCTT+TGG | 0.423024 | 2_1:-5377124 | None:intergenic |
| CATGATTGTAAATCTCATAA+AGG | 0.423400 | 2_1:-5377083 | None:intergenic |
| TTAACCTACTATTGATTAAG+TGG | 0.435138 | 2_1:+5377274 | Msa0189930:CDS |
| TCTGTCTGCAGTGTTTAACT+TGG | 0.440831 | 2_1:+5376957 | Msa0189930:intron |
| CTGCAACCCTAGCATAGGTT+TGG | 0.449314 | 2_1:-5374986 | None:intergenic |
| GATTGCCATGCAGCTTCGTC+TGG | 0.450235 | 2_1:-5378729 | None:intergenic |
| TCATCCACTTAATCAATAGT+AGG | 0.450487 | 2_1:-5377278 | None:intergenic |
| TGAGATGGGTGGCTGTCTGC+TGG | 0.452275 | 2_1:-5374785 | None:intergenic |
| AGCTTAGAGTCTCCAAAGCT+GGG | 0.460157 | 2_1:+5377112 | Msa0189930:CDS |
| TACTTCCCGTCGAGCATACC+TGG | 0.460615 | 2_1:-5379475 | None:intergenic |
| TCTCACTACAGGGCTCTCAT+TGG | 0.462058 | 2_1:+5379628 | Msa0189930:intron |
| CGGCGGCGGAGGAGGAGGAG+AGG | 0.462754 | 2_1:-5374848 | None:intergenic |
| GAGCTTAGAGTCTCCAAAGC+TGG | 0.463793 | 2_1:+5377111 | Msa0189930:CDS |
| GATAAACCGCTTATTTATGA+AGG | 0.469297 | 2_1:+5375363 | Msa0189930:CDS |
| GGCCTCAAAACCCTTGTTCA+GGG | 0.483596 | 2_1:-5379659 | None:intergenic |
| GATGAGGAATGAGGCGGCGG+CGG | 0.486094 | 2_1:-5374862 | None:intergenic |
| CGACTGACTCTGAGATGAGA+TGG | 0.489764 | 2_1:-5374800 | None:intergenic |
| GTTGGCCAGGTATGCTCGAC+GGG | 0.491897 | 2_1:+5379470 | Msa0189930:CDS |
| TGGAAAACCTTCCCTGAACA+AGG | 0.495921 | 2_1:+5379648 | Msa0189930:CDS |
| AGCTGCATGGCAATCAGTGC+AGG | 0.502639 | 2_1:+5378737 | Msa0189930:CDS |
| CAATGCACCAAACCTATGCT+AGG | 0.512041 | 2_1:+5374979 | Msa0189930:CDS |
| TAGACCAAAACAGTTTGTCT+AGG | 0.521027 | 2_1:-5375176 | None:intergenic |
| CTTTGCTTGTACTTCACATG+TGG | 0.521799 | 2_1:+5377004 | Msa0189930:CDS |
| GAATCAGAATGTTTCGAACA+TGG | 0.526755 | 2_1:+5374919 | Msa0189930:exon |
| TCTTCTACGATTGGTGGTGG+TGG | 0.527780 | 2_1:-5375014 | None:intergenic |
| TCAAAACCCTTGTTCAGGGA+AGG | 0.543722 | 2_1:-5379655 | None:intergenic |
| TACCCGAAGAGGCGAATCGA+GGG | 0.544907 | 2_1:-5375220 | None:intergenic |
| GTTAAGCAAGAGGGAAATGA+TGG | 0.552109 | 2_1:+5377042 | Msa0189930:CDS |
| ACTATTGATTAAGTGGATGA+AGG | 0.554316 | 2_1:+5377281 | Msa0189930:CDS |
| GGGTGGCTGTCTGCTGGACA+CGG | 0.554909 | 2_1:-5374779 | None:intergenic |
| GTAAATGAGCCTGATTATCA+GGG | 0.561045 | 2_1:+5375240 | Msa0189930:CDS |
| CGAGATGAGGAATGAGGCGG+CGG | 0.563969 | 2_1:-5374865 | None:intergenic |
| GGAGGAGGAGGAGAGGAGAG+TGG | 0.567403 | 2_1:-5374841 | None:intergenic |
| CTTGCGCCGCGTTAAGCAAG+AGG | 0.569416 | 2_1:+5377032 | Msa0189930:CDS |
| GACTGACTCTGAGATGAGAT+GGG | 0.570404 | 2_1:-5374799 | None:intergenic |
| AAGCAGAGTAAATCAATTCG+AGG | 0.571815 | 2_1:+5375303 | Msa0189930:CDS |
| AGCAGAGTAAATCAATTCGA+GGG | 0.572549 | 2_1:+5375304 | Msa0189930:CDS |
| AGGAATATATTCTCCGACGA+TGG | 0.578492 | 2_1:+5378696 | Msa0189930:intron |
| TGAGATTTACAATCATGATG+TGG | 0.579398 | 2_1:+5377089 | Msa0189930:CDS |
| GAGAGACGAGATGAGGAATG+AGG | 0.593856 | 2_1:-5374871 | None:intergenic |
| GGAGTACGAAATTTGGAGAG+TGG | 0.594807 | 2_1:-5374957 | None:intergenic |
| AACTAACCTTCATAAATAAG+CGG | 0.600276 | 2_1:-5375369 | None:intergenic |
| TCAGGCTCATTTACCCGAAG+AGG | 0.601807 | 2_1:-5375231 | None:intergenic |
| CGTTGGCCAGGTATGCTCGA+CGG | 0.610581 | 2_1:+5379469 | Msa0189930:CDS |
| AGAAGAAAAGATCGAACCTA+CGG | 0.617726 | 2_1:+5375031 | Msa0189930:CDS |
| GGAAAACCTTCCCTGAACAA+GGG | 0.618295 | 2_1:+5379649 | Msa0189930:CDS |
| AATGCACCAAACCTATGCTA+GGG | 0.618833 | 2_1:+5374980 | Msa0189930:CDS |
| TTGCGCCGCGTTAAGCAAGA+GGG | 0.620283 | 2_1:+5377033 | Msa0189930:CDS |
| CAACACCAGACGAAGCTGCA+TGG | 0.633893 | 2_1:+5378724 | Msa0189930:CDS |
| AGGGGCAGTGCCAAAGAACA+GGG | 0.641647 | 2_1:-5375201 | None:intergenic |
| TGCAGCTGCAACCCTAGCAT+AGG | 0.644632 | 2_1:-5374991 | None:intergenic |
| TTACCCGAAGAGGCGAATCG+AGG | 0.644838 | 2_1:-5375221 | None:intergenic |
| CATTTCCCTCTTGCTTAACG+CGG | 0.646301 | 2_1:-5377038 | None:intergenic |
| TGGTGTTGAAGAACCATCGT+CGG | 0.659864 | 2_1:-5378709 | None:intergenic |
| ACCCGAAGAGGCGAATCGAG+GGG | 0.659968 | 2_1:-5375219 | None:intergenic |
| GCAGAGTAAATCAATTCGAG+GGG | 0.660889 | 2_1:+5375305 | Msa0189930:CDS |
| ATAACAGTAGCAAAATCACT+AGG | 0.678657 | 2_1:-5377369 | None:intergenic |
| GCTTAGAGTCTCCAAAGCTG+GGG | 0.680406 | 2_1:+5377113 | Msa0189930:CDS |
| AGACGAGATGAGGAATGAGG+CGG | 0.682124 | 2_1:-5374868 | None:intergenic |
| TGACTCTGAGATGAGATGGG+TGG | 0.698294 | 2_1:-5374796 | None:intergenic |
| GTTAATGGAGAGACGAGATG+AGG | 0.698896 | 2_1:-5374878 | None:intergenic |
| TAAATGAGCCTGATTATCAG+GGG | 0.701090 | 2_1:+5375241 | Msa0189930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAACTAAAAACTTTATTTTA+TGG | + | chr2_1:5376678-5376697 | Msa0189930:intron | 10.0% |
| !!! | AAACATATAATTTTAGAAAA+TGG | - | chr2_1:5376830-5376849 | None:intergenic | 10.0% |
| !! | ATTGTAAGAAAATTAATTTA+TGG | - | chr2_1:5377174-5377193 | None:intergenic | 10.0% |
| !! | TTTATATATTCTTATCATAT+TGG | + | chr2_1:5379106-5379125 | Msa0189930:intron | 10.0% |
| !!! | TTTTAGTTTTTGTTAAAAAC+AGG | + | chr2_1:5374755-5374774 | Msa0189930:five_prime_UTR | 15.0% |
| !! | AACTTATAACTATATGAAAA+CGG | - | chr2_1:5375527-5375546 | None:intergenic | 15.0% |
| !! | AAGATATATTTGGATTTAAA+TGG | - | chr2_1:5376509-5376528 | None:intergenic | 15.0% |
| !! | TAAATCCAAATATATCTTAA+TGG | + | chr2_1:5376511-5376530 | Msa0189930:intron | 15.0% |
| !! | AAATTATATGTTTAGAAATC+AGG | + | chr2_1:5376837-5376856 | Msa0189930:intron | 15.0% |
| !! | TCAATCATTAAAAATCAATT+TGG | - | chr2_1:5378314-5378333 | None:intergenic | 15.0% |
| !!! | TATACTTTTTCTTAAAACTT+GGG | - | chr2_1:5378655-5378674 | None:intergenic | 15.0% |
| !!! | TTATACTTTTTCTTAAAACT+TGG | - | chr2_1:5378656-5378675 | None:intergenic | 15.0% |
| !!! | TAAATTGTATTAACTTGAAT+TGG | - | chr2_1:5378872-5378891 | None:intergenic | 15.0% |
| !!! | TAAATTGTATTAACTTGAAT+TGG | - | chr2_1:5378872-5378891 | None:intergenic | 15.0% |
| !! | AAAAAATATTAACTGAGAAA+TGG | - | chr2_1:5379088-5379107 | None:intergenic | 15.0% |
| !!! | AATTGTCAATATTGTTATTT+TGG | - | chr2_1:5379276-5379295 | None:intergenic | 15.0% |
| !! | AAACAAAACAATAAAAAAGA+TGG | - | chr2_1:5379318-5379337 | None:intergenic | 15.0% |
| !!! | TTTCTTTCTCTGTTTTTATT+GGG | + | chr2_1:5376177-5376196 | Msa0189930:intron | 20.0% |
| !! | AAATATTTGTCAAACCATTA+AGG | - | chr2_1:5376345-5376364 | None:intergenic | 20.0% |
| !! | TCAAACCATTAAGATATATT+TGG | - | chr2_1:5376519-5376538 | None:intergenic | 20.0% |
| !!! | GTTTGACAAATTATTTTCTT+TGG | + | chr2_1:5376533-5376552 | Msa0189930:intron | 20.0% |
| !! | TGAAGATTTCATTTATCTTT+AGG | - | chr2_1:5376656-5376675 | None:intergenic | 20.0% |
| !! | GAGAAAAATATATCAAAAAG+AGG | - | chr2_1:5376737-5376756 | None:intergenic | 20.0% |
| !! | AGATAAATGATTAATTGACA+GGG | - | chr2_1:5377461-5377480 | None:intergenic | 20.0% |
| !! | AAGATAAATGATTAATTGAC+AGG | - | chr2_1:5377462-5377481 | None:intergenic | 20.0% |
| !!! | GTAATTGGTTTTAGTAAAAA+AGG | + | chr2_1:5377564-5377583 | Msa0189930:intron | 20.0% |
| !! | TATATTACTGAGATATTATC+AGG | - | chr2_1:5377667-5377686 | None:intergenic | 20.0% |
| !! | TTAATACCATCTTAGAATTT+GGG | - | chr2_1:5377916-5377935 | None:intergenic | 20.0% |
| !! | TTTAATACCATCTTAGAATT+TGG | - | chr2_1:5377917-5377936 | None:intergenic | 20.0% |
| !!! | AAATTCTAAGATGGTATTAA+AGG | + | chr2_1:5377916-5377935 | Msa0189930:intron | 20.0% |
| !! | TTAATGATTGAGAAGAAATT+TGG | - | chr2_1:5378323-5378342 | None:intergenic | 20.0% |
| !! | TTAATGATTGAGAAGAAATT+TGG | + | chr2_1:5378323-5378342 | Msa0189930:intron | 20.0% |
| !!! | AAAAAGGTTTGAAATGATAT+TGG | + | chr2_1:5378346-5378365 | Msa0189930:intron | 20.0% |
| !!! | AAAAGGTTTGAAATGATATT+GGG | + | chr2_1:5378347-5378366 | Msa0189930:intron | 20.0% |
| !!! | CAACTTATGAACATATTTTT+GGG | - | chr2_1:5378620-5378639 | None:intergenic | 20.0% |
| !!! | TCAACTTATGAACATATTTT+TGG | - | chr2_1:5378621-5378640 | None:intergenic | 20.0% |
| !! | AGGTATTTGAAAAAAATGAA+AGG | - | chr2_1:5379357-5379376 | None:intergenic | 20.0% |
| !!! | CTGAAATCATATTCTTTTAT+AGG | + | chr2_1:5379446-5379465 | Msa0189930:intron | 20.0% |
| !!! | TATATACTGGTTGTTAAAAT+GGG | + | chr2_1:5379590-5379609 | Msa0189930:intron | 20.0% |
| ! | ATCAATTATTGCTTCGTTAA+TGG | - | chr2_1:5374896-5374915 | None:intergenic | 25.0% |
| ! | TTAATTTAATTGCATACCGT+AGG | - | chr2_1:5375050-5375069 | None:intergenic | 25.0% |
| ! | TAAATATAATCACATGTGTC+AGG | + | chr2_1:5375082-5375101 | Msa0189930:intron | 25.0% |
| ! | AACTAACCTTCATAAATAAG+CGG | - | chr2_1:5375372-5375391 | None:intergenic | 25.0% |
| !! | TACACACATGTATTTTCTAA+TGG | - | chr2_1:5375408-5375427 | None:intergenic | 25.0% |
| ! | GTTTATTTGAGCTTATCTAT+TGG | - | chr2_1:5375661-5375680 | None:intergenic | 25.0% |
| !!! | ATTATGGAGCATATTTTGAT+CGG | - | chr2_1:5375683-5375702 | None:intergenic | 25.0% |
| ! | GGGAATAATGACATATATTA+TGG | - | chr2_1:5375699-5375718 | None:intergenic | 25.0% |
| !! | TTTTGTAATTTCACAACTAG+TGG | + | chr2_1:5375792-5375811 | Msa0189930:intron | 25.0% |
| ! | TACCAAATAAAATTCAGTTG+GGG | - | chr2_1:5375948-5375967 | None:intergenic | 25.0% |
| ! | CTACCAAATAAAATTCAGTT+GGG | - | chr2_1:5375949-5375968 | None:intergenic | 25.0% |
| ! | TCTACCAAATAAAATTCAGT+TGG | - | chr2_1:5375950-5375969 | None:intergenic | 25.0% |
| !!! | CTTTCTTTCTCTGTTTTTAT+TGG | + | chr2_1:5376176-5376195 | Msa0189930:intron | 25.0% |
| !!! | TTCTTTCTCTGTTTTTATTG+GGG | + | chr2_1:5376178-5376197 | Msa0189930:intron | 25.0% |
| ! | AATAAAAACAACTAAGCCTT+AGG | + | chr2_1:5376240-5376259 | Msa0189930:intron | 25.0% |
| ! | AAGGTAGATTTGGATATAAA+TGG | - | chr2_1:5376326-5376345 | None:intergenic | 25.0% |
| ! | TATATCCAAATCTACCTTAA+TGG | + | chr2_1:5376328-5376347 | Msa0189930:intron | 25.0% |
| !! | GTTTGACAAATATTTTTCCT+TGG | + | chr2_1:5376350-5376369 | Msa0189930:intron | 25.0% |
| !! | ATACTACATTGTTAGCTTAT+AGG | - | chr2_1:5376585-5376604 | None:intergenic | 25.0% |
| ! | AATCATTAGAGAAAAAGTCA+AGG | - | chr2_1:5376628-5376647 | None:intergenic | 25.0% |
| ! | AAAAGTTGTCTTTACTTAAG+TGG | - | chr2_1:5376776-5376795 | None:intergenic | 25.0% |
| ! | CATGATTGTAAATCTCATAA+AGG | - | chr2_1:5377086-5377105 | None:intergenic | 25.0% |
| !! | ATGTACTCACAAACTATTTT+GGG | - | chr2_1:5377201-5377220 | None:intergenic | 25.0% |
| !!! | GTCATTTAATTTGAAATGAC+AGG | + | chr2_1:5377251-5377270 | Msa0189930:intron | 25.0% |
| !! | TTAACCTACTATTGATTAAG+TGG | + | chr2_1:5377274-5377293 | Msa0189930:CDS | 25.0% |
| ! | TCTTTCAATATTCAAAACAG+TGG | - | chr2_1:5377489-5377508 | None:intergenic | 25.0% |
| ! | TTCAAAGTTGTTGAAGTAAT+TGG | + | chr2_1:5377549-5377568 | Msa0189930:intron | 25.0% |
| !! | AATCCTAAGAGATATTCTTT+TGG | + | chr2_1:5377693-5377712 | Msa0189930:intron | 25.0% |
| ! | AGTATCTAAGAATATCTCTT+AGG | - | chr2_1:5377737-5377756 | None:intergenic | 25.0% |
| !! | ATTGATGACTCTTAGAATTT+GGG | - | chr2_1:5378128-5378147 | None:intergenic | 25.0% |
| ! | AAATTTGGAAAGACATTGTT+GGG | - | chr2_1:5378157-5378176 | None:intergenic | 25.0% |
| ! | TTGAGAAGAAATTTGGAAAA+AGG | + | chr2_1:5378330-5378349 | Msa0189930:intron | 25.0% |
| ! | TAAATCAATCCTTACAAAAC+CGG | - | chr2_1:5378450-5378469 | None:intergenic | 25.0% |
| !! | TTTGAGACCATCTTATAATT+GGG | - | chr2_1:5378481-5378500 | None:intergenic | 25.0% |
| !! | ATATGTTCATAAGTTGAGTT+AGG | + | chr2_1:5378624-5378643 | Msa0189930:intron | 25.0% |
| !! | TTTTTCTTAAAACTTGGGTT+GGG | - | chr2_1:5378650-5378669 | None:intergenic | 25.0% |
| !! | ATGGCTTAAATATACTTTTC+AGG | - | chr2_1:5378832-5378851 | None:intergenic | 25.0% |
| ! | TTGAAAAAAATGAAAGGCAA+AGG | - | chr2_1:5379351-5379370 | None:intergenic | 25.0% |
| !! | CTATATACTGGTTGTTAAAA+TGG | + | chr2_1:5379589-5379608 | Msa0189930:intron | 25.0% |
| ! | CTTTATTGTTATTCTGTGTC+CGG | - | chr2_1:5375117-5375136 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTGTGTGCTTTGC+AGG | + | chr2_1:5375149-5375168 | Msa0189930:intron | 30.0% |
| ! | TTAACCTAGACAAACTGTTT+TGG | + | chr2_1:5375172-5375191 | Msa0189930:CDS | 30.0% |
| GATAAACCGCTTATTTATGA+AGG | + | chr2_1:5375363-5375382 | Msa0189930:CDS | 30.0% | |
| TAAATGAGCCAAAGAATAGA+GGG | - | chr2_1:5376075-5376094 | None:intergenic | 30.0% | |
| ATAAATGAGCCAAAGAATAG+AGG | - | chr2_1:5376076-5376095 | None:intergenic | 30.0% | |
| !!! | TCTTTCTCTGTTTTTATTGG+GGG | + | chr2_1:5376179-5376198 | Msa0189930:intron | 30.0% |
| CATGAATCATGTTCAATGAT+AGG | + | chr2_1:5376300-5376319 | Msa0189930:intron | 30.0% | |
| TCAAACCATTAAGGTAGATT+TGG | - | chr2_1:5376336-5376355 | None:intergenic | 30.0% | |
| ! | AACTAAAGCCTTTTCCTATT+AGG | + | chr2_1:5376423-5376442 | Msa0189930:intron | 30.0% |
| CATGAATCATGTTCAATGAT+AGG | + | chr2_1:5376300-5376319 | Msa0189930:intron | 30.0% | |
| ! | CATTGTTAGCTTATAGGAAA+AGG | - | chr2_1:5376579-5376598 | None:intergenic | 30.0% |
| ! | TGTAGTATCTTTTCTACAAC+AGG | + | chr2_1:5376597-5376616 | Msa0189930:intron | 30.0% |
| GACAGAAGAAAGAAGTTTAT+AGG | - | chr2_1:5376943-5376962 | None:intergenic | 30.0% | |
| TGAGATTTACAATCATGATG+TGG | + | chr2_1:5377089-5377108 | Msa0189930:CDS | 30.0% | |
| ! | CATGTACTCACAAACTATTT+TGG | - | chr2_1:5377202-5377221 | None:intergenic | 30.0% |
| ! | AATAGTTTGTGAGTACATGT+AGG | + | chr2_1:5377203-5377222 | Msa0189930:intron | 30.0% |
| TCATCCACTTAATCAATAGT+AGG | - | chr2_1:5377281-5377300 | None:intergenic | 30.0% | |
| ! | ACTATTGATTAAGTGGATGA+AGG | + | chr2_1:5377281-5377300 | Msa0189930:CDS | 30.0% |
| ATAACAGTAGCAAAATCACT+AGG | - | chr2_1:5377372-5377391 | None:intergenic | 30.0% | |
| ! | GTGATTTTGCTACTGTTATA+TGG | + | chr2_1:5377373-5377392 | Msa0189930:CDS | 30.0% |
| ! | ATTTTGCTACTGTTATATGG+AGG | + | chr2_1:5377376-5377395 | Msa0189930:CDS | 30.0% |
| TCAACAACTTTGAATAAAGC+AGG | - | chr2_1:5377543-5377562 | None:intergenic | 30.0% | |
| ATAGTAGCTTATACGAAAGA+CGG | + | chr2_1:5377631-5377650 | Msa0189930:intron | 30.0% | |
| TGACCAAAAGAATATCTCTT+AGG | - | chr2_1:5377699-5377718 | None:intergenic | 30.0% | |
| ! | CATTGATGACTCTTAGAATT+TGG | - | chr2_1:5378129-5378148 | None:intergenic | 30.0% |
| GAAATTTGGAAAGACATTGT+TGG | - | chr2_1:5378158-5378177 | None:intergenic | 30.0% | |
| ! | ACCTCATTTTGTCATAAAGA+GGG | - | chr2_1:5378237-5378256 | None:intergenic | 30.0% |
| ! | TACCTCATTTTGTCATAAAG+AGG | - | chr2_1:5378238-5378257 | None:intergenic | 30.0% |
| AAAAGGATGAGATCAGATAA+TGG | - | chr2_1:5378283-5378302 | None:intergenic | 30.0% | |
| ! | ATTATCTGATCTCATCCTTT+TGG | + | chr2_1:5378282-5378301 | Msa0189930:intron | 30.0% |
| TGCTTTATCTCTATTCTATG+TGG | - | chr2_1:5378386-5378405 | None:intergenic | 30.0% | |
| TTGAGACCATCTTATAATTG+GGG | - | chr2_1:5378480-5378499 | None:intergenic | 30.0% | |
| !! | CTTTGAGACCATCTTATAAT+TGG | - | chr2_1:5378482-5378501 | None:intergenic | 30.0% |
| ! | CTTTTTCTTAAAACTTGGGT+TGG | - | chr2_1:5378651-5378670 | None:intergenic | 30.0% |
| TATATTCCTGGAGAAAAACA+TGG | - | chr2_1:5378685-5378704 | None:intergenic | 30.0% | |
| ! | ATTAACTTGAATTGGTCTCT+AGG | - | chr2_1:5378864-5378883 | None:intergenic | 30.0% |
| ! | ATTAACTTGAATTGGTCTCT+AGG | - | chr2_1:5378864-5378883 | None:intergenic | 30.0% |
| ! | TAAAAAAGATGGTGATGACA+TGG | - | chr2_1:5379307-5379326 | None:intergenic | 30.0% |
| TGAAAGCAAATATAAGCATC+AGG | - | chr2_1:5379377-5379396 | None:intergenic | 30.0% | |
| TGTTGTACTCAATGTAACTA+AGG | - | chr2_1:5379417-5379436 | None:intergenic | 30.0% | |
| ! | TCATATTCTTTTATAGGCGT+TGG | + | chr2_1:5379452-5379471 | Msa0189930:intron | 30.0% |
| ATTGTGAAGTGAACGAAAAT+TGG | + | chr2_1:5379553-5379572 | Msa0189930:intron | 30.0% | |
| GAATCAGAATGTTTCGAACA+TGG | + | chr2_1:5374919-5374938 | Msa0189930:exon | 35.0% | |
| ! | ATCTTTTCTTCTACGATTGG+TGG | - | chr2_1:5375023-5375042 | None:intergenic | 35.0% |
| ! | TCGATCTTTTCTTCTACGAT+TGG | - | chr2_1:5375026-5375045 | None:intergenic | 35.0% |
| AGAAGAAAAGATCGAACCTA+CGG | + | chr2_1:5375031-5375050 | Msa0189930:CDS | 35.0% | |
| ATATAATCACATGTGTCAGG+TGG | + | chr2_1:5375085-5375104 | Msa0189930:intron | 35.0% | |
| TAGACCAAAACAGTTTGTCT+AGG | - | chr2_1:5375179-5375198 | None:intergenic | 35.0% | |
| GTAAATGAGCCTGATTATCA+GGG | + | chr2_1:5375240-5375259 | Msa0189930:CDS | 35.0% | |
| TAAATGAGCCTGATTATCAG+GGG | + | chr2_1:5375241-5375260 | Msa0189930:CDS | 35.0% | |
| AAGCAGAGTAAATCAATTCG+AGG | + | chr2_1:5375303-5375322 | Msa0189930:CDS | 35.0% | |
| AGCAGAGTAAATCAATTCGA+GGG | + | chr2_1:5375304-5375323 | Msa0189930:CDS | 35.0% | |
| TTTCTAATGGCATGAAGAGA+AGG | - | chr2_1:5375395-5375414 | None:intergenic | 35.0% | |
| ACATGTGTGTAGACTTTGTT+TGG | + | chr2_1:5375417-5375436 | Msa0189930:intron | 35.0% | |
| ! | GTAGACTTTGTTTGGATACA+CGG | + | chr2_1:5375425-5375444 | Msa0189930:intron | 35.0% |
| !! | GTTGTTTTCATAAGCTATCC+TGG | + | chr2_1:5375544-5375563 | Msa0189930:intron | 35.0% |
| CTTATTCTTGTAAACTCTCC+AGG | - | chr2_1:5375565-5375584 | None:intergenic | 35.0% | |
| ATGTCATTATTCCCACACAA+AGG | + | chr2_1:5375705-5375724 | Msa0189930:intron | 35.0% | |
| ATCAATTCACTCATCTAGGT+CGG | + | chr2_1:5375762-5375781 | Msa0189930:intron | 35.0% | |
| AACTCTCAAACTAAACTACC+GGG | - | chr2_1:5375867-5375886 | None:intergenic | 35.0% | |
| CAACTCTCAAACTAAACTAC+CGG | - | chr2_1:5375868-5375887 | None:intergenic | 35.0% | |
| !! | GTAGTTTAGTTTGAGAGTTG+AGG | + | chr2_1:5375868-5375887 | Msa0189930:intron | 35.0% |
| ! | TCTTGCTTGTTTCTCATTAG+TGG | + | chr2_1:5375907-5375926 | Msa0189930:intron | 35.0% |
| ! | CTTGCTTGTTTCTCATTAGT+GGG | + | chr2_1:5375908-5375927 | Msa0189930:intron | 35.0% |
| TCTCATTAGTGGGATGATTT+AGG | + | chr2_1:5375918-5375937 | Msa0189930:intron | 35.0% | |
| CAAATAAAATTCAGTTGGGG+TGG | - | chr2_1:5375945-5375964 | None:intergenic | 35.0% | |
| ! | CACCCCAACTGAATTTTATT+TGG | + | chr2_1:5375943-5375962 | Msa0189930:intron | 35.0% |
| GTAATACACACATGAACACT+TGG | - | chr2_1:5376147-5376166 | None:intergenic | 35.0% | |
| !!! | CTTTCTCTGTTTTTATTGGG+GGG | + | chr2_1:5376180-5376199 | Msa0189930:intron | 35.0% |
| ! | AAAGCCTTTTCCTATTAGGT+AGG | + | chr2_1:5376427-5376446 | Msa0189930:intron | 35.0% |
| TGGTCTCTCTAATCAACAAT+TGG | + | chr2_1:5376553-5376572 | Msa0189930:intron | 35.0% | |
| GTTGTCTTTACTTAAGTGGT+TGG | - | chr2_1:5376772-5376791 | None:intergenic | 35.0% | |
| ! | TTTTAAACTCCAGCATGTTC+TGG | + | chr2_1:5376792-5376811 | Msa0189930:intron | 35.0% |
| TGTAGAAGGAGTTTGATGTA+TGG | + | chr2_1:5376879-5376898 | Msa0189930:intron | 35.0% | |
| ! | GAAATGATGGCGTTGAATTT+GGG | + | chr2_1:5377055-5377074 | Msa0189930:CDS | 35.0% |
| ! | AGCTCGAGAAGATCTTTTAT+GGG | + | chr2_1:5377304-5377323 | Msa0189930:CDS | 35.0% |
| ! | AAATCACTAGGTTTAGCTTC+TGG | - | chr2_1:5377360-5377379 | None:intergenic | 35.0% |
| CTACTTTCAATAGGTGCAAA+AGG | - | chr2_1:5377436-5377455 | None:intergenic | 35.0% | |
| ! | CTTTTGCACCTATTGAAAGT+AGG | + | chr2_1:5377434-5377453 | Msa0189930:intron | 35.0% |
| ! | ACCATCTTAGAATTTGGGTT+GGG | - | chr2_1:5377911-5377930 | None:intergenic | 35.0% |
| TACCATCTTAGAATTTGGGT+TGG | - | chr2_1:5377912-5377931 | None:intergenic | 35.0% | |
| AAAGGATATCCAAGATCCAT+TGG | + | chr2_1:5377934-5377953 | Msa0189930:intron | 35.0% | |
| AAGGATATCCAAGATCCATT+GGG | + | chr2_1:5377935-5377954 | Msa0189930:intron | 35.0% | |
| ACCTTAGAAGCTCATTTGTA+GGG | + | chr2_1:5378086-5378105 | Msa0189930:intron | 35.0% | |
| ! | ATTCTAAGAGTCATCAATGC+CGG | + | chr2_1:5378130-5378149 | Msa0189930:intron | 35.0% |
| TCCCTCTTTATGACAAAATG+AGG | + | chr2_1:5378233-5378252 | Msa0189930:intron | 35.0% | |
| ! | TCAATTTGGTGAGTACCAAA+AGG | - | chr2_1:5378300-5378319 | None:intergenic | 35.0% |
| AAAGCTTATCCATGATCCAT+TGG | + | chr2_1:5378498-5378517 | Msa0189930:intron | 35.0% | |
| AAGCTTATCCATGATCCATT+GGG | + | chr2_1:5378499-5378518 | Msa0189930:intron | 35.0% | |
| CAGGTATGTCTTCTAAATGA+TGG | + | chr2_1:5378756-5378775 | Msa0189930:intron | 35.0% | |
| CTTGACTGATGAATGCTTAA+TGG | - | chr2_1:5378899-5378918 | None:intergenic | 35.0% | |
| CTTGACTGATGAATGCTTAA+TGG | - | chr2_1:5378899-5378918 | None:intergenic | 35.0% | |
| ! | AGGTTCTCGGTTTAACATTT+TGG | + | chr2_1:5379044-5379063 | Msa0189930:intron | 35.0% |
| !!! | AACATTTTGGCTTCTCTTGA+AGG | + | chr2_1:5379057-5379076 | Msa0189930:intron | 35.0% |
| ! | AGTCTCTTTGCTGTAAAATC+AGG | + | chr2_1:5379129-5379148 | Msa0189930:intron | 35.0% |
| ! | GTCTCTTTGCTGTAAAATCA+GGG | + | chr2_1:5379130-5379149 | Msa0189930:intron | 35.0% |
| CAGCAGTCAATACAATAAAC+AGG | - | chr2_1:5379227-5379246 | None:intergenic | 35.0% | |
| !! | GGAAAGAGTTCTAGACAAAA+AGG | - | chr2_1:5379255-5379274 | None:intergenic | 35.0% |
| GTAAGTTGCATGACTTTAAC+AGG | + | chr2_1:5379495-5379514 | Msa0189930:intron | 35.0% | |
| TAATGCCTGCTTCTATATAC+TGG | + | chr2_1:5379577-5379596 | Msa0189930:intron | 35.0% | |
| AACAACCAGTATATAGAAGC+AGG | - | chr2_1:5379585-5379604 | None:intergenic | 35.0% | |
| GTGCATTGGAGTACGAAATT+TGG | - | chr2_1:5374967-5374986 | None:intergenic | 40.0% | |
| AATGCACCAAACCTATGCTA+GGG | + | chr2_1:5374980-5374999 | Msa0189930:CDS | 40.0% | |
| ! | TTTTCTTCTACGATTGGTGG+TGG | - | chr2_1:5375020-5375039 | None:intergenic | 40.0% |
| TTGGTCTAAACCCTGTTCTT+TGG | + | chr2_1:5375191-5375210 | Msa0189930:CDS | 40.0% | |
| GGTAAATGAGCCTGATTATC+AGG | + | chr2_1:5375239-5375258 | Msa0189930:CDS | 40.0% | |
| GCAGAGTAAATCAATTCGAG+GGG | + | chr2_1:5375305-5375324 | Msa0189930:CDS | 40.0% | |
| CCATATGCAAACCTTTGTGT+GGG | - | chr2_1:5375719-5375738 | None:intergenic | 40.0% | |
| TCCATATGCAAACCTTTGTG+TGG | - | chr2_1:5375720-5375739 | None:intergenic | 40.0% | |
| ! | TGAGTGAATTGATGGACCAT+AGG | - | chr2_1:5375755-5375774 | None:intergenic | 40.0% |
| GTCCATCAATTCACTCATCT+AGG | + | chr2_1:5375758-5375777 | Msa0189930:intron | 40.0% | |
| GACCTAGATGAGTGAATTGA+TGG | - | chr2_1:5375763-5375782 | None:intergenic | 40.0% | |
| AAACTCCTCCACATGTACTA+TGG | + | chr2_1:5376025-5376044 | Msa0189930:intron | 40.0% | |
| AACTCCTCCACATGTACTAT+GGG | + | chr2_1:5376026-5376045 | Msa0189930:intron | 40.0% | |
| TCGTTTCTCTCGCGAATATT+TGG | + | chr2_1:5376102-5376121 | Msa0189930:intron | 40.0% | |
| !! | TGTTTTTATTGGGGGGCTTT+TGG | + | chr2_1:5376187-5376206 | Msa0189930:intron | 40.0% |
| ! | ATTGTTGATGAGAGAGACCA+AGG | - | chr2_1:5376370-5376389 | None:intergenic | 40.0% |
| CGATCCTACCTAATAGGAAA+AGG | - | chr2_1:5376434-5376453 | None:intergenic | 40.0% | |
| CAAAGTCGATCCTACCTAAT+AGG | - | chr2_1:5376440-5376459 | None:intergenic | 40.0% | |
| TCAAGCACATTCAGTGTAGA+AGG | + | chr2_1:5376865-5376884 | Msa0189930:intron | 40.0% | |
| TCTGTCTGCAGTGTTTAACT+TGG | + | chr2_1:5376957-5376976 | Msa0189930:intron | 40.0% | |
| CTTTGCTTGTACTTCACATG+TGG | + | chr2_1:5377004-5377023 | Msa0189930:CDS | 40.0% | |
| GTTAAGCAAGAGGGAAATGA+TGG | + | chr2_1:5377042-5377061 | Msa0189930:CDS | 40.0% | |
| ! | GGAAATGATGGCGTTGAATT+TGG | + | chr2_1:5377054-5377073 | Msa0189930:CDS | 40.0% |
| TGACCTCTCTTGATGAATTG+TGG | + | chr2_1:5377229-5377248 | Msa0189930:intron | 40.0% | |
| TGACCACAATTCATCAAGAG+AGG | - | chr2_1:5377235-5377254 | None:intergenic | 40.0% | |
| ! | GAGCTCGAGAAGATCTTTTA+TGG | + | chr2_1:5377303-5377322 | Msa0189930:CDS | 40.0% |
| TGCTACTGTTATATGGAGGT+TGG | + | chr2_1:5377380-5377399 | Msa0189930:intron | 40.0% | |
| GTGCAAAAGGAGAATTGAAG+AGG | - | chr2_1:5377423-5377442 | None:intergenic | 40.0% | |
| AGACCATATCTATTCTGACG+TGG | - | chr2_1:5378034-5378053 | None:intergenic | 40.0% | |
| !! | CAAATGAGCTTCTAAGGTGA+GGG | - | chr2_1:5378084-5378103 | None:intergenic | 40.0% |
| !! | ACAAATGAGCTTCTAAGGTG+AGG | - | chr2_1:5378085-5378104 | None:intergenic | 40.0% |
| CACCTTAGAAGCTCATTTGT+AGG | + | chr2_1:5378085-5378104 | Msa0189930:intron | 40.0% | |
| CCTTAGAAGCTCATTTGTAG+GGG | + | chr2_1:5378087-5378106 | Msa0189930:intron | 40.0% | |
| TCATTTGTAGGGGTTGAGTT+AGG | + | chr2_1:5378097-5378116 | Msa0189930:intron | 40.0% | |
| !!! | GTGTTTTGACACAAGACTCA+TGG | + | chr2_1:5378205-5378224 | Msa0189930:intron | 40.0% |
| GTCCAACCCCAATTATAAGA+TGG | + | chr2_1:5378471-5378490 | Msa0189930:intron | 40.0% | |
| GACCATCTTATAATTGGGGT+TGG | - | chr2_1:5378476-5378495 | None:intergenic | 40.0% | |
| CCTGGAGAAAAACATGGATA+AGG | - | chr2_1:5378679-5378698 | None:intergenic | 40.0% | |
| ! | CCTTATCCATGTTTTTCTCC+AGG | + | chr2_1:5378676-5378695 | Msa0189930:intron | 40.0% |
| ATCGTCGGAGAATATATTCC+TGG | - | chr2_1:5378697-5378716 | None:intergenic | 40.0% | |
| AGGAATATATTCTCCGACGA+TGG | + | chr2_1:5378696-5378715 | Msa0189930:intron | 40.0% | |
| CTTCATTCAACTGACAGTTG+AGG | + | chr2_1:5379024-5379043 | Msa0189930:intron | 40.0% | |
| !! | GACTGACTCTGAGATGAGAT+GGG | - | chr2_1:5374802-5374821 | None:intergenic | 45.0% |
| GTTAATGGAGAGACGAGATG+AGG | - | chr2_1:5374881-5374900 | None:intergenic | 45.0% | |
| GGAGTACGAAATTTGGAGAG+TGG | - | chr2_1:5374960-5374979 | None:intergenic | 45.0% | |
| !! | CTAGCATAGGTTTGGTGCAT+TGG | - | chr2_1:5374981-5375000 | None:intergenic | 45.0% |
| CAATGCACCAAACCTATGCT+AGG | + | chr2_1:5374979-5374998 | Msa0189930:CDS | 45.0% | |
| CCCACACAAAGGTTTGCATA+TGG | + | chr2_1:5375716-5375735 | Msa0189930:intron | 45.0% | |
| TTCACTCATCTAGGTCGGTT+TGG | + | chr2_1:5375767-5375786 | Msa0189930:intron | 45.0% | |
| ATATGTGTGCATGTGCATCC+CGG | + | chr2_1:5375846-5375865 | Msa0189930:intron | 45.0% | |
| ACTCCTCCACATGTACTATG+GGG | + | chr2_1:5376027-5376046 | Msa0189930:intron | 45.0% | |
| CCAAAGAATAGAGGGATGTG+AGG | - | chr2_1:5376067-5376086 | None:intergenic | 45.0% | |
| CCTCACATCCCTCTATTCTT+TGG | + | chr2_1:5376064-5376083 | Msa0189930:intron | 45.0% | |
| CACAAAGTCGATCGTACCTA+AGG | - | chr2_1:5376259-5376278 | None:intergenic | 45.0% | |
| ! | GGTACGATCGACTTTGTGAA+TGG | + | chr2_1:5376261-5376280 | Msa0189930:intron | 45.0% |
| TAAACTCCAGCATGTTCTGG+TGG | + | chr2_1:5376795-5376814 | Msa0189930:intron | 45.0% | |
| CATTTCCCTCTTGCTTAACG+CGG | - | chr2_1:5377041-5377060 | None:intergenic | 45.0% | |
| AGCTTAGAGTCTCCAAAGCT+GGG | + | chr2_1:5377112-5377131 | Msa0189930:CDS | 45.0% | |
| AATAGAACTCACCCCAGCTT+TGG | - | chr2_1:5377127-5377146 | None:intergenic | 45.0% | |
| GACAGGGTCCTACTTTCAAT+AGG | - | chr2_1:5377445-5377464 | None:intergenic | 45.0% | |
| TACTGTTGAGAGTCCCACAT+CGG | + | chr2_1:5377875-5377894 | Msa0189930:intron | 45.0% | |
| ! | GCCCAACCCAAATTCTAAGA+TGG | + | chr2_1:5377907-5377926 | Msa0189930:intron | 45.0% |
| TATCTGGTGCATGATCTGAG+TGG | - | chr2_1:5377976-5377995 | None:intergenic | 45.0% | |
| GCTCCACGTCAGAATAGATA+TGG | + | chr2_1:5378028-5378047 | Msa0189930:intron | 45.0% | |
| CCCCTACAAATGAGCTTCTA+AGG | - | chr2_1:5378090-5378109 | None:intergenic | 45.0% | |
| TGGAAAGACATTGTTGGGAC+CGG | - | chr2_1:5378152-5378171 | None:intergenic | 45.0% | |
| ACACCATTCACCATACAAGC+CGG | + | chr2_1:5378428-5378447 | Msa0189930:intron | 45.0% | |
| !! | AAACCGGCTTGTATGGTGAA+TGG | - | chr2_1:5378434-5378453 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+TGG | - | chr2_1:5378441-5378460 | None:intergenic | 45.0% |
| !! | CCATACAAGCCGGTTTTGTA+AGG | + | chr2_1:5378438-5378457 | Msa0189930:intron | 45.0% |
| ! | TGGTGTTGAAGAACCATCGT+CGG | - | chr2_1:5378712-5378731 | None:intergenic | 45.0% |
| GGTCTCTAGGTTCAACATCA+TGG | - | chr2_1:5378851-5378870 | None:intergenic | 45.0% | |
| GGTCTCTAGGTTCAACATCA+TGG | - | chr2_1:5378851-5378870 | None:intergenic | 45.0% | |
| CAACTGACAGTTGAGGTTCT+CGG | + | chr2_1:5379031-5379050 | Msa0189930:intron | 45.0% | |
| !!! | TTCTTTTATAGGCGTTGGCC+AGG | + | chr2_1:5379457-5379476 | Msa0189930:intron | 45.0% |
| AGTGATCCCTATCTCACTAC+AGG | + | chr2_1:5379617-5379636 | Msa0189930:intron | 45.0% | |
| GTGATCCCTATCTCACTACA+GGG | + | chr2_1:5379618-5379637 | Msa0189930:intron | 45.0% | |
| TGGAAAACCTTCCCTGAACA+AGG | + | chr2_1:5379648-5379667 | Msa0189930:CDS | 45.0% | |
| GGAAAACCTTCCCTGAACAA+GGG | + | chr2_1:5379649-5379668 | Msa0189930:CDS | 45.0% | |
| TCAAAACCCTTGTTCAGGGA+AGG | - | chr2_1:5379658-5379677 | None:intergenic | 45.0% | |
| !! | ATATTATATAATAATATCTT+TGG | - | chr2_1:5377812-5377831 | None:intergenic | 5.0% |
| !! | TGACTCTGAGATGAGATGGG+TGG | - | chr2_1:5374799-5374818 | None:intergenic | 50.0% |
| !! | CGACTGACTCTGAGATGAGA+TGG | - | chr2_1:5374803-5374822 | None:intergenic | 50.0% |
| AGACGAGATGAGGAATGAGG+CGG | - | chr2_1:5374871-5374890 | None:intergenic | 50.0% | |
| GAGAGACGAGATGAGGAATG+AGG | - | chr2_1:5374874-5374893 | None:intergenic | 50.0% | |
| CTGCAACCCTAGCATAGGTT+TGG | - | chr2_1:5374989-5375008 | None:intergenic | 50.0% | |
| !! | TCTTCTACGATTGGTGGTGG+TGG | - | chr2_1:5375017-5375036 | None:intergenic | 50.0% |
| ATGTGTCAGGTGGTAGACAC+CGG | + | chr2_1:5375095-5375114 | Msa0189930:intron | 50.0% | |
| TCAGGCTCATTTACCCGAAG+AGG | - | chr2_1:5375234-5375253 | None:intergenic | 50.0% | |
| CGCTTAAGCCCCTGATAATC+AGG | - | chr2_1:5375252-5375271 | None:intergenic | 50.0% | |
| ! | TTGATGGACCATAGGTGCAC+AGG | - | chr2_1:5375747-5375766 | None:intergenic | 50.0% |
| CTCCTCCACATGTACTATGG+GGG | + | chr2_1:5376028-5376047 | Msa0189930:intron | 50.0% | |
| TCCTCCACATGTACTATGGG+GGG | + | chr2_1:5376029-5376048 | Msa0189930:intron | 50.0% | |
| TATGCCCCCCATAGTACATG+TGG | - | chr2_1:5376036-5376055 | None:intergenic | 50.0% | |
| ATCTAGCCACCAGAACATGC+TGG | - | chr2_1:5376804-5376823 | None:intergenic | 50.0% | |
| GAGCTTAGAGTCTCCAAAGC+TGG | + | chr2_1:5377111-5377130 | Msa0189930:CDS | 50.0% | |
| GCTTAGAGTCTCCAAAGCTG+GGG | + | chr2_1:5377113-5377132 | Msa0189930:CDS | 50.0% | |
| GGGCATAACTCATCCGATGT+GGG | - | chr2_1:5377891-5377910 | None:intergenic | 50.0% | |
| TGGGCATAACTCATCCGATG+TGG | - | chr2_1:5377892-5377911 | None:intergenic | 50.0% | |
| TCCAAGATCCATTGGGCTAC+TGG | + | chr2_1:5377942-5377961 | Msa0189930:intron | 50.0% | |
| ACCAGTAGCCCAATGGATCT+TGG | - | chr2_1:5377946-5377965 | None:intergenic | 50.0% | |
| CCAGATAACCAGTAGCCCAA+TGG | - | chr2_1:5377953-5377972 | None:intergenic | 50.0% | |
| ! | CCATTGGGCTACTGGTTATC+TGG | + | chr2_1:5377950-5377969 | Msa0189930:intron | 50.0% |
| GTGTGTTGAGAGTCCCACAT+CGG | + | chr2_1:5378583-5378602 | Msa0189930:intron | 50.0% | |
| TGTGTTGAGAGTCCCACATC+GGG | + | chr2_1:5378584-5378603 | Msa0189930:intron | 50.0% | |
| GAGAGCCCTGTAGTGAGATA+GGG | - | chr2_1:5379626-5379645 | None:intergenic | 50.0% | |
| TGAGAGCCCTGTAGTGAGAT+AGG | - | chr2_1:5379627-5379646 | None:intergenic | 50.0% | |
| TCTCACTACAGGGCTCTCAT+TGG | + | chr2_1:5379628-5379647 | Msa0189930:intron | 50.0% | |
| TGCAGCTGCAACCCTAGCAT+AGG | - | chr2_1:5374994-5375013 | None:intergenic | 55.0% | |
| AGGGGCAGTGCCAAAGAACA+GGG | - | chr2_1:5375204-5375223 | None:intergenic | 55.0% | |
| TACCCGAAGAGGCGAATCGA+GGG | - | chr2_1:5375223-5375242 | None:intergenic | 55.0% | |
| TTACCCGAAGAGGCGAATCG+AGG | - | chr2_1:5375224-5375243 | None:intergenic | 55.0% | |
| !! | TGGAAGTGCCTGTGCACCTA+TGG | + | chr2_1:5375736-5375755 | Msa0189930:intron | 55.0% |
| TTGCGCCGCGTTAAGCAAGA+GGG | + | chr2_1:5377033-5377052 | Msa0189930:CDS | 55.0% | |
| ATGCACCAGATACCCAGTCC+TGG | + | chr2_1:5377984-5378003 | Msa0189930:intron | 55.0% | |
| TGCACCAGATACCCAGTCCT+GGG | + | chr2_1:5377985-5378004 | Msa0189930:intron | 55.0% | |
| TCCATTGGGCTGCCTGCTAT+TGG | + | chr2_1:5378513-5378532 | Msa0189930:intron | 55.0% | |
| CCATTGGGCTGCCTGCTATT+GGG | + | chr2_1:5378514-5378533 | Msa0189930:intron | 55.0% | |
| TCGACGAGTAGCCCAATAGC+AGG | - | chr2_1:5378528-5378547 | None:intergenic | 55.0% | |
| GTCGATACGCACCAGATGTG+CGG | + | chr2_1:5378543-5378562 | Msa0189930:intron | 55.0% | |
| GTCCCACATCGGGTGAGATA+TGG | + | chr2_1:5378594-5378613 | Msa0189930:intron | 55.0% | |
| GGCCATATCTCACCCGATGT+GGG | - | chr2_1:5378599-5378618 | None:intergenic | 55.0% | |
| CAACACCAGACGAAGCTGCA+TGG | + | chr2_1:5378724-5378743 | Msa0189930:CDS | 55.0% | |
| GATTGCCATGCAGCTTCGTC+TGG | - | chr2_1:5378732-5378751 | None:intergenic | 55.0% | |
| AGCTGCATGGCAATCAGTGC+AGG | + | chr2_1:5378737-5378756 | Msa0189930:CDS | 55.0% | |
| TACTTCCCGTCGAGCATACC+TGG | - | chr2_1:5379478-5379497 | None:intergenic | 55.0% | |
| TGAGATGGGTGGCTGTCTGC+TGG | - | chr2_1:5374788-5374807 | None:intergenic | 60.0% | |
| CGAGATGAGGAATGAGGCGG+CGG | - | chr2_1:5374868-5374887 | None:intergenic | 60.0% | |
| GAGGGGCAGTGCCAAAGAAC+AGG | - | chr2_1:5375205-5375224 | None:intergenic | 60.0% | |
| ! | TGCCCCTCGATTCGCCTCTT+CGG | + | chr2_1:5375217-5375236 | Msa0189930:CDS | 60.0% |
| ACCCGAAGAGGCGAATCGAG+GGG | - | chr2_1:5375222-5375241 | None:intergenic | 60.0% | |
| GCCCCCCATAGTACATGTGG+AGG | - | chr2_1:5376033-5376052 | None:intergenic | 60.0% | |
| CTTGCGCCGCGTTAAGCAAG+AGG | + | chr2_1:5377032-5377051 | Msa0189930:CDS | 60.0% | |
| CATGCCCAGGACTGGGTATC+TGG | - | chr2_1:5377992-5378011 | None:intergenic | 60.0% | |
| GATACCCAGTCCTGGGCATG+AGG | + | chr2_1:5377992-5378011 | Msa0189930:intron | 60.0% | |
| ACCTCCTCATGCCCAGGACT+GGG | - | chr2_1:5377999-5378018 | None:intergenic | 60.0% | |
| TACCTCCTCATGCCCAGGAC+TGG | - | chr2_1:5378000-5378019 | None:intergenic | 60.0% | |
| CGACATACCTCCTCATGCCC+AGG | - | chr2_1:5378005-5378024 | None:intergenic | 60.0% | |
| GCAGGCAGCCCAATGGATCA+TGG | - | chr2_1:5378510-5378529 | None:intergenic | 60.0% | |
| CCCAATAGCAGGCAGCCCAA+TGG | - | chr2_1:5378517-5378536 | None:intergenic | 60.0% | |
| AACACACCCCTCTCACGCTC+AGG | - | chr2_1:5378570-5378589 | None:intergenic | 60.0% | |
| GGGCCATATCTCACCCGATG+TGG | - | chr2_1:5378600-5378619 | None:intergenic | 60.0% | |
| CGTTGGCCAGGTATGCTCGA+CGG | + | chr2_1:5379469-5379488 | Msa0189930:CDS | 60.0% | |
| GTTGGCCAGGTATGCTCGAC+GGG | + | chr2_1:5379470-5379489 | Msa0189930:CDS | 60.0% | |
| GGGTGGCTGTCTGCTGGACA+CGG | - | chr2_1:5374782-5374801 | None:intergenic | 65.0% | |
| GGAGGAGGAGGAGAGGAGAG+TGG | - | chr2_1:5374844-5374863 | None:intergenic | 65.0% | |
| GATGAGGAATGAGGCGGCGG+CGG | - | chr2_1:5374865-5374884 | None:intergenic | 65.0% | |
| ! | GCCCCTCGATTCGCCTCTTC+GGG | + | chr2_1:5375218-5375237 | Msa0189930:CDS | 65.0% |
| ACCCAGTCCTGGGCATGAGG+AGG | + | chr2_1:5377995-5378014 | Msa0189930:intron | 65.0% | |
| CACGCTCAGGACCGCACATC+TGG | - | chr2_1:5378557-5378576 | None:intergenic | 65.0% | |
| TGTGCGGTCCTGAGCGTGAG+AGG | + | chr2_1:5378559-5378578 | Msa0189930:intron | 65.0% | |
| GTGCGGTCCTGAGCGTGAGA+GGG | + | chr2_1:5378560-5378579 | Msa0189930:intron | 65.0% | |
| TGCGGTCCTGAGCGTGAGAG+GGG | + | chr2_1:5378561-5378580 | Msa0189930:intron | 65.0% | |
| GAATGAGGCGGCGGCGGAGG+AGG | - | chr2_1:5374859-5374878 | None:intergenic | 75.0% | |
| GAGGAATGAGGCGGCGGCGG+AGG | - | chr2_1:5374862-5374881 | None:intergenic | 75.0% | |
| ! | CGGCGGCGGAGGAGGAGGAG+AGG | - | chr2_1:5374851-5374870 | None:intergenic | 80.0% |
| ! | TGAGGCGGCGGCGGAGGAGG+AGG | - | chr2_1:5374856-5374875 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 5374750 | 5379677 | 5374750 | ID=Msa0189930;Name=Msa0189930 |
| chr2_1 | mRNA | 5374750 | 5379677 | 5374750 | ID=Msa0189930-mRNA-1;Parent=Msa0189930;Name=Msa0189930-mRNA-1;_AED=0.28;_eAED=0.28;_QI=157|0.85|0.75|0.87|0.85|0.75|8|0|252 |
| chr2_1 | exon | 5374750 | 5374808 | 5374750 | ID=Msa0189930-mRNA-1:exon:2412;Parent=Msa0189930-mRNA-1 |
| chr2_1 | exon | 5374829 | 5375052 | 5374829 | ID=Msa0189930-mRNA-1:exon:2413;Parent=Msa0189930-mRNA-1 |
| chr2_1 | exon | 5375171 | 5375384 | 5375171 | ID=Msa0189930-mRNA-1:exon:2414;Parent=Msa0189930-mRNA-1 |
| chr2_1 | exon | 5376968 | 5377134 | 5376968 | ID=Msa0189930-mRNA-1:exon:2415;Parent=Msa0189930-mRNA-1 |
| chr2_1 | exon | 5377273 | 5377397 | 5377273 | ID=Msa0189930-mRNA-1:exon:2416;Parent=Msa0189930-mRNA-1 |
| chr2_1 | exon | 5378698 | 5378758 | 5378698 | ID=Msa0189930-mRNA-1:exon:2417;Parent=Msa0189930-mRNA-1 |
| chr2_1 | exon | 5379468 | 5379494 | 5379468 | ID=Msa0189930-mRNA-1:exon:2418;Parent=Msa0189930-mRNA-1 |
| chr2_1 | exon | 5379639 | 5379677 | 5379639 | ID=Msa0189930-mRNA-1:exon:2419;Parent=Msa0189930-mRNA-1 |
| chr2_1 | five_prime_UTR | 5374750 | 5374808 | 5374750 | ID=Msa0189930-mRNA-1:five_prime_utr;Parent=Msa0189930-mRNA-1 |
| chr2_1 | five_prime_UTR | 5374829 | 5374926 | 5374829 | ID=Msa0189930-mRNA-1:five_prime_utr;Parent=Msa0189930-mRNA-1 |
| chr2_1 | CDS | 5374927 | 5375052 | 5374927 | ID=Msa0189930-mRNA-1:cds;Parent=Msa0189930-mRNA-1 |
| chr2_1 | CDS | 5375171 | 5375384 | 5375171 | ID=Msa0189930-mRNA-1:cds;Parent=Msa0189930-mRNA-1 |
| chr2_1 | CDS | 5376968 | 5377134 | 5376968 | ID=Msa0189930-mRNA-1:cds;Parent=Msa0189930-mRNA-1 |
| chr2_1 | CDS | 5377273 | 5377397 | 5377273 | ID=Msa0189930-mRNA-1:cds;Parent=Msa0189930-mRNA-1 |
| chr2_1 | CDS | 5378698 | 5378758 | 5378698 | ID=Msa0189930-mRNA-1:cds;Parent=Msa0189930-mRNA-1 |
| chr2_1 | CDS | 5379468 | 5379494 | 5379468 | ID=Msa0189930-mRNA-1:cds;Parent=Msa0189930-mRNA-1 |
| chr2_1 | CDS | 5379639 | 5379677 | 5379639 | ID=Msa0189930-mRNA-1:cds;Parent=Msa0189930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
